Activated Sludge Microbiology
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Basal Body Structure and Composition in the Apicomplexans Toxoplasma and Plasmodium Maria E
Francia et al. Cilia (2016) 5:3 DOI 10.1186/s13630-016-0025-5 Cilia REVIEW Open Access Basal body structure and composition in the apicomplexans Toxoplasma and Plasmodium Maria E. Francia1* , Jean‑Francois Dubremetz2 and Naomi S. Morrissette3 Abstract The phylum Apicomplexa encompasses numerous important human and animal disease-causing parasites, includ‑ ing the Plasmodium species, and Toxoplasma gondii, causative agents of malaria and toxoplasmosis, respectively. Apicomplexans proliferate by asexual replication and can also undergo sexual recombination. Most life cycle stages of the parasite lack flagella; these structures only appear on male gametes. Although male gametes (microgametes) assemble a typical 9 2 axoneme, the structure of the templating basal body is poorly defined. Moreover, the rela‑ tionship between asexual+ stage centrioles and microgamete basal bodies remains unclear. While asexual stages of Plasmodium lack defined centriole structures, the asexual stages of Toxoplasma and closely related coccidian api‑ complexans contain centrioles that consist of nine singlet microtubules and a central tubule. There are relatively few ultra-structural images of Toxoplasma microgametes, which only develop in cat intestinal epithelium. Only a subset of these include sections through the basal body: to date, none have unambiguously captured organization of the basal body structure. Moreover, it is unclear whether this basal body is derived from pre-existing asexual stage centrioles or is synthesized de novo. Basal bodies in Plasmodium microgametes are thought to be synthesized de novo, and their assembly remains ill-defined. Apicomplexan genomes harbor genes encoding δ- and ε-tubulin homologs, potentially enabling these parasites to assemble a typical triplet basal body structure. -
Review Pili in Gram-Negative and Gram-Positive Bacteria – Structure
Cell. Mol. Life Sci. 66 (2009) 613 – 635 1420-682X/09/040613-23 Cellular and Molecular Life Sciences DOI 10.1007/s00018-008-8477-4 Birkhuser Verlag, Basel, 2008 Review Pili in Gram-negative and Gram-positive bacteria – structure, assembly and their role in disease T. Profta,c,* and E. N. Bakerb,c a School of Medical Sciences, Department of Molecular Medicine & Pathology, University of Auckland, Private Bag 92019, Auckland 1142 (New Zealand), Fax: +64-9-373-7492, e-mail: [email protected] b School of Biological Sciences, University of Auckland, Auckland (New Zealand) c Maurice Wilkins Centre for Molecular Biodiscovery, University of Auckland (New Zealand) Received 08 August 2008; received after revision 24 September 2008; accepted 01 October 2008 Online First 27 October 2008 Abstract. Many bacterial species possess long fila- special form of bacterial cell movement, known as mentous structures known as pili or fimbriae extend- twitching motility. In contrast, the more recently ing from their surfaces. Despite the diversity in pilus discovered pili in Gram-positive bacteria are formed structure and biogenesis, pili in Gram-negative bac- by covalent polymerization of pilin subunits in a teria are typically formed by non-covalent homopo- process that requires a dedicated sortase enzyme. lymerization of major pilus subunit proteins (pilins), Minor pilins are added to the fiber and play a major which generates the pilus shaft. Additional pilins may role in host cell colonization. be added to the fiber and often function as host cell This review gives an overview of the structure, adhesins. Some pili are also involved in biofilm assembly and function of the best-characterized pili formation, phage transduction, DNA uptake and a of both Gram-negative and Gram-positive bacteria. -
A Combined Vermifiltration-Hydroponic System
