The Ciliated Protozoa Characterization, Classification, and Guide to the Literature

Total Page:16

File Type:pdf, Size:1020Kb

The Ciliated Protozoa Characterization, Classification, and Guide to the Literature D. Lynn The Ciliated Protozoa Characterization, Classification, and Guide to the Literature ▶ Completely revised and updated ▶ Major chapter on The Ciliate Taxa ▶ Glossary with more than 700 terms ▶ Contains hundreds of illustrations ▶ Contains both Subject and Systematic indices The third edition of The Ciliated Protozoa continues the innovative approach of the previous two editions, thoroughly documenting the progress in our understanding of the evolutionary diversification of these widely distributed eukaryotic microorganisms. 3rd ed. 2008, XXXIII, 605 p. The Glossary is considerably revised and expanded, serving as an illustrated ‘subject index’ of more than 700 terms. An introduction to the phylum is followed by chapters on the 11 classes. Each class chapter contains 7 sections: Printed book Hardcover • taxonomic structure ▶ 279,99 € | £249.99 | $349.99 • life history and ecology ▶ *299,59 € (D) | 307,99 € (A) | CHF 330.50 • somatic structures • oral structures eBook • division and morphogenesis Available from your bookstore or • nuclei, sexuality, and life cycle other features ▶ springer.com/shop • The book includes new data on the ultrastructure of the somatic cortex of each class, MyCopy molecular phylogenetics, ecology, and on other important aspects of ciliate biology. These Printed eBook for just new data are used, along with a novel conceptual approach, to rationalize a new system ▶ € | $ 24.99 of classification for the phylum, presented in a major chapter on The CiliateTaxa. The book includes an up-to-date bibliography of approximately 3,000 citations to both the ‘classical’ ▶ springer.com/mycopy and recent literature, and both a Subject Index and a Systematic Index. This unique and timely book will serve as a comprehensive and authoritative reference work for students, teachers, and researchers who have an interest in the protozoa, and particularly the ciliates. Order online at springer.com ▶ or for the Americas call (toll free) 1-800-SPRINGER ▶ or email us at: [email protected]. ▶ For outside the Americas call +49 (0) 6221-345-4301 ▶ or email us at: [email protected]. The first € price and the £ and $ price are net prices, subject to local VAT. Prices indicated with * include VAT for books; the €(D) includes 7% for Germany, the €(A) includes 10% for Austria. Prices indicated with ** include VAT for electronic products; 19% for Germany, 20% for Austria. All prices exclusive of carriage charges. Prices and other details are subject to change without notice. All errors and omissions excepted..
Recommended publications
  • Basal Body Structure and Composition in the Apicomplexans Toxoplasma and Plasmodium Maria E
    Francia et al. Cilia (2016) 5:3 DOI 10.1186/s13630-016-0025-5 Cilia REVIEW Open Access Basal body structure and composition in the apicomplexans Toxoplasma and Plasmodium Maria E. Francia1* , Jean‑Francois Dubremetz2 and Naomi S. Morrissette3 Abstract The phylum Apicomplexa encompasses numerous important human and animal disease-causing parasites, includ‑ ing the Plasmodium species, and Toxoplasma gondii, causative agents of malaria and toxoplasmosis, respectively. Apicomplexans proliferate by asexual replication and can also undergo sexual recombination. Most life cycle stages of the parasite lack flagella; these structures only appear on male gametes. Although male gametes (microgametes) assemble a typical 9 2 axoneme, the structure of the templating basal body is poorly defined. Moreover, the rela‑ tionship between asexual+ stage centrioles and microgamete basal bodies remains unclear. While asexual stages of Plasmodium lack defined centriole structures, the asexual stages of Toxoplasma and closely related coccidian api‑ complexans contain centrioles that consist of nine singlet microtubules and a central tubule. There are relatively few ultra-structural images of Toxoplasma microgametes, which only develop in cat intestinal epithelium. Only a subset of these include sections through the basal body: to date, none have unambiguously captured organization of the basal body structure. Moreover, it is unclear whether this basal body is derived from pre-existing asexual stage centrioles or is synthesized de novo. Basal bodies in Plasmodium microgametes are thought to be synthesized de novo, and their assembly remains ill-defined. Apicomplexan genomes harbor genes encoding δ- and ε-tubulin homologs, potentially enabling these parasites to assemble a typical triplet basal body structure.
