CHAPTER 15 Practice Exercises 15.1 15.3 (A) C9H18
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Evaluated Gas Phase Basicities and Proton Affinities of Molecules; Heats of Formation of Protonated Molecules
Evaluated Gas Phase Basicities and Proton Affinities of Molecules; Heats of Formation of Protonated Molecules Cite as: Journal of Physical and Chemical Reference Data 13, 695 (1984); https://doi.org/10.1063/1.555719 Published Online: 15 October 2009 Sharon G. Lias, Joel F. Liebman, and Rhoda D. Levin ARTICLES YOU MAY BE INTERESTED IN Evaluated Gas Phase Basicities and Proton Affinities of Molecules: An Update Journal of Physical and Chemical Reference Data 27, 413 (1998); https:// doi.org/10.1063/1.556018 Density-functional thermochemistry. III. The role of exact exchange The Journal of Chemical Physics 98, 5648 (1993); https://doi.org/10.1063/1.464913 A consistent and accurate ab initio parametrization of density functional dispersion correction (DFT-D) for the 94 elements H-Pu The Journal of Chemical Physics 132, 154104 (2010); https://doi.org/10.1063/1.3382344 Journal of Physical and Chemical Reference Data 13, 695 (1984); https://doi.org/10.1063/1.555719 13, 695 © 1984 American Institute of Physics for the National Institute of Standards and Technology. Evaluated Gas Phase Basicities and Proton Affinities of Molecules; Heats of Formation of Protonated Molecules Sharon G. Lias Center for Chemical Physics, National Bureau of Standards, Gaithersburg, MD 20899 Joel F. Liebman Department of Chemistry, University of Maryland Baltimore County, Catonsville, MD 21228 and Rhoda D. Levin Center for Chemical Physics. National Bureau of Standards, Gaithersburg, MD 20899 The available data on gas phase basicities and proton affinities of molecules are compiled and evaluated. Tables giving the molecules ordered (1) according to proton affinity and (2) according to empirical formula, sorted alphabetically are provided. -
Revised Group Additivity Values for Enthalpies of Formation (At 298 K) of Carbon– Hydrogen and Carbon–Hydrogen–Oxygen Compounds
Revised Group Additivity Values for Enthalpies of Formation (at 298 K) of Carbon– Hydrogen and Carbon–Hydrogen–Oxygen Compounds Cite as: Journal of Physical and Chemical Reference Data 25, 1411 (1996); https://doi.org/10.1063/1.555988 Submitted: 17 January 1996 . Published Online: 15 October 2009 N. Cohen ARTICLES YOU MAY BE INTERESTED IN Additivity Rules for the Estimation of Molecular Properties. Thermodynamic Properties The Journal of Chemical Physics 29, 546 (1958); https://doi.org/10.1063/1.1744539 Critical Evaluation of Thermochemical Properties of C1–C4 Species: Updated Group- Contributions to Estimate Thermochemical Properties Journal of Physical and Chemical Reference Data 44, 013101 (2015); https:// doi.org/10.1063/1.4902535 Estimation of the Thermodynamic Properties of Hydrocarbons at 298.15 K Journal of Physical and Chemical Reference Data 17, 1637 (1988); https:// doi.org/10.1063/1.555814 Journal of Physical and Chemical Reference Data 25, 1411 (1996); https://doi.org/10.1063/1.555988 25, 1411 © 1996 American Institute of Physics for the National Institute of Standards and Technology. Revised Group Additivity Values for Enthalpies of Formation (at 298 K) of Carbon-Hydrogen and Carbon-Hydrogen-Oxygen Compounds N. Cohen Thermochemical Kinetics Research, 6507 SE 31st Avenue, Portland, Oregon 97202-8627 Received January 17, 1996; revised manuscript received September 4, 1996 A program has been undertaken for the evaluation and revision of group additivity values (GAVs) necessary for predicting, by means of Benson's group additivity method, thermochemical properties of organic molecules. This review reports on the portion of that program dealing with GAVs for enthalpies of formation at 298.15 K (hereinafter abbreviated as 298 K) for carbon-hydrogen and carbon-hydrogen-oxygen compounds. -
In This Handout, All of Our Functional Groups Are Presented As Condensed Line Formulas, 2D and 3D Formulas and with Nomenclature Prefixes and Suffixes (If Present)
