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Bioengineering and Management for Efficient Phosphorus Utilization In

Bioengineering and Management for Efficient Phosphorus Utilization In

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Bioengineering and management for efficient

utilization in crops and pastures

1 1 2 3 1

Jiang Tian , Xiurong Wang , Yiping Tong , Xinping Chen and Hong Liao

Phosphorus (P) is one of the three macronutrients for plants. critical to develop ‘smart’ crop cultivars with high P

Because of its low mobility and high fixation in soils, low P efficiency (PE), defined as the ability to grow and yield

availability is a worldwide constraint for crop productivity. in soils with reduced P availability [4]. Sustainable

Molecular biology provides great opportunities to improve P increases in crop yield with efficient utilization of irre-

efficiency in plants. However, transgenic plants cannot be placeable P resources will entail better management and

commercialized before integrating all the knowledge on development of cultivars with high P efficiency.

bottlenecks for improving P efficiency of crops/pastures. This

review intends to summarize the main strategies of With the development of biotechnology, more and more

bioengineering to improve P efficiency of crops/pastures, biotech crops have been commercialized and their plant-

including conventional and molecular assisted breeding, ing areas have dramatically increased from 1.7 to 148

identification and application of key for biotech plants. It million hectares between 1996 and 2010, which stands in

highlights recent advances in the understanding of improving P contrast to the nearly constant total area of crops

efficiency through the integration of bioengineering with P (Figure 1), showing the increasing contribution of biotech

fertilization and cultivation management. crops to modern agriculture. However, most commercia-

Addresses lized biotech crops are developed to resist insects and/or

1

State Key Laboratory for Conservation and Utilization of Subtropical herbicides. Little progress has been made for nutrient

Agro-bioresources, Root Biology Center, South China Agricultural efficiency, especially for PE due to its complexity. Here,

University, Guangzhou 510642, China

2 we highlight the recent progress on facilitating P utiliz-

State Key Laboratory for Plant Cell and Chromosome Engineering,

ation in crops/pastures through conventional and molecu-

Institute of Genetics and Developmental Biology, Chinese Academy of

Sciences, Beijing 100101, China lar assisted breeding, biotechnology, P fertilization, and

3

Department of Plant Nutrition, China Agricultural University, Beijing, cultivation management.

100193, China

Corresponding author: Liao, Hong ([email protected]) Improving P efficiency via conventional and

marker assisted selection breeding

It is well documented that genetic variations for PE exist

Current Opinion in Biotechnology 2012, 23:1–6

among plant species and genotypes within a species,

This review comes from a themed issue on indicating that it is possible to improve plant PE through

Phosphorous Biotechnology conventional and marker assisted selection (MAS) breed-

Edited by Lars Blank and Andrew Shilton

ing. MAS is a process using markers (morphological,

biochemical or one based on DNA/RNA variation) to

select the traits of interest during breeding. Root traits

0958-1669/$ – see front matter

are thought to be crucial for P uptake. This ‘root breed-

# 2012 Elsevier Ltd. All rights reserved.

ing’ strategy has proven effective in improving PE of

some crops (e.g. soybean) [5]. In order to overcome

DOI 10.1016/j.copbio.2012.03.002

limitations of genetic variations within the same species,

transferring alien genes from other species even pastures

Introduction to crops through chromosome engineering is an effective

It is always a critical challenge for the agricultural sector to approach in improving PE of crops. For example, wheat

feed the increasing population. In recent years, world lines carrying 1BL/1RS, 1AL/1RS or 1DL/1RS wheat–rye

primary crop area has held steady due to the shortage of chromosomal translocations (the long arm of wheat

arable land reserves (Figure 1). Therefore, the annual chromosomes 1A, 1B, and 1D is replaced by the short

consumption of global chemical fertilizers has to be arm of rye chromosome 1R, respectively) exhibited

increased to meet the huge demands for food. Since increased PE and higher yield [6]. However, the root

phosphorus (P) fertilizer is mainly produced from dwind- traits associated with PE are hidden in soils, therefore root

ling supplies of the non-renewable resource, phosphate breeding through conventional phenotype selection is