    [Show full text]
  • Eukaryotic Microorganisms Algae and Protozoans 2
    Eukaryotic Microorganisms Algae and Protozoans 2 Eukaryotic Microorganisms . prominent members of ecosystems . useful as model systems and industry . some are major human pathogens . two groups . protists . fungi 3 Kingdom Protista . Algae - eukaryotic organisms, usually unicellular and colonial, that photosynthesize with chlorophyll a . Protozoa - unicellular eukaryotes that lack tissues and share similarities in cell structure, nutrition, life cycle, and biochemistry 4 Algae .Photosynthetic organisms .Microscopic forms are unicellular, colonial, filamentous .Macroscopic forms are colonial and multicellular .Contain chloroplasts with chlorophyll and other pigments .Cell wall .May or may not have flagella 5 6 Algae .Most are free-living in fresh and marine water – plankton .Provide basis of food web in most aquatic habitats .Produce large proportion of atmospheric O2 .Dinoflagellates can cause red tides and give off toxins that cause food poisoning with neurological symptoms .Classified according to types of pigments and cell wall .Used for cosmetics, food, and medical products 7 Protozoa Protozoa 9 .Diverse group of 65,000 species .Vary in shape, lack a cell wall .Most are unicellular; colonies are rare .Most are harmless, free-living in a moist habitat .Some are animal parasites and can be spread by insect vectors .All are heterotrophic – lack chloroplasts .Cytoplasm divided into ectoplasm and endoplasm .Feed by engulfing other microbes and organic matter Protozoa 10 .Most have locomotor structures – flagella, cilia, or pseudopods .Exist as trophozoite – motile feeding stage .Many can enter into a dormant resting stage when conditions are unfavorable for growth and feeding – cyst .All reproduce asexually, mitosis or multiple fission; many also reproduce sexually – conjugation Figure 5.27 11 Protozoan Identification 12 .
    [Show full text]
  • The Intestinal Protozoa
    The Intestinal Protozoa A. Introduction 1. The Phylum Protozoa is classified into four major subdivisions according to the methods of locomotion and reproduction. a. The amoebae (Superclass Sarcodina, Class Rhizopodea move by means of pseudopodia and reproduce exclusively by asexual binary division. b. The flagellates (Superclass Mastigophora, Class Zoomasitgophorea) typically move by long, whiplike flagella and reproduce by binary fission. c. The ciliates (Subphylum Ciliophora, Class Ciliata) are propelled by rows of cilia that beat with a synchronized wavelike motion. d. The sporozoans (Subphylum Sporozoa) lack specialized organelles of motility but have a unique type of life cycle, alternating between sexual and asexual reproductive cycles (alternation of generations). e. Number of species - there are about 45,000 protozoan species; around 8000 are parasitic, and around 25 species are important to humans. 2. Diagnosis - must learn to differentiate between the harmless and the medically important. This is most often based upon the morphology of respective organisms. 3. Transmission - mostly person-to-person, via fecal-oral route; fecally contaminated food or water important (organisms remain viable for around 30 days in cool moist environment with few bacteria; other means of transmission include sexual, insects, animals (zoonoses). B. Structures 1. trophozoite - the motile vegetative stage; multiplies via binary fission; colonizes host. 2. cyst - the inactive, non-motile, infective stage; survives the environment due to the presence of a cyst wall. 3. nuclear structure - important in the identification of organisms and species differentiation. 4. diagnostic features a. size - helpful in identifying organisms; must have calibrated objectives on the microscope in order to measure accurately.
