Evolutionary History and Molecular Species Delimitation of A…
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Cryptic Species Delimitation in the Southern Appalachian Antrodiaetus
Cryptic species delimitation in the southern Appalachian Antrodiaetus unicolor (Araneae: Antrodiaetidae) species complex using a 3RAD approach Lacie Newton1, James Starrett1, Brent Hendrixson2, Shahan Derkarabetian3, and Jason Bond4 1University of California Davis 2Millsaps College 3Harvard University 4UC Davis May 5, 2020 Abstract Although species delimitation can be highly contentious, the development of reliable methods to accurately ascertain species boundaries is an imperative step in cataloguing and describing Earth's quickly disappearing biodiversity. Spider species delimi- tation remains largely based on morphological characters; however, many mygalomorph spider populations are morphologically indistinguishable from each other yet have considerable molecular divergence. The focus of our study, Antrodiaetus unicolor species complex which contains two sympatric species, exhibits this pattern of relative morphological stasis with considerable genetic divergence across its distribution. A past study using two molecular markers, COI and 28S, revealed that A. unicolor is paraphyletic with respect to A. microunicolor. To better investigate species boundaries in the complex, we implement the cohesion species concept and employ multiple lines of evidence for testing genetic exchangeability and ecological interchange- ability. Our integrative approach includes extensively sampling homologous loci across the genome using a RADseq approach (3RAD), assessing population structure across their geographic range using multiple genetic clustering analyses that include STRUCTURE, PCA, and a recently developed unsupervised machine learning approach (Variational Autoencoder). We eval- uate ecological similarity by using large-scale ecological data for niche-based distribution modeling. Based on our analyses, we conclude that this complex has at least one additional species as well as confirm species delimitations based on previous less comprehensive approaches. -
Comparative Functional Morphology of Attachment Devices in Arachnida
Comparative functional morphology of attachment devices in Arachnida Vergleichende Funktionsmorphologie der Haftstrukturen bei Spinnentieren (Arthropoda: Arachnida) DISSERTATION zur Erlangung des akademischen Grades doctor rerum naturalium (Dr. rer. nat.) an der Mathematisch-Naturwissenschaftlichen Fakultät der Christian-Albrechts-Universität zu Kiel vorgelegt von Jonas Otto Wolff geboren am 20. September 1986 in Bergen auf Rügen Kiel, den 2. Juni 2015 Erster Gutachter: Prof. Stanislav N. Gorb _ Zweiter Gutachter: Dr. Dirk Brandis _ Tag der mündlichen Prüfung: 17. Juli 2015 _ Zum Druck genehmigt: 17. Juli 2015 _ gez. Prof. Dr. Wolfgang J. Duschl, Dekan Acknowledgements I owe Prof. Stanislav Gorb a great debt of gratitude. He taught me all skills to get a researcher and gave me all freedom to follow my ideas. I am very thankful for the opportunity to work in an active, fruitful and friendly research environment, with an interdisciplinary team and excellent laboratory equipment. I like to express my gratitude to Esther Appel, Joachim Oesert and Dr. Jan Michels for their kind and enthusiastic support on microscopy techniques. I thank Dr. Thomas Kleinteich and Dr. Jana Willkommen for their guidance on the µCt. For the fruitful discussions and numerous information on physical questions I like to thank Dr. Lars Heepe. I thank Dr. Clemens Schaber for his collaboration and great ideas on how to measure the adhesive forces of the tiny glue droplets of harvestmen. I thank Angela Veenendaal and Bettina Sattler for their kind help on administration issues. Especially I thank my students Ingo Grawe, Fabienne Frost, Marina Wirth and André Karstedt for their commitment and input of ideas. -
The Coume Ouarnède System, a Hotspot of Subterranean Biodiversity in Pyrenees (France)