In this handout, all of our functional groups are presented as condensed line formulas, 2D and 3D formulas and with nomenclature prefixes and suffixes (if present). Organic names are built on a foundation of alkanes, alkenes and alkynes. Those examples are presented first and you need to know those rules. The strategies can be found in Chapter 4 of our textbook (alkanes: pages 93-98, cycloalkanes 102-104, alkenes: pages 104-110, alkynes: pages 112-113 and combinations of all of them 113-115). After introducing examples of alkanes, alkenes, alkynes and combinations of them, the functional groups are presented in order of priority. A few nomenclature examples are provided for each of the functional groups. Examples of the various functional groups are presented on pages 115-135 in the textbook. Two overview pages are on pages 136-137. Some functional groups have a suffix name when they are the highest priority functional group and a prefix name when they are not the highest priority group, and these are added to the skeletal names with identifying numbers and stereochemistry terms (E and Z for alkenes, R and S for chiral centers and cis and trans for rings). Several low priority functional groups only have a prefix name. A few additional special patterns are shown on pages 98-102. The only way to learn this topic is practice (over and over). The best practice approach is to actually write out the names (on an extra piece of paper or on a white board, and then do it again). The same functional groups are used throughout the entire course. -
Maximum Topological Distances Based Indices As Molecular Descriptors for QSPR
Int. J. Mol. Sci. 2001, 2, 121-132 International Journal of Molecular Sciences ISSN 1422-0067 www.mdpi.org/ijms/ Maximum Topological Distances Based Indices as Molecular Descriptors for QSPR. 4. Modeling the Enthalpy of Formation of Hydrocarbons from Elements Andrés Mercader 1, Eduardo A. Castro 1,* and Andrey A. Toropov2 1 CEQUINOR, Departamento de Química, Facultad de Ciencias Exactas, Universidad Nacional de la Plata, C.C. 962, La Plata 1900, Argentina. e-mail: [email protected] 2 Andrey A. Toropov, Vostok Innovation Company, S. Azimstreet 4, 100047 Tashkent, Uzbekistan. e-mail: [email protected] * Author to whom correspondence should be addressed. e-mail: [email protected] Received: 9 April 2001 Accepted: 15 June 2001/ Published: 28 June 2001 Abstract: The enthalpy of formation of a set of 60 hydroarbons is calculated on the basis of topological descriptors defined from the distance and detour matrices within the realm of the QSAR/QSPR theory. Linear and non-linear polynomials fittings are made and results show the need to resort to higher-order regression equations in order to get better concordances between theoretical results and experimental available data. Besides, topological indices computed from maximum order distances seems to yield rather satisfactory predictions of heats of formation for hydrocarbons. Keywords: QSPR theory, Detour matrix, Enthalpy of formation, Hydrocarbons, Topologi- cal indices 1. Introduction Graphs have found considerable employment in several chemistry fields, particularly in modeling molecular structure [1-10]. The applications of graphs to the study of structure-property relationships implies the representation of molecules by selected molecular descriptors, often referred to as topo- logical indices [11,12]. -
Trend Analysis for Atmospheric Hydrocarbon Partitioning Using Continuous Thermodynamics
AUGUST 2005 HARSTAD 2977 Trend Analysis for Atmospheric Hydrocarbon Partitioning Using Continuous Thermodynamics K. HARSTAD Jet Propulsion Laboratory, California Institute of Technology, Pasadena, California (Manuscript received 22 April 2004, in final form 31 January 2005) ABSTRACT The partitioning of atmospheric hydrocarbons into vapor and condensed phases when the species count is large is considered using the formalism of continuous thermodynamics. The vapor saturation pressures and condensate species distribution are parameterized using the species normal boiling temperatures. Qualitative trends in activity coefficient values and phase equilibrium behavior that are relevant to the outer planets and Titan are discussed in terms of a much simplified perspective on these aspects of partitioning. The trends found are generally consistent with those from other published atmospheric model results. 1. Introduction with particular emphasis on extraterrestrial bodies Hydrocarbons (and possibly derivative, i.e., oxidized without oxidizing environments. These models are in species) are commonly present in small amounts in general, very complex, involving partly the kinetics of a planetary atmospheres (e.g., Earth, the outer planets, large number of chemical reactions as well as turbulent Titan), and may attain a relatively wide range of carbon diffusion of chemical species in the atmosphere (Do- number. Abiotic generation is possible by chemical in- brijevic et al. 2003; Lebonnois et al. 2001; Lee et al. 2000; Moses et al. 2000; Raulin and Bruston 1996). De- teraction of CO (or CO2) with H2 (Raulin and Bruston 1996; Zolotov and Shock 1999) and, more effectively, spite the relative complexity of the models in the cited references, a totally complete and precise description of photochemistry of CH4 (Dobrijevic et al. -