    [Show full text]
  • The Phagotrophic Origin of Eukaryotes and Phylogenetic Classification Of
    International Journal of Systematic and Evolutionary Microbiology (2002), 52, 297–354 DOI: 10.1099/ijs.0.02058-0 The phagotrophic origin of eukaryotes and phylogenetic classification of Protozoa Department of Zoology, T. Cavalier-Smith University of Oxford, South Parks Road, Oxford OX1 3PS, UK Tel: j44 1865 281065. Fax: j44 1865 281310. e-mail: tom.cavalier-smith!zoo.ox.ac.uk Eukaryotes and archaebacteria form the clade neomura and are sisters, as shown decisively by genes fragmented only in archaebacteria and by many sequence trees. This sisterhood refutes all theories that eukaryotes originated by merging an archaebacterium and an α-proteobacterium, which also fail to account for numerous features shared specifically by eukaryotes and actinobacteria. I revise the phagotrophy theory of eukaryote origins by arguing that the essentially autogenous origins of most eukaryotic cell properties (phagotrophy, endomembrane system including peroxisomes, cytoskeleton, nucleus, mitosis and sex) partially overlapped and were synergistic with the symbiogenetic origin of mitochondria from an α-proteobacterium. These radical innovations occurred in a derivative of the neomuran common ancestor, which itself had evolved immediately prior to the divergence of eukaryotes and archaebacteria by drastic alterations to its eubacterial ancestor, an actinobacterial posibacterium able to make sterols, by replacing murein peptidoglycan by N-linked glycoproteins and a multitude of other shared neomuran novelties. The conversion of the rigid neomuran wall into a flexible surface coat and the associated origin of phagotrophy were instrumental in the evolution of the endomembrane system, cytoskeleton, nuclear organization and division and sexual life-cycles. Cilia evolved not by symbiogenesis but by autogenous specialization of the cytoskeleton.
    [Show full text]
  • Protist Phylogeny and the High-Level Classification of Protozoa
    Europ. J. Protistol. 39, 338–348 (2003) © Urban & Fischer Verlag http://www.urbanfischer.de/journals/ejp Protist phylogeny and the high-level classification of Protozoa Thomas Cavalier-Smith Department of Zoology, University of Oxford, South Parks Road, Oxford, OX1 3PS, UK; E-mail: [email protected] Received 1 September 2003; 29 September 2003. Accepted: 29 September 2003 Protist large-scale phylogeny is briefly reviewed and a revised higher classification of the kingdom Pro- tozoa into 11 phyla presented. Complementary gene fusions reveal a fundamental bifurcation among eu- karyotes between two major clades: the ancestrally uniciliate (often unicentriolar) unikonts and the an- cestrally biciliate bikonts, which undergo ciliary transformation by converting a younger anterior cilium into a dissimilar older posterior cilium. Unikonts comprise the ancestrally unikont protozoan phylum Amoebozoa and the opisthokonts (kingdom Animalia, phylum Choanozoa, their sisters or ancestors; and kingdom Fungi). They share a derived triple-gene fusion, absent from bikonts. Bikonts contrastingly share a derived gene fusion between dihydrofolate reductase and thymidylate synthase and include plants and all other protists, comprising the protozoan infrakingdoms Rhizaria [phyla Cercozoa and Re- taria (Radiozoa, Foraminifera)] and Excavata (phyla Loukozoa, Metamonada, Euglenozoa, Percolozoa), plus the kingdom Plantae [Viridaeplantae, Rhodophyta (sisters); Glaucophyta], the chromalveolate clade, and the protozoan phylum Apusozoa (Thecomonadea, Diphylleida). Chromalveolates comprise kingdom Chromista (Cryptista, Heterokonta, Haptophyta) and the protozoan infrakingdom Alveolata [phyla Cilio- phora and Miozoa (= Protalveolata, Dinozoa, Apicomplexa)], which diverged from a common ancestor that enslaved a red alga and evolved novel plastid protein-targeting machinery via the host rough ER and the enslaved algal plasma membrane (periplastid membrane).