diversity Article The Coume Ouarnède System, a Hotspot of Subterranean Biodiversity in Pyrenees (France) Arnaud Faille 1,* and Louis Deharveng 2 1 Department of Entomology, State Museum of Natural History, 70191 Stuttgart, Germany 2 Institut de Systématique, Évolution, Biodiversité (ISYEB), UMR7205, CNRS, Muséum National d’Histoire Naturelle, Sorbonne Université, EPHE, 75005 Paris, France; [email protected] * Correspondence: [email protected] Abstract: Located in Northern Pyrenees, in the Arbas massif, France, the system of the Coume Ouarnède, also known as Réseau Félix Trombe—Henne Morte, is the longest and the most complex cave system of France. The system, developed in massive Mesozoic limestone, has two distinct resur- gences. Despite relatively limited sampling, its subterranean fauna is rich, composed of a number of local endemics, terrestrial as well as aquatic, including two remarkable relictual species, Arbasus cae- cus (Simon, 1911) and Tritomurus falcifer Cassagnau, 1958. With 38 stygobiotic and troglobiotic species recorded so far, the Coume Ouarnède system is the second richest subterranean hotspot in France and the first one in Pyrenees. This species richness is, however, expected to increase because several taxonomic groups, like Ostracoda, as well as important subterranean habitats, like MSS (“Milieu Souterrain Superficiel”), have not been considered so far in inventories. Similar levels of subterranean biodiversity are expected to occur in less-sampled karsts of central and western Pyrenees. Keywords: troglobionts; stygobionts; cave fauna Citation: Faille, A.; Deharveng, L. The Coume Ouarnède System, a Hotspot of Subterranean Biodiversity in Pyrenees (France). Diversity 2021, 1. Introduction 13 , 419. https://doi.org/10.3390/ Stretching at the border between France and Spain, the Pyrenees are known as one d13090419 of the subterranean hotspots of the world [1]. -
Sustentable De Especies De Tarántula
Plan de acción de América del Norte para un comercio sustentable de especies de tarántula Comisión para la Cooperación Ambiental Citar como: CCA (2017), Plan de acción de América del Norte para un comercio sustentable de especies de tarántula, Comisión para la Cooperación Ambiental, Montreal, 48 pp. La presente publicación fue elaborada por Rick C. West y Ernest W. T. Cooper, de E. Cooper Environmental Consulting, para el Secretariado de la Comisión para la Cooperación Ambiental. La información que contiene es responsabilidad de los autores y no necesariamente refleja los puntos de vista de los gobiernos de Canadá, Estados Unidos o México. Se permite la reproducción de este material sin previa autorización, siempre y cuando se haga con absoluta precisión, su uso no tenga fines comerciales y se cite debidamente la fuente, con el correspondiente crédito a la Comisión para la Cooperación Ambiental. La CCA apreciará que se le envíe una copia de toda publicación o material que utilice este trabajo como fuente. A menos que se indique lo contrario, el presente documento está protegido mediante licencia de tipo “Reconocimiento – No comercial – Sin obra derivada”, de Creative Commons. Detalles de la publicación Categoría del documento: publicación de proyecto Fecha de publicación: mayo de 2017 Idioma original: inglés Procedimientos de revisión y aseguramiento de la calidad: Revisión final de las Partes: abril de 2017 QA311 Proyecto: Fortalecimiento de la conservación y el aprovechamiento sustentable de especies listadas en el Apéndice II de la -
De Hooiwagens 1St Revision14
Table of Contents INTRODUCTION ............................................................................................................................................................ 2 CHARACTERISTICS OF HARVESTMEN ............................................................................................................................ 2 GROUPS SIMILAR TO HARVESTMEN ............................................................................................................................. 3 PREVIOUS PUBLICATIONS ............................................................................................................................................. 3 BIOLOGY ......................................................................................................................................................................... 3 LIFE CYCLE ..................................................................................................................................................................... 3 MATING AND EGG-LAYING ........................................................................................................................................... 4 FOOD ............................................................................................................................................................................. 4 DEFENCE ........................................................................................................................................................................ 4 PHORESY, -