Cometabolic Degradation of Polycyclic Aromatic Hydrocarbons (Pahs) and Aromatic Ethers by Phenol- and Ammonia-Oxidizing Bacteria
AN ABSTRACT OF THE DISSERTATION OF Soon Woong Chang for the degree of Doctor of Philosophy in Civil Engineering presented on November 11, 1997. Title: Cometabolic Degradation of Polycyclic Aromatic Hydrocarbons (PAHs) and Aromatic Ethers by Phenol- and Ammonia-Oxidizing Bacteria Redacted for Privacy Abstract approved: /Kenneth J. Williamson Cometabolic biodegradation processes are potentially useful for the bioremediation of hazardous waste sites. In this study the potential application of phenol- oxidizing and nitrifying bacteria as "priming biocatalysts" was examined in the degradation of polycyclic aromatic hydrocarbons (PAHs), aryl ethers, and aromatic ethers. We observed that a phenol-oxidizing Pseudomonas strain cometabolically degrades a range of 2- and 3-ringed PAHs. A sequencing batch reactor (SBR) was used to overcome the competitive effects between two substrates and the SBR was evaluated as a alternative technology to treat mixed contaminants including phenol and PAHs. We also have demonstrated that the nitrifying bacterium Nitrosomonas europaea can cometabolically degrade a wide range polycyclic aromatic hydrocarbons (PAHs), aryl ethers and aromatic ethers including naphthalene, acenaphthene, diphenyl ether, dibenzofuran, dibenzo-p-dioxin, and anisole. Our results indicated that all the compounds are transformed by N. europaea and that several unusual reactions are involved in these reactions. In the case of naphthalene oxidation, N. europaea generated predominantly 2 naphthol whereas other monooxygenases generate 1-naphthol as the major product. In the case of dibenzofuran oxidation, 3-hydroxydibenzofuran initially accumulated in the reaction medium and was then further transformed to 3-hydroxy nitrodibenzofuran in a pH- and nitrite-dependent abiotic reaction. A similar abiotic transformation reaction also was observed with other hydroxylated aryl ethers and PAHs. -
THE EFFECTS of SEVERAL PAPER CHARACTERISTICS and APPLICATION METHODS on the SUBLIMATION RATE of CYCLODODECANE by Kelli A. Piot
THE EFFECTS OF SEVERAL PAPER CHARACTERISTICS AND APPLICATION METHODS ON THE SUBLIMATION RATE OF CYCLODODECANE by Kelli A. Piotrowski A thesis submitted to the Department of Art In conformity with the requirements for the degree of Master of Art Conservation Queen’s University Kingston, Ontario, Canada (September, 2013) Copyright © Kelli Piotrowski, 2013 ABSTRACT Cyclododecane (CDD) is a waxy, solid cyclic hydrocarbon (C12H24) that sublimes at room temperature and possesses strong hydrophobicity. In paper conservation CDD is used principally as a temporary fixative of water-soluble media during aqueous treatments. Hydrophobicity, ease of reversibility, low toxicity, and absence of residues are reasons often cited for its use over alternative materials although the latter two claims continue to be debated in the literature. The sublimation rate has important implications for treatment planning as well as health and safety considerations given the dearth of reliable information on its toxicity and exposure limits. This study examined how the rate of sublimation is affected by fiber type, sizing, and surface finish as well as delivery in the molten phase and as a saturated solution in low boiling petroleum ether. The effect of warming the paper prior to application was also evaluated. Sublimation was monitored using gravimetric analysis after which samples were tested for residues with gas chromatography-flame ionization detection (GC-FID) to confirm complete sublimation. Water absorbency tests were conducted to determine whether this property is fully reestablished. Results suggested that the sublimation rate of CDD is affected minimally by all of the paper characteristics and application methods examined in this study. The main factors influencing the rate appear to be the thickness and mass of the CDD over a given surface area as well as temperature and ventilation. -
Chapter 21 Organic Chemistry