    [Show full text]
  • CH28 PROTISTS.Pptx
    9/29/14 Biosc 41 Announcements 9/29 Review: History of Life v Quick review followed by lecture quiz (history & v How long ago is Earth thought to have formed? phylogeny) v What is thought to have been the first genetic material? v Lecture: Protists v Are we tetrapods? v Lab: Protozoa (animal-like protists) v Most atmospheric oxygen comes from photosynthesis v Lab exam 1 is Wed! (does not cover today’s lab) § Since many of the first organisms were photosynthetic (i.e. cyanobacteria), a LOT of excess oxygen accumulated (O2 revolution) § Some organisms adapted to use it (aerobic respiration) Review: History of Life Review: Phylogeny v Which organelles are thought to have originated as v Homology is similarity due to shared ancestry endosymbionts? v Analogy is similarity due to convergent evolution v During what event did fossils resembling modern taxa suddenly appear en masse? v A valid clade is monophyletic, meaning it consists of the ancestor taxon and all its descendants v How many mass extinctions seem to have occurred during v A paraphyletic grouping consists of an ancestral species and Earth’s history? Describe one? some, but not all, of the descendants v When is adaptive radiation likely to occur? v A polyphyletic grouping includes distantly related species but does not include their most recent common ancestor v Maximum parsimony assumes the tree requiring the fewest evolutionary events is most likely Quiz 3 (History and Phylogeny) BIOSC 041 1. How long ago is Earth thought to have formed? 2. Why might many organisms have evolved to use aerobic respiration? PROTISTS! Reference: Chapter 28 3.
    [Show full text]
  • Pusillus Poseidon's Guide to Protozoa
    Pusillus Poseidon’s guide to PROTOZOA GENERAL NOTES ABOUT PROTOZOANS Protozoa are also called protists. The word “protist” is the more general term and includes all types of single-celled eukaryotes, whereas “protozoa” is more often used to describe the protists that are animal-like (as opposed to plant-like or fungi-like). Protists are measured using units called microns. There are 1000 microns in one millimeter. A millimeter is the smallest unit on a metric ruler and can be estimated with your fingers: The traditional way of classifying protists is by the way they look (morphology), by the way they move (mo- tility), and how and what they eat. This gives us terms such as ciliates, flagellates, ameboids, and all those colors of algae. Recently, the classification system has been overhauled and has become immensely complicated. (Infor- mation about DNA is now the primary consideration for classification, rather than how a creature looks or acts.) If you research these creatures on Wikipedia, you will see this new system being used. Bear in mind, however, that the categories are constantly shifting as we learn more and more about protist DNA. Here is a visual overview that might help you understand the wide range of similarities and differences. Some organisms fit into more than one category and some don’t fit well into any category. Always remember that classification is an artificial construct made by humans. The organisms don’t know anything about it and they don’t care what we think! CILIATES Eats anything smaller than Blepharisma looks slightly pink because it Blepharisma itself, even smaller Bleph- makes a red pigment that senses light (simi- arismas.
    [Show full text]
  • "Plasmodium". In: Encyclopedia of Life Sciences (ELS)
    Plasmodium Advanced article Lawrence H Bannister, King’s College London, London, UK Article Contents . Introduction and Description of Plasmodium Irwin W Sherman, University of California, Riverside, California, USA . Plasmodium Hosts Based in part on the previous version of this Encyclopedia of Life Sciences . Life Cycle (ELS) article, Plasmodium by Irwin W Sherman. Asexual Blood Stages . Intracellular Asexual Blood Parasite Stages . Sexual Stages . Mosquito Asexual Stages . Pre-erythrocytic Stages . Metabolism . The Plasmodium Genome . Motility . Recent History of Plasmodium Research . Evolution of Plasmodium . Conclusion Online posting date: 15th December 2009 Plasmodium is a genus of parasitic protozoa which infect Introduction and Description of erythrocytes of vertebrates and cause malaria. Their life cycle alternates between mosquito and vertebrate hosts. Plasmodium Parasites enter the bloodstream after a mosquito bite, Parasites of the genus Plasmodium are protozoans which and multiply sequentially within liver cells and erythro- invade and multiply within erythrocytes of vertebrates, and cytes before becoming male or female sexual forms. When are transmitted by mosquitoes. The motile invasive stages ingested by a mosquito, these fuse, then the parasite (merozoite, ookinete and sporozoite) are elongate, uni- multiplies again to form more invasive stages which are nucleate cells able to enter cells or pass through tissues, transmitted back in the insect’s saliva to a vertebrate. All using specialized secretory and locomotory organelles.
