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Home , Deoxycytidine deaminase, Geranyltranstransferase, IMP cyclohydrolase, Riboflavin synthase, Tryptophanase

b0053 b0048 b0032 b0031 b0014 b0009 b0116 b0008 b0118 b0115 b0114 b0095 b0085 b0078 b0072 b0054 b0004 b0071 b0003 B number surA folA carA dapB dnaK mog lpdA talB acnB aceF aceE ftsZ murE ilvH leuC imp thrC leuD thrB Gene name 13283 21822 20561 15349 10437 15039 3825 1588 9312 2348 1296 4087 8150 9268 1392 2778 2737 4770 6781 mRNA intensity P P P P P P P P P P P P P P P P P P P mRNA present 19 14 16 32 17 20 41 34 44 22 21 18 42 18 10 7 7 9 9 # of tryptic peptides predicted P P P P P P P P P P P P P P P P P Protein detected - total list 23 15 13 22 13 24 10 4 1 8 3 0 6 0 2 9 5 9 3 # of tryptic peptides detected (total list) P P P P P P P P P P P P P Protein detected - short list 24 10 16 19 12 24 11 5 2 8 3 0 7 1 5 7 0 7 3 # of tryptic peptides detected (short list) P P P P P P P P P P P P P P P P Protein detected - long list 23 15 13 22 13 24 10 4 1 8 3 0 6 0 2 9 0 9 3 # of tryptic peptides detected (long list) P(m) P(m) P(m) P(m) P(m) Proteins detected - membrane sample

# of tryptic peptides 0 0 0 1 0 0 0 4 0 0 0 1 0 0 0 2 0 5 0 detected (membrane sample) GenProt GenProt Membrane protein assignment dihydrofolate reductasetypeI;trimethoprimresistance carbamoyl-phosphate synthetase,glutamine(small)subunit dihydrodipicolinate reductase chaperone Hsp70;DNAbiosynthesis;autoregulatedheatshockproteins required fortheefficientincorporationofmolybdateintomolybdoproteins transaldolase B aconitate hydrase B pyruvate dehydrogenase(dihydrolipoyltransacetylase component) threonine synthase pyruvate dehydrogenase(decarboxylase component) meso-diaminopimelate-adding acetolactate synthaseIII,valinesensitive,smallsubunit 3-isopropylmalate (dehydratase)subunit pyruvate complexes; L-proteinofglycinecleavage complex lipoamide dehydrogenase(NADH); componentof2-oxodehydrogenaseand GTPase cell division;formscircumferentialring;tubulin-likeGTP-binding proteinand isopropylmalate isomerasesubunit membrane proteins(1stmodule) peptidyl-prolyl cis-transisomerase(PPIase),involvedinmaturationofouter homoserine kinase organic solventtolerance

Gene description Metabolism ofsmallmolecules Metabolism ofsmallmolecules Metabolism ofsmallmolecules Cell processes Metabolism ofsmallmolecules Metabolism ofsmallmolecules Metabolism of small molecules Metabolism ofsmallmolecules Metabolism ofsmallmolecules Metabolism ofsmallmolecules Structural elements Metabolism ofsmallmolecules Metabolism ofsmallmolecules Metabolism of small molecules Cell processes Metabolism ofsmallmolecules Cell processes Metabolism ofsmallmolecules Cell processes

Functional category b0238 b0237 b0220 b0215 b0197 b0177 b0172 b0194 b0170 b0169 b0168 b0166 b0161 b0159 b0145 b0136 b0133 b0125 b0121 B number gpt pepD ykfE dnaQ yaeC yaeT frr proS tsf rpsB map dapD htrA pfs dksA yadK panC hpt speE Gene name 16241 22176 11091 2952 1500 3358 4380 3673 1361 9865 3407 4162 1016 1457 5687 1978 2328 756 96 mRNA intensity P P P P P P P P P P P P P P P P P P P mRNA present 19 13 40 29 18 11 16 13 17 15 5 8 9 9 8 5 4 8 8 # of tryptic peptides predicted P P P P P P P P P P P P P P Protein detected - total list 12 11 13 10 0 8 1 0 7 3 2 9 4 1 0 0 5 0 2 # of tryptic peptides detected (total list) P P P P P P P Protein detected - short list 12 1 7 1 0 0 1 3 9 8 2 9 5 2 1 0 6 1 1 # of tryptic peptides detected (short list) P P P P P P P P P P P P P Protein detected - long list 11 13 10 0 8 1 0 0 1 3 2 9 4 1 0 0 5 0 2 # of tryptic peptides detected (long list) P(m) P(m) P(m) Proteins detected - membrane sample

# of tryptic peptides 12 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 1 0 detected (membrane sample) GenProt PHD Membrane protein assignment guanine-hypoxanthine phosphoribosyltransferase aminoacyl-histidine dipeptidase(peptidase D) orf, hypotheticalprotein DNA polymeraseIII,epsilonsubunit proline tRNAsynthetase ribosome releasingfactor putative lipoprotein protein chainelongationfactorEF-Ts orf, hypotheticalprotein 30S ribosomalsubunitproteinS2 methionine aminopeptidase 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase orf, hypotheticalprotein dnaK suppressorprotein putative fimbrialprotein pantothenate synthetase hypoxanthine phosphoribosyltransferase periplasmic serineproteaseDo;heatshockproteinHtrA =putrescineaminopropyltransferase

Gene description Metabolism of small molecules Macromolecule metabolism Open readingframes Macromolecule metabolism Macromolecule metabolism Macromolecule metabolism Miscellaneous Macromolecule metabolism Open readingframes Structural elements Macromolecule metabolism Metabolism ofsmallmolecules Metabolism ofsmallmolecules Macromolecule metabolism Open readingframes Metabolism ofsmallmolecules Metabolism ofsmallmolecules Macromolecule metabolism Metabolism ofsmallmolecules