CHAPTER 21 ORGANIC CHEMISTRY Hydrocarbons 1. A hydrocarbon is a compound composed of only carbon and hydrogen. A saturated hydro- carbon has only carbon-carbon single bonds in the molecule. An unsaturated hydrocarbon has one or more carbon-carbon multiple bonds but may also contain carbon-carbon single bonds. A normal hydrocarbon has one chain of consecutively bonded carbon atoms. A branched hydrocarbon has at least one carbon atom not bonded to the end carbon of a chain of consecutively bonded carbon atoms. Instead, at least one carbon atom forms a bond to an inner carbon atom in the chain of consecutively bonded carbon atoms. 2. To determine the number of hydrogens bonded to the carbons in cyclic alkanes (or any alkane where they may have been omitted), just remember that each carbon has four bonds. In cycloalkanes, only the C−C bonds are shown. It is assumed you know that the remaining bonds on each carbon are C−H bonds. The number of C−H bonds is that number required to give the carbon four total bonds. 3. In order to form, cyclopropane and cyclobutane are forced to form bond angles much smaller than the preferred 109.5° bond angles. Cyclopropane and cyclobutane easily react in order to obtain the preferred 109.5° bond angles. 4. Aromatic hydrocarbons are a special class of unsaturated hydrocarbons based on the benzene ring. Benzene has the formula C6H6. It is a planar molecule (all atoms are in the same plane). Each carbon in benzene is attached to three other atoms; it exhibits trigonal planar geometry with 120° bond angles. -
Conformational Analysis an Important Aspect of Organic Compounds Is That
Conformational Analysis An important aspect of organic compounds is that the compound is not static, but rather has conformational freedom by rotating, stretching and bending about bonds Each different arrangement in space of the atoms is called a “Conformer” (a less used term is a “Rotamer” if change is caused by a bond rotation) Different conformers can have vastly different energies and the relative proportion of each conformer is related to the energy difference between them CH3 H3C H3C CH3 Lower Energy CH3 H To observe the spatial H H H H arrangement of atoms in space, often draw H H H CH 3 conformers in a CH CH3 3 Newman projection 196 Conformational Analysis Conformers will be of different energy due to strain Sources of strain are generally categorized in one of three types: 1) Torsional strain Torsional strain is due to interactions as groups change relative position with a change in torsional bond angle Consider rotation of ethane H H Eclipsed Eclipsed is higher in H H H conformation energy than staggered H due to increased ~3 kcal/mol torsional strain y g r e n E Further rotation will H H convert eclipsed Staggered H H H H conformation back to conformation H H H H staggered H H -60˚ 0˚ 60˚ 120˚ 180˚ 240˚ 197 torsional angle Conformational Analysis 2) van der Waals strain Another source of strain is when groups are placed in positions closer than the sum of their van der Waals radii Consider rotation of butane totally eclipsed eclipsed CH H3C 3 CH H 3 H H H “totally eclipsed” CH3 H H H conformation (which has H largest groups eclipsing each other) is higher in energy than y other eclipsed conformations g r e n E “gauche” conformation is CH3 CH3 H CH3 higher in energy than anti H H (both are “staggered” H H H H H conformations) CH3 anti gauche -60˚ 0˚ 60˚ 120˚ 180˚ 240˚ 198 torsional angle Conformational Analysis The difference in energy thus affects the amount of each conformer present n-Butane CH3 H H H H Majority of CH3 compound is in the anti conformation, hardly any in CH3 H CH eclipsed 3 conformation H H Mole Fraction H Torsional Angle W.L. -
Certificate of Composition Part #: SD-053-011 and SD-053-016 PIANO Blend with Oxygenates ASTM D6730 with Helium Carrier
Hydrocarbon Expert 5.23 Mon Aug 13 19:14:21 2018 Page 1 Certificate of Composition Part #: SD-053-011 and SD-053-016 PIANO Blend with Oxygenates ASTM D6730 with Helium Carrier Summary by Group Group %Wgt %Vol %Mol Avg MW Avg SG Paraffin 10.773 12.215 10.275 8.840 0.081 I-Paraffins 26.014 28.783 21.726 21.347 0.195 Aromatics 28.732 24.560 21.518 23.577 0.216 Mono-Aromatics 27.134 23.330 20.579 22.266 0.204 Naphthalenes 0.783 0.566 0.455 0.643 0.006 Indanes 0.656 0.539 0.391 0.538 0.005 Indenes 0.156 0.123 0.091 0.128 0.001 Naphthenes 3.793 3.734 3.194 3.112 0.028 Mono-Naphthenes 3.732 3.678 3.152 3.062 0.028 Di/Bicyclo-Naphthenes 0.023 0.019 0.014 0.019 0.000 Olefins 9.451 