Arachnida, Solifugae) with Special Focus on Functional Analyses and Phylogenetic Interpretations
HISTOLOGY AND ULTRASTRUCTURE OF SOLIFUGES Comparative studies of organ systems of solifuges (Arachnida, Solifugae) with special focus on functional analyses and phylogenetic interpretations HISTOLOGIE UND ULTRASTRUKTUR DER SOLIFUGEN Vergleichende Studien an Organsystemen der Solifugen (Arachnida, Solifugae) mit Schwerpunkt auf funktionellen Analysen und phylogenetischen Interpretationen I N A U G U R A L D I S S E R T A T I O N zur Erlangung des akademischen Grades doctor rerum naturalium (Dr. rer. nat.) an der Mathematisch-Naturwissenschaftlichen Fakultät der Ernst-Moritz-Arndt-Universität Greifswald vorgelegt von Anja Elisabeth Klann geboren am 28.November 1976 in Bremen Greifswald, den 04.06.2009 Dekan ........................................................................................................Prof. Dr. Klaus Fesser Prof. Dr. Dr. h.c. Gerd Alberti Erster Gutachter .......................................................................................... Zweiter Gutachter ........................................................................................Prof. Dr. Romano Dallai Tag der Promotion ........................................................................................15.09.2009 Content Summary ..........................................................................................1 Zusammenfassung ..........................................................................5 Acknowledgments ..........................................................................9 1. Introduction ............................................................................ -
The Role of Microhabitats in Structuring Cave Invertebrate Communities in Guatemala Gabrielle S.M
International Journal of Speleology 49 (2) 161-169 Tampa, FL (USA) May 2020 Available online at scholarcommons.usf.edu/ijs International Journal of Speleology Off icial Journal of Union Internationale de Spéléologie The role of microhabitats in structuring cave invertebrate communities in Guatemala Gabrielle S.M. Pacheco 1*, Marconi Souza Silva 1, Enio Cano 2, and Rodrigo L. Ferreira 1 1Universidade Federal de Lavras, Departamento de Ecologia e Conservação, Setor de Biodiversidade Subterrânea, Centro de Estudos em Biologia Subterrânea, Caixa Postal 3037, CEP 37200-900, Lavras, Minas Gerais, Brasil 2Escuela de Biología, Facultad de Ciencias Químicas y Farmacia, Universidad de San Carlos de Guatemala, Ciudad Universitaria, Zona 12, 01012, Guatemala City, Guatemala Abstract: Several studies have tried to elucidate the main environmental features driving invertebrate community structure in cave environments. They found that many factors influence the community structure, but rarely focused on how substrate types and heterogeneity might shape these communities. Therefore, the objective of this study was to assess which substrate features and whether or not substrate heterogeneity determines the invertebrate community structure (species richness and composition) in a set of limestone caves in Guatemala. We hypothesized that the troglobitic fauna responds differently to habitat structure regarding species richness and composition than non-troglobitic fauna because they are more specialized to live in subterranean habitats. Using 30 m2 transects, the invertebrate fauna was collected and the substrate features were measured. The results showed that community responded to the presence of guano, cobbles, boulders, and substrate heterogeneity. The positive relationship between non-troglobitic species composition with the presence of guano reinforces the importance of food resources for structuring invertebrate cave communities in Guatemalan caves. -
A Stable Phylogenomic Classification of Travunioidea (Arachnida, Opiliones, Laniatores) Based on Sequence Capture of Ultraconserved Elements