Functional category b0474 b0437 b0523 b0522 b0494 b0492 b0473 b0469 b0459 b0450 b0436 b0421 b0415 b0369 b0325 b0296 b0273 b0243 b0241 B number adk clpP purE purK tesA ybbN htpG apt ylaD glnK tig ispA ribH hemB yahK ykgM argF proA phoE Gene name 7814 4300 3543 1507 1200 2692 3354 1197 7545 2792 3781 2065 3188 970 963 794 126 98 82 mRNA intensity A A P P P P P P P P P P P P P P P P P mRNA present 13 12 12 12 37 24 12 14 16 13 20 18 7 5 8 8 7 5 5 # of tryptic peptides predicted P P P P P P P P P P P P P Protein detected - total list 14 17 4 0 0 2 1 4 4 0 2 0 2 2 5 0 6 4 0 # of tryptic peptides detected (total list) P P P P P P P P Protein detected - short list 16 12 4 1 1 4 2 6 2 1 2 0 3 2 7 0 5 5 0 # of tryptic peptides detected (short list) P P P P P P P P P P P P P Protein detected - long list 14 17 4 0 0 2 1 4 4 0 2 0 2 2 5 0 6 4 0 # of tryptic peptides detected (long list)

Proteins detected - membrane sample

# of tryptic peptides 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 detected (membrane sample) MP-GenProt

PHD Membrane protein assignment chaperone Hsp90,heatshockproteinC62.5 trigger factor;amolecularchaperoneinvolvedincelldivision phosphoribosylaminoimidazole carboxylase =AIRcarboxylase,catalytic subunit acyl-CoA thioesteraseI;also functionsasproteaseI putative thioredoxin-likeprotein adenine phosphoribosyltransferase putative nitrogen regulatoryproteinP-II2 (farnesyldiphosphatesynthase) synthase,betachain 5-aminolevulinate dehydratase=porphobilinogensynthase putative putative ribosomalprotein ornithine carbamoyltransferase2,chainF subunit phosphoribosylaminoimidazole carboxylase=AIRcarboxylase,CO(2)-fixing acyltransferase activity adenylate kinaseactivity;pleiotropiceffectsonglycerol-3-phosphate protein F21.5 ATP-dependent proteolyticsubunitofclpA-clpPserineprotease,heatshock gamma-glutamylphosphate reductase outer membraneporeproteinE(E,Ic,NmpAB)

Gene description Cell processes Cell processes Metabolism of small molecules Metabolism ofsmallmolecules Miscellaneous Metabolism ofsmallmolecules Miscellaneous Metabolism ofsmallmolecules Metabolism ofsmallmolecules Metabolism ofsmallmolecules Metabolism ofsmallmolecules Miscellaneous Miscellaneous Metabolism ofsmallmolecules Metabolism of small molecules Metabolism ofsmallmolecules Macromolecule metabolism Metabolism ofsmallmolecules Structural elements

Functional category b0754 b0740 b0729 b0728 b0727 b0726 b0723 b0683 b0680 b0655 b0642 b0607 b0606 b0605 b0595 b0584 b0565 b0578 b0525 B number aroG tolB sucD sucC sucB sucA sdhA fur glnS gltI leuS ybdQ ahpF ahpC entB fepA ompT nfnB ppiB Gene name 40902 20532 11040 18927 38698 47106 5196 6246 7268 4618 1254 5452 3675 1709 3105 1279 2638 8209 911 mRNA intensity P P P P P P P P P P P P P P P P P P P mRNA present 17 15 15 24 15 39 29 31 14 41 24 13 27 17 11 8 6 9 7 # of tryptic peptides predicted P P P P P P P P P P P P P P P P P P P Protein detected - total list 21 12 12 11 5 5 5 5 4 6 5 1 6 9 3 2 6 4 1 # of tryptic peptides detected (total list) P P P P P P P P P P P P Protein detected - short list 19 13 12 13 5 6 9 3 3 7 4 1 6 6 3 0 0 4 3 # of tryptic peptides detected (short list) P P P P P P P P P P P P P P P P P Protein detected - long list 21 12 12 11 5 5 5 5 4 6 5 1 6 9 3 0 0 4 1 # of tryptic peptides detected (long list) P(m) P(m) P(m) P(m) P(m) Proteins detected - membrane sample

# of tryptic peptides 11 0 0 0 3 0 1 0 0 0 0 0 0 0 0 2 0 6 0 detected (membrane sample) MP-GenProt MP-GenProt

Membrane protein assignment periplasmic protein involvedinthetonb-independent uptakeofgroupAcolicins succinyl-CoA synthetase,alpha subunit succinyl-CoA synthetase,beta subunit 2-oxoglutarate dehydrogenase(dihydrolipoyltranssuccinase E2component) 2-oxoglutarate dehydrogenase(decarboxylasecomponent) succinate dehydrogenase,flavoproteinsubunit negative regulator glutamine tRNAsynthetase glutamate/aspartate transportsystemperiplasmicbinding protein leucine tRNAsynthetase orf, hypotheticalprotein alkyl hydroperoxidereductase,F52asubunit;detoxificationofhydroperoxides alkyl hydroperoxidereductase,C22subunit;detoxificationofhydroperoxides 2,3-dihydro-2,3-dihydroxybenzoate synthetase,isochroismatase phenylalanine repressible) 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase(DAHPsynthetase, D outer membranereceptorforferricenterobactin(enterochelin)andcolicinsB oxygen-insensitive NAD(P)Hnitroreductase peptidyl-prolyl cis-transisomeraseB(rotamaseB) outer membraneprotein3b(a),proteaseVII

Gene description Extrachromosomal Metabolism ofsmallmolecules Metabolism ofsmallmolecules Metabolism ofsmallmolecules Metabolism ofsmallmolecules Metabolism ofsmallmolecules Global functions Macromolecule metabolism Cell processes Macromolecule metabolism Open readingframes Cell processes Cell processes Metabolism ofsmallmolecules Metabolism of small molecules Cell processes Cell processes Macromolecule metabolism Structural elements

Functional category b0907 b0903 b0893 b0891 b0888 b0881 b0871 b0863 b0860 b0854 b0814 b0812 b0811 b0782 b0763 b0759 b0756 b0830 b0755 B number serC pflB serS lolA trxB yljA poxB artI artJ potF ompX dps glnH moaB modA galE galM b0830 gpmA Gene name 22609 16120 5838 5044 2667 1462 5279 3121 4421 4456 2781 6175 3559 1742 4960 1054 5169 643 999 mRNA intensity P P P P P P P P P P P P P P P P P P P mRNA present 17 38 22 12 12 23 12 12 14 12 14 17 15 13 21 13

