Chapter 28: Protists
1. General Features of Protists 2. Survey of the Protista A. The Excavata B. The SAR Clade C. The Archaeplastida D. The Unikonta 1. General Features of Protists All Protists are Eukaryotes Eukaryotic organisms consist of 1 or more eukaryotic cells: Prokaryotic cell • eukaryotic cells contain a “true nucleus” and other membrane- bound organelles
Nucleus Most eukaryotes are single-celled organisms, most of which are protists (i.e., not fungi, plants or animals).
Eukaryotic cell Organelles Protists have Diverse Characteristics
Protists are much more diverse that plants, animals & fungi:
• most are unicellular, though some are multicellular
• some are photoautotrophs (commonly called “algae”)
• some are chemoheterotrophs (commonly called “protozoa”)
• some have characteristics of both (mixotrophs)
• protists can reproduce sexually, asexually, or both Endosymbiosis in Eukaryotic Evolution Plasma membrane The endosymbiont theory proposes Cytoplasm that mitochondria & chloroplasts are DNA derived from internalized prokaryotes. Ancestral prokaryote Nucleus Endoplasmic Photosynthetic reticulum prokaryote
Mitochondrion Nuclear envelope
Aerobic heterotrophic prokaryote
Mitochondrion Plastid
Ancestral Ancestral photosynthetic heterotrophic eukaryote eukaryote A Closer Look at Plastid Evolution
Dinoflagellates Membranes Secondary are represented endosymbiosis as dark lines in the cell. Red alga Cyanobacterium Plastid
1 2 3 Primary endosymbiosis Stramenopiles
Nucleus Secondary Plastid Heterotrophic endosymbiosis eukaryote One of these membranes was lost in Euglenids red and green algal descendants. Secondary endosymbiosis Green alga
Chlorarachniophytes Protists No Longer Constitute a Single Kingdom
The traditional grouping of eukaryotes involved 4 kingdoms: PROTISTA FUNGI PLANTAE ANIMALIA
However this is not consistent with phylogenies based on recent molecular analysis which supports the following 4 supergroups… Figure 28.2 ■ Excavata 5 μm Diplomonads Excavata Parabasalids 4 Supergroups
Euglenozoans Stramenopiles ■ “SAR” Clade 50 μm Diatoms The evolutionary Golden algae
Brown algae Giardia intestinalis, history of all “SAR” clade “SAR”
Alveolates Dinoflagellates eukaryotes Apicomplexans currently consists Ciliates Forams
Rhizarians of 4 supergroups: Cercozoans Diatom diversity ■ Archaeplastida Radiolarians 50 μm 1. Excavata
Red algae Archaeplastida Green algae Chlorophytes 2. SAR Clade Charophytes 3. Archaeplastida Land plants Amoebozoans • includes all land plants
Slime molds Volvox, a colonial freshwater green alga Tubulinids ■ Unikonta 4. Unikonta Entamoebas Unikonta • includes fungi & animals
Nucleariids Opisthokonts Fungi All eukaryotes that are not Choanoflagellates plants, animals or fungi are Animals 100 μm considered to be Protists. A unikont amoeba 2A. Survey of the Protista The Excavata
Diplomonads Excavata
Parabasalids
Euglenozoans
SAR clade Archaeplastida Unikonta General Characteristics of Excavates
Below are some of the characteristics seen in Excavates:
• some members have an “excavated” feeding grooves that are associated with unique cytoskeletal structures • many have modified “unclassical” mitochondria • most have 2 or more flagella
• includes the following major groups:
DIPOMONADS PARABASALIDS EUGLENOZOANS Diplomonads
Diplomonads have reduced mitochondria called mitosomes and derive energy by anaerobic processes. They also have 2 nuclei and multiple flagella.
Many are parasites such as Giardia intestinalis shown here: Parabasalids Parabasalids have reduced mitochondria called hydrogenosomes and thrive in anaerobic environments. • Trichomonas vaginalis, a sexually transmitted human pathogen shown below is one example
Flagella
Undulating membrane 5 μm Euglenozoans The Euglenozoa is a diverse clade that includes predatory heterotrophs, photosynthetic autotrophs, mixotrophs, and parasites.
