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Zootaxa, Molecular Phylogeny, Classification, and Biogeography Of
Zootaxa 2067: 1–28 (2009) ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ Article ZOOTAXA Copyright © 2009 · Magnolia Press ISSN 1175-5334 (online edition) Molecular phylogeny, classification, and biogeography of West Indian racer snakes of the Tribe Alsophiini (Squamata, Dipsadidae, Xenodontinae) S. BLAIR HEDGES1, ARNAUD COULOUX2, & NICOLAS VIDAL3,4 1Department of Biology, 208 Mueller Lab, Pennsylvania State University, University Park, PA 16802-5301 USA. E-mail: [email protected] 2Genoscope. Centre National de Séquençage, 2 rue Gaston Crémieux, CP5706, 91057 Evry Cedex, France www.genoscope.fr 3UMR 7138, Département Systématique et Evolution, Muséum National d’Histoire Naturelle, CP 26, 57 rue Cuvier, 75005 Paris, France 4Corresponding author. E-mail : [email protected] Abstract Most West Indian snakes of the family Dipsadidae belong to the Subfamily Xenodontinae and Tribe Alsophiini. As recognized here, alsophiine snakes are exclusively West Indian and comprise 43 species distributed throughout the region. These snakes are slender and typically fast-moving (active foraging), diurnal species often called racers. For the last four decades, their classification into six genera was based on a study utilizing hemipenial and external morphology and which concluded that their biogeographic history involved multiple colonizations from the mainland. Although subsequent studies have mostly disagreed with that phylogeny and taxonomy, no major changes in the classification have been proposed until now. Here we present a DNA sequence analysis of five mitochondrial genes and one nuclear gene in 35 species and subspecies of alsophiines. Our results are more consistent with geography than previous classifications based on morphology, and support a reclassification of the species of alsophiines into seven named and three new genera: Alsophis Fitzinger (Lesser Antilles), Arrhyton Günther (Cuba), Borikenophis Hedges & Vidal gen. -
Zootaxa, Molecular Phylogeny, Classification, and Biogeography of West Indian Racer
Zootaxa 2067: 1–28 (2009) ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ Article ZOOTAXA Copyright © 2009 · Magnolia Press ISSN 1175-5334 (online edition) Molecular phylogeny, classification, and biogeography of West Indian racer snakes of the Tribe Alsophiini (Squamata, Dipsadidae, Xenodontinae) S. BLAIR HEDGES1, ARNAUD COULOUX2, & NICOLAS VIDAL3,4 1Department of Biology, 208 Mueller Lab, Pennsylvania State University, University Park, PA 16802-5301 USA. E-mail: [email protected] 2Genoscope. Centre National de Séquençage, 2 rue Gaston Crémieux, CP5706, 91057 Evry Cedex, France www.genoscope.fr 3UMR 7138, Département Systématique et Evolution, Muséum National d’Histoire Naturelle, CP 26, 57 rue Cuvier, 75005 Paris, France 4Corresponding author. E-mail : [email protected] Abstract Most West Indian snakes of the family Dipsadidae belong to the Subfamily Xenodontinae and Tribe Alsophiini. As recognized here, alsophiine snakes are exclusively West Indian and comprise 43 species distributed throughout the region. These snakes are slender and typically fast-moving (active foraging), diurnal species often called racers. For the last four decades, their classification into six genera was based on a study utilizing hemipenial and external morphology and which concluded that their biogeographic history involved multiple colonizations from the mainland. Although subsequent studies have mostly disagreed with that phylogeny and taxonomy, no major changes in the classification have been proposed until now. Here we present a DNA sequence analysis of five mitochondrial genes and one nuclear gene in 35 species and subspecies of alsophiines. Our results are more consistent with geography than previous classifications based on morphology, and support a reclassification of the species of alsophiines into seven named and three new genera: Alsophis Fitzinger (Lesser Antilles), Arrhyton Günther (Cuba), Borikenophis Hedges & Vidal gen. -
Notes on the Natural History of The
