Final Report on the Project
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A Novel Rhabdovirus Infecting Newly Discovered Nycteribiid Bat Flies
www.nature.com/scientificreports OPEN Kanyawara Virus: A Novel Rhabdovirus Infecting Newly Discovered Nycteribiid Bat Flies Received: 19 April 2017 Accepted: 25 May 2017 Infesting Previously Unknown Published: xx xx xxxx Pteropodid Bats in Uganda Tony L. Goldberg 1,2,3, Andrew J. Bennett1, Robert Kityo3, Jens H. Kuhn4 & Colin A. Chapman3,5 Bats are natural reservoir hosts of highly virulent pathogens such as Marburg virus, Nipah virus, and SARS coronavirus. However, little is known about the role of bat ectoparasites in transmitting and maintaining such viruses. The intricate relationship between bats and their ectoparasites suggests that ectoparasites might serve as viral vectors, but evidence to date is scant. Bat flies, in particular, are highly specialized obligate hematophagous ectoparasites that incidentally bite humans. Using next- generation sequencing, we discovered a novel ledantevirus (mononegaviral family Rhabdoviridae, genus Ledantevirus) in nycteribiid bat flies infesting pteropodid bats in western Uganda. Mitochondrial DNA analyses revealed that both the bat flies and their bat hosts belong to putative new species. The coding-complete genome of the new virus, named Kanyawara virus (KYAV), is only distantly related to that of its closest known relative, Mount Elgon bat virus, and was found at high titers in bat flies but not in blood or on mucosal surfaces of host bats. Viral genome analysis indicates unusually low CpG dinucleotide depletion in KYAV compared to other ledanteviruses and rhabdovirus groups, with KYAV displaying values similar to rhabdoviruses of arthropods. Our findings highlight the possibility of a yet- to-be-discovered diversity of potentially pathogenic viruses in bat ectoparasites. Bats (order Chiroptera) represent the second largest order of mammals after rodents (order Rodentia). -
Seasonal Shedding of Coronaviruses in Straw-Colored Fruit Bats at Urban Roosts in Africa
Seasonal Shedding of Coronaviruses in Straw-colored Fruit Bats at Urban Roosts in Africa The adaptation of bats (order Chiroptera) to use and For these reasons, we assessed the seasonality of occupy human dwellings across the planet has created coronavirus (CoV) shedding by the straw-colored intensive bat-human interfaces. Because bats provide fruit bat (Eidolon helvum) by passively collecting 97 important ecosystem services and also host and shed fecal samples on a monthly basis during a entire year zoonotic viruses, these interfaces represent a double in two urban colonies: Accra, Ghana (West Africa) challenge: i) the conservation of bats and their services and Morogoro, Tanzania (East Africa; Fig 1). Sampling and ii) the prevention of viral spillover. collection was conducted under the same trees during Many species of bats have evolved a seasonal life the study period. This species of fruit bat shows a single history that has resulted in the development of specific birth pulse during the year, its colonies show spectacular reproductive and foraging activities during distinctive periodical changes in size, and similarly to other tree- periods of the year. For example, many species mate, roosting megabats, several roosts are located in busy give birth, and nurse during particular and predictable urban centers across sub-Saharan Africa. Moreover, times of the year. Moreover, bat migration can produce we concomitantly collected data on the roost sizes predictable variations in colony sizes during a typical and precipitation levels over time, and we established year, from a complete absence of bats to the aggregation the reproductive periods through the year (birth of millions of individuals depending on the season. -
Zoologische Mededelingen
ZOOLOGISCHE MEDEDELINGEN UITGEGEVEN DOOR HET RIJKSMUSEUM VAN NATUURLIJKE HISTORIE TE LEIDEN (MINISTERIE VAN CULTUUR, RECREATIE EN MAATSCHAPPELIJK WERK) Deel 55 no. 14 4 maart 1980 A NEW FRUIT BAT OF THE GENUS MYONYCTERIS MATSCHIE, 1899, FROM EASTERN KENYA AND TANZANIA (MAMMALIA, MEGACHIROPTERA) by W. BERGMANS Instituut voor Taxonomische Zoölogie, Universiteit van Amsterdam With 4 text-figures ABSTRACT Myonycteris relicta n. sp. is described from the Shimba Hills in southeast Kenya and from the Usambara Mountains in northeast Tanzania. The species is larger than the only other known African mainland species of the genus, Myonycteris torquata (Dobson, 1878), from the Central and West African rain forests and, if compared to M. torquata and the only other species in the genus, M. brachycephala (Bocage, 1889) from São Tomé, has a relatively longer rostrum, a more deflected cranial axis, and further differs in number, shape and position of its teeth. The new species provides new arguments for the relationship between the genera Myonycteris Matschie, 1899, and Lissonycteris Andersen, 1912. It is believed that Myonycteris relicta may be a forest species and as such restricted to isolated East African forests. INTRODUCTION During a visit to the Zoologisches Museum in Berlin (ZMB), in April 1979, the author found two fruit bat specimens from the Tanzanian Usa- mbara Mountains, which proved to represent an undescribed taxon. Later, in June 1979, Dr C. Smeenk of the Rijksmuseum van Natuurlijke Historie at Leiden (RMNH) recognized a third specimen of this taxon in newly acquired material from the Shimba Hills in southeast Kenya. The bats differ on specific level from all other known fruit bats, and are described in the present paper. -
Chiroptera: Pteropodidae)
Chapter 6 Phylogenetic Relationships of Harpyionycterine Megabats (Chiroptera: Pteropodidae) NORBERTO P. GIANNINI1,2, FRANCISCA CUNHA ALMEIDA1,3, AND NANCY B. SIMMONS1 ABSTRACT After almost 70 years of stability following publication of Andersen’s (1912) monograph on the group, the systematics of megachiropteran bats (Chiroptera: Pteropodidae) was thrown into flux with the advent of molecular phylogenetics in the 1980s—a state where it has remained ever since. One particularly problematic group has been the Austromalayan Harpyionycterinae, currently thought to include Dobsonia and Harpyionycteris, and probably also Aproteles.Inthis contribution we revisit the systematics of harpyionycterines. We examine historical hypotheses of relationships including the suggestion by O. Thomas (1896) that the rousettine Boneia bidens may be related to Harpyionycteris, and report the results of a series of phylogenetic analyses based on new as well as previously published sequence data from the genes RAG1, RAG2, vWF, c-mos, cytb, 12S, tVal, 16S,andND2. Despite a striking lack of morphological synapomorphies, results of our combined analyses indicate that Boneia groups with Aproteles, Dobsonia, and Harpyionycteris in a well-supported, expanded Harpyionycterinae. While monophyly of this group is well supported, topological changes within this clade across analyses of different data partitions indicate conflicting phylogenetic signals in the mitochondrial partition. The position of the harpyionycterine clade within the megachiropteran tree remains somewhat uncertain. Nevertheless, biogeographic patterns (vicariance-dispersal events) within Harpyionycterinae appear clear and can be directly linked to major biogeographic boundaries of the Austromalayan region. The new phylogeny of Harpionycterinae also provides a new framework for interpreting aspects of dental evolution in pteropodids (e.g., reduction in the incisor dentition) and allows prediction of roosting habits for Harpyionycteris, whose habits are unknown. -
Figs1 ML Tree.Pdf
100 Megaderma lyra Rhinopoma hardwickei 71 100 Rhinolophus creaghi 100 Rhinolophus ferrumequinum 100 Hipposideros armiger Hipposideros commersoni 99 Megaerops ecaudatus 85 Megaerops niphanae 100 Megaerops kusnotoi 100 Cynopterus sphinx 98 Cynopterus horsfieldii 69 Cynopterus brachyotis 94 50 Ptenochirus minor 86 Ptenochirus wetmorei Ptenochirus jagori Dyacopterus spadiceus 99 Sphaerias blanfordi 99 97 Balionycteris maculata 100 Aethalops alecto 99 Aethalops aequalis Thoopterus nigrescens 97 Alionycteris paucidentata 33 99 Haplonycteris fischeri 29 Otopteropus cartilagonodus Latidens salimalii 43 88 Penthetor lucasi Chironax melanocephalus 90 Syconycteris australis 100 Macroglossus minimus 34 Macroglossus sobrinus 92 Boneia bidens 100 Harpyionycteris whiteheadi 69 Harpyionycteris celebensis Aproteles bulmerae 51 Dobsonia minor 100 100 80 Dobsonia inermis Dobsonia praedatrix 99 96 14 Dobsonia viridis Dobsonia peronii 47 Dobsonia pannietensis 56 Dobsonia moluccensis 29 Dobsonia anderseni 100 Scotonycteris zenkeri 100 Casinycteris ophiodon 87 Casinycteris campomaanensis Casinycteris argynnis 99 100 Eonycteris spelaea 100 Eonycteris major Eonycteris robusta 100 100 Rousettus amplexicaudatus 94 Rousettus spinalatus 99 Rousettus leschenaultii 100 Rousettus aegyptiacus 77 Rousettus madagascariensis 87 Rousettus obliviosus Stenonycteris lanosus 100 Megaloglossus woermanni 100 91 Megaloglossus azagnyi 22 Myonycteris angolensis 100 87 Myonycteris torquata 61 Myonycteris brachycephala 33 41 Myonycteris leptodon Myonycteris relicta 68 Plerotes anchietae -
Conventional Wisdom on Roosting Behaviour of Australian
Conventional wisdom on roosting behaviour of Australian flying foxes - a critical review, and evaluation using new data Tamika Lunn1, Peggy Eby2, Remy Brooks1, Hamish McCallum1, Raina Plowright3, Maureen Kessler4, and Alison Peel1 1Griffith University 2University of New South Wales 3Montana State University 4Montana State University System April 12, 2021 Abstract 1. Fruit bats (Family: Pteropodidae) are animals of great ecological and economic importance, yet their populations are threatened by ongoing habitat loss and human persecution. A lack of ecological knowledge for the vast majority of Pteropodid bat species presents additional challenges for their conservation and management. 2. In Australia, populations of flying-fox species (Genus: Pteropus) are declining and management approaches are highly contentious. Australian flying-fox roosts are exposed to management regimes involving habitat modification, either through human-wildlife conflict management policies, or vegetation restoration programs. Details on the fine-scale roosting ecology of flying-foxes are not sufficiently known to provide evidence-based guidance for these regimes and the impact on flying-foxes of these habitat modifications is poorly understood. 3. We seek to identify and test commonly held understandings about the roosting ecology of Australian flying-foxes to inform practical recommendations and guide and refine management practices at flying-fox roosts. 4. We identify 31 statements relevant to understanding of flying-fox roosting structure, and synthesise these in the context of existing literature. We then contribute contemporary data on the fine-scale roosting structure of flying-fox species in south-eastern Queensland and north- eastern New South Wales, presenting a 13-month dataset from 2,522 spatially referenced roost trees across eight sites. -
A Review of the Pteropus Rufus (É. Geoffroy, 1803) Colonies Within The
ARTICLE IN PRESS - EARLY VIEW MADAGASCAR CONSERVATION & DEVELOPMENT VOLUME 11 | ISSUE 1 — JUNE 2016 page 1 ARTICLE http://dx.doi.org/10.4314/mcd.v11i1.7 A review of the Pteropus rufus (É. Geoffroy, 1803) colonies within the Tolagnaro region of southeast Madagascar – an assessment of neoteric threats and conservation condition Sam Hyde RobertsI, Mark D. JacobsI, Ryan M. ClarkI, Correspondence: Charlotte M. DalyII, Longosoa H. TsimijalyIII, Retsiraiky J. Sam Hyde Roberts RossizelaIII, Samuel T. PrettymanI SEED Madagascar, Studio 7, 1A Beethoven Street, London W10 4LG, United Kingdom Email: [email protected] ABSTRACT soit parce qu’elles se sont déplacées suite à des dérangements. We surveyed 10 Pteropus rufus roost sites within the sou- Les effectifs d’une seule colonie semblent avoir diminué de theastern Anosy Region of Madagascar to provide an update on manière significative tandis que ceux de trois autres colonies the areas’ known flying fox population and its conservation status. semblent avoir été maintenus à leur niveau. Notre étude a montré We report on two new colonies from Manambaro and Mandena que l'abondance globale de P. rufus dans la région n’a augmenté and provide an account of the colonies first reported and last as- que d’un pourcent depuis 2006 et que cette augmentation était le sessed in 2006. Currently only a solitary roost site receives any résultat de la protection garantie au dortoir dans la réserve privée formal protection (Berenty) whereas further two colonies rely so- de Berenty. À la lumière d'un décret qui a imposé une période de lely on taboo ‘fady’ for their security. -
Index of Handbook of the Mammals of the World. Vol. 9. Bats
Index of Handbook of the Mammals of the World. Vol. 9. Bats A agnella, Kerivoula 901 Anchieta’s Bat 814 aquilus, Glischropus 763 Aba Leaf-nosed Bat 247 aladdin, Pipistrellus pipistrellus 771 Anchieta’s Broad-faced Fruit Bat 94 aquilus, Platyrrhinus 567 Aba Roundleaf Bat 247 alascensis, Myotis lucifugus 927 Anchieta’s Pipistrelle 814 Arabian Barbastelle 861 abae, Hipposideros 247 alaschanicus, Hypsugo 810 anchietae, Plerotes 94 Arabian Horseshoe Bat 296 abae, Rhinolophus fumigatus 290 Alashanian Pipistrelle 810 ancricola, Myotis 957 Arabian Mouse-tailed Bat 164, 170, 176 abbotti, Myotis hasseltii 970 alba, Ectophylla 466, 480, 569 Andaman Horseshoe Bat 314 Arabian Pipistrelle 810 abditum, Megaderma spasma 191 albatus, Myopterus daubentonii 663 Andaman Intermediate Horseshoe Arabian Trident Bat 229 Abo Bat 725, 832 Alberico’s Broad-nosed Bat 565 Bat 321 Arabian Trident Leaf-nosed Bat 229 Abo Butterfly Bat 725, 832 albericoi, Platyrrhinus 565 andamanensis, Rhinolophus 321 arabica, Asellia 229 abramus, Pipistrellus 777 albescens, Myotis 940 Andean Fruit Bat 547 arabicus, Hypsugo 810 abrasus, Cynomops 604, 640 albicollis, Megaerops 64 Andersen’s Bare-backed Fruit Bat 109 arabicus, Rousettus aegyptiacus 87 Abruzzi’s Wrinkle-lipped Bat 645 albipinnis, Taphozous longimanus 353 Andersen’s Flying Fox 158 arabium, Rhinopoma cystops 176 Abyssinian Horseshoe Bat 290 albiventer, Nyctimene 36, 118 Andersen’s Fruit-eating Bat 578 Arafura Large-footed Bat 969 Acerodon albiventris, Noctilio 405, 411 Andersen’s Leaf-nosed Bat 254 Arata Yellow-shouldered Bat 543 Sulawesi 134 albofuscus, Scotoecus 762 Andersen’s Little Fruit-eating Bat 578 Arata-Thomas Yellow-shouldered Talaud 134 alboguttata, Glauconycteris 833 Andersen’s Naked-backed Fruit Bat 109 Bat 543 Acerodon 134 albus, Diclidurus 339, 367 Andersen’s Roundleaf Bat 254 aratathomasi, Sturnira 543 Acerodon mackloti (see A. -
Updates to the Zoonotic Niche Map of Ebola Virus Disease in Africa
RESEARCH ADVANCE Updates to the zoonotic niche map of Ebola virus disease in Africa David M Pigott1,2*, Anoushka I Millear1, Lucas Earl1, Chloe Morozoff1*, Barbara A Han3, Freya M Shearer2, Daniel J Weiss4,5, Oliver J Brady2, Moritz UG Kraemer4,5, Catherine L Moyes2, Samir Bhatt4,5, Peter W Gething4,5, Nick Golding2,6, Simon I Hay1,2 1Institute for Health Metrics and Evaluation, University of Washington, Seattle, United States; 2Oxford Big Data Institute, Li Ka Shing Centre for Health Information and Discovery, Oxford, United Kingdom; 3Cary Institute of Ecosystem Studies, New York, United States; 4Spatial Ecology and Epidemiology Group, University of Oxford, Oxford, United Kingdom; 5Department of Zoology, University of Oxford, Oxford, United Kingdom; 6Department of BioSciences, University of Melbourne, Parkville, Australia Abstract As the outbreak of Ebola virus disease (EVD) in West Africa is now contained, attention is turning from control to future outbreak prediction and prevention. Building on a previously published zoonotic niche map (Pigott et al., 2014), this study incorporates new human and animal occurrence data and expands upon the way in which potential bat EVD reservoir species are incorporated. This update demonstrates the potential for incorporating and updating data used to generate the predicted suitability map. A new data portal for sharing such maps is discussed. This output represents the most up-to-date estimate of the extent of EVD zoonotic risk in Africa. These maps can assist in strengthening surveillance and response capacity to contain viral haemorrhagic fevers. DOI: 10.7554/eLife.16412.001 *For correspondence: pigottdm@ uw.edu (DMP); [email protected] (CM) Competing interest: See page 10 Introduction Since the index case in 2013, the West African Ebola epidemic has killed more than 11,000 people Funding: See page 10 (World Heath Organization, 2016) and exposed national and international inadequacies in pan- Received: 30 March 2016 demic preparedness and response (Moon et al., 2015). -
African Bat Conservation News Template
Volume 33 African Bat Conservation News November 2013 ISSN 1812-1268 © ECJ Seamark, 2009 (AfricanBats) © ECJ Seamark, 2007 (AfricanBats) Above: A Egyptian Fruit Bat (Rousettus aegyptiacus) caught in the Pufuri area, Kruger National Park, South Africa. Inside this issue: Recent Literature 2 Conferences 2 Zoological Society of Southern Africa Conference 2 16th International Bat Research Conference 5 Published Books / Reports 16 Published Papers 16 Notice Board 26 Download and subscribe to African Bat Conservation News published by AfricanBats at: www.africanbats.org The views and opinions expressed in articles are no necessarily those of the editor or publisher. Articles and news items appearing in African Bat Conservation News may be reprinted, provided the author’s and newsletter reference are given. African Bat Conservation News November 2013 vol. 33 2 ISSN 1812-1268 Recent Literature Conference Zoological Society of Southern Africa 2013 Below are abstracts that are specifically related to African bat species. Papers The importance of ecology and physiology in a changing world: Wahlberg Epauletted Fruit Bat (Epomophorus wahlbergi) as an example Colleen T. Downs - School of Life Sciences, University of KwaZulu-Natal, Globally the biggest threats to mammal and bird populations in the short-term are human development, population growth, urbanisation, alien invasions and land transformation resulting in habitat loss for species. In addition climate change is another threat in the long- term. However, to assess how these threats impact on a species and how they may survive both ecological and physiological studies are required. The importance of interdisciplinary studies is highlighted using the example of Wahlberg’s epauletted fruit bat Epomophorus wahlbergi. -
Monthly Report
Monthly Report April 2017 Nyika National Park. Photo credit Mike Langton The “refusing to write any more1 of Matt’s dumb reports” bat The ABC Staff Dr Emma Stone Matt Town Godwin Zimba Founder/Director Senior Research Assistant Community Engagement Officer Kathy Halsall Peter Phiri Jess Dangerfield Urban Research Assistant Research Assistant Research Assistant, LNP Rachel Midgley Kelly Rosier Urban Bat Research and Conservation Urban Field Assistant, Lilongwe Assistant, Lilongwe 1 Contents News from Nyika NP ................................................................................................................. 3 News from Nyika ........................................................................................................................... 3 New Species: Rousettus lanosus ................................................................................................. 3 First Vesper (A) Roost Discovered .............................................................................................. 3 Community Work in the Staff Village ......................................................................................... 4 Mzuzu Bat Hunter and Bat Meat Trade in the North ............................................................... 4 Urban Bat Project News ........................................................................................................... 5 Staff News ...................................................................................................................................... 5 Update -
Investigating the Role of Bats in Emerging Zoonoses
12 ISSN 1810-1119 FAO ANIMAL PRODUCTION AND HEALTH manual INVESTIGATING THE ROLE OF BATS IN EMERGING ZOONOSES Balancing ecology, conservation and public health interest Cover photographs: Left: © Jon Epstein. EcoHealth Alliance Center: © Jon Epstein. EcoHealth Alliance Right: © Samuel Castro. Bureau of Animal Industry Philippines 12 FAO ANIMAL PRODUCTION AND HEALTH manual INVESTIGATING THE ROLE OF BATS IN EMERGING ZOONOSES Balancing ecology, conservation and public health interest Edited by Scott H. Newman, Hume Field, Jon Epstein and Carol de Jong FOOD AND AGRICULTURE ORGANIZATION OF THE UNITED NATIONS Rome, 2011 Recommended Citation Food and Agriculture Organisation of the United Nations. 2011. Investigating the role of bats in emerging zoonoses: Balancing ecology, conservation and public health interests. Edited by S.H. Newman, H.E. Field, C.E. de Jong and J.H. Epstein. FAO Animal Production and Health Manual No. 12. Rome. The designations employed and the presentation of material in this information product do not imply the expression of any opinion whatsoever on the part of the Food and Agriculture Organization of the United Nations (FAO) concerning the legal or development status of any country, territory, city or area or of its authorities, or concerning the delimitation of its frontiers or boundaries. The mention of specific companies or products of manufacturers, whether or not these have been patented, does not imply that these have been endorsed or recommended by FAO in preference to others of a similar nature that are not mentioned. The views expressed in this information product are those of the author(s) and do not necessarily reflect the views of FAO.