applied sciences Article A Combined Vermifiltration-Hydroponic System for Swine Wastewater Treatment Kirill Ispolnov 1,*, Luis M. I. Aires 1,Nídia D. Lourenço 2 and Judite S. Vieira 1 1 Laboratory of Separation and Reaction Engineering-Laboratory of Catalysis and Materials (LSRE-LCM), School of Technology and Management (ESTG), Polytechnic Institute of Leiria, 2411-901 Leiria, Portugal; [email protected] (L.M.I.A.); [email protected] (J.S.V.) 2 Applied Molecular Biosciences Unit (UCIBIO)-REQUIMTE, Department of Chemistry, NOVA School of Science and Technology (FCT), NOVA University of Lisbon, 2829-516 Caparica, Portugal; [email protected] * Correspondence: [email protected] Abstract: Intensive swine farming causes strong local environmental impacts by generating ef- fluents rich in solids, organic matter, nitrogen, phosphorus, and pathogenic bacteria. Insufficient treatment of hog farm effluents has been reported for common technologies, and vermifiltration is considered a promising treatment alternative that, however, requires additional processes to remove nitrate and phosphorus. This work aimed to study the use of vermifiltration with a downstream hydroponic culture to treat hog farm effluents. A treatment system comprising a vermifilter and a downstream deep-water culture hydroponic unit was built. The treated effluent was reused to dilute raw wastewater. Electrical conductivity, pH, and changes in BOD5, ammonia, nitrite, nitrate, phosphorus, and coliform bacteria were assessed. Plants were monitored throughout the experiment. Electrical conductivity increased due to vermifiltration; pH stayed within a neutral to mild alkaline range. Vermifiltration removed 83% of BOD5, 99% of ammonia and nitrite, and increased nitrate by Citation: Ispolnov, K.; Aires, L.M.I.; 11%. -
General Microbiology (11:680:390) Syllabus
COURSE SYLLABUS General Microbiology - 11:680:390 COURSE OVERVIEW General Microbiology 11:680:390 Fall, Spring, Summer Meeting times TBD Meeting Location Lecture: Sychronous Lecture Hall Cook/Douglas and Wright Labs Busch Meeting Location Lab: Food Science 209 CONTACT INFORMATION: Course Coordinator: Dr. Ines Rauschenbach Office Location: Lipman Hall, Room 215 Phone: 848-932-5635 Email: [email protected] Office Hours: By Appointment COURSE WEBSITE, RESOURCES AND MATERIALS: • Canvas • Text: Madigan MT, Bender KS, Buckley DH, Sattley WM, Stahl DA. 2020. Brock Biology of Microorganisms. 16th edition. Pearson, New York, NY. • Lab Manual o The lab manual (departmental publication) will be available for free through RUCore. • Electronic Notebook o We will be sending you a link to LabArchives. You must sign up before the start of your first lab. COURSE DESCRIPTION: This course offers a comprehensive study of the field of microbiology to science majors. The course will give detailed insights into five major themes: Structure and function of microbes (cellular structures, metabolism, and growth);,microbial genetics, microbial ecology, microbial diversity (prokaryotes, eukaryotes, viruses) and clinical microbiology (immunity, pathogenicity, epidemiology, control of microbes, and diseases). The course is taught in the synchronous lecture halls on Cook/Douglass and Busch campuses. Students are expected to participate in active learning activities and participate in class discussion to deepen their understanding of the microbial world and apply their knowledge to various concepts. LEARNING GOALS: Learning Goals for General Microbiology Lecture: After completion of the lecture component of the course, successful students will: 1. Demonstrate an understanding of the structural similarities and differences among microbes and the unique structure/function relationships of prokaryotic cells. -
Treatment of Sewage by Vermifiltration: a Review
Treatment of Sewage by Vermifiltration: A Review 1 2 Jatin Patel , Prof. Y. M. Gajera 1 M.E. Environmental Management, L.D. College of Engineering Ahmedabad -15 2 Assistant professor, Environmental Engineering, L.D. College of Engineering Ahmedabad -15 Abstract: A centralized treatment facility often faces problems of high cost of collection, treatment and disposal of wastewater and hence the growing needs for small scale decentralized eco-friendly alternative treatment options are necessary. Vermifiltration is such method where wastewater is treated using earthworms. Earthworm's body works as a biofilter and have been found to remove BOD, COD, TDS, and TSS by general mechanism of ingestion, biodegradation, and absorption through body walls. There is no sludge formation in vermifiltration process which requires additional cost on landfill disposal and it is also odor-free process. Treated water also can used for farm irrigation and in parks and gardens. The present study will evaluate the performance of vermifiltration for parameters like BOD, COD, TDS, TSS, phosphorus and nitrogen for sewage. Keywords: Vermifiltration, Earthworms, Wastewater, Ingestion, Absorption Introduction Due to the increasing population and scarcity of treatment area, high cost of wastewater collection and its treatment is not allowing the conventional STP everywhere. Hence, cost effective decentralized and eco-friendly treatments are required. Many developing countries can‟t afford the construction of STPs, and thus, there is a growing need for developing some ecologically safe and economically viable onsite small-scale wastewater treatment technologies. [24] The discharge of untreated wastewater in surface and sub-surface water courses is the most important source of contamination of water resources. -