WWW.IRCF.ORG/REPTILESANDAMPHIBIANSJOURNALTABLE OF CONTENTS IRCF REPTILES & AMPHIBIANS IRCF REPTILES • VOL15, & N AMPHIBIANSO 4 • DEC 2008 189• 20(3):130–139 • SEP 2013 IRCF REPTILES & AMPHIBIANS CONSERVATION AND NATURAL HISTORY TABLE OF CONTENTS FEATURE ARTICLES . ChasingNotes Bullsnakes (Pituophis catenifer on sayi) in Wisconsin:the Natural History On the Road to Understanding the Ecology and Conservation of the Midwest’s Giant Serpent ...................... Joshua M. Kapfer 190 . The Shared History of Treeboas (Corallus grenadensis) and Humans on Grenada: ofA Hypothetical the Excursion Hispaniolan ............................................................................................................................ Brown RobertRacer, W. Henderson 198 HaitiophisRESEARCH ARTICLES anomalus (Squamata: Dipsadidae), . The Texas Horned Lizard in Central and Western Texas ....................... Emily Henry, Jason Brewer, Krista Mougey, and Gad Perry 204 . The Knight Anole (Anolis equestris) in Florida in the ............................................. SouthernBrian J. Camposano, Kenneth Dominican L. Krysko, Kevin M. Enge, Ellen M. Donlan, andRepublic Michael Granatosky 212 MiguelCONSERVATION A. Landestoy T.¹, ALERT Robert W. Henderson2, Ernst Rupp3, Cristian Marte4, and Robert A. Ortíz¹ . World’s Mammals in Crisis ............................................................................................................................................................. 220 ¹Sociedad. More Ornitológica Than Mammals de ......................................................................................................................................................................la -
Anolis Tandai, a New Dietary Record for the Amazon Ringed Snake, Rhinobothryum Lentiginosum (Scopoli, 1785) (Squamata: Colubridae)
Herpetology Notes, volume 13: 981-987 (2020) (published online on 26 November 2020) Anolis tandai, a new dietary record for the Amazon ringed snake, Rhinobothryum lentiginosum (Scopoli, 1785) (Squamata: Colubridae) Luis A. García–Ayachi1,2,3,*, Mallory Wittwer3, and Christopher Kirkby3 The Amazon banded snake is a rare, infrequently because they observed these snakes on the ground observed species of squamate with only a few (Martins and Oliveira, 1998; Doan and Arriaga, 2000; specimens stored in biological collections, despite its Duellman, 2005; Ribeiro Duarte, 2010; Avila–Pires et widespread distribution (Cunha and Nascimento, 1978). al., 2010). However, dietary information suggests that R. This snake lives in the lowland Amazonian forests of lentiginosum is a lizard specialist that feeds on a variety Brazil, Venezuela, Guyana, Suriname, French Guiana, of terrestrial and arboreal species that range in size from Colombia, Ecuador, Paraguay, Bolivia, and Peru (Peters small species, such as Gonatodes spp. to the larger and Orejas–Miranda, 1970; Miranda et al., 2009; Iguana iguana (Table 1). Rhinobothryum lentiginosum Reynolds and MacCulloch, 2012; Uetz et al., 2020). likely forages in tree and bushes, and possibly preys Although it has been recorded in primary forest (Cunha on night–sleeping lizards (Oliveira and Martins, 1998; and Nascimento, 1978; Cunha et al., 1985; Martins Martins and Oliveira, 1998; Vitt et al., 2000; Duellman, and Oliveira, 1998; Fraga et al., 2014), some records 2005; Ribeiro Duarte, 2010), and occasionally on frogs, demonstrate that R. lentiginosum also inhabits secondary small birds and mammals (Zimmerman and Rodrigues, forest (Venegas and Couceiro, 2017), and more open, 1990; Avila–Pires et al., 2010). -
Phylogenetic Relationships Among West Indian Xenodontine Snakes (Serpentes; Colubridae) with Comments on the Phylogeny of Some Mainland Xenodontines
Contemporary Herpetology ISSN 1094-2246 1999 Number 2 8 June 1999 PHYLOGENETIC RELATIONSHIPS AMONG WEST INDIAN XENODONTINE SNAKES (SERPENTES; COLUBRIDAE) WITH COMMENTS ON THE PHYLOGENY OF SOME MAINLAND XENODONTINES Brian I. Crother ([email protected]) Crother/White Molecular Phylogenetics Laboratory, Department of Biological Sciences, Southeastern Louisiana University, Hammond, Louisiana 70402 Abstract - The evolutionary relationships of the West Indian (W. I.) xenodontine snake assemblage has been considered as either monophyletic or paraphyletic. Allozyme data from protein electrophoresis were used to estimate the phylogeny of the W. I. xenodontine snakes. Forty-two species from 25 genera (mainland and W. I. taxa) were examined. The phylogenetic relationships were estimated using parsimony analyses with successive approximation weighting on the data coded two ways: (1) the allele as the character and (2) the locus as the character. The most parsimonious trees from both coding methods indicated a non-monophyletic W. I. xenodontine assemblage. Three W.I. groups