    [Show full text]
  • Lab Exercise: Diversity of Eukaryotic Microbes OBJECTIVES
    Lab Exercise: Diversity of Eukaryotic Microbes OBJECTIVES 1. To observe representatives of major types of microbes. 2. To cultivate select representatives of major types of microbes. 3. Understand key characteristics of the different eukaryotic microbes and groups found within these Kingdoms. INTRODUCTION Eukaryotic organisms have a nucleus in a membrane. They are typically more complex than prokaryotic organisms. They make up the Domain Eukarya and include the major kingdoms of Protista, Fungi, Plantae and Animalia. Protista is a diverse group that includes many different types of organisms, divided into the animal-like protists, or protozoa, and the plant-like protists, or algae. Protozoa are examples of Protistans that we will survey in this lab. Fungi are a kingdom of organisms that may be unicellular or multicellar, yeasts or molds. All fungi absorb their nutrients from their environment. Animals are multicelluar organisms that ingest their nutrients. This lab will be presented in three parts, one focusing on Protozoa, one on Fungi and one on Helminths (parasitic worms of the animal kingdom). Protozoa These are unicelluar eukaryotes. They do not have cell walls, but do have a membrane called a pellicle surrounding the cell. They have a nucleus and membrane bound organelles. They typically form cysts, a hardy dormant life-form that allows survival of harsh environments. Protozoa are classified into four phyla or groups based on their means of locomotion: • Flagellates (or phylum Mastigophora) • Amoebae (or phylum Sarcodina) • Sporozoans (or phylum Apicomplexa) and • Ciliates (or phylum Ciliophora). Flagellates have flagella for locomotion. Amoebae move by use of a pseudopod. Ciliates move with the aid of multiple cilia.
    [Show full text]
  • ZOOLOGY Biology of Parasitism Plasmodium: Morphology and Life Cycle Development Team
    Paper No.: 08 Biology of Parasitism Module : 10 Plasmodium: Morphology and Life Cycle Development Team Principal Investigator: Prof. Neeta Sehgal Head, Department of Zoology, University of Delhi Paper Coordinator: Dr. Pawan Malhotra ICGEB, New Delhi Content Writer: Dr. Gauri Mishra Swami Shraddhanand College, University of Delhi Content Reviewer: Prof. Virender Kumar Bhasin Department of Zoology, University of Delhi 1 Biology of Parasitism ZOOLOGY Plasmodium: Morphology and Life Cycle Description of Module Subject Name ZOOLOGY Paper Name Biology of Parasitism Module Name/Title Plasmodium: Morphology and Life Cycle Module Id 10; Morphology and Life Cycle Keywords Plasmodium, Infection, Species, Parasite, Erythrocytic Contents 1. Learning Outcomes 2. Introduction 3. Spectrum of Plasmodium Infection 3.1. Species of Malaria Parasite Afflict Human Beings 4. Morphology of Plasmodium 5. Life Cycle of the Malaria Parasite 5.1. Exo-erythrocytic Stages of Human Malaria Parasites 5.2. Erythrocytic Stages of Human Malaria Parasites 5.3. Sexual Cycle in the Mosquito 6. Summary 2 Biology of Parasitism ZOOLOGY Plasmodium: Morphology and Life Cycle 1. Learning Outcomes The module has been designed to make you understand: General aspect of Plasmodium Spectrum of Plasmodium infection Species of Malaria parasite afflict human beings Morphology of different stages Life Cycle of Plasmodium 2. Introduction Plasmodium, an intracellular endoparasitic protozoan which passes on to human beings by female Anopheles mosquito, is responsible for causing Malaria. It is commonly known as the malaria parasite. Malaria is one of the most dreaded diseases of tropical countries and remains as an epidemic in more than 100 countries (Figure 1). Deadly fevers-probably malaria-have been recorded since the beginning of the written word and references can also be found in Vedic writings in India.
