The Genus Medicago (Fabaceae) in Alabama
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Steele Quark
Steele, K.P. and Wojciechowski, M.F. (2003). Phylogenetic analyses of tribes Trifolieae and Vicieae, based on sequences of the plastid gene, matK (Papilionoideae: Leguminosae). In: B.B. Klitgaard and A. Bruneau (editors). Advances in Legume Systematics, part 10, Higher Level Systematics, pp. 355–370. Royal Botanic Gardens, Kew. PHYLOGENETIC ANALYSES OF TRIBES TRIFOLIEAE AND VICIEAE, BASED ON SEQUENCES OF THE PLASTID GENE matK (PAPILIONOIDEAE: LEGUMINOSAE) KELLY P. STEELE1* AND MARTIN F. WOJCIECHOWSKI2 1 Department of Applied Biological Sciences, Arizona State University East, Mesa, AZ85212, USA 2 Department of Plant Biology, Arizona State University, Tempe, AZ85287, USA Abstract Tribes Trifolieae and Vicieae along with Cicereae and Galega (Galegeae) form a monophyletic group that has been designated informally as the “vicioid clade”. There is good support from analyses of various molecular data for the clade itself, but relationships of genera within the clade are not fully understood nor has monophyly of the tribes and genera been fully tested. Sequences of the plastid gene matK from 84 members of the vicioid clade were analysed using maximum parsimony. Results presented here provide strong support for a monophyletic Vicieae that includes Vicia, Lathyrus, Pisum and Lens. Vicia is paraphyletic with regard to other genera of Vicieae, but there is support for monophyletic groups of species of Vicia. Pisum is sister to a monophyletic Lathyrus, and Lens is sister to a small group of species of Vicia. A monophyletic Trifolium is sister to the Vicieae, and together they form a moderately supported monophyletic group. Similarly, a monophyletic Ononis is sister to genera of tribe Trifolieae including Medicago, Trigonella and Melilotus. -
Elucidation of the Specificity of Sinorhizobium Meliloti Chemoreceptors
Elucidation of the Specificity of Sinorhizobium meliloti Chemoreceptors for Host Derived Attractants Benjamin Allen Webb Dissertation submitted to the faculty of the Virginia Polytechnic Institute and State University in partial fulfillment of the requirements for the degree of Doctor of Philosophy in Biological Sciences Birgit E. Scharf, Chair Richard F. Helm Florian D. Schubot Dorothea Tholl Mark A. Williams August 12th, 2016 Blacksburg, VA Keywords: alfalfa, chemotaxis, ligand, methyl accepting chemotaxis protein, symbiosis Copyright © 2016, Benjamin Allen Webb [Type here] Elucidation of the Specificity of S. meliloti Chemoreceptors for Host Derived Attractants Benjamin A. Webb ABSTRACT The bacterium Sinorhizobium (Ensifer) meliloti is a member of the Rhizobiaceae family and can enter a mutualistic, diazotrophic relationship with most plants of the genera Medicago, Melilotus, and Trigonella. Medicago sativa (alfalfa) is an agriculturally important legume that hosts S. meliloti and allows the bacterium to invade the plant root and begin fixing nitrogen. Prior to invasion, S. meliloti exists as a free living bacterium and must navigate through the soil to find alfalfa, using chemical signals secreted by the root. Alfalfa is the 4th most cultivated crop in the United States, therefore, identification of plant host signals that lure S. meliloti, and identification of the bacterium’s chemoreceptors that perceive the signals can aid in propagating the symbiosis more efficiently, thus leading to greater crop yields. Investigations here focus on discovering alfalfa derived attractant signals and matching them to their respective chemoreceptors in S. meliloti. We have determined the chemotactic potency of alfalfa seed exudate and characterized and quantified two classes of attractant compounds exuded by germinating alfalfa seeds, namely, amino acids and quaternary ammonium compounds (QACs). -
Transcriptional Regulation of Genes Involved in Zinc Uptake, Sequestration and Redistribution Following Foliar Zinc Application to Medicago Sativa
Supplementary Material Transcriptional Regulation of Genes Involved in Zinc Uptake, Sequestration and Redistribution Following Foliar Zinc Application to Medicago sativa Alessio Cardini 1,†, Elisa Pellegrino 1,†,*, Philip J. White 2, Barbara Mazzolai 3, Marco C. Mascherpa 4, and Laura Ercoli 1 1 Institute of Life Sciences, Scuola Superiore Sant’Anna, Pisa, Italy; [email protected] (A.C.); [email protected] (E.P.); [email protected] (L.E.) 2 Department of Ecological Science, The James Hutton Institute, Invergowrie, Dundee, United Kingdom 3 Center for Micro-BioRobotics, Istituto Italiano di Tecnologia, Pontedera, Pisa, Italy; [email protected] 4 Istituto di Chimica dei Composti Organo Metallici, National Research Council (CNR), Pisa, Italy; [email protected] † These authors contributed equally to this work * Correspondence: [email protected] (E.P.) Plants 2021, 10, 476. https://doi.org/10.3390/plants10030476 www.mdpi.com/journal/plants Plants 2021, 10, 476 2 of 14 Supplementary Table Table S1. Fresh and dry weight of shoots and roots of alfalfa (Medicago sativa) 5 days after the application of Zn doses of 0, 0.01, 0.1, 0.5, 1, or 10 mg Zn plant−1 to leaves. Means ± standard error of three replicates are shown. Dose of Zn Application Shoot Fresh Weight Root Fresh Weight Shoot Dry Weight Root Dry Weight (mg plant−1) _________________________________________________ g plant−1 ________________________________________ 0 4.28 ± 0.12 1.96 ± 0.46 0.75 ± 0.01 0.19 ± 0.01 0.01 3.85 ± 0.46 2.40 ± 0.06 0.63 ± 0.06 0.19 ± 0.01 0.1 4.73 ± 0.80 2.24 ± 0.16 0.84 ± 0.11 0.29 ± 0.04 0.5 4.27 ± 0.98 2.39 ± 0.24 0.78 ± 0.17 0.26 ± 0.03 1 4.07 ± 0.33 1.75 ± 0.19 0.78 ± 0.06 0.26 ± 0.01 10 4.29 ± 0.85 1.76 ± 0.10 0.82 ± 0.14 0.23 ± 0.05 Plants 2021, 10, 476 3 of 14 Supplementary Figures Plants 2021, 10, 476 4 of 14 Figure S1. -
Review with Checklist of Fabaceae in the Herbarium of Iraq Natural History Museum
Review with checklist of Fabaceae in the herbarium of Iraq natural history museum Khansaa Rasheed Al-Joboury * Iraq Natural History Research Center and Museum, University of Baghdad, Baghdad, Iraq. GSC Biological and Pharmaceutical Sciences, 2021, 14(03), 137–142 Publication history: Received on 08 February 2021; revised on 10 March 2021; accepted on 12 March 2021 Article DOI: https://doi.org/10.30574/gscbps.2021.14.3.0074 Abstract This study aimed to make an inventory of leguminous plants for the purpose of identifying the plants that were collected over long periods and stored in the herbarium of Iraq Natural History Museum. It was found that the herbarium contains a large and varied number of plants from different parts of Iraq and in different and varied environments. It was collected and arranged according to a specific system in the herbarium to remain an important source for all graduate students and researchers to take advantage of these plants. Also, the flowering and fruiting periods of these plants in Iraq were recorded for different regions. Most of these plants begin to flower in the spring and thrive in fields and farms. Keywords: Fabaceae; Herbarium; Iraq; Natural; History; Museum 1. Introduction Leguminosae, Fabaceae or Papilionaceae, which was called as legume, pea, or bean Family, belong to the Order of Fabales [1]. The Fabaceae family have 727 genera also 19,325 species, which contents herbs, shrubs, trees, and climbers [2]. The distribution of fabaceae family was variety especially in cold mountainous regions for Europe, Asia and North America, It is also abundant in Central Asia and is characterized by great economic importance. -
The Synopsis of the Genus Trigonella L. (Fabaceae) in Turkey
Turkish Journal of Botany Turk J Bot (2020) 44: 670-693 http://journals.tubitak.gov.tr/botany/ © TÜBİTAK Research Article doi:10.3906/bot-2004-63 The synopsis of the genus Trigonella L. (Fabaceae) in Turkey 1, 2 2 Hasan AKAN *, Murat EKİCİ , Zeki AYTAÇ 1 Biology Department, Faculty of Art and Science, Harran University, Şanlıurfa, Turkey 2 Biology Department, Faculty of Science, Gazi University, Ankara, Turkey Received: 25.04.2020 Accepted/Published Online: 23.11.2020 Final Version: 30.11.2020 Abstract: In this study, the synopsis of the taxa of the genus Trigonella in Turkey is presented. It is represented with 34 taxa in Turkey. The name of Trigonella coelesyriaca was misspelled to Flora of Turkey and the correct name of this species, Trigonella caelesyriaca, was given in this study. The endemic Trigonella raphanina has been reduced to synonym of T. cassia and T. balansae is reduced to synonym of T. corniculata. In addition, T. spruneriana var. sibthorpii is reevaluated as a distinct species. Lectotypification was designated forT. capitata, T. spruneriana and T. velutina. Neotypification was decided for T. cylindracea and T. cretica species. Trigonella taxa used to be represented by 52 taxa in the Flora of Turkey. However, they have later been evaluated by different studies under 32 species (34 taxa) in Turkey. In this study, taxonomic notes, diagnostic keys are provided and general distribution as well as their conservation status of each species within the genus in Turkey is given. Key words: Anatolia, lectotype, Leguminosae, neotype, systematic 1. Introduction graecum L. (Fenugreek) were known and used for different The genus Trigonella L. -
Atlas of the Flora of New England: Fabaceae
Angelo, R. and D.E. Boufford. 2013. Atlas of the flora of New England: Fabaceae. Phytoneuron 2013-2: 1–15 + map pages 1– 21. Published 9 January 2013. ISSN 2153 733X ATLAS OF THE FLORA OF NEW ENGLAND: FABACEAE RAY ANGELO1 and DAVID E. BOUFFORD2 Harvard University Herbaria 22 Divinity Avenue Cambridge, Massachusetts 02138-2020 [email protected] [email protected] ABSTRACT Dot maps are provided to depict the distribution at the county level of the taxa of Magnoliophyta: Fabaceae growing outside of cultivation in the six New England states of the northeastern United States. The maps treat 172 taxa (species, subspecies, varieties, and hybrids, but not forms) based primarily on specimens in the major herbaria of Maine, New Hampshire, Vermont, Massachusetts, Rhode Island, and Connecticut, with most data derived from the holdings of the New England Botanical Club Herbarium (NEBC). Brief synonymy (to account for names used in standard manuals and floras for the area and on herbarium specimens), habitat, chromosome information, and common names are also provided. KEY WORDS: flora, New England, atlas, distribution, Fabaceae This article is the eleventh in a series (Angelo & Boufford 1996, 1998, 2000, 2007, 2010, 2011a, 2011b, 2012a, 2012b, 2012c) that presents the distributions of the vascular flora of New England in the form of dot distribution maps at the county level (Figure 1). Seven more articles are planned. The atlas is posted on the internet at http://neatlas.org, where it will be updated as new information becomes available. This project encompasses all vascular plants (lycophytes, pteridophytes and spermatophytes) at the rank of species, subspecies, and variety growing independent of cultivation in the six New England states. -
Identification of Drought-Responsive Micrornas in Medicago Truncatula
Wang et al. BMC Genomics 2011, 12:367 http://www.biomedcentral.com/1471-2164/12/367 RESEARCH ARTICLE Open Access Identification of drought-responsive microRNAs in Medicago truncatula by genome-wide high- throughput sequencing Tianzuo Wang1,2, Lei Chen1,2, Mingui Zhao1, Qiuying Tian1 and Wen-Hao Zhang1* Abstract Background: MicroRNAs (miRNAs) are small, endogenous RNAs that play important regulatory roles in development and stress response in plants by negatively affecting gene expression post-transcriptionally. Identification of miRNAs at the global genome-level by high-throughout sequencing is essential to functionally characterize miRNAs in plants. Drought is one of the common environmental stresses limiting plant growth and development. To understand the role of miRNAs in response of plants to drought stress, drought-responsive miRNAs were identified by high-throughput sequencing in a legume model plant, Medicago truncatula. Results: Two hundreds eighty three and 293 known miRNAs were identified from the control and drought stress libraries, respectively. In addition, 238 potential candidate miRNAs were identified, and among them 14 new miRNAs and 15 new members of known miRNA families whose complementary miRNA*s were also detected. Both high-throughput sequencing and RT-qPCR confirmed that 22 members of 4 miRNA families were up-regulated and 10 members of 6 miRNA families were down-regulated in response to drought stress. Among the 29 new miRNAs/ new members of known miRNA families, 8 miRNAs were responsive to drought stress with both 4 miRNAs being up- and down-regulated, respectively. The known and predicted targets of the drought-responsive miRNAs were found to be involved in diverse cellular processes in plants, including development, transcription, protein degradation, detoxification, nutrient status and cross adaptation. -
The Biology of Trifolium Repens L. (White Clover)
The Biology of Trifolium repens L. (White Clover) Photo: Mary-Anne Lattimore, NSW Agriculture, Yanco Version 2: October 2008 This document provides an overview of baseline biological information relevant to risk assessment of genetically modified forms of the species that may be released into the Australian environment. For information on the Australian Government Office of the Gene Technology Regulator visit <http://www.ogtr.gov.au> The Biology of Trifolium repens L. (white clover) Office of the Gene Technology Regulator TABLE OF CONTENTS PREAMBLE ...........................................................................................................................................1 SECTION 1 TAXONOMY .............................................................................................................1 SECTION 2 ORIGIN AND CULTIVATION ...............................................................................3 2.1 CENTRE OF DIVERSITY AND DOMESTICATION .................................................................................. 3 2.2 COMMERCIAL USES ......................................................................................................................... 3 2.3 CULTIVATION IN AUSTRALIA .......................................................................................................... 4 2.3.1 Commercial propagation ..................................................................................................5 2.3.2 Scale of cultivation ...........................................................................................................5 -
Plant List for Web Page
Stanford Working Plant List 1/15/08 Common name Botanical name Family origin big-leaf maple Acer macrophyllum Aceraceae native box elder Acer negundo var. californicum Aceraceae native common water plantain Alisma plantago-aquatica Alismataceae native upright burhead Echinodorus berteroi Alismataceae native prostrate amaranth Amaranthus blitoides Amaranthaceae native California amaranth Amaranthus californicus Amaranthaceae native Powell's amaranth Amaranthus powellii Amaranthaceae native western poison oak Toxicodendron diversilobum Anacardiaceae native wood angelica Angelica tomentosa Apiaceae native wild celery Apiastrum angustifolium Apiaceae native cutleaf water parsnip Berula erecta Apiaceae native bowlesia Bowlesia incana Apiaceae native rattlesnake weed Daucus pusillus Apiaceae native Jepson's eryngo Eryngium aristulatum var. aristulatum Apiaceae native coyote thistle Eryngium vaseyi Apiaceae native cow parsnip Heracleum lanatum Apiaceae native floating marsh pennywort Hydrocotyle ranunculoides Apiaceae native caraway-leaved lomatium Lomatium caruifolium var. caruifolium Apiaceae native woolly-fruited lomatium Lomatium dasycarpum dasycarpum Apiaceae native large-fruited lomatium Lomatium macrocarpum Apiaceae native common lomatium Lomatium utriculatum Apiaceae native Pacific oenanthe Oenanthe sarmentosa Apiaceae native 1 Stanford Working Plant List 1/15/08 wood sweet cicely Osmorhiza berteroi Apiaceae native mountain sweet cicely Osmorhiza chilensis Apiaceae native Gairdner's yampah (List 4) Perideridia gairdneri gairdneri Apiaceae -
Specificity in Legume-Rhizobia Symbioses
International Journal of Molecular Sciences Review Specificity in Legume-Rhizobia Symbioses Mitchell Andrews * and Morag E. Andrews Faculty of Agriculture and Life Sciences, Lincoln University, PO Box 84, Lincoln 7647, New Zealand; [email protected] * Correspondence: [email protected]; Tel.: +64-3-423-0692 Academic Editors: Peter M. Gresshoff and Brett Ferguson Received: 12 February 2017; Accepted: 21 March 2017; Published: 26 March 2017 Abstract: Most species in the Leguminosae (legume family) can fix atmospheric nitrogen (N2) via symbiotic bacteria (rhizobia) in root nodules. Here, the literature on legume-rhizobia symbioses in field soils was reviewed and genotypically characterised rhizobia related to the taxonomy of the legumes from which they were isolated. The Leguminosae was divided into three sub-families, the Caesalpinioideae, Mimosoideae and Papilionoideae. Bradyrhizobium spp. were the exclusive rhizobial symbionts of species in the Caesalpinioideae, but data are limited. Generally, a range of rhizobia genera nodulated legume species across the two Mimosoideae tribes Ingeae and Mimoseae, but Mimosa spp. show specificity towards Burkholderia in central and southern Brazil, Rhizobium/Ensifer in central Mexico and Cupriavidus in southern Uruguay. These specific symbioses are likely to be at least in part related to the relative occurrence of the potential symbionts in soils of the different regions. Generally, Papilionoideae species were promiscuous in relation to rhizobial symbionts, but specificity for rhizobial genus appears to hold at the tribe level for the Fabeae (Rhizobium), the genus level for Cytisus (Bradyrhizobium), Lupinus (Bradyrhizobium) and the New Zealand native Sophora spp. (Mesorhizobium) and species level for Cicer arietinum (Mesorhizobium), Listia bainesii (Methylobacterium) and Listia angolensis (Microvirga). -
Fort Ord Natural Reserve Plant List
UCSC Fort Ord Natural Reserve Plants Below is the most recently updated plant list for UCSC Fort Ord Natural Reserve. * non-native taxon ? presence in question Listed Species Information: CNPS Listed - as designated by the California Rare Plant Ranks (formerly known as CNPS Lists). More information at http://www.cnps.org/cnps/rareplants/ranking.php Cal IPC Listed - an inventory that categorizes exotic and invasive plants as High, Moderate, or Limited, reflecting the level of each species' negative ecological impact in California. More information at http://www.cal-ipc.org More information about Federal and State threatened and endangered species listings can be found at https://www.fws.gov/endangered/ (US) and http://www.dfg.ca.gov/wildlife/nongame/ t_e_spp/ (CA). FAMILY NAME SCIENTIFIC NAME COMMON NAME LISTED Ferns AZOLLACEAE - Mosquito Fern American water fern, mosquito fern, Family Azolla filiculoides ? Mosquito fern, Pacific mosquitofern DENNSTAEDTIACEAE - Bracken Hairy brackenfern, Western bracken Family Pteridium aquilinum var. pubescens fern DRYOPTERIDACEAE - Shield or California wood fern, Coastal wood wood fern family Dryopteris arguta fern, Shield fern Common horsetail rush, Common horsetail, field horsetail, Field EQUISETACEAE - Horsetail Family Equisetum arvense horsetail Equisetum telmateia ssp. braunii Giant horse tail, Giant horsetail Pentagramma triangularis ssp. PTERIDACEAE - Brake Family triangularis Gold back fern Gymnosperms CUPRESSACEAE - Cypress Family Hesperocyparis macrocarpa Monterey cypress CNPS - 1B.2, Cal IPC -
Fruits and Seeds of Genera in the Subfamily Faboideae (Fabaceae)
Fruits and Seeds of United States Department of Genera in the Subfamily Agriculture Agricultural Faboideae (Fabaceae) Research Service Technical Bulletin Number 1890 Volume I December 2003 United States Department of Agriculture Fruits and Seeds of Agricultural Research Genera in the Subfamily Service Technical Bulletin Faboideae (Fabaceae) Number 1890 Volume I Joseph H. Kirkbride, Jr., Charles R. Gunn, and Anna L. Weitzman Fruits of A, Centrolobium paraense E.L.R. Tulasne. B, Laburnum anagyroides F.K. Medikus. C, Adesmia boronoides J.D. Hooker. D, Hippocrepis comosa, C. Linnaeus. E, Campylotropis macrocarpa (A.A. von Bunge) A. Rehder. F, Mucuna urens (C. Linnaeus) F.K. Medikus. G, Phaseolus polystachios (C. Linnaeus) N.L. Britton, E.E. Stern, & F. Poggenburg. H, Medicago orbicularis (C. Linnaeus) B. Bartalini. I, Riedeliella graciliflora H.A.T. Harms. J, Medicago arabica (C. Linnaeus) W. Hudson. Kirkbride is a research botanist, U.S. Department of Agriculture, Agricultural Research Service, Systematic Botany and Mycology Laboratory, BARC West Room 304, Building 011A, Beltsville, MD, 20705-2350 (email = [email protected]). Gunn is a botanist (retired) from Brevard, NC (email = [email protected]). Weitzman is a botanist with the Smithsonian Institution, Department of Botany, Washington, DC. Abstract Kirkbride, Joseph H., Jr., Charles R. Gunn, and Anna L radicle junction, Crotalarieae, cuticle, Cytiseae, Weitzman. 2003. Fruits and seeds of genera in the subfamily Dalbergieae, Daleeae, dehiscence, DELTA, Desmodieae, Faboideae (Fabaceae). U. S. Department of Agriculture, Dipteryxeae, distribution, embryo, embryonic axis, en- Technical Bulletin No. 1890, 1,212 pp. docarp, endosperm, epicarp, epicotyl, Euchresteae, Fabeae, fracture line, follicle, funiculus, Galegeae, Genisteae, Technical identification of fruits and seeds of the economi- gynophore, halo, Hedysareae, hilar groove, hilar groove cally important legume plant family (Fabaceae or lips, hilum, Hypocalypteae, hypocotyl, indehiscent, Leguminosae) is often required of U.S.