were recovered in both coding methods: (1) Jamaican Arrhyton and Darlingtonia, (2) Uromacer and the Cuban Arrhyton, and (3) Alsophis, Ialtris, and the South American Alsophis elegans. The relationships of Hypsirhynchus, Antillophis and Arrhyton exiguum were unstable. Nomenclatural changes are recommended for Darlingtonia, Arrhyton, Ialtris and Alsophis. INTRODUCTION Dunn (1932) provided a general hypothesis of the relationships of the West Indian xenodontines based mainly on numbers of scale pits. He concluded that only three endemic genera were represented and contained the indicated Contemporary Herpetology 1999, Number 2 2 nominal species: Arrhyton (redimitum, taeniatum, vittatum) on Cuba, and Ialtris (dorsalis) and Uromacer (oxyrhynchus, frenatus, catesbyi, wetmorei, scandax, dorsalis) on Hispaniola. -
Caribbean Skinks Listing Petition
BEFORE THE SECRETARY OF THE INTERIOR PETITION TO LIST NINE SPECIES OF CARIBBEAN SKINKS AS ENDANGERED UNDER THE ENDANGERED SPECIES ACT Puerto Rican Skink (Spondylurus nitidus) at Guajataca State Forest in Quebradilllas, Puerto Rico. © Puerto Rico Wildlife: Alfredo Colón. Http://alfredocolon.zenfolio.com. CENTER FOR BIOLOGICAL DIVERSITY February 11, 2014 i Notice of Petition _____________________________________________________________________________ Sally Jewell, Secretary U.S. Department of the Interior 1849 C Street NW Washington, D.C. 20240 [email protected] Dan Ashe, Director U.S. Fish and Wildlife Service 1849 C Street NW Washington, D.C. 20240 [email protected] Douglas Krofta, Chief Branch of Listing, Endangered Species Program U.S. Fish and Wildlife Service Room 420 4401 North Fairfax Drive Arlington, VA 22203 [email protected] Cindy Dohner, Regional Director Region 4 U.S. Fish and Wildlife Service 1875 Century Boulevard NE, Suite 400 Atlanta, GA 30345 [email protected] PETITIONERS Collette L. Adkins Giese Amphibian and Reptile Senior Attorney Center for Biological Diversity PO Box 339 Circle Pines, MN 55014-0339 [email protected] Tierra Curry Senior Scientist Center for Biological Diversity PO Box 11374 Portland, OR 97211 [email protected] ii Dr. Renata Platenberg Reptile Ecologist St. Thomas, U.S. Virgin Islands [email protected] Submitted this 11th day of February, 2014 Pursuant to Section 4(b) of the Endangered Species Act (“ESA”), 16 U.S.C. § 1533(b); Section 553(e) of the Administrative Procedure Act, 5 U.S.C. § 553(e); and 50 C.F.R. § 424.14(a), the Center for Biological Diversity and Dr. Renata Platenberg hereby petition the Secretary of the Interior, through the United States Fish and Wildlife Service (“USFWS”), to list nine species of Caribbean skinks as endangered species and to designate critical habitat to ensure recovery. -
Table S3.1. Habitat Use of Sampled Snakes. Taxonomic Nomenclature
Table S3.1. Habitat use of sampled snakes. Taxonomic nomenclature follows the current classification indexed in the Reptile Database ( http://www.reptile-database.org/ ). For some species, references may reflect outdated taxonomic status. Individual species are coded for habitat association according to Table 3.1. References for this table are listed below. Habitat use for species without a reference were inferred from sister taxa. Broad Habitat Specific Habit Species Association Association References Acanthophis antarcticus Semifossorial Terrestrial-Fossorial Cogger, 2014 Acanthophis laevis Semifossorial Terrestrial-Fossorial O'Shea, 1996 Acanthophis praelongus Semifossorial Terrestrial-Fossorial Cogger, 2014 Acanthophis pyrrhus Semifossorial Terrestrial-Fossorial Cogger, 2014 Acanthophis rugosus Semifossorial Terrestrial-Fossorial Cogger, 2014 Acanthophis wellsi Semifossorial Terrestrial-Fossorial Cogger, 2014 Achalinus meiguensis Semifossorial Subterranean-Debris Wang et al., 2009 Achalinus rufescens Semifossorial Subterranean-Debris Das, 2010 Acrantophis dumerili Terrestrial Terrestrial Andreone & Luiselli, 2000 Acrantophis madagascariensis Terrestrial Terrestrial Andreone & Luiselli, 2000 Acrochordus arafurae Aquatic-Mixed Intertidal Murphy, 2012 Acrochordus granulatus Aquatic-Mixed Intertidal Lang & Vogel, 2005 Acrochordus javanicus Aquatic-Mixed Intertidal Lang & Vogel, 2005 Acutotyphlops kunuaensis Fossorial Subterranean-Burrower Hedges et al., 2014 Acutotyphlops subocularis Fossorial Subterranean-Burrower Hedges et al., 2014 -
Late Quaternary Reptile Extinctions : Size Matters, Insularity Dominates