7 6 9 # of tryptic peptides predicted P P P P P P P P P P P P P P P P Protein detected - total list 10 15 13 9 3 4 0 4 2 6 0 2 6 5 4 0 2 6 3 # of tryptic peptides detected (total list) P P P P P P P P P P P P P P Protein detected - short list 14 9 9 5 5 0 4 4 7 0 0 7 7 3 2 5 7 4 9 # of tryptic peptides detected (short list) P P P P P P P P P P P P P P P Protein detected - long list 10 15 13 9 3 4 0 4 2 6 0 0 6 5 4 0 2 6 3 # of tryptic peptides detected (long list) P(m) P(m) Proteins detected - membrane sample

# of tryptic peptides 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 detected (membrane sample) MP-GenProt

Membrane protein assignment 3-phosphoserine aminotransferase formate acetyltransferase 1 serine tRNAsynthetase;also chargesselenocysteintRNAwithserine thioredoxin reductase orf, hypotheticalprotein pyruvate oxidase arginine 3rdtransportsystemperiplasmicbindingprotein arginine 3rdtransportsystemperiplasmicbindingprotein periplasmic putrescine-bindingprotein;permeaseprotein global regulator,starvationconditions periplasmic glutamine-bindingprotein;permease molybdopterin ,proteinB molybdate-binding periplasmicprotein;permease UDP-galactose-4-epimerase galactose-1-epimerase (mutarotase) phosphoglyceromutase 1 outer periplasmic proteineffectstranslocation oflipoproteinsfrominnermembraneto putative transportprotein outer membraneproteinX

Gene description Metabolism of small molecules Metabolism of small molecules Macromolecule metabolism Metabolism ofsmallmolecules Open readingframes Metabolism ofsmallmolecules Cell processes Cell processes Cell processes Global functions Cell processes Metabolism ofsmallmolecules Cell processes Metabolism ofsmallmolecules Metabolism ofsmallmolecules Metabolism ofsmallmolecules Cell processes Cell processes Structural elements

Functional category b1178 b1175 b1136 b1123 b1092 b1083 b1063 b1056 b1048 b1004 b0957 b0945 b0929 b0980 b0930 b0928 b0918 b0911 b0908 B number ycgK minD icdA potD fabD flgL yceB yceI mdoG wrbA ompA pyrD ompF appA asnS aspC kdsB rpsA aroA Gene name 42636 36891 32813 29325 1361 5617 5107 8101 2261 3791 6589 1955 8281 2010 3622 758 289 670 68 mRNA intensity A A P P P P P P P P P P P P P P P P P mRNA present 14 21 14 11 17 11 25 16 20 16 18 23 23 15 23 19 7 7 9 # of tryptic peptides predicted P P P P P P P P P P P P P P P P P Protein detected - total list 13 19 12 16 20 1 5 2 2 0 1 1 7 7 2 6 0 2 3 # of tryptic peptides detected (total list) P P P P P P P P P P Protein detected - short list 10 10 16 14 1 7 5 3 0 0 1 9 5 7 2 2 0 4 3 # of tryptic peptides detected (short list) P P P P P P P P P P P P P P P P Protein detected - long list 13 12 16 20 1 5 2 2 0 0 1 7 7 5 1 2 0 2 3 # of tryptic peptides detected (long list) P(m) P(m) P(m) P(m) P(m) P(m) Proteins detected - membrane sample

# of tryptic peptides 19 0 0 0 0 0 0 0 0 0 1 0 2 1 6 0 0 3 0 detected (membrane sample) MP-GenProt MP-GenProt MP-GenProt

Membrane protein assignment orf, hypothetical protein cell divisioninhibitor, amembraneATPase, activates minC isocitrate dehydrogenase,specific forNADP+ spermidine/putrescine periplasmic transportprotein malonyl-CoA-[acyl-carrier-protein] transacylase flagellar biosynthesis;hook-filamentjunctionprotein orf, hypotheticalprotein periplasmic glucansbiosynthesisprotein trp repressorbindingprotein;affectsassociationof andoperator orf, hypotheticalprotein phosphoanhydride phosphorylase;pH2.5acidphosphatase;periplasmic dihydro-orotate dehydrogenase asparagine tRNAsynthetase aspartate aminotransferase outer membraneprotein3a(II*;G;d) outer membraneprotein1a(Ia;b;F) CTP:CMP-3-deoxy-D-manno-octulosonate transferase 30S ribosomalsubunitproteinS1 5-enolpyruvylshikimate-3-phosphate synthetase

Gene description Open readingframes Cell processes Metabolism ofsmallmolecules Cell processes Metabolism ofsmallmolecules Structural elements Open readingframes Cell processes Metabolism ofsmallmolecules Open readingframes Metabolism ofsmallmolecules Metabolism ofsmallmolecules Macromolecule metabolism Metabolism ofsmallmolecules Structural elements Structural elements Structural elements Structural elements Metabolism ofsmallmolecules

Functional category b1263 b1261 b1260 b1251 b1525 b1427 b1415 b1406 b1376 b1333 b1329 b1324 b1288 b1281 b1243 b1237 b1215 b1203 b1198 B number trpD trpB trpA yciI b1525 rimL aldA ydbC ynaF ydaA mppA tpx fabI pyrF oppA hns kdsA ychF ycgC Gene name 34541 3403 7588 1889 2853 8892 5755 7051 5468 7098 2855 1146 773 349 486 457 982 618 38 mRNA intensity A P P P P P P P P P P P P P P P P P P mRNA present 15 18 14 19 23 12 16 27 11 10 26 15 19 21 2 8 7 7 7 # of tryptic peptides predicted P P P P P P P P P P P P P P P P P Protein detected - total list 19 18 2 4 9 1 1 1 0 2 0 1 9 5 2 4 4 6 7 # of tryptic peptides detected (total list) P P P P P P P P P P P Protein detected - short list 10 13 16 3 6 1 1 1 1 2 0 4 5 4 2 4 4 6 6 # of tryptic peptides detected (short list) P P P P P P P P P P P P P P P P P Protein detected - long list 19 18 2 4 9 1 1 1 0 2 0 1 9 5 2 4 4 6 7 # of tryptic peptides detected (long list) P(m) P(m) Proteins detected - membrane sample

