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Elucidation of the Specificity of Sinorhizobium Meliloti Chemoreceptors
Elucidation of the Specificity of Sinorhizobium meliloti Chemoreceptors for Host Derived Attractants Benjamin Allen Webb Dissertation submitted to the faculty of the Virginia Polytechnic Institute and State University in partial fulfillment of the requirements for the degree of Doctor of Philosophy in Biological Sciences Birgit E. Scharf, Chair Richard F. Helm Florian D. Schubot Dorothea Tholl Mark A. Williams August 12th, 2016 Blacksburg, VA Keywords: alfalfa, chemotaxis, ligand, methyl accepting chemotaxis protein, symbiosis Copyright © 2016, Benjamin Allen Webb [Type here] Elucidation of the Specificity of S. meliloti Chemoreceptors for Host Derived Attractants Benjamin A. Webb ABSTRACT The bacterium Sinorhizobium (Ensifer) meliloti is a member of the Rhizobiaceae family and can enter a mutualistic, diazotrophic relationship with most plants of the genera Medicago, Melilotus, and Trigonella. Medicago sativa (alfalfa) is an agriculturally important legume that hosts S. meliloti and allows the bacterium to invade the plant root and begin fixing nitrogen. Prior to invasion, S. meliloti exists as a free living bacterium and must navigate through the soil to find alfalfa, using chemical signals secreted by the root. Alfalfa is the 4th most cultivated crop in the United States, therefore, identification of plant host signals that lure S. meliloti, and identification of the bacterium’s chemoreceptors that perceive the signals can aid in propagating the symbiosis more efficiently, thus leading to greater crop yields. Investigations here focus on discovering alfalfa derived attractant signals and matching them to their respective chemoreceptors in S. meliloti. We have determined the chemotactic potency of alfalfa seed exudate and characterized and quantified two classes of attractant compounds exuded by germinating alfalfa seeds, namely, amino acids and quaternary ammonium compounds (QACs). -
Atlas of the Flora of New England: Fabaceae
Angelo, R. and D.E. Boufford. 2013. Atlas of the flora of New England: Fabaceae. Phytoneuron 2013-2: 1–15 + map pages 1– 21. Published 9 January 2013. ISSN 2153 733X ATLAS OF THE FLORA OF NEW ENGLAND: FABACEAE RAY ANGELO1 and DAVID E. BOUFFORD2 Harvard University Herbaria 22 Divinity Avenue Cambridge, Massachusetts 02138-2020 [email protected] [email protected] ABSTRACT Dot maps are provided to depict the distribution at the county level of the taxa of Magnoliophyta: Fabaceae growing outside of cultivation in the six New England states of the northeastern United States. The maps treat 172 taxa (species, subspecies, varieties, and hybrids, but not forms) based primarily on specimens in the major herbaria of Maine, New Hampshire, Vermont, Massachusetts, Rhode Island, and Connecticut, with most data derived from the holdings of the New England Botanical Club Herbarium (NEBC). Brief synonymy (to account for names used in standard manuals and floras for the area and on herbarium specimens), habitat, chromosome information, and common names are also provided. KEY WORDS: flora, New England, atlas, distribution, Fabaceae This article is the eleventh in a series (Angelo & Boufford 1996, 1998, 2000, 2007, 2010, 2011a, 2011b, 2012a, 2012b, 2012c) that presents the distributions of the vascular flora of New England in the form of dot distribution maps at the county level (Figure 1). Seven more articles are planned. The atlas is posted on the internet at http://neatlas.org, where it will be updated as new information becomes available. This project encompasses all vascular plants (lycophytes, pteridophytes and spermatophytes) at the rank of species, subspecies, and variety growing independent of cultivation in the six New England states. -
Plant List for Web Page
Stanford Working Plant List 1/15/08 Common name Botanical name Family origin big-leaf maple Acer macrophyllum Aceraceae native box elder Acer negundo var. californicum Aceraceae native common water plantain Alisma plantago-aquatica Alismataceae native upright burhead Echinodorus berteroi Alismataceae native prostrate amaranth Amaranthus blitoides Amaranthaceae native California amaranth Amaranthus californicus Amaranthaceae native Powell's amaranth Amaranthus powellii Amaranthaceae native western poison oak Toxicodendron diversilobum Anacardiaceae native wood angelica Angelica tomentosa Apiaceae native wild celery Apiastrum angustifolium Apiaceae native cutleaf water parsnip Berula erecta Apiaceae native bowlesia Bowlesia incana Apiaceae native rattlesnake weed Daucus pusillus Apiaceae native Jepson's eryngo Eryngium aristulatum var. aristulatum Apiaceae native coyote thistle Eryngium vaseyi Apiaceae native cow parsnip Heracleum lanatum Apiaceae native floating marsh pennywort Hydrocotyle ranunculoides Apiaceae native caraway-leaved lomatium Lomatium caruifolium var. caruifolium Apiaceae native woolly-fruited lomatium Lomatium dasycarpum dasycarpum Apiaceae native large-fruited lomatium Lomatium macrocarpum Apiaceae native common lomatium Lomatium utriculatum Apiaceae native Pacific oenanthe Oenanthe sarmentosa Apiaceae native 1 Stanford Working Plant List 1/15/08 wood sweet cicely Osmorhiza berteroi Apiaceae native mountain sweet cicely Osmorhiza chilensis Apiaceae native Gairdner's yampah (List 4) Perideridia gairdneri gairdneri Apiaceae -
Fruits and Seeds of Genera in the Subfamily Faboideae (Fabaceae)
Fruits and Seeds of United States Department of Genera in the Subfamily Agriculture Agricultural Faboideae (Fabaceae) Research Service Technical Bulletin Number 1890 Volume I December 2003 United States Department of Agriculture Fruits and Seeds of Agricultural Research Genera in the Subfamily Service Technical Bulletin Faboideae (Fabaceae) Number 1890 Volume I Joseph H. Kirkbride, Jr., Charles R. Gunn, and Anna L. Weitzman Fruits of A, Centrolobium paraense E.L.R. Tulasne. B, Laburnum anagyroides F.K. Medikus. C, Adesmia boronoides J.D. Hooker. D, Hippocrepis comosa, C. Linnaeus. E, Campylotropis macrocarpa (A.A. von Bunge) A. Rehder. F, Mucuna urens (C. Linnaeus) F.K. Medikus. G, Phaseolus polystachios (C. Linnaeus) N.L. Britton, E.E. Stern, & F. Poggenburg. H, Medicago orbicularis (C. Linnaeus) B. Bartalini. I, Riedeliella graciliflora H.A.T. Harms. J, Medicago arabica (C. Linnaeus) W. Hudson. Kirkbride is a research botanist, U.S. Department of Agriculture, Agricultural Research Service, Systematic Botany and Mycology Laboratory, BARC West Room 304, Building 011A, Beltsville, MD, 20705-2350 (email = [email protected]). Gunn is a botanist (retired) from Brevard, NC (email = [email protected]). Weitzman is a botanist with the Smithsonian Institution, Department of Botany, Washington, DC. Abstract Kirkbride, Joseph H., Jr., Charles R. Gunn, and Anna L radicle junction, Crotalarieae, cuticle, Cytiseae, Weitzman. 2003. Fruits and seeds of genera in the subfamily Dalbergieae, Daleeae, dehiscence, DELTA, Desmodieae, Faboideae (Fabaceae). U. S. Department of Agriculture, Dipteryxeae, distribution, embryo, embryonic axis, en- Technical Bulletin No. 1890, 1,212 pp. docarp, endosperm, epicarp, epicotyl, Euchresteae, Fabeae, fracture line, follicle, funiculus, Galegeae, Genisteae, Technical identification of fruits and seeds of the economi- gynophore, halo, Hedysareae, hilar groove, hilar groove cally important legume plant family (Fabaceae or lips, hilum, Hypocalypteae, hypocotyl, indehiscent, Leguminosae) is often required of U.S. -
Wild and Cultivated Clovers of Ohio
WILD AND CULTIVATED CLOVERS OF OHIO. MARY B. LINNELL. FABACEAE—Bean Family. Sub-family—FABATAE. Tribe—Trif olieae—Clovers. Stamens diadelphus, anthers all alike. Leaves with three leaflets, rarely with one leaflet; leaflets denticulate. Synopsis of Genera. I. Corolla falling off after blossoming; petal claws free. 1. Flowers in heads or short racemes, seldom single; pod linear, curved or twisted. a. Pod linear, straight, or somewhat curved, often beaked. Trigonella. b. Pod mostly spirally twisted, sometimes curved, or kidney-shaped. Medicago. 2. Flowers in elongated racemes; pods thick, almost spherical or obovate. Melilotus. II. Corolla mostly drying up and persistent after flowering; petal claws either all or the four lower ones united with the stamen tube. Trifolium. Key. 1. Petals united with the stamen tube, persistent; flowers in globose or elongated heads, or umbellate. Trifolium, 1. Petals free from the stamen tube, falling off. 2. 2. Flowers small, yellow or white, drooping; inflorescence an elongated raceme. Melilotus. 2. Flowers single, in pairs, or in a dense more or less elongated inflorescence.3 3. Leaflets denticulate all around, seldom almost entire-margined; fruit linear, beaked, often somewhat curved. Trigonella. 3. Leaflets denticulate only at the outer end; fruit strongly curved or spirally twisted. Medicago. Trigonella L. Annual plants with yellow or blue flowers. Stipules united with the petiole at the base. Flowers linear, straight or curved. 1. Trigonella foenum-graecum L. Fenugreek. Annual fodder plants; flowers single or in pairs; pod linear, many seeded. Introduced from Asia and cultivated for its aromatic, mucilaginous seeds, formerly employed in medicines and still used by veterinarians. -
Appendix A. Plant Species Known to Occur at Canaveral National Seashore
National Park Service U.S. Department of the Interior Natural Resource Stewardship and Science Vegetation Community Monitoring at Canaveral National Seashore, 2009 Natural Resource Data Series NPS/SECN/NRDS—2012/256 ON THE COVER Pitted stripeseed (Piriqueta cistoides ssp. caroliniana) Photograph by Sarah L. Corbett. Vegetation Community Monitoring at Canaveral National Seashore, 2009 Natural Resource Report NPS/SECN/NRDS—2012/256 Michael W. Byrne and Sarah L. Corbett USDI National Park Service Southeast Coast Inventory and Monitoring Network Cumberland Island National Seashore 101 Wheeler Street Saint Marys, Georgia, 31558 and Joseph C. DeVivo USDI National Park Service Southeast Coast Inventory and Monitoring Network University of Georgia 160 Phoenix Road, Phillips Lab Athens, Georgia, 30605 March 2012 U.S. Department of the Interior National Park Service Natural Resource Stewardship and Science Fort Collins, Colorado The National Park Service, Natural Resource Stewardship and Science office in Fort Collins, Colorado publishes a range of reports that address natural resource topics of interest and applicability to a broad audience in the National Park Service and others in natural resource management, including scientists, conservation and environmental constituencies, and the public. The Natural Resource Data Series is intended for the timely release of basic data sets and data summaries. Care has been taken to assure accuracy of raw data values, but a thorough analysis and interpretation of the data has not been completed. Consequently, the initial analyses of data in this report are provisional and subject to change. All manuscripts in the series receive the appropriate level of peer review to ensure that the information is scientifically credible, technically accurate, appropriately written for the intended audience, and designed and published in a professional manner. -
Norfolk Island Quarantine Survey 2012-2014 – a Comprehensive Assessment of an Isolated Subtropical Island
Norfolk Island Quarantine Survey 2012-2014 – a Comprehensive Assessment of an Isolated Subtropical Island G.V.MAYNARD1, B.J.LEPSCHI2 AND S.F.MALFROY1 1Department of Agriculture and Water Resources, GPO Box 858, Canberra ACT 2601, Australia; and 2Australian National Herbarium, Centre for Australian National Biodiversity Research, GPO Box 1700, Canberra, ACT 2601, Australia Published on 10 March 2018 at https://openjournals.library.sydney.edu.au/index.php/LIN/index Maynard, G.V., Lepschi, B.J. and Malfroy, S.F. (2018). Norfolk Island quarantine survey 2012-2014 – a comprehensive assessment of an isolated subtropical island. Proceedings of the Linnean Society of New South Wales 140, 7-243 A survey of Norfolk Island, Australia was carried out during 2012-2014 to develop a baseline of information on plant pests, and diseases and parasites of domestic animals for biosecurity purposes. The Norfolk Island Quarantine Survey covered introduced vascular plants, invertebrate pests of plants and animals; plant pathogens; pests and diseases of bees, and diseases and parasites of domestic animals. 1747 species were recorded across all organism groups during the course of the survey, of which 658 are newly recorded for Norfolk Island. Details of all organisms recorded during the survey are presented, along with a bibliography of plants and animals of Norfolk Island, with particular reference to introduced taxa. Manuscript received 25 July 2017, accepted for publication 30 January 2018. KEYWORDS: animal diseases, bees, invertebrates, Norfolk Island, plant biosecurity, plant pathogens, plant pests, quarantine survey. INTRODUCTION uninhabited islands - Nepean Island, 1 km to the south, and Philip Island 6 km to the south (Fig. -
Departamento De Biología Vegetal, Escuela Técnica Superior De
CRECIMIENTO FORESTAL EN EL BOSQUE TROPICAL DE MONTAÑA: EFECTOS DE LA DIVERSIDAD FLORÍSTICA Y DE LA MANIPULACIÓN DE NUTRIENTES. Tesis Doctoral Nixon Leonardo Cumbicus Torres 2015 UNIVERSIDAD POLITÉCNICA DE MADRID ESCUELA E.T.S. I. AGRONÓMICA, AGROALIMENTARIA Y DE BIOSISTEMAS DEPARTAMENTO DE BIOTECNOLOGÍA-BIOLOGÍA VEGETAL TESIS DOCTORAL CRECIMIENTO FORESTAL EN EL BOSQUE TROPICAL DE MONTAÑA: EFECTOS DE LA DIVERSIDAD FLORÍSTICA Y DE LA MANIPULACIÓN DE NUTRIENTES. Autor: Nixon Leonardo Cumbicus Torres1 Directores: Dr. Marcelino de la Cruz Rot2, Dr. Jürgen Homeir3 1Departamento de Ciencias Naturales. Universidad Técnica Particular de Loja. 2Área de Biodiversidad y Conservación. Departamento de Biología y Geología, ESCET, Universidad Rey Juan Carlos. 3Ecologia de Plantas. Albrecht von Haller. Instituto de ciencias de Plantas. Georg August University de Göttingen. Madrid, 2015. I Marcelino de la Cruz Rot, Profesor Titular de Área de Biodiversidad y Conservación. Departamento de Biología y Geología, ESCET, Universidad Rey Juan Carlos y Jürgen Homeir, Profesor de Ecologia de Plantas. Albrecht von Haller. Instituto de ciencias de las Plantas. Georg August Universidad de Göttingen CERTIFICAN: Que los trabajos de investigación desarrollados en la memoria de tesis doctoral: “Crecimiento forestal en el bosque tropical de montaña: Efectos de la diversidad florística y de la manipulación de nutrientes.”, han sido realizados bajo su dirección y autorizan que sea presentada para su defensa por Nixon Leonardo Cumbicus Torres ante el Tribunal que en su día se consigne, para aspirar al Grado de Doctor por la Universidad Politécnica de Madrid. VºBº Director Tesis VºBº Director de Tesis Dr. Marcelino de la Cruz Rot Dr. Jürgen Homeir II III Tribunal nombrado por el Mgfco. -
Analysis of Its Relationships with Grazing, Land Management, and Pastoral Value
Article Plant Diversity in Sardinian Mountain Rangelands: Analysis of Its Relationships with Grazing, Land Management, and Pastoral Value Vanessa Lozano 1, Gabriella Vacca 1, Ignazio Camarda 1, Giuseppe Brundu 1,*, Federico Sanna 2, Salvatore Caredda 1 and Giovanni Antonio Re 2 1 Department of Agricultural Sciences, University of Sassari, Viale Italia 39, 07100, Sassari, Italy; [email protected] (V.L.); [email protected] (G.V.); [email protected] (I.C.); [email protected] (S.C.). 2 CNR (Italian National Research Centre), ISPAAM, Institute for Animal Production System in Mediterranean Environment, Via La Crucca 3, località Baldinca, 07100, Sassari, Italy; [email protected] (F.S.); [email protected] (G.A.R.) * Correspondence: [email protected]; Tel.: +39-079-22-9395 Table 1. The main iso-bioclimatic types, found in the 63 plots of the study area, extracted from the bioclimate map of Sardinia. The code defines the categories in the original vector map of the bio- climates in Sardinia (Italy) [1]. Code Iso-bioclimatic type 10 Upper Thermomediterranean, Upper Dry, Euoceanic Weak Citation: Lozano, V.; Vacca, G.; 20 Lower Mesomediterranean, Lower Subhumid, Euoceanic Weak Camarda, I.; Brundu, G.; Sanna, F.; Caredda, S.; Re, G.A. Plant Diversity 28 Upper Mesomediterranean, Upper Subhumid, Euoceanic Weak in Sardinian Mountain Rangelands: 30 Upper Mesomediterranean, Lower Humid, Euoceanic Weak Analysis of Its Relationships with Grazing, Land Management, and 31 Upper Mesomediterranean, Lower Humid, Semicontinental Weak Pastoral Value. Ecologies 2021, 2, 9. 35 Lower Supramediterranean, Lower Humid, Semicontinental Weak https://doi.org/10.3390/ 37 Upper Mesotemperate (Submediterranean), Lower Humid, Semicontinental Weak ecologies2010009 38 Lower Supratemperate (Submediterranean), Lower Humid, Semicontinental Weak Received: 11 January 2021 Accepted: 22 February 2021 Published: 4 March 2021 Publisher’s Note: MDPI stays neu- tral with regard to jurisdictional claims in published maps and institu- tional affiliations. -
Fabaceae – Pea Or Bean Family
FABACEAE – PEA OR BEAN FAMILY Plant: herbs, less often vines, shrubs and trees, some with spines Stem: Root: Leaves: alternate, usually compound (rarely simple) – most often pinnately but sometimes palmately (or 3’s) divided, toothed or not; stipules present, sometimes becoming spines; swelling (pulvinus) often at base Flowers: mostly perfect; irregular (zygomorphic) ‘pea-like’ flowers often in dense heads, sometimes regular (actinomorphic); 4-5 sepals, often tube-like; 5 (rarely 1 or none) petals – often the 2 lower ones join to form the keel, the 2 to the side the wings, and the upper one is termed the banner or standard and external to the others and usually larger; 5-10 to many stamens, often fused; ovary mostly superior,1 pistil, 1 carpel, 2 to numerous ovules Fruit: legume; a dry pod, 1-chambered, opening along 2 seams or sutures Other: very large family; common foodstuffs such as peas, soybeans, beans, lentils, and peanuts; as well as hay – clover and alfalfa; some are poisonous; many are ornamentals. Dicotyledons Group (older name is Leguminosae) Genera: 725+ genera; locally, too many genera to list (divided into 3 subfamilies) WARNING – family descriptions are only a layman’s guide and should not be used as definitive Flower Morphology in the General Plan (many exceptions) – 5 petals (upper banner Fabaceae (Pea or Bean Family) or standard petal, 2 wing petals (often fused), and 2 keel petals (often fused) – Papilionaceous or Pea type flower) Examples of some common genera (L-Z) Everlasting [Perennial] Pea Sundial [Wild] Lupine Nuttall's Sensitive-Briar American [Northern] Wild Senna Lathyrus latifolius L. -
A New Subfamily Classification of The
LPWG Phylogeny and classification of the Leguminosae TAXON 66 (1) • February 2017: 44–77 A new subfamily classification of the Leguminosae based on a taxonomically comprehensive phylogeny The Legume Phylogeny Working Group (LPWG) Recommended citation: LPWG (2017) This paper is a product of the Legume Phylogeny Working Group, who discussed, debated and agreed on the classification of the Leguminosae presented here, and are listed in alphabetical order. The text, keys and descriptions were written and compiled by a subset of authors indicated by §. Newly generated matK sequences were provided by a subset of authors indicated by *. All listed authors commented on and approved the final manuscript. Nasim Azani,1 Marielle Babineau,2* C. Donovan Bailey,3* Hannah Banks,4 Ariane R. Barbosa,5* Rafael Barbosa Pinto,6* James S. Boatwright,7* Leonardo M. Borges,8* Gillian K. Brown,9* Anne Bruneau,2§* Elisa Candido,6* Domingos Cardoso,10§* Kuo-Fang Chung,11* Ruth P. Clark,4 Adilva de S. Conceição,12* Michael Crisp,13* Paloma Cubas,14* Alfonso Delgado-Salinas,15 Kyle G. Dexter,16* Jeff J. Doyle,17 Jérôme Duminil,18* Ashley N. Egan,19* Manuel de la Estrella,4§* Marcus J. Falcão,20 Dmitry A. Filatov,21* Ana Paula Fortuna-Perez,22* Renée H. Fortunato,23 Edeline Gagnon,2* Peter Gasson,4 Juliana Gastaldello Rando,24* Ana Maria Goulart de Azevedo Tozzi,6 Bee Gunn,13* David Harris,25 Elspeth Haston,25 Julie A. Hawkins,26* Patrick S. Herendeen,27§ Colin E. Hughes,28§* João R.V. Iganci,29* Firouzeh Javadi,30* Sheku Alfred Kanu,31 Shahrokh Kazempour-Osaloo,32* Geoffrey C. -
An Introduction to Blackheath's Clovers and Allies
An Introduction to Blackheath’s Clovers and Allies A project by Joe Beale, created in association with The Natural History Museum’s Identification Trainers for the Future programme, June 2017 About Blackheath’s Clovers Blackheath is home to a wide range of interesting and beautiful flowering plants. While the flowers seeded in the bunds at the Heath’s perimeter may first catch the eye, it is the wild flowers that still survive across the open Heath, with their subtle beauty, that are the real stars! Many of Blackheath’s interesting flowers belong to the Clover family: the Fabaceae. Here is a selection of some Knotted Clover (L) and Clustered Clover (R) of the key species you may see flowering in spring-sum- mer. The management is still somewhat trial and The rarer species were rediscovered by Juliet error, however, and the increasing pressures on the Heath Cairns a few years ago, having previously been thought from entertainment events or amenity use mean we must lost after Blackheath’s grasslands were levelled and be very careful to make sure we maintain our unusual “improved”. Further studies found more patches of these flora and the acid grassland habitat that supports it. apparently lost clovers that botanists used to visit from Some species are easier to find than others and it far and wide to see. Parts of the Heath are currently being may take a little practise to “get your eye in”. The best managed for biodiversity by the two councils, with input way, perhaps, is to bring a picnic and a camera and take from local conservationists.