    [Show full text]
  • Inferring Ancestry
    Digital Comprehensive Summaries of Uppsala Dissertations from the Faculty of Science and Technology 1176 Inferring Ancestry Mitochondrial Origins and Other Deep Branches in the Eukaryote Tree of Life DING HE ACTA UNIVERSITATIS UPSALIENSIS ISSN 1651-6214 ISBN 978-91-554-9031-7 UPPSALA urn:nbn:se:uu:diva-231670 2014 Dissertation presented at Uppsala University to be publicly examined in Fries salen, Evolutionsbiologiskt centrum, Norbyvägen 18, 752 36, Uppsala, Friday, 24 October 2014 at 10:30 for the degree of Doctor of Philosophy. The examination will be conducted in English. Faculty examiner: Professor Andrew Roger (Dalhousie University). Abstract He, D. 2014. Inferring Ancestry. Mitochondrial Origins and Other Deep Branches in the Eukaryote Tree of Life. Digital Comprehensive Summaries of Uppsala Dissertations from the Faculty of Science and Technology 1176. 48 pp. Uppsala: Acta Universitatis Upsaliensis. ISBN 978-91-554-9031-7. There are ~12 supergroups of complex-celled organisms (eukaryotes), but relationships among them (including the root) remain elusive. For Paper I, I developed a dataset of 37 eukaryotic proteins of bacterial origin (euBac), representing the conservative protein core of the proto- mitochondrion. This gives a relatively short distance between ingroup (eukaryotes) and outgroup (mitochondrial progenitor), which is important for accurate rooting. The resulting phylogeny reconstructs three eukaryote megagroups and places one, Discoba (Excavata), as sister group to the other two (neozoa). This rejects the reigning “Unikont-Bikont” root and highlights the evolutionary importance of Excavata. For Paper II, I developed a 150-gene dataset to test relationships in supergroup SAR (Stramenopila, Alveolata, Rhizaria). Analyses of all 150-genes give different trees with different methods, but also reveal artifactual signal due to extremely long rhizarian branches and illegitimate sequences due to horizontal gene transfer (HGT) or contamination.
    [Show full text]
  • Chapter 16 Outline
    CHAPTER 16 Microbial Life: Prokaryotes and Protists Chapter Objectives Prokaryotes 16.1 Describe the diversity, abundance, and importance of prokaryotic life. 16.2 Compare the different shapes, cell walls, and projections of prokaryotes. 16.3 Explain how bacteria can evolve quickly and how bacteria can survive stressful environments. 16.4 Describe the types of nutritional diversity found in prokaryotes. 16.5 Explain why biofilms are unique and potentially dangerous to human health. 16.6 Explain how prokaryotes are employed to address the needs of human society. 16.7 Compare the three domains of life based on differences in cellular and biochemical traits. 16.8 Describe the diverse types of Archaea living in extreme and more moderate environments. 16.9 Distinguish between the five subgroups of the domain Bacteria, noting the particular structure, special features, and habitats of each group. 16.10 Describe some of the diseases associated with bacteria. Distinguish between exotoxins and en- dotoxins, noting examples of each. 16.11 Describe the four parts of Koch’s postulates. Explain how Marshall was able to demonstrate that the bacterium Helicobacter pylori can cause gastritis. Protists 16.12 Describe the basic types of protists. Explain why biologists currently think that they represent many clades. 16.13 Explain how primary endosymbiosis and secondary endosymbiosis led to further cellular diversity. 16.14 Describe and compare the groups that together form the supergroup SAR. 16.15 Explain how cultured algae may be used as renewable fuels and the current challenges that re- main. 16.16–16.18 Describe and distinguish between the Excavata, Unikonta, and Archaeplastida groups.
    [Show full text]