(Pi) rock [1,2], increased consumption of P fertilizers time consuming and complicated. MAS breeding might

cannot keep pace with increased utilization of total be better as demonstrated by recent achievements in



chemical fertilizers (Figure 1). Furthermore, due to its [7 ]. Through the major quantitative trait locus (QTL)

low mobility and high fixation in soils, low P availability is controlling P uptake, phosphorus uptake1 (Pup1), improved

a worldwide constraint for crop growth [3]. Therefore, it is PE and yield of rice genotypes have been successfully

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2 Phosphorous Biotechnology

Figure 1

1500 180

Primary crop Total fertilzers

Biotec h crop P fertilizer 170 1400 160 1300 150 1200 140

1100 130 200 50

40 150 30

Crop area (million hectares) Crop area (million 100 20 Fertilizer consumption (million tons) consumption (million Fertilizer 50 10

0 0 1996 1998 2000 2002 2004 2006 2008 2010 Year

Current Opinion in Biotechnology

World primary crop and biotech crop planting area, along with global annual consumption of total chemical fertilizers and P fertilizer over the period

from 1996 to 2010. World primary crop area was the total planting area of main crops. The total chemical fertilizers were the sum of fertilizer N, P and K.

(Data of GM crops are from http://www.isaaa.org/resources/publications/pocketk/16/default.asp. The other data are from FAOSTAT [http://

faostat.fao.org/], accessed January 10, 2012).

developed. However, most identified QTLs made small regulation of root hair development and enhanced gly-

contributions to PE, and thus were impractical for MAS cerophosphodiester turnover [13]. Many other genes have

breeding [8,9]. been identified to mediate root architectural changes in

crops and pastures, such as crown rootless 5 (OsCRL5) and



Improving P efficiency via transgenic expansin 17 (OsEXPA17) in rice [14,15 ], but they need to

modification be tested for any contributions to improving PE. There-

Plants have evolved multiple adaptations to low P avail- fore, while progress has been realized, improving PE

ability for efficient utilization of P from soils. Under- through transgenic modification of root architecture has

standing the mechanisms and identifying genes involved a long way to go.

in these adaptations promises to facilitate improvement of

PE in crops and pastures through transgenic modification. Releasing Pi from insoluble P pools in rhizosphere

Since over 99% of soil P exists as poorly available forms to

Optimizing root architecture for Pi acquisition plants [16], an important trait for optimal PE complemen-

Because of the immobility and heterogeneous distri- tary to the development of optimal root architecture is the

bution of Pi in soils, root architecture traits that establish ability to stimulate release of Pi from insoluble P pools in

the framework of root system and enhance topsoil fora- the rhizosphere. It has been well documented that

+

ging are particularly important for Pi acquisition secreted protons (H ), organic acids (OAs) and phospha-

(Figure 2) [4]. The architectural traits mainly include tases play vital roles for plants to mobilize and utilize the

shallower root angles, enhanced adventitious rooting and fixed P in soils (Figure 2).

lateral root branching, greater root hair density, and more

+ +

cluster root formation [4,10,11]. However, the underlying Since H -ATPases mediate ATP-dependent H extru-

molecular mechanisms of root architecture adaptation to sion to the extracellular space, the genes affecting

+ +

P deficiency remain unclear [4,5]. Recently, a b-expansin H -ATPases should be crucial for H secretion from roots,

, GmEXPB2 from soybean was shown to be critical as well as subsequent P acquisition. In support of this,

+

for regulating root architecture responses to Pi starvation knockout of OsA8, a P-type H -ATPase gene, which

+

in crops, and overexpressing GmEXPB2 could success- affected transcripts of several other H -ATPases, inhibited



fully improve PE in soybean [12 ]. In pasture plants, P acquisition in rice mutants [17].

two glycerophosphodiester genes, LaGPX-

PDE1 and LaGPX-PDE2 from white lupin, were reported It is generally assumed that secreted OAs could mobilize

to participate in acclimation to P deficiency through the insoluble P through both rhizosphere acidification and