# of tryptic peptides 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 1 0 detected (membrane sample)

Membrane protein assignment synthase,betaprotein tryptophan synthase,alphaprotein orf, hypotheticalprotein oligopeptide transport;periplasmicbindingprotein putative aldehyde dehydrogenase aldehyde dehydrogenase,NAD-linked putative dehydrogenase orf, hypotheticalprotein thiol peroxidase enoyl-[acyl-carrier-protein] reductase(NADH) orotidine-5'-phosphate decarboxylase DNA-binding proteinHLP-II(HU,BH2,HD,NS);pleiotropicregulator 2-dehydro-3-deoxyphosphooctulonate aldolase putative GTP-bindingprotein transferase acetylation ofN-terminalserine of30SribosomalsubunitproteinL7;acetyl putative filamentprotein resistance periplasmic mureintripeptidetransportprotein,alsonegative regulatorofmultiple phosphoribosylanthranilate transferase anthranilate synthasecomponentII,glutamineamidotransferaseand putative PTSsystemenzymeI

Gene description Metabolism ofsmallmolecules Metabolism ofsmallmolecules Open readingframes Cell processes Miscellaneous Metabolism ofsmallmolecules Open readingframes Open readingframes Cell processes Metabolism ofsmallmolecules Metabolism ofsmallmolecules Macromolecule metabolism Structural elements Miscellaneous Structural elements Open readingframes Cell processes Metabolism ofsmallmolecules Miscellaneous

Functional category b1761 b1749 b1740 b1732 b1727 b1723 b1714 b1713 b1702 b1693 b1676 b1662 b1656 b1654 b1650 b1637 b1635 b1613 b1619 B number gdhA xthA nadE katE yniC pfkB pheS pheT ppsA aroD pykF ribE sodB ydhD nemA tyrS gst manA hdhA Gene name 10398 12459 2794 1584 2929 2791 1079 4224 4088 2862 3969 6502 2372 2223 1536 2814 909 628 429 mRNA intensity P P P P P P P P P P P P P P P P P P P mRNA present 23 16 15 30 13 16 18 35 36 15 27 11 18 17 11 18 12

8 5 # of tryptic peptides predicted P P P P P P P P P P P P P P P P P P P Protein detected - total list 12 14 13 8 2 8 7 1 3 8 1 3 2 3 1 7 2 6 1 # of tryptic peptides detected (total list) P P P P P P P P P P Protein detected - short list 11 17 16 14 7 2 7 1 4 8 0 3 3 3 1 8 3 7 2 # of tryptic peptides detected (short list) P P P P P P P P P P P P P P P P P P P Protein detected - long list 12 14 13 8 2 8 7 1 3 8 1 3 2 3 1 7 2 6 1 # of tryptic peptides detected (long list) P(m) Proteins detected - membrane sample

# of tryptic peptides 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 detected (membrane sample)

Membrane protein assignment NADP-specific glutamatedehydrogenase exonuclease III NAD synthetase,prefersNH3 overglutamine catalase; hydroperoxidaseHPII(III) putative phosphatase 6-phosphofructokinase II;suppressorofpfkA phenylalanine tRNAsynthetase,alpha-subunit phenylalanine tRNAsynthetase,beta-subunit phosphoenolpyruvate synthase 3-dehydroquinate dehydratase pyruvate kinaseI(formerlyF),fructosestimulated ,alphachain superoxide dismutase,iron orf, hypotheticalprotein N-ethylmaleimide reductase tyrosine tRNAsynthetase glutathionine S-transferase acids NAD-dependent 7alpha-hydroxysteroiddehydrogenase,dehydroxylationofbile mannose-6-phosphate isomerase

Gene description Metabolism of small molecules Macromolecule metabolism Metabolism ofsmallmolecules Cell processes Open readingframes Metabolism ofsmallmolecules Macromolecule metabolism Macromolecule metabolism Metabolism ofsmallmolecules Metabolism ofsmallmolecules Metabolism ofsmallmolecules Metabolism ofsmallmolecules Cell processes Open readingframes Metabolism ofsmallmolecules Macromolecule metabolism Metabolism ofsmallmolecules Metabolism ofsmallmolecules Metabolism ofsmallmolecules

Functional category b1881 b1876 b1870 b1866 b1857 b2019 b1973 b1967 b1924 b1923 b1920 b1897 b1882 b1852 b1850 b1832 b1823 b1817 b1779 B number cheZ argS yecO aspS yebL hisG b1973 yedU fliD fliC fliY otsB cheY zwf eda b1832 cspC manX gapA Gene name 30711 41263 3503 1559 5358 3393 5516 4018 2415 1831 4057 5528 157 689 997 103 392 231 89 mRNA intensity A A A A P P P P P P P P P P P P P P P mRNA present 10 29 15 33 14 14 10 19 22 18 14 28 10 15 20

8 5 9 5 # of tryptic peptides predicted P P P P P P P P P P P P P P P Protein detected - total list 13 15 13 0 5 2 2 2 3 3 0 0 6 2 0 2 2 4 1 # of tryptic peptides detected (total list) P P P P P P P Protein detected - short list 11 14 10 0 7 2 3 5 4 3 0 0 9 2 0 3 2 2 2 # of tryptic peptides detected (short list) P P P P P P P P P P P P P P P Protein detected - long list 13 15 13 0 5 2 2 2 3 3 0 0 6 2 0 2 2 4 1 # of tryptic peptides detected (long list) P(m) P(m) P(m) Proteins detected - membrane sample

# of tryptic peptides 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 2 detected (membrane sample)

PHD Membrane protein assignment arginine tRNAsynthetase orf, hypotheticalprotein aspartate tRNAsynthetase putative adhesin glucose-6-phosphate dehydrogenase ATP phosphoribosyltransferase orf, hypothetical protein orf, hypotheticalprotein flagellar biosynthesis;filament cappingprotein;enablesfilamentassembly flagellar biosynthesis;flagellin,filamentstructuralprotein putative periplasmicbindingtransportprotein trehalose-6-phosphate phophatase,biosynthetic orf, hypotheticalprotein components chemotaxis regulatortransmitschemoreceptorsignalstoflagelllar motor regulator chemotactic response;CheYproteinphophatase;antagonist ofCheYasswitch aldolase 2-keto-3-deoxygluconate 6-phosphatealdolaseand2-keto-4-hydroxyglutarate cold shockprotein PTS enzymeIIAB,mannose-specific glyceraldehyde-3-phosphate dehydrogenaseA

Gene description Macromolecule metabolism Open readingframes Macromolecule metabolism Miscellaneous Metabolism ofsmallmolecules Metabolism of small molecules Open readingframes Open readingframes Structural elements Structural elements Cell processes Cell processes Open readingframes Cell processes Cell processes Metabolism ofsmallmolecules Miscellaneous Cell processes Metabolism ofsmallmolecules