A stable phylogenomic classification of Travunioidea (Arachnida, Opiliones, Laniatores) based on sequence capture of ultraconserved elements The Harvard community has made this article openly available. Please share how this access benefits you. Your story matters Citation Derkarabetian, Shahan, James Starrett, Nobuo Tsurusaki, Darrell Ubick, Stephanie Castillo, and Marshal Hedin. 2018. “A stable phylogenomic classification of Travunioidea (Arachnida, Opiliones, Laniatores) based on sequence capture of ultraconserved elements.” ZooKeys (760): 1-36. doi:10.3897/zookeys.760.24937. http://dx.doi.org/10.3897/zookeys.760.24937. Published Version doi:10.3897/zookeys.760.24937 Citable link http://nrs.harvard.edu/urn-3:HUL.InstRepos:37298544 Terms of Use This article was downloaded from Harvard University’s DASH repository, and is made available under the terms and conditions applicable to Other Posted Material, as set forth at http:// nrs.harvard.edu/urn-3:HUL.InstRepos:dash.current.terms-of- use#LAA A peer-reviewed open-access journal ZooKeys 760: 1–36 (2018) A stable phylogenomic classification of Travunioidea... 1 doi: 10.3897/zookeys.760.24937 RESEARCH ARTICLE http://zookeys.pensoft.net Launched to accelerate biodiversity research A stable phylogenomic classification of Travunioidea (Arachnida, Opiliones, Laniatores) based on sequence capture of ultraconserved elements Shahan Derkarabetian1,2,7 , James Starrett3, Nobuo Tsurusaki4, Darrell Ubick5, Stephanie Castillo6, Marshal Hedin1 1 Department of Biology, San Diego State University, San -
Arachnides 55
The electronic publication Arachnides - Bulletin de Terrariophile et de Recherche N°55 (2008) has been archived at http://publikationen.ub.uni-frankfurt.de/ (repository of University Library Frankfurt, Germany). Please include its persistent identifier urn:nbn:de:hebis:30:3-371590 whenever you cite this electronic publication. ARACHNIDES BULLETIN DE TERRARIOPHILIE ET DE RECHERCHES DE L’A.P.C.I. (Association Pour la Connaissance des Invertébrés) 55 DECEMBRE 2008 ISSN 1148-9979 1 EDITORIAL Voici le second numéro d’Arachnides depuis sa reparution. Le numéro 54 a été bien reçu par les lecteurs, sa version électronique facilitant beaucoup sa diffusion (rapidité et gratuité !). Dans ce numéro 55, de nombreux articles informent sur de nouvelles espèces de Theraphosidae ainsi qu’un bilan des nouvelles espèces de scorpions pour l’année 2007. Les lecteurs qui auraient des articles à soumettre, peuvent nous les faire parvenir par courrier éléctronique ou à l’adresse de l’association : DUPRE, 26 rue Villebois Mareuil, 94190 Villeneuve St Geoges. Une version gratuite est donc disponible sur Internet sur simple demande par l’intermédiaire du courrier électronique : [email protected]. Les annonces de parution sont relayées sur divers sites d’Internet et dans la presse terrariophile. L’A.P.C.I. vous annonce également que la seconde exposition Natures Exotiques de Verrières-le-Buisson aura lieu les 20 et 21 juin 2009. Dès que nous aurons la liste des exposants, nous en ferons part dans un futur numéro. Gérard DUPRE. E X O N A T U R E S I Mygales Q Scorpions U Insectes E Reptiles S Plantes carnivores Cactus..... -
Anatomically Modern Carboniferous Harvestmen Demonstrate Early Cladogenesis and Stasis in Opiliones
ARTICLE Received 14 Feb 2011 | Accepted 27 Jul 2011 | Published 23 Aug 2011 DOI: 10.1038/ncomms1458 Anatomically modern Carboniferous harvestmen demonstrate early cladogenesis and stasis in Opiliones Russell J. Garwood1, Jason A. Dunlop2, Gonzalo Giribet3 & Mark D. Sutton1 Harvestmen, the third most-diverse arachnid order, are an ancient group found on all continental landmasses, except Antarctica. However, a terrestrial mode of life and leathery, poorly mineralized exoskeleton makes preservation unlikely, and their fossil record is limited. The few Palaeozoic species discovered to date appear surprisingly modern, but are too poorly preserved to allow unequivocal taxonomic placement. Here, we use high-resolution X-ray micro-tomography to describe two new harvestmen from the Carboniferous (~305 Myr) of France. The resulting computer models allow the first phylogenetic analysis of any Palaeozoic Opiliones, explicitly resolving both specimens as members of different extant lineages, and providing corroboration for molecular estimates of an early Palaeozoic radiation within the order. Furthermore, remarkable similarities between these fossils and extant harvestmen implies extensive morphological stasis in the order. Compared with other arachnids—and terrestrial arthropods generally—harvestmen are amongst the first groups to evolve fully modern body plans. 