Flagella • a characteristic feature of this 0.2 μm clade is the crystalline rod structure within their flagella
• members of this clade include:
KINETOPLASTIDS 8 μm Crystalline rod (cross section) EUGLENIDS Ring of microtubules (cross section) Kinetoplastids Kinetoplastids have a single mitochondrion containing an unusual organized mass of DNA called a kinetoplast.
• includes the genus Trypanosoma which contains parasites that cause “sleeping sickness” and Chaga’s disease
RBC 9 μm Euglenids Euglenids have 1 or 2 flagella, and some members of this clade, such as the genus Euglena, are both autotrophic and heterotrophic
(i.e., mixotrophs). Long flagellum
Eyespot
Light Short flagellum detector Contractile vacuole
Nucleus Chloroplast
Plasma 5 μm membrane Euglena (LM) Pellicle 2B. Survey of the Protista The SAR Clade
Excavata Diatoms
Golden algae Stramenopiles SAR SAR clade Brown algae Dinoflagellates Apicomplexans Alveolates Ciliates Forams Cercozoans Rhizarians Radiolarians Archaeplastida Unikonta General Characteristics of the SAR Clade
The SAR clade is a highly diverse monophyletic supergroup based on DNA similarities that includes the following:
STRAMENOPILES
ALVEOLATES
RHIZARIANS Stramenopiles
Most members of the Stramenopile clade have both “hairy” and smooth flagella. • this clade includes the following ecologically important groups of photosynthetic
Hairy organisms: flagellum Smooth DIATOMS flagellum GOLDEN ALGAE BROWN ALGAE 5 μm and are a significantportion of Diatoms haveglass unique
40 μm • Diatoms of Dover”) “diatomaceous“whitethe cliffs (e.g., earth” whitesediments referred to as remainsmain componentstheir arethe of - like walls made ofsilicondioxide phytoplankton in the oceans. in the Flagellum Golden Algae
Outer container • contain yellow and brown carotenoids Living cell which give them their characteristic color
• typically have two flagella
• most are single- celled though some are colonial 25 μm Brown Algae
Brown algae are all multicellular and are the largest algae.
• includes many “seaweeds” Blade such as kelp
• although brown algae are Stipe not plants, many have plant-like structures shown in this image Holdfast Haploid (n) Alternation of Diploid (2n)
Sporangia Generations
• many multicellular MEIOSIS 10 cm algae have a life cycle Sporophyte similar to that of (2n) Zoospore Female plants called the Developing Gameto- “Alternation of sporophyte phytes Generations” – the Zygote (n) Mature female (2n) gametophyte Egg Male alternation between (n) FERTILIZATION multicellular haploid and diploid forms Sperm Alveolates Members of the Alveolate clade have membrane enclosed sacs called alveoli must beneath the plasma membrane.
Flagellum Alveoli • this clade includes the following:
DINOFLAGELLATES
Alveolate
APICOMPLEXANS m
μ CILIATES 0.2 0.2 Dinoflagellates Flagella
Dinoflagellates are also an (a) Dinoflagellate important component of flagella phytoplankton and have 2 flagella, one of which wraps around the cell and causes it to 3 μm rotate.
• are responsible for the algal blooms known as “red tides” (b) Red tide in the Gulf of Carpentaria in northern Australia Apicomplexans The Apicomplexans are parasites of animals that have complex life cycles with multiple hosts.
• the most significant genus in this clade is Plasmodium, the cause of malaria
• nearly 1 million people each year die from malaria Inside mosquito Inside human Merozoite Plasmodium Sporozoites (n) Liver Life Cycle
Liver cell • mosquitoes are Apex the definitive host Oocyst MEIOSIS (in which sexual Merozoite Red blood 0.5 μm cell reproduction (n) Red Zygote blood occurs) (2n) cells • humans are the
FERTILIZATION intermediate host (in which reproduction Gametes Game- is asexual) tocytes Haploid (n) (n) Diploid (2n) Ciliates The Ciliates clade is a large group characterized by cilia used for locomotion and/or feeding and 2 nuclei, one macronucleus and one micronucleus. • the genus Paramecium is a good example
Contractile • Ciliates also engage vacuole in a form of sexual Oral groove Cilia Cell mouth reproduction called 50 μm conjugation…
Micronucleus Food Macronucleus vacuoles
(a) Feeding, waste removal, and water balance. Conjugation in Ciliates
Compatible mates Conjugation Asexual MEIOSIS reproduction
Haploid Diploid micronucleus micronucleus The original macro- Diploid nucleus disintegrates. micronucleus
MICRO- NUCLEAR FUSION
(b) Conjugation and reproduction. Rhizarians The Rhizarians are mostly amoebas containing pseudopodia that are threadlike (unlike the Amoebozoa in the Unikonta clade.