This is a repository copy of Late Quaternary reptile extinctions : size matters, insularity dominates. White Rose Research Online URL for this paper: http://eprints.whiterose.ac.uk/158007/ Version: Accepted Version Article: Slavenko, A. orcid.org/0000-0002-3265-7715, Tallowin, O.J.S., Itescu, Y. et al. (2 more authors) (2016) Late Quaternary reptile extinctions : size matters, insularity dominates. Global Ecology and Biogeography, 25 (11). pp. 1308-1320. ISSN 1466-822X https://doi.org/10.1111/geb.12491 This is the peer reviewed version of the following article: Slavenko, A., Tallowin, O.J.S., Itescu, Y., Raia, P. and Meiri, S. (2016), Late Quaternary reptile extinctions: size matters, insularity dominates. Global Ecol. Biogeogr., 25: 1308-1320., which has been published in final form at https://doi.org/10.1111/geb.12491. This article may be used for non- commercial purposes in accordance with Wiley Terms and Conditions for Use of Self- Archived Versions. Reuse Items deposited in White Rose Research Online are protected by copyright, with all rights reserved unless indicated otherwise. They may be downloaded and/or printed for private study, or other acts as permitted by national copyright laws. The publisher or other rights holders may allow further reproduction and re-use of the full text version. This is indicated by the licence information on the White Rose Research Online record for the item. Takedown If you consider content in White Rose Research Online to be in breach of UK law, please notify us by emailing [email protected] including the URL of the record and the reason for the withdrawal request. -
(Rhinocheilus Lecontei), a `Specialist' Predator?
J. Zool., Lond. (1999) 248, 489±499 # 1999 The Zoological Society of London Printed in the United Kingdom Food habits of the long-nosed snake (Rhinocheilus lecontei), a `specialist' predator? Javier A. RodrõÂ guez-Robles* and Harry W. Greene{ Museum of Vertebrate Zoology and Department of Integrative Biology, University of California, Berkeley, CA 94720-3160, U.S.A. (Accepted 4 November 1998) Abstract We explored predator specialization by examining dietary variation in the widespread North American long-nosed snake, Rhinocheilus lecontei. We examined the stomach contents of more than 800 museum specimens, and supplemented our ®ndings with published dietary records. Sixty-six percent of 135 prey eaten by R. lecontei were lizards, 26% were mammals, and 7% were squamate eggs; teiid lizards of the genus Cnemidophorus comprised 72% (64 of 89) of all lizard prey. Ninety-four percent of specimens with food contained a single item, and all 79 prey for which we determined direction of ingestion were swallowed head-®rst. Among those specimens containing food, long-nosed snakes from Mexico were signi®cantly larger, and ate a higher percentage of mammals, than specimens from the United States. Larger R. lecontei sometimes fed on larger prey, and perhaps excluded smaller prey from their diet. To assess relative trophic niche breadth for R. lecontei, we compared the percentage of lizards and of Cnemidophorus in the diet of long-nosed snakes with the percentage with which other terrestrial snakes consumed lizards as their modal prey, and with which these same snakes ate members of their preferred lizard prey genus. Although we uncovered no statistical basis for labelling R. -
Definition of the Caribbean Islands Biogeographic Region, with Checklist and Recommendations for Standardized Common Names of Amphibians and Reptiles
caribbean herpetology article Definition of the Caribbean Islands biogeographic region, with checklist and recommendations for standardized common names of amphibians and reptiles S. Blair Hedges1,*, Robert Powell2, Robert W. Henderson3, Sarah Hanson1, and John C. Murphy4 1Center for Biodiversity, Temple University, 1925 N. 12th Street, Philadelphia, Pensylvania 19122, USA. 2Department of Biology, Avila University, 11901 Wornall Road, Kansas City, Missouri 64145, USA. 3Vertebrate Zoology, Milwaukee Public Museum, 800 West Wells Street, Milwaukee, Wisconsin 53233, USA. 4Science and Education, Field Museum of Natural History, 1400 Lake Shore Drive, Chicago, IL 60616 USA. *Corresponding author ([email protected]) Edited by: R. Graham Reynolds. Date of publication: 28 May 2019. Citation: Hedges SB, Powell R, Henderson RW, Hanson S, and Murphy JC. 2019. Definition of the Caribbean Islands biogeographic region, with checklist and recommendations for standardized common names of amphibians and reptiles. Caribbean Herpetology, 