Recommended Standards for Wastewater Facilities
RECOMMENDED STANDARDS for WASTEWATER FACILITIES POLICIES FOR THE DESIGN, REVIEW, AND APPROVAL OF PLANS AND SPECIFICATIONS FOR WASTEWATER COLLECTION AND TREATMENT FACILITIES 2014 EDITION A REPORT OF THE WASTEWATER COMMITTEE OF THE GREAT LAKES - UPPER MISSISSIPPI RIVER BOARD OF STATE AND PROVINCIAL PUBLIC HEALTH AND ENVIRONMENTAL MANAGERS MEMBER STATES AND PROVINCE ILLINOIS NEW YORK INDIANA OHIO IOWA ONTARIO MICHIGAN PENNSYLVANIA MINNESOTA WISCONSIN MISSOURI PUBLISHED BY: Health Research, Inc., Health Education Services Division P.O. Box 7126 Albany, N.Y. 12224 Phone: (518) 439-7286 Visit Our Web Site http://www.healthresearch.org/store/ten-state-standards Copyright © 2014 by the Great Lakes - Upper Mississippi River Board of State and Provincial Public Health and Environmental Managers This document, or portions thereof, may be reproduced without permission if credit is given to the Board and to this publication as a source. ii TABLE OF CONTENTS CHAPTER PAGE FOREWORD ..................................................................................................................................... v 10 ENGINEERING REPORTS AND FACILITY PLANS 10. General ............................................................................................................................. 10-1 11. Engineering Report Or Facility Plan ................................................................................ 10-1 12. Pre-Design Meeting ....................................................................................................... 10-12 -
Nematode Management for Bedding Plants1 William T
ENY-052 Nematode Management for Bedding Plants1 William T. Crow2 Florida is the “land of flowers.” Surely, one of the things that Florida is known for is the beauty of its vegetation. Due to the tropical and subtropical environment, color can abound in Florida landscapes year-round. Unfortunately, plants are not the only organisms that enjoy the mild climate. Due to warm temperatures, sandy soil, and humidity, Florida has more than its fair share of pests and pathogens that attack bedding plants. Plant-parasitic nematodes (Figure 1) can be among the most damaging and hard-to-control of these organisms. What are nematodes? Nematodes are unsegmented roundworms, different from earthworms and other familiar worms that are segmented (annelids) or in some cases flattened and slimy (flatworms). Many kinds of nematodes may be found in the soil of any landscape. Most are beneficial, feeding on bacteria, fungi, or other microscopic organisms, and some may be used as biological control organisms to help manage important insect pests. Plant-parasitic nematodes are nematodes that Figure 1. Diagram of a generic plant-parasitic nematode. feed on live plants (Figure 1). Credits: R. P. Esser, Florida Department of Agriculture and Consumer Services, Division of Plant Industry; used with permission. Plant-parasitic nematodes are very small and most can only be seen using a microscope (Figure 2). All plant-parasitic nematodes have a stylet or mouth-spear that is similar in structure and function to a hypodermic needle (Figure 3). 1. This document is ENY-052, one of a series of the Department of Entomology and Nematology, UF/IFAS Extension. -
Eukaryotic Microorganisms Algae and Protozoans 2