10.364 9.491 7.755 0.071 n-Olefins 2.953 3.377 3.321 2.423 0.022 Iso-Olefins 5.237 5.738 5.043 4.297 0.039 Naphtheno-Olefins 1.022 1.004 0.924 0.839 0.008 Di-Olefins 0.239 0.244 0.203 0.196 0.002 Oxygenates 20.733 19.883 33.521 17.013 0.156 Unidentified 0.504 0.461 0.276 0.414 0.004 Plus 0.000 0.000 0.000 0.000 0.000 100.000 100.000 100.000 82.058 0.750 Recovery = 100.000 Hydrocarbon Expert 5.23 Mon Aug 13 19:14:21 2018 Page 1 Certificate of Composition Part #: SD-053-011 and SD-053-016 PIANO Blend with Oxygenates ASTM D6730 with Helium Carrier Component List Pk# Time RI C# Component %Wgt %Vol %Mol Area 1 7.268 300.00 3 Propane 0.033 0.042 0.061 22.123 2 8.330 354.33 4 i-Butane 0.364 0.491 0.515 247.198 3 8.697 371.49 1 Methanol 5.440 5.155 13.934 1170.401 4 9.010 385.60 4 Isobutene 0.105 0.133 0.153 73.475 5 9.045 387.14 4 Butene-1 0.265 0.318 0.387 185.889 6 9.341 400.00 -
Reactions of OH Radicals with C6АC10 Cycloalkanes in The
ARTICLE pubs.acs.org/JPCA Reactions of OH Radicals with C6ÀC10 Cycloalkanes in the Presence of NO: Isomerization of C7ÀC10 Cycloalkoxy Radicals † † ‡ † ‡ § Sara M. Aschmann, Janet Arey,*, , and Roger Atkinson*, , , † ‡ § Air Pollution Research Center, Department of Environmental Sciences, and Department of Chemistry, University of California, Riverside, California 92521, United States ABSTRACT: Rate constants have been measured for the reactions of OH À ( radicals with a series of C6 C10 cycloalkanes and cycloketones at 298 2K, by a relative rate technique. The measured rate constants (in units of À À À 10 12 cm3 molecule 1 s 1) were cycloheptane, 11.0 ( 0.4; cyclooctane, 13.5 ( 0.4; cyclodecane, 15.9 ( 0.5; cyclohexanone, 5.35 ( 0.10; cyclo- heptanone, 9.57 ( 0.41; cyclooctanone, 15.4 ( 0.7; and cyclodecanone, 20.4 ( 0.8, where the indicated errors are two least-squares standard deviations and do not include uncertainties in the rate constant for the reference compound n-octane. Formation yields of cycloheptanone from cycloheptane (4.2 ( 0.4%), cyclooctanone from cyclooctane (0.85 ( 0.2%), and cyclodecanone from cyclodecane (4.9 ( 0.5%) were also determined by gas chromatography, where the molar yields are in parentheses. Analyses of products by direct air sampling atmospheric pressure ionization mass spectrometry and by combined gas chromatographyÀmass spectrometry showed, in addition to the cycloketones, the presence of cycloalkyl nitrates, cyclic hydroxyketones, hydroxydicarbonyls, hydroxycarbonyl nitrates, and products attributed to carbonyl nitrates and/or cyclic hydroxynitrates. The observed formation of cyclic hydroxyketones from the cycloheptane, cyclooctane and cyclodecane reactions, with estimated molar yields of 46%, 28%, and 15%, respectively, indicates the occurrence of cycloalkoxy radical isomerization. -
Structural Organic Chemistry the Shapes of Molecules Functional Groups Double (Four-Electron) Bond, and Three Lines a Triple (Six-Electron) Bond
STRUCTURAL ORGANIC CHEMISTRY. THE SHAPES OF MOLECULES. FUNCTIONAL GROUPS In this chapter we first briefly review the most important types of covalent bonds encountered in organic substances and the ways in which these bonds are represented in structural formulas. Next we consider the sizes and shapes of organic molecules and how structural formulas written in two dimensions can be translated into three-dimensional models that show the relative posi- tions of the atoms in space. We also discuss models that reflect the relative sizes of the atoms and the way in which the atoms may interfere with each other when in close quarters (steric hindrance). Then we go on to further im- portant aspects of structure-the functional group concept and position isomerism. Our aim is to have you become more familiar with the various kinds of organic compounds and begin to see how the practicing organic chemist visu- alizes molecules and correlates the diverse kinds of structures that he has to deal with in his work. 2-1 STRUCTURAL FORMULAS The building block of structural organic chemistry is the tetravalent carbon atom. With few exceptions, carbon compounds can be formulated with four 2-1 Structural Fbrmulas 31 covalent bonds to each carbon, regardless of whether the combination is with carbon or some other element. The two-electron bond, which is illustrated by the carbon-hydrogen bonds in methane or ethane and the carbon-carbon bond in ethane, is called a single bond. In these and many related substances, each carbon is attached to four other atoms: H:C:H.