1 Department of Earth Science and Engineering, Imperial College, London SW7 2AZ, UK. 2 Museum für Naturkunde at the Humboldt University Berlin, D-10115 Berlin, Germany. 3 Department of Organismic and Evolutionary Biology and Museum of Comparative Zoology, Harvard University, Cambridge, Massachusetts 02138, USA. Correspondence and requests for materials should be addressed to R.J.G. (email: [email protected]) and for phylogenetic analysis, G.G. (email: [email protected]). -
Scope: Munis Entomology & Zoology Publishes a Wide Variety of Papers
_____________ Mun. Ent. Zool. Vol. 2, No. 1, January 2007___________ I MUNIS ENTOMOLOGY & ZOOLOGY Ankara / Turkey II _____________ Mun. Ent. Zool. Vol. 2, No. 1, January 2007___________ Scope: Munis Entomology & Zoology publishes a wide variety of papers on all aspects of Entomology and Zoology from all of the world, including mainly studies on systematics, taxonomy, nomenclature, fauna, biogeography, biodiversity, ecology, morphology, behavior, conservation, pa!eobiology and other aspects are appropriate topics for papers submitted to Munis Entomology & Zoology. Submission of Manuscripts: Works published or under consideration elsewhere (including on the internet) will not be accepted. At first submission, one double spaced hard copy (text and tables) with figures (may not be original) must be sent to the Editors, Dr. Hüseyin Özdikmen for publication in MEZ. All manuscripts should be submitted as Word file or PDF file in an e-mail attachment. If electronic submission is not possible due to limitations of electronic space at the sending or receiving ends, unavailability of e-mail, etc., we will accept ―hard‖ versions, in triplicate, accompanied by an electronic version stored in a floppy disk, a CD-ROM. Review Process: When submitting manuscripts, all authors provides the name, of at least three qualified experts (they also provide their address, subject fields and e-mails). Then, the editors send to experts to review the papers. The review process should normally be completed within 45-60 days. After reviewing papers by reviwers: Rejected papers are discarded. For accepted papers, authors are asked to modify their papers according to suggestions of the reviewers and editors. Final versions of manuscripts and figures are needed in a digital format. -
Biodiversity of the Huautla Cave System, Oaxaca, Mexico
diversity Communication Biodiversity of the Huautla Cave System, Oaxaca, Mexico Oscar F. Francke, Rodrigo Monjaraz-Ruedas † and Jesús A. Cruz-López *,‡ Colección Nacional De Arácnidos, Departamento de Zoología, Instituto de Biología, Universidad Nacional Autónoma de México, Ciudad Universitaria, Coyoacán, Mexico City C. P. 04510, Mexico; [email protected] (O.F.F.); [email protected] (R.M.-R.) * Correspondence: [email protected] † Current address: San Diego State University, San Diego, CA 92182, USA. ‡ Current address: Instituto Nacional de Investigaciones Agrícolas y Pecuarias del Valle de Oaxaca, Santo Domingo Barrio Bajo, Etla C. P. 68200, Mexico. Abstract: Sistema Huautla is the deepest cave system in the Americas at 1560 m and the fifth longest in Mexico at 89,000 m, and it is a mostly vertical network of interconnected passages. The surface landscape is rugged, ranging from 3500 to 2500 masl, intersected by streams and deep gorges. There are numerous dolinas, from hundreds to tens of meters in width and depth. The weather is basically temperate subhumid with summer rains. The average yearly rainfall is approximately 2500 mm, with a monthly average of 35 mm for the driest times of the year and up to 500 mm for the wettest month. All these conditions play an important role for achieving the highest terrestrial troglobite diversity in Mexico, containing a total of 35 species, of which 27 are possible troglobites (16 described), including numerous arachnids, millipedes, springtails, silverfish, and a single described species of beetles. With those numbers, Sistema Huautla is one of the richest cave systems in the world. Keywords: troglobitics; arachnids; insects; millipedes Citation: Francke, O.F.; Monjaraz-Ruedas, R.; Cruz-López, J.A.