67, 1–53. DOI: 10.31611/ch.67 Abstract To facilitate biological study we define “Caribbean Islands” as a biogeographic region that includes the An- tilles, the Bahamas, and islands bordering Central and South America separated from mainland areas by at least 20 meters of water depth. The advantages of this definition are that it captures nearly all islands with endemic species and with at least some Antillean-derived species, and still circumscribes a region of high biodiversity and biogeographic significance. We argue that Caribbean islands, in this expanded sense, are also cohesive from a conservation standpoint in that they share high human population densities and sim- ilar conservation threats. A disadvantage of this definition, strictly applied, is that it includes some islands (e.g., Trinidad) that have mostly mainland species. -
Introduced Amphibians and Reptiles in the Greater Caribbean: Patterns and Conservation Implications
Introduced amphibians and reptiles in the greater Caribbean: Patterns and conservation implications Robert Powell1, Robert W. Henderson2, Michael C. Farmer3, Michel Breuil4, Arthur C. Echternacht5, Gerard van Buurt6, Christina M. Romagosa7, Gad Perry8,9 1 Department of Biology, Avila University, Kansas City, MO 64145, USA 2 Section of Vertebrate Zoology, Milwaukee Public Museum, Milwaukee, WI 53233, USA 3 Department of Agricultural and Applied Economics, Texas Tech University, Box 42132, Lubbock, TX 79409, USA 4 Département de Systématique et d’Évolution, Taxonomie et Collections, Reptiles et Amphibiens, Muséum national d’Histoire naturelle, 75005 Paris, France 5 Department of Ecology and Evolutionary Biology, University of Tennessee, Knoxville, TN 37996, USA 6 Kaya Oy Sprock 18, Curaçao 7 Department of Biological Sciences, Auburn University, Auburn, AL 36849, USA 8 Department of Natural Resource Management, Texas Tech University, Lubbock, TX 79409, USA 9 Corresponding author; e-mail: [email protected] Abstract. Non-native species are a growing worldwide conservation problem, often second only to habitat destruction and alteration as a cause of extirpations and extinctions. Introduced taxa affect native faunas through competition, predation, hybridization, transmission of diseases, and even by confounding conservation efforts focused on superficially similar endemic species. The number of known introductions of amphibian and reptilian species continues to grow. Herein, we document the arrival and establishment of alien amphibians and reptiles in the greater Caribbean region and the means by which they arrived. These include 130 species (25 amphibians and 105 reptiles) responsible for 364 individual introductions, of which 70.3% resulted in populations established for at least a short period. -
REPTILIA: SQUAMATA: DIPSADIDAE Cubophis Vudii
903.1 REPTILIA: SQUAMATA: DIPSADIDAE Cubophis vudii Catalogue of American Amphibians and Reptiles. Powell, R. 2014. Cubophis vudii. Cubophis vudii (Cope) Bahamian Racer, Bahamian Brown Racer Alsophis vudii Cope 1862:74. Type locality, “New Providence Id., Bahamas.” Syntypes, Academy of Natural Sciences of Philadelphia (ANSP) 5567, 5569–71, 5598–99, four adults (or subadults) and two juveniles (based on SVL Figure 1. An adult Cubophis vudii vudii from measurements of 53.3 cm, 43.5 cm, Cape Eleuthera, Eleuthera. Photograph by the 41.3 cm, 24.1 cm, 28.9 cm, and 40.5 author. cm, respectively; all measurements on preserved specimens), sexes unknown, sandy, taupe, gray, and reddish to reddish donated by Dr. H. C. Wood, Jr. on 7 May brown, dark brown, and black. Variable 1861 (examined by N. Gilmore at the dorsal patterns include uniform coloration, request of the author). faint lateral stripes, flecked or suffused with Dromicus angulifer: Boulenger 1894:120 darker color, irregular, diffuse banding, (part). combinations of flecking and banding, or Alsophis angulifer vudii: Stejneger 1905:337. a combination of faint lateral stripes and Alsophis rudii: Engelmann and Obst 1981:185. flecking. Tops of heads can be unpatterned or Lapsus. with a diffuse or sharply defined patterns that Alosophis vudii: Buckner 1993:19. Lapsus. might or might not include preorbital stripes Ocyophis vudii: Zaher et al. 2009:147. See but almost always with dark postorbital Phylogenetic Relationships. stripes that terminate on the temporals. In Cubophis vudii: Hedges et al. 2009:9. some populations, supralabials are bright orange, with the orange color extending onto CONTENT.