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Bioengineering and management for efficient phosphorus utilization Tian et al. 3

Figure 2

1. Optimizing root architecture for Pi acquisition

(GmEXPB2, LaGPX-PDE1,LaGPX-PDE2)

Pi 2. Releasing Pi from insoluble P pools

(OsA8 , PoMDH, TaALMT1, PvPAP3)

Pht1 3. Enhancing expression of high affinity Pi PHR1

SPX1 transporter (OsP ht1:2,OsPht1:8)

Pi 4. Modifyin g regulators in P signaling network

PTF1

Ca-P (OsPTF1 ,OsPHR2,OsSPX1,ath-miR399d) H+

Fe-P ATPase

EXPB2 EXPB2

Al-P Malate Organic P (Phytate, ATP) APase MT1 MDH, CS CS MDH, Pi Pi

Pi Pi Pht1 Pht1

Current Opinion in Biotechnology

A model for improved P efficiency in crops and pastures through transgenic engineering. The genes in parenthesis have been used in transgenic

modification for improving P efficiency in crops, pastures. The first two letters of the gene label represent the abbreviated species name, except ath-

miR399d from Arabidopsis. Os: Oryza sativa; La: Lupinus albus; Po: Penicillium oxalicum; Ta: Triticum aestivum; Pv: Phaseolus vulgaris.

chelation of metal ions, and that this process is mainly enhance phytate-P utilization in crops and pasture plants

determined by activities of OA transporters and enzymes through genetic modification.

for OA metabolism, such as phosphoenolpyruvate

carboxylase (PEPC), malate dehydrogenase (MDH), Enhancing expression of high affinity Pi transporter

and citrate synthase (CS) [18]. A number of reports Phosphate acquisition and translocation in plants are

provided support for OA roles in improved P acquisition mediated by Pi transporters (PT). Among them, members

from insoluble sources through overexpression of OA from the high affinity PT family, Pht1, mainly function in

related genes, such as PoMDH from Penicillium oxalicum Pi acquisition from soils and translocation from roots to

in tobacco and aluminum activated malate transporter1 from other parts of plants [28]. Although overexpressing

Triticum aestivum (TaALMT1) in barley [19,20]. These NtPht1;1, OsPht1;2 or OsPht1;8 facilitated Pi acquisition

results indicated that some OA-related genes might be in transgenic rice plants, their biomass and yield were not

useful for biotech improvement of PE. coincidently improved due to the toxicity of excess P at

high P level [29–31], suggesting that overexpressing Pht1

Organic P often accounts for 30–70% of total soil P, which in crops should be integrated with soil/farm management

is not directly available to plants unless hydrolyzed by in order to improve crop PE (Figure 2).

[21]. Enhanced exudation and activities of

phosphatases, therefore, become potential hotspots for Modifying regulators in P signaling network

improving PE through genetic engineering. It has been Plant responses to P deficiency are coordinately regulated

documented that overexpressing the purple acid phospha- by an elaborate signaling network involving many actors,

tase 3, PvPAP3 in bean results in increased utilization of including phytohormones, sugars, miRNAs, transcription

 

extracellular ATP [22 ]. In addition, another class of factors, and other regulators [32 ]. Among these partici-

enzymes, phytases from microorganisms and plants has pants, miRNAs, SPX (SYG/PHO81/XPR1) domain con-

been used to improve phytate-P utilization in crops and taining , and several transcription factors are

pasture plants. Instances of this strategy include over- major components for regulating P homeostasis in plants

expression of a phytase gene, phyA from Aspergillus niger in [33]. Interestingly, overexpression of a transcription fac-

cotton [23], EcappA from in potato [24], tor, PTF1 (Pi starvation induced transcription factor 1),

 

AtPAP15 from Arabidopsis in soybean [25 ], MtPHY1 and enhanced PE in both rice and maize [34,35 ]

MtPAP1 from Medicago truncatula in clover [26], and (Figure 2). Conversely, overexpressing a transcription

LASAP2 from white lupin in tobacco [27], suggesting factor, phosphate starvation response 2 (OsPHR2), a major

that increased activities of root secreted phytases could component in P signaling pathways in rice, resulted in

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4 Phosphorous Biotechnology

increased P concentration but inhibited plant growth, and lack of genetic variability severely inhibit wide

which might be caused by excessive P amounts in leaves application of conventional and MAS breeding to improve

[36]. Similar results were also observed in modifying SPX PE. Although these problems could be solved using

and miR399. Suppressing OsSPX1 in rice, and overex- genetic engineering techniques, selecting the suitable

pressing ath-miR399d from Arabidopsis in tomato led to candidate genes is a big challenge, and also the suitable

excessive P accumulation in leaves, and subsequently candidate genes might be variety or species dependent.



inhibited plant growth [37 ,38]. Therefore, improving PE Additionally, P fertilization management could affect

through transforming the critical genes in P signaling dynamics of rhizosphere P, and subsequently affect P

networks requires more insights into the physiological acquisition efficiency in plants. Moreover, competition

and molecular connections between components. might also influence the P uptake of intercropped species.

Therefore, more intensive studies are required to further

Improving P efficiency via better P fertilization elucidate the critical procedures mediating superior PE in

and cultivation management plants and P fertilization as well as cultivation manage-

To feed the increasing population, large-scale fertiliza- ment in the field.

tion and excessive consumption of natural P resources are

increasing, and thus result in severe environmental pro- In conclusion, through integration of breeding, genetic

blems [39]. Improving P utilization only from the plant engineering, P fertilization and cultivation management,

side is not enough to optimize P utilization and solve the optimum PE and productivity of crops/pastures can be

environmental problems caused by soil P accumulation. synchronously achieved with the better understanding of

For this, soil-testing based upon ‘building-up and main- plants, soils and management.

tenance’ was developed and widely used in developed

countries and some fast developing countries (e.g. China) Acknowledgements

The authors acknowledge Dr Thomas Walk for critical reading, Dr Xing Lu

[40]. The principle of this approach is to adjust soil P

for preparing Figure 1, and financial supports from the National Natural

levels from those threatening environmental damage or P

Science Foundation of China (Grant Nos. 30890130 and 31025022) and

deficiency to the levels ensuring stable crop yield. This National Key Basic Research Special Funds of China (2011CB100301).

method is particularly useful for controlling high soil P

accumulation and reducing environmental risks. The References and recommended reading

Papers of particular interest, published within the period of review,

rhizosphere-based P management is an alternative

have been highlighted as:

approach to improve PE and crop yield through exploita-

tion of biological potentials for efficient mobilization and  of special interest

 of outstanding interest

acquisition of P by crops, and reducing the overreliance

on application of chemical fertilizer P [41]. The match

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Bioengineering and management for efficient phosphorus utilization Tian et al. 5

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source. These results suggest that PvPAP3 might function in the adapta- In the study, suppression of OsSPX1 resulted in over-accumulation of

tion of bean to P deficiency, possibly through enhancing utilization of phosphate in rice. However, overexpression of OsSPX1 suppressed

extracellular ATP as a P source. expression levels of 10 phosphate starvation-induced genes in rice.

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6 Phosphorous Biotechnology

These results suggest that OsSPX1 acts via a negative feedback loop to 42. Jing J, Rui Y, Zhang F, Rengel Z, Shen J: Localized application

optimize growth under phosphate-limited conditions. of phosphorus and ammonium improves growth of

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phosphorus management for crop and environmental in

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information on phosphorus status and root behavior of neighboring

plants. This study provides new insights into the dynamics and complex-

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ity of root behavior and kin recognition among crop species in response to

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156:997-1005. nutrient status and neighboring plants.

Current Opinion in Biotechnology 2012, 23:1–6 www.sciencedirect.com

Please cite this article in press as: Tian J, et al.. Bioengineering and management for efficient phosphorus utilization in crops and pastures, Curr Opin Biotechnol (2012), doi:10.1016/ j.copbio.2012.03.002