Eukaryotic Microorganisms Algae and Protozoans 2 Eukaryotic Microorganisms . prominent members of ecosystems . useful as model systems and industry . some are major human pathogens . two groups . protists . fungi 3 Kingdom Protista . Algae - eukaryotic organisms, usually unicellular and colonial, that photosynthesize with chlorophyll a . Protozoa - unicellular eukaryotes that lack tissues and share similarities in cell structure, nutrition, life cycle, and biochemistry 4 Algae .Photosynthetic organisms .Microscopic forms are unicellular, colonial, filamentous .Macroscopic forms are colonial and multicellular .Contain chloroplasts with chlorophyll and other pigments .Cell wall .May or may not have flagella 5 6 Algae .Most are free-living in fresh and marine water – plankton .Provide basis of food web in most aquatic habitats .Produce large proportion of atmospheric O2 .Dinoflagellates can cause red tides and give off toxins that cause food poisoning with neurological symptoms .Classified according to types of pigments and cell wall .Used for cosmetics, food, and medical products 7 Protozoa Protozoa 9 .Diverse group of 65,000 species .Vary in shape, lack a cell wall .Most are unicellular; colonies are rare .Most are harmless, free-living in a moist habitat .Some are animal parasites and can be spread by insect vectors .All are heterotrophic – lack chloroplasts .Cytoplasm divided into ectoplasm and endoplasm .Feed by engulfing other microbes and organic matter Protozoa 10 .Most have locomotor structures – flagella, cilia, or pseudopods .Exist as trophozoite – motile feeding stage .Many can enter into a dormant resting stage when conditions are unfavorable for growth and feeding – cyst .All reproduce asexually, mitosis or multiple fission; many also reproduce sexually – conjugation Figure 5.27 11 Protozoan Identification 12 . -
Nematicidal Properties of Some Algal Aqueous Extracts Against Root-Knot Nematode, Meloidogyne Incognita in Vitro
6 Egypt. J. Agronematol., Vol. 15, No.1, PP. 67-78 (2016) Nematicidal properties of some algal aqueous extracts against root-knot nematode, Meloidogyne incognita in vitro Ahmed H. Nour El-Deen(*,***)and Ahmed A. Issa(**,***) * Nematology Research Unit, Agricultural Zoology Dept., Faculty of Agriculture, Mansoura University, Egypt. ** Department of Botany, Faculty of Science, Assiut University, Assiut , Egypt. *** Biology Dept., Faculty of Science, Taif University, Saudi Arabia. Corresponding author: [email protected] Abstract The effectiveness of aqueous extracts derived from nine algal species at different concentrations on egg hatching and mortality of Meloidogyne incognita (Kofoid and White) Chitwood juveniles after various exposure times were determined in vitro. Results indicated that Enteromorpha flexuosa at the concentration of 80% was the best treatment for suppressing the egg hatching with value of 2 % after 5 days of exposure, followed by Dilsea carnosa extract (3%) and Codium fragile (4%) at the same concentration and exposure time. Likewise, application of C. fragile, D. carnosa , E. flexuosa and Cystoseira myrica extracts at the concentrations of 80 and 60% were highly toxic to the nematodes, killing more than 90 % of nematode larva after 72 hours of exposure while the others gave quite low mortalities. The characteristic appearances in shape of the nematodes killed by C. fragile, D. carnosa , C. myrica, E. flexuosa and Sargassum muticum was sigmoid (∑-shape) with some curved shape; whereas, the nematodes killed by other algal species mostly followed straight or bent shapes. The present study proved that four species of algae C. fragile, D. carnosa, C. myrica and E. flexuosa could be used for the bio-control of root-knot nematodes. -
Control Root-Knot Nematodes in Your Garden
Agriculture and Natural Resources FSA7529 Control Root-Knot Nematodes in Your Garden Stephen Vann Introduction plants to any extent. A female Assistant Professor root-knot nematode (Figure 2) can lay Urban Plant Pathologist Root-knot nematodes are up to 500 eggs at a time, and root microscopic worms that live in soil damage results from the sheer T.L. Kirkpatrick and feed on the roots of many common number of nematodes feeding on roots Professor - garden crops (Figures 1 and 2). The by the end of the summer. Root-knot Plant Pathologist nematode gets its name because its nematodes tend to be more of a feeding causes galls (swellings or problem in sandy soils. Rick Cartwright “knots”) to form on the roots of infected Professor plants (Figure 3). Root-knot nematodes Symptoms Plant Pathologist are scientifically classified in the genus Meloidogyne. There are several species So how do you tell if root-knot of Meloidogyne, but M. incognita, also nematodes are a problem in your known as the southern root-knot garden? nematode, is the most common one in gardens in Arkansas. First, look for plants that are not performing well. Usually, not all of Some of the crops that may be your plants will be affected to the severely damaged are tomato, pepper, same degree, and some will be “more okra, watermelon, cantaloupe, onion, sick” than others. Symptoms can pumpkin, squash, sweet potato, sweet include stunting, yellowing, wilting corn, carrot, eggplant, bean and pea. during the heat of the day with recov Root-knot nematodes also feed and ery at night, fewer and smaller fruit multiply on many garden weeds, and general decline – usually during although they may not injure these the summer as the plants get bigger. -
The Biological Treatment Method for Landfill Leachate
E3S Web of Conferences 202, 06006 (2020) https://doi.org/10.1051/e3sconf/202020206006 ICENIS 2020 The biological treatment method for landfill leachate Siti Ilhami Firiyal Imtinan1*, P. Purwanto1,2, Bambang Yulianto1,3 1Master Program of Environmental Science, School of Postgraduate Studies, Diponegoro University, Semarang - Indonesia 2Department of Chemical Engineering, Faculty of Engineering, Diponegoro University, Semarang - Indonesia 3Department of Marine Sciences, Faculty of Fisheries and Marine Sciences, Diponegoro University, Semarang - Indonesia Abstract. Currently, waste generation in Indonesia is increasing; the amount of waste generated in a year is around 67.8 million tons. Increasing the amount of waste generation can cause other problems, namely water from the decay of waste called leachate. Leachate can contaminate surface water, groundwater, or soil if it is streamed directly into the environment without treatment. Between physical and chemical, biological methods, and leachate transfer, the most effective treatment is the biological method. The purpose of this article is to understand the biological method for leachate treatment in landfills. It can be concluded that each method has different treatment results because it depends on the leachate characteristics and the treatment method. These biological methods used to treat leachate, even with various leachate characteristics, also can be combined to produce effluent from leachate treatment below the established standards. Keywords. Leachate treatment; biological method; landfill leachate. 1. Introduction Waste generation in Indonesia is increasing, as stated by the Minister of Environment and Forestry, which recognizes the challenges of waste problems in Indonesia are still very large. The amount of waste generated in a year is around 67.8 million tons and will continue to grow in line with population growth [1]. -
Sequencing Batch Reactors: Principles, Design/Operation and Case Studies - S
WATER AND WASTEWATER TREATMENT TECHNOLOGIES - Sequencing Batch Reactors: Principles, Design/Operation and Case Studies - S. Vigneswaran, M. Sundaravadivel, D. S. Chaudhary SEQUENCING BATCH REACTORS: PRINCIPLES, DESIGN/OPERATION AND CASE STUDIES S. Vigneswaran, M. Sundaravadivel, and D. S. Chaudhary Faculty of Engineering and Information Technology, School of Civil and Environmental Engineering and Information Technology, University of Technology Sydney, Australia Keywords: Activated sludge process, return activated sludge, sludge settling, wastewater treatment, Contents 1. Background 2. The SBR technology for wastewater treatment 3. Physical description of the SBR system 3.1 FILL Phase 3.2 REACT Phase 3.3 SETTLE Phase 3.4 DRAW or DECANT Phase 3.5 IDLE Phase 4. Components and configuration of SBR system 5. Control of biological reactions through operating strategies 6. Design of SBR reactor 7. Costs of SBR 8. Case studies 8.1 Quakers Hill STP 8.2 SBR for Nutrient Removal at Bathhurst Sewage Treatment Plant 8.3 St Marys Sewage Treatment plant 8.4 A Small Cheese-Making Dairy in France 8.5 A Full-scale Sequencing Batch Reactor System for Swine Wastewater Treatment, Lo and Liao (2007) 8.6 Sequencing Batch Reactor for Biological Treatment of Grey Water, Lamin et al. (2007) 8.7 SBR Processes in Wastewater Plants, Larrea et al (2007) 9. Conclusion GlossaryUNESCO – EOLSS Bibliography Biographical Sketches SAMPLE CHAPTERS Summary Sequencing batch reactor (SBR) is a fill-and-draw activated sludge treatment system. Although the processes involved in SBR are identical to the conventional activated sludge process, SBR is compact and time oriented system, and all the processes are carried out sequentially in the same tank.