• this clade includes the following:
RADIOLARIANS
FORAMS
CERCOZOANS Radiolarians Radiolarians have delicate, symmetrical endoskeletons made typically of silica.
• the pseudopodia extend from the cell to catch prey Pseudopodia
200 μm Forams Foraminiferans (“hole bearers”), or forams for short, are single- celled heterotrophs that characteristically have multi-chambered shells called tests.
• foram tests are found throughout the fossil record and their tests can be analyzed to estimate ocean temperatures in ancient times Cercozoans
Chromatophore
• most are heterotrophs, though a few such as Paulinella chromatophora are autotrophs that contain unique photosynthetic structures called chromatophores
5 μm 2C. Survey of the Protista The Archaeplastida
Excavata
SAR clade Archaeplastida Red algae
Chlorophytes Green algae Charophytes
Land plants
Unikonta The Archaeplastida
The supergroup Archaeplastida contains the following:
RED ALGAE GREEN ALGAE LAND PLANTS
• molecular and other data indicate the land plants are descendants of the green algae, though only the red and green algae are considered to be protists ► Bonnemaisonia hamifera Red Algae
20 cm The red algae contain, in addition to chlorophyll, a red accessory pigment called phycoerythrin.
• phycoerythrin absorbs non-red light 8 mm ◀ Dulse (Palmaria palmata) • many red algae live in deep water
▼ Nori where red light does not penetrate
This group includes many seaweeds some of which are edible. Green Algae
Green algae contain 2 cm (a) Ulva, or sea lettuce green chloroplasts (due to chlorophyll) and includes 2 main groups:
CHLOROPHYTES • most live in fresh water (b) Caulerpa, an intertidal CHAROPHYTES chlorophyte • closest relatives to plants Chlorophyte Life Cycle Most chlorophytes have complex life cycles with both sexual and asexual reproductive stages:
− Flagella 1 μm Cell wall + Gamete − (n) + Nucleus
Zoospore Mature cell (n) FERTILIZATION Cross ASEXUAL SEXUAL section REPRODUCTION REPRODUCTION of cup- Zygote shaped (TEM) (2n) chloroplast − +
+ − MEIOSIS Haploid (n) Diploid (2n) 2D. Survey of the Protista The Unikonta
Excavata SAR clade Archaeplastida
Slime molds
Tubulinids Unikonta
Entamoebas Amoebozoa Nucleariids Fungi Choanoflagellates
Opisthokonts Animals The Unikonta
This group contains 2 major clades:
AMOEBOZOA • all of which are protists: SLIME MOLDS TUBULINIDS ENTAMOEBAS
OPISTHOKONTS • includes animals and fungi in addition to some protists: NUCLEARIIDS CHOANOFLAGELLATES Amoebozoans
Amoebozoans have tube or lobe-shaped pseudopodia (unlike the Rhizaria).
Amoeba proteus, a tubulinid Entamoeba histolytica Slime Molds
Plasmodial slime molds form multicellular aggregates in which there is no separation of nuclei by membranes (i.e., a plasmodium), thus they are not considered to be multicellular.
Cellular slime molds form multicellular aggregates in which cells are separated by their membranes. • cells feed individually and can aggregate to migrate and form a fruiting body • species such as Dyctiostelium discoideum are studied to better understand the origins of multicellularity Spores Cellular Slime (n) FERTILIZATION Emerging Mold Life Cycle amoeba (n) SEXUAL Zygote REPRO- (2n) Solitary amoebas DUCTION 600 μm (feeding stage) MEIOSIS (n) ASEXUAL REPRODUCTION Amoebas Aggregated (n) amoebas
Fruiting Migrating aggregate bodies 200 μm (n)
Haploid (n) Diploid (2n) Zygote (2n)
Feeding FERTILIZATION plasmodium
Mature plasmodium (preparing to fruit) 4 cm Young Flagellated Amoeboid sporangium cells cells (n) (n) Mature Plasmodial sporangium Germinating spore Slime Mold Spores (n) Life Cycle MEIOSIS Stalk Haploid (n) Diploid (2n)