Database, Vol. 2010, Article ID baq013, doi:10.1093/database/baq013 ............................................................................................................................................................................................................................................................................................. Original article The Human Oral Microbiome Database: a web accessible resource for investigating oral microbe taxonomic and genomic information Tsute Chen1,2,*, Wen-Han Yu1, Jacques Izard1,2, Oxana V. Baranova1, Abirami Lakshmanan1 and Floyd E. Dewhirst1,2 1The Forsyth Institute, Boston, MA 02115, USA and 2Department of Oral Medicine, Infection and Immunity, Harvard School of Dental Medicine, Boston, MA 02115, USA *Corresponding author: Tel: +1 617 892 8359; Fax: +1 617 262 5200; Email:
[email protected] Submitted 25 January 2010; Revised 28 May 2010; Accepted 20 June 2010 ............................................................................................................................................................................................................................................................................................. The human oral microbiome is the most studied human microflora, but 53% of the species have not yet been validly named and 35% remain uncultivated. The uncultivated taxa are known primarily from 16S rRNA sequence information. Sequence information tied solely to obscure isolate or clone numbers, and usually lacking accurate phylogenetic placement,