Functional category b2414 b2155 b2310 b2309 b2297 b2296 b2287 b2150 b2143 b2231 b2185 b2183 b2169 b2114 b2039 b2024 b2023 b2022 b2020 B number cysK cirA argT hisJ pta ackA nuoB mglB cdd gyrA rplY rsuA fruB metG rfbA hisA hisH hisB hisD Gene name 26197 29249 1209 3551 6475 1290 5299 9713 7569 1303 1276 1194 3609 4310 2569 3091 3584 264 878 mRNA intensity P P P P P P P P P P P P P P P P P P P mRNA present 13 30 15 12 31 15 10 20 13 40 14 34 17 13 16 12

6 9 9 # of tryptic peptides predicted P P P P P P P P P P P P P P P P P P Protein detected - total list 15 10 12 11 11 5 4 9 3 2 3 3 1 0 7 1 1 3 5 # of tryptic peptides detected (total list) P P P P P P P P P P P Protein detected - short list 10 10 11 11 12 13 0 6 5 2 3 3 2 0 8 1 3 4 6 # of tryptic peptides detected (short list) P P P P P P P P P P P P P P P P P Protein detected - long list 15 10 12 11 11 0 4 9 3 2 3 3 1 0 7 1 1 3 5 # of tryptic peptides detected (long list) P(m) P(m) P(m) Proteins detected - membrane sample

# of tryptic peptides 2 0 5 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 detected (membrane sample) MP-GenProt

Membrane protein assignment A,O-acetylserinesulfhydrolase A lysine-, arginine-, ornithine-bindingperiplasmic protein galactose-binding transportprotein;receptorforgalactosetaxis histidine-binding periplasmic protein ofhigh-affinityhistidinetransportsystem phosphotransacetylase acetate kinase cytidine/deoxycytidine deaminase NADH dehydrogenaseIchainB DNA gyrase,subunitA,typeIItopoisomerase methionine tRNAsynthetase 50S ribosomalsubunitproteinL25 16S pseudouridylate516synthase PTS system,fructose-specificIIA/fprcomponent glucose-1-phosphate thymidylyltransferase imidazoleglycerolphosphate dehydrataseandhistidinol-phosphatephosphatase gene outer membranereceptorforiron-regulatedcolicinIreceptor;porin;requirestonB imidazolecarboxamide isomerase N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'- phosphoribosyl)-4- phosphate synthaseholoenzyme glutamine amidotransferasesubunitofheterodimerwithHisF=imidazoleglycerol L-histidinal:NAD+ oxidoreductase;L-histidinol:NAD+oxidoreductase

Gene description Metabolism of small molecules Cell processes Cell processes Cell processes Metabolism ofsmallmolecules Metabolism ofsmallmolecules Metabolism ofsmallmolecules Metabolism ofsmallmolecules Macromolecule metabolism Macromolecule metabolism Structural elements Macromolecule metabolism Cell processes Metabolism ofsmallmolecules Metabolism ofsmallmolecules Structural elements Metabolism ofsmallmolecules Metabolism ofsmallmolecules Metabolism ofsmallmolecules

Functional category b2601 b2597 b2592 b2579 b2533 b2476 b2551 b2518 b2514 b2508 b2498 b2480 b2477 b2425 b2421 b2417 b2416 b2478 b2415 B number aroF yfiA clpB yfiD suhB purC glyA ndk hisS guaB upp bcp nlpB cysP cysM crr ptsI dapA ptsH Gene name 11790 10756 19329 20122 13305 1894 1606 6714 3338 5523 6828 5167 3434 3266 1725 8031 8978 394 479 mRNA intensity A P P P P P P P P P P P P P P P P P P mRNA present 17 46 16 13 19 23 17 10 10 17 21 16 28 11 6 9 6 6 3 # of tryptic peptides predicted P P P P P P P P P P P P P P P P P P Protein detected - total list 14 14 10 12 2 2 4 6 6 9 5 4 5 4 2 5 8 2 0 # of tryptic peptides detected (total list) P P P P P P P P P P P P P P Protein detected - short list 16 12 10 2 1 5 6 8 8 5 7 5 5 0 9 1 4 5 0 # of tryptic peptides detected (short list) P P P P P P P P P P P P P P P P P Protein detected - long list 14 14 10 12 2 2 4 6 6 9 5 4 5 0 2 5 8 2 0 # of tryptic peptides detected (long list) P(m) Proteins detected - membrane sample

# of tryptic peptides 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 detected (membrane sample) GenProt Membrane protein assignment putative yhbHsigma 54modulator heat shockprotein putative formateacetyltransferase serine hydroxymethyltransferase nucleoside diphosphatekinase thiosulfate bindingprotein histidine tRNAsynthetase IMP dehydrogenase uracil phosphoribosyltransferase thiol peroxidase,thioredoxindependent cysteine synthaseB,O-acetylserinesulfhydrolaseB PTS system,glucose-specificIIAcomponent PEP-protein phosphotransferasesystemenzymeI tyrosine repressible) 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase(DAHPsynthetase, RNAse IIIlethalaction enhances synthesisofsigma32inmutant;extragenicsuppressor, maymodulate dihydrodipicolinate synthase synthetase phosphoribosylaminoimidazole-succinocarboxamide synthetase=SAICAR PTS systemproteinHPr lipoprotein-34

Gene description Miscellaneous Macromolecule metabolism Metabolism ofsmallmolecules Metabolism ofsmallmolecules Metabolism ofsmallmolecules Cell processes Macromolecule metabolism Metabolism ofsmallmolecules Metabolism ofsmallmolecules Cell processes Metabolism ofsmallmolecules Cell processes Cell processes Metabolism of small molecules Global functions Metabolism ofsmallmolecules Metabolism ofsmallmolecules Cell processes Macromolecule metabolism

Functional category b2925 b2914 b2898 b2699 b2890 b2838 b2803 b2780 b2779 b2742 b2733 b2729 b2727 b2697 b2687 b2679 b2665 b2614 b2608 B number fba rpiA ygfZ recA lysS lysA fucK pyrG eno nlpD mutS hypD hypB alaS ygaG proX ygaU grpE rimM Gene name 11093 41875 37205 5147 2279 1971 3341 1501 7990 6894 3559 6568 3443 2920 683 439 379 674 298 mRNA intensity P P P P P P P P P P P P P P P P P P P mRNA present 12 16 15 27 11 22 27 19 10 39 15 10 49 11 12 7 7 6 9 # of tryptic peptides predicted P P P P P P P P P P P P P P Protein detected - total list 14 14 15 13 3 6 6 2 0 7 0 0 0 0 3 7 3 2 1 # of tryptic peptides detected (total list) P P P P P P P P P Protein detected - short list 12 13 15 9 3 7 6 2 0 7 0 1 0 0 1 8 1 3 4 # of tryptic peptides detected (short list) P P P P P P P P P P P P P P Protein detected - long list 14 14 15 13 3 6 6 2 0 7 0 0 0 0 3 7 1 2 1 # of tryptic peptides detected (long list) P(m) P(m) P(m) P(m) Proteins detected - membrane sample

# of tryptic peptides 1 0 0 0 2 0 0 0 0 2 0 0 0 0 0 0 0 3 0 detected (membrane sample) GenProt Membrane protein assignment fructose-bisphosphate aldolase,classII ribosephosphate isomerase,constitutive orf, hypotheticalprotein lysine tRNAsynthetase,constitutive; suppressorofColE1mutationinprimerRNA alanyl-tRNA synthetase diaminopimelate decarboxylase L-fuculokinase CTP synthetase enolase methyl-directed mismatchrepair pleiotrophic effectson3hydrogenaseisozymes orf, hypotheticalprotein high-affinity transportsystemforglycinebetaineandproline phage lambdareplication;hostDNAsynthesis;heatshockprotein;proteinrepair lipoprotein hydrogenase 3 guanine-nucleotide bindingprotein,functionsasnickeldonorforlargesubunitof dependent coprotease DNA strandexchangeandrenaturation,DNA-dependentATPase,DNA-ATP- orf, hypotheticalprotein 16S rRNAprocessingprotein

Gene description Metabolism of small molecules Metabolism of small molecules Open readingframes Macromolecule metabolism Macromolecule metabolism Metabolism ofsmallmolecules Metabolism ofsmallmolecules Metabolism ofsmallmolecules Metabolism ofsmallmolecules Macromolecule metabolism Metabolism ofsmallmolecules Miscellaneous Cell processes Extrachromosomal Macromolecule metabolism Metabolism ofsmallmolecules Macromolecule metabolism Open readingframes Macromolecule metabolism

Functional category b3234 b3229 b3228 b3213 b3209 b3192 b3186 b3181 b3172 b3169 b3167 b3164 b3162 b3035 b3029 b2962 b2942 b2937 b2926 B number degQ sspA sspB gltD yhbL yrbC rplU greA argG nusA rbfA pnp deaD tolC ygiN yggX metK speB pgk Gene name 53296 11021 16984 4258 1618 7485 1071 3960 2077 1507 5346 3776 5845 2770 2768 1774 685 925 716 mRNA intensity P P P P P P P P P P P P P P P P P P P mRNA present 20 25 13 10 24 24 29 25 22 20 18

9 5 9 6 8 4 8 8 # of tryptic peptides predicted P P P P P P P P P P P P P P P P P P Protein detected - total list 11 10 19

2 2 1 1 1 3 4 6 7 3 8 2 1 3 8 0 # of tryptic peptides detected (total list) P P P P P P P P P Protein detected - short list 11 10 10 15

5 3 1 2 1 2 5 9 3 8 4 0 1 3 2 # of tryptic peptides detected (short list) P P P P P P P P P P P P P P P P P Protein detected - long list 11 19

2 2 1 1 1 3 4 6 7 3 8 2 0 1 3 8 0 # of tryptic peptides detected (long list) P(m) P(m) P(m) Proteins detected - membrane sample

# of tryptic peptides 10 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 detected (membrane sample) MP-GenProt

Membrane protein assignment serine endoprotease regulator oftranscription; stringentstarvation proteinA stringent starvationproteinB glutamate synthase,smallsubunit sigma cross-reactingprotein27A(SCRP-27A) orf, hypotheticalprotein 50S ribosomalsubunitproteinL21 transcription elongationfactor:cleaves3'nucleotideofpaused mRNA argininosuccinate synthetase transcription pausing;Lfactor ribosome-binding factorA inducible ATP-independentRNAhelicase orf, hypotheticalprotein orf, hypotheticalprotein phosphoglycerate kinase polynucleotide phosphorylase;cytidylatekinaseactivity chromosomes outer membranechannel;specifictolerancetocolicinE1;segregationofdaughter donor, corepressorofmetgenes methionine adenosyltransferase1(AdoMetsynthetase);methylandpropylamine

Gene description Macromolecule metabolism Global functions Global functions Metabolism ofsmallmolecules Miscellaneous Cell processes Structural elements Macromolecule metabolism Metabolism ofsmallmolecules Macromolecule metabolism Macromolecule metabolism Macromolecule metabolism Open readingframes Open readingframes Metabolism ofsmallmolecules Metabolism ofsmallmolecules Macromolecule metabolism Cell processes Metabolism ofsmallmolecules

Functional category b3460 b3458 b3433 b3426 b3423 b3421 b3414 b3390 b3385 b3363 b3359 b3347 b3340 b3339 b3295 b3288 b3255 b3253 b3236 B number livJ livK asd glpD glpR rtcB yhgI aroK gph ppiA argD fkpA fusA tufA rpoA fmt accB yhdH mdh Gene name 26232 56613 55718 33843 10847 18040 5530 7201 7847 1150 4562 5176 3910 2058 1967 1544 1413 1362 238 mRNA intensity A P P P P P P P P P P P P P P P P P P mRNA present 13 17 12 30 11 24 14 18 13 32 22 17 13 13 13 6 7 8 6 # of tryptic peptides predicted P P P P P P P P P P P P P P P P Protein detected - total list 11 11 12 23 29 36 12 25 1 0 3 2 0 1 3 6 4 0 3 # of tryptic peptides detected (total list) P P P P P P P P P P P P Protein detected - short list 11 20 16 14 10 12 6 7 1 0 3 3 1 2 4 8 4 1 5 # of tryptic peptides detected (short list) P P P P P P P P P P P P P P P P Protein detected - long list 11 11 12 23 29 36 12 25 1 0 3 2 0 1 3 6 4 0 3 # of tryptic peptides detected (long list) P(m) P(m) P(m) Proteins detected - membrane sample

# of tryptic peptides 12 1 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 detected (membrane sample)

Membrane protein assignment high-affinity amino acidtransportsystem;periplasmic bindingprotein high-affinity leucine-specific transportsystem; periplasmicbindingprotein aspartate-semialdehyde dehydrogenase sn-glycerol-3-phosphate dehydrogenase (aerobic) repressor oftheglpoperon Still Unknown orf, hypotheticalprotein shikimate kinaseI phosphoglycolate phosphatase peptidyl-prolyl cis-transisomeraseA(rotamaseA) acetylornithine delta-aminotransferase FKBP-type peptidyl-prolylcis-transisomerase(rotamase) GTP-binding proteinchainelongationfactorEF-G protein chainelongationfactorEF-Tu(duplicateoftufB) RNA polymerase,alphasubunit 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferase acetylCoA carboxylase,BCCPsubunit;carrierofbiotin putative dehydrogenase malate dehydrogenase

Gene description Cell processes Cell processes Metabolism ofsmallmolecules Metabolism ofsmallmolecules Metabolism ofsmallmolecules Open readingframes Miscellaneous Metabolism ofsmallmolecules Metabolism ofsmallmolecules Macromolecule metabolism Metabolism ofsmallmolecules Macromolecule metabolism Macromolecule metabolism Macromolecule metabolism Miscellaneous Macromolecule metabolism Metabolism ofsmallmolecules Miscellaneous Metabolism ofsmallmolecules

Functional category b3728 b3719 b3708 b3687 b3671 b3661 b3640 b3665 b3732 b3731 b3619 b3612 b3544 b3510 b3509 b3500 b3495 b3472 b3465 B number pstS yieL tnaA ibpA ilvB nlpA dut yicP atpD atpC rfaD yibO dppA hdeA hdeB gor uspA b3472 yhhF Gene name 13089 21552 21127 2111 1915 5136 1002 1867 5523 4613 4177 1790 3775 2280 2715 653 117 724 34 mRNA intensity A A P P P P P P P P P P P P P P P P P mRNA present 22 16 22 22 11 24 23 18 19 24 17 10 6 4 3 2 7 4 9 # of tryptic peptides predicted P P P P P P P P P P P P Protein detected - total list 11 12 15 0 0 8 1 5 3 1 0 0 4 2 1 3 0 0 0 # of tryptic peptides detected (total list) P P P P P P P Protein detected - short list 10 13 15 0 0 8 1 5 4 1 0 0 3 1 1 4 1 0 0 # of tryptic peptides detected (short list) P P P P P P P P P P P P Protein detected - long list 10 12 15 0 0 8 1 5 3 1 0 0 4 2 1 3 0 0 0 # of tryptic peptides detected (long list) P(m) P(m) P(m) Proteins detected - membrane sample

# of tryptic peptides 11 0 0 0 0 0 0 0 1 0 0 0 2 0 0 0 0 0 0 detected (membrane sample) MP-GenProt MP-GenProt GenProt Membrane protein assignment putative xylanase tryptophanase heat shockprotein acetolactate synthaseI,valine-sensitive,largesubunit deoxyuridinetriphosphatase probable adeninedeaminase(synthesisxanthine) ADP-L-glycero-D-mannoheptose-6-epimerase lipoprotein-28 putative 2,3-bisphosphoglycerate-independentphosphoglyceratemutase dipeptide transportprotein orf, hypotheticalprotein orf, hypotheticalprotein glutathione oxidoreductase universal stressprotein;broadregulatoryfunction? orf, hypotheticalprotein membrane-bound ATPsynthase,F1sector, beta-subunit membrane-bound ATPsynthase,F1sector, epsilon-subunit protein high-affinity phosphate-specific transportsystem;periplasmicphosphate-binding orf, hypotheticalprotein

Gene description Miscellaneous Metabolism ofsmallmolecules Cell processes Metabolism ofsmallmolecules Metabolism ofsmallmolecules Metabolism ofsmallmolecules Structural elements Macromolecule metabolism Miscellaneous Cell processes Open readingframes Open readingframes Metabolism ofsmallmolecules Cell processes Open readingframes Cell processes Cell processes Cell processes Open readingframes

Functional category b3931 b3926 b3919 b3917 b3916 b3908 b3870 b3863 b3860 b3847 b3831 b3781 b3736 b3734 b3774 b3771 b3770 b3751 b3744 B number hslU glpK tpiA sbp pfkA sodA glnA polA dsbA pepQ udp trxA atpF atpA ilvC ilvD ilvE rbsB asnA Gene name 17449 20896 28649 16689 21344 11090 1558 7653 2928 3685 2297 2496 1535 5763 1335 2177 394 827 412 mRNA intensity P P P P P P P P P P P P P P P P P P P mRNA present 26 28 10 19 18 20 42 10 20 10 10 25 28 25 13 13 13

8 8 # of tryptic peptides predicted P P P P P P P P P P P P P P P P P P Protein detected - total list 22 12 17 23 7 1 0 2 9 5 1 5 1 5 3 6 5 3 2 # of tryptic peptides detected (total list) P P P P P P P P P P P Protein detected - short list 19 12 14 16 9 3 0 1 6 7 2 5 3 4 1 6 3 4 2 # of tryptic peptides detected (short list) P P P P P P P P P P P P P P P P P P Protein detected - long list 22 12 15 23 7 1 0 2 9 5 1 5 1 5 1 6 5 3 2 # of tryptic peptides detected (long list) P(m) P(m) P(m) P(m) Proteins detected - membrane sample

# of tryptic peptides 17 0 3 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 3 detected (membrane sample) MP-GenProt MP-GenProt

Membrane protein assignment heat shockprotein hslVU,ATPasesubunit, homologous tochaperones glycerol kinase triosephosphate isomerase periplasmic sulfate-bindingprotein 6-phosphofructokinase I superoxide dismutase,manganese glutamine synthetase DNA polymeraseI,3'-->5'polymerase,and 5'exonuclease proline dipeptidase uridine phosphorylase thioredoxin 1 dependent reduction protein disulfideisomeraseI,essentialforcytochromecsynthesis andformate- ketol-acid reductoisomerase membrane-bound ATPsynthase,F1sector,alpha-subunit dihydroxyacid dehydratase branched-chain amino-acidaminotransferase D-ribose periplasmicbindingprotein asparagine synthetaseA membrane-bound ATPsynthase,F0sector,subunitb

Gene description Cell processes Metabolism of small molecules Metabolism ofsmallmolecules Cell processes Metabolism ofsmallmolecules Cell processes Metabolism ofsmallmolecules Macromolecule metabolism Macromolecule metabolism Metabolism ofsmallmolecules Metabolism ofsmallmolecules Macromolecule metabolism Metabolism ofsmallmolecules Cell processes Metabolism ofsmallmolecules Metabolism ofsmallmolecules Cell processes Metabolism ofsmallmolecules Cell processes

Functional category b4006 b4005 b3993 b3987 b3986 b3984 b3982 b4177 b4150 b4143 b4142 b4135 b4059 b4052 b4034 b4019 b4015 b3942 b3932 B number purH purD thiE rpoB rplL rplA nusG purA ampC mopA mopB yjdC ssb dnaB malE metH aceA katG hslV Gene name 23694 28105 10097 35460 30099 3168 1053 4076 8885 5933 2778 2805 2312 1658 3061 1355 2050 3959 295 mRNA intensity P P P P P P P P P P P P P P P P P P P mRNA present 28 17 63 12 10 21 19 26 12 28 24 58 20 34 9 5 6 7 6 # of tryptic peptides predicted P P P P P P P P P P P P P P P P P P Protein detected - total list 10 31 15 13 15 34 15 5 2 6 9 5 0 5 2 3 1 3 1 # of tryptic peptides detected (total list) P P P P P P P P P P P Protein detected - short list 13 31 10 15 17 13 14 14 5 3 4 3 0 4 2 3 2 3 1 # of tryptic peptides detected (short list) P P P P P P P P P P P P P P P P P P Protein detected - long list 10 31 15 13 15 34 15 5 2 6 9 5 0 5 2 3 1 3 1 # of tryptic peptides detected (long list) P(m) P(m) P(m) P(m) P(m) Proteins detected - membrane sample

# of tryptic peptides 0 0 0 0 0 0 0 1 3 0 0 4 0 0 0 0 7 1 0 detected (membrane sample)

Membrane protein assignment phosphoribosylglycinamide synthetase=GAR thiamin biosynthesis,thiazolemoiety RNA polymerase,betasubunit component intranscriptionantitermination adenylosuccinate synthetase 50S ribosomalsubunitproteinL7/L12 50S ribosomalsubunitproteinL1,regulatessynthesisofL1andL11 catalase; hydroperoxidaseHPI(I) beta-lactamase; penicillinresistance GroEL, chaperoneHsp60,peptide-dependent ATPase,heatshockprotein orf, hypotheticalprotein ssDNA-binding protein replicative DNAhelicase;partofprimosome isocitrate ATPase activity GroES, 10Kdchaperonebinds toHsp60inpres.Mg-ATP,suppressingits chemotaxis periplasmic maltose-bindingprotein;substraterecognition fortransportand repressor ofmetEandmetF B12-dependent homocysteine-N5-methyltetrahydrofolatetransmethylase, formyltransferase; IMPcyclohydrolase phosphoribosylaminoimidazolecarboxamideformyltransferase =AICAR heat shockproteinhslVU,proteasome-relatedpeptidasesubunit

Gene description Metabolism ofsmallmolecules Metabolism ofsmallmolecules Miscellaneous Macromolecule metabolism Metabolism of small molecules Structural elements Structural elements Cell processes Cell processes Cell processes Open readingframes Macromolecule metabolism Macromolecule metabolism Metabolism ofsmallmolecules Cell processes Cell processes Metabolism ofsmallmolecules Metabolism ofsmallmolecules Macromolecule metabolism

Functional category b4196 b4200 b4203 b4207 b4226 b4232 b4243 b4254 b4244 b4384 b4381 b4245 b4401 B number sgaH rpsF rplI fklB ppa fbp yjgF argI pyrI deoD deoC pyrB arcA Membrane protein assignment(see Corbinetal.2003): MP-list#1,GenProt -list#2,PHD#3. Annotation information accordingtoBlattneretal(1997).Functional categoriesareassignedasdefinedbyRiley andLabedan(1996). Swiss-2DPAGE database(http://us.expasy.org/ch2d/) wassearchedfor was matchedagainst the listof Gene name 23491 11796 36636 39294 2574 3787 3081 2607 2198 3617 2126 259 533 mRNA intensity A P P P P P P P P P P P P mRNA present 10 10 11 14 14 15 14 19 11 9 7 7 9 # of tryptic peptides predicted P P P P P P P P P P P P Protein detected - total list 14 0 2 5 4 4 3 2 3 4 8 4 2 # of tryptic peptides

E. coli detected (total list) P P P P P P Protein detected -

proteinsdetectedbyHPLC-MS/MS. short list 10 0 2 6 5 3 6 3 3 4 7 2 2 # of tryptic peptides detected (short list) P P P P P P P P P P P P Protein detected - long list 14 0 2 5 4 4 3 2 3 4 8 4 2 # of tryptic peptides detected (long list) P(m) P(m) Proteins detected - membrane sample

# of tryptic peptides 0 0 3 0 0 0 0 2 0 0 0 0 0 detected (membrane

E. coli sample)

Membrane protein proteins; 336proteins(asofAugust2004)werefound.Thislist assignment CpxA) negative responseregulatorofgenesinaerobicpathways, (sensors,ArcBand probable hexulose-6-phosphatesynthase 30S ribosomalsubunitproteinS6 50S ribosomalsubunitproteinL9 FKBP-type 22KDpeptidyl-prolylcis-transisomerase(rotamase) inorganic pyrophosphatase fructose-bisphosphatase orf, hypotheticalprotein aspartate carbamoyltransferase,catalyticsubunit 2-deoxyribose-5-phosphate aldolase ornithine carbamoyltransferase1 aspartate carbamoyltransferase,regulatorysubunit -nucleoside phosphorylase

Gene description Global functions Metabolism ofsmallmolecules Structural elements Structural elements Macromolecule metabolism Metabolism ofsmallmolecules Metabolism ofsmallmolecules Open readingframes Metabolism ofsmallmolecules Metabolism ofsmallmolecules Metabolism ofsmallmolecules Metabolism ofsmallmolecules Metabolism ofsmallmolecules

Functional category