DOCSLIB.ORG

Pichia (Kodamaea) Ohmeri CMGB-ST19 - a NEW STRAIN the Stability of the Structural Organization of Ph.D

Total Page：16

File Type：pdf, Size：1020Kb

Download full-text PDF Read full-text
Pichia (Kodamaea) Ohmeri CMGB-ST19 - a NEW STRAIN the Stability of the Structural Organization of Ph.D AgroLifeAgroLife Scientific Scientific JournalJournal - -Volume Volume 8, 8, Number Number 1, 1,2019 2019 effects of degradation, improving soil Kachinsky N.A., 1965. Soil physics. Moscow. Science, ISSNISSN 2285-5718; 2285-5718; ISSN ISSN CD-ROM CD-ROM 2285-5726;2285-5726; ISSN ONLINEONLINE 2286-0126; 2286-0126; ISSN-L ISSN-L 2285-5718 2285-5718 valuation, conducting monitoring studies, and Higher School. 265 p. Krivenkov N.P., 1967. The effect of soil density on the so on (French et al., 1979; Tansley, 1935). flow of nutrients into plants. Abstract of dissertation Pichia (Kodamaea) ohmeri CMGB-ST19 - A NEW STRAIN The stability of the structural organization of Ph.D. Agricultural Institute. Leningrad. 18 p. WITH COMPLEX BIOTECHNOLOGICAL PROPERTIES soils and, due to it, water, heat, gas and food Lee K.T., Foster R.C., 1991. Soil fauna and soil structure. Austral Y. Soil Res. Vol. 29, No. 6, 745- regimes are determined in the general result of Viorica CORBU, Tatiana VASSU, Ortansa CSUTAK their physico-mechanical properties. This 775. French N., Ryshkovsky L., Titlyanova A.A. et al., 1979. circumstance reflects the importance of Comparison of the structure of organic matter in University of Bucharest, Faculty of Biology, 1-3 Aleea Portocalelor, studying the physicomechanical properties of different ecosystems. Tom. 10, No. 2, 8-21. 060101 Bucharest, Romania soils, which are the basis for predicting the Friedland V.M., 1972. The structure of the soil cover. effects of various kinds of anthropogenic stress Moscow. Think. 423 p. Corresponding author email: [email protected] on the soil and soil cover. Hadas A., 1990. Directional strength in aggregates as affected by aggregate volume and by a wet/dry cycle. Such physical and mechanical characteristics of Vol. 41, No. 1, 85-93. Abstract the soil as cohesion (s), angle of internal Milanovsky E.Yu., Shein E.V., 2002. Mechanisms of friction (φ), shear resistance (τ) have a decisive formation and stability of the soil structure. Soil The yeast species Pichia ohmeri has been described as far, as biocontrol agent. The present work deals with the resistance to natural and anthropogenic impacts. complex characterization of a new yeast strain CMGB-ST19 isolated from the surface of jam roses (Rosa damascena) influence on the erosion resistance of the soil petals. The conventional taxonomy tests and the BiologMicroLog system allowed the identification of CMGB-ST19 as (Mirtskhulava, 1990). Moscow. Science, p. 83. Mirtskhulava T.E., 1990. Reliability of the functioning of Pichia ohmeri. The results were confirmed using ITS-PCR, the strain being renamed as Pichia ohmeri CMGB-ST19. agroecological systems. Bulletin of science, No. 12, Various tests were performed for determination of its biotechnological properties. P. ohmeri CMGB-ST19 presented CONCLUSIONS 80-83. good lipolytic activity and hydrolysed tributyrin releasing the butyric acid with positive impact on human health. Mirtskhulava T.E., 2001. Forecast soil washout. Reports Moreover, the strain showed antimicrobial activity against 11 Candida and Saccharomyces strains in presence of low It should be noted that with agricultural use, the of the RAAS. No. 4, 24-27. pH values. During the preliminary assays for bioethanol and biosurfactants synthesis, significant growth rates were soil is exposed to the most versatile (in terms of Oades J.M., 1991. Waters, Aggregate hierarchy in soils. recorded after 24 hours on molasses, respectively, after 72 hours on D-xylose when morphological changes were also observed related to cell stress. In conclusion, P. ohmeri CMGB-ST19 represents an interesting newly characterized Austral. J. Soil. Res. Vol. 29, No. 6, 815-828. the number of disturbing factors) and intensive yeast strain with high potential for a wide range of biotechnological applications. Reid J.B., Goss M.I., 1981. Effect of living roots of impacts, which affects the ecological situation different plant species on the aggregate stability of Key words: Pichia ohmeri, lipase, antimicrobial activity, molasses, D-xylose. of agricultural landscapes and ecosystems as a two arable Soils. Vol. 32, 521-547. whole. Rode A.A., 1947. The podzol process and soil evolution. Soil structuring under the influence of grasses M.: Geografizdat. 140 p. INTRODUCTION biotechnological potential (Al-Sweih, 2011; is most effective in areas with sufficient rainfall Snakin V.V. et al., 1995. Ecological assessment of soil Distasi et al., 2015; Kanno et al., 2017). In and on irrigated land. resistance to human impact. No. 5, 50-57. Kodamaea ohmeri belongs to the Kodamaea 2013, Kitcha et al reported good level of lipid Sudakov A.V., Petrushenko S.E., 1982. The effect of soil genus (class Ascomycetae, Saccharomycetaeae production when K. ohmeri was grown on An important task of modern agriculture is the compaction on the growth of root systems and the development of areas of ecologization of agri- accumulation of above-ground corn mass. Effect of family) which includes species isolated both crude glycerol. K. ohmeri was also reported as cultural technologies that increase the stability fertilizers and tillage on their physical properties and from environment and entomopathogenic presenting high degradation levels of patulin of soil fertility and the productivity of crop yield. Lenidrad, 10-15. organisms. K. ohmeri is well integrated in the and recommended it for patulin detoxification agroecosystems. Sheptukhov V.N., 1993. Scientific and experimental new Kodamaea genus which forms both hat- of apple derived products. A new K. ohmeri substantiation of optimization of agrophysical The results show that the annual intake of fresh shaped and spherical spores depending on the strain isolated from fish gut had high phytase properties and structure of the root zone of the soil in mating type. Subsequent, other Kodamaea activity which can be used as supplement for plant residues into the soil in winter rye crops order to increase the sustainability of crop yields. provides a significant increase in the swelling Nemchinovka. 37 p. species were described (K. anthophila, K. animal and human nutrition to liberate the of the structure compared to potatoes and the Tansley A.G., 1935. The use and abuse of vegetational kakaduensis, K. laetipori, K. nitidulidarum, K. inorganic phosphate from phytic acid from crop rotation field. concepts and terms. Ecology, No. 16, 248-307. transpacifica) proving the necessity to form a grains, increasing thus their nutritional value Vasilievskaya V.D., 1994. Soil resistance to different genus, derived from Yamadazyma (Hirimuthugoda et al., 2006; Li et al., 2007). anthropogenic impacts. // Soil-ecological monitoring which accommodate Pichia species that can Also, K. ohmeri is known as being able to REFERENCES and soil protection. Moscow, 61-79. form hat-shaped spores (Freitas et al., 2013; convert glucose to D-arabitol. Zhu et al. (2010) Vernadsky V.I., 1965. The chemical structure of the Bakhtin P.U., 1969. Studies of physico-mechanical and Earth's biosphere and its environment. Moscow Kurtzman et al., 2011). Kodamaea ohmeri, reported a K. ohmeri strain isolated from technological properties of the main types of soils of Science, 352 p. formerly known as Pichia ohmeri, is isolated honeybee hives and from osmotic natural the USSR. M. Kolos. 271 p. Viter A.F., 1969. Effect of varying soil density on mostly from food industry being involved in environment able to produce high yields of D- Barber S.A., 1988. The bioavailability of nutrients in the fertilizer efficiency and yield. // Scientific notes of fermentation of pickled products (Vivas et al., arabitol from glucose. soil. Mechanical approach. M.: Agropromizdat. 376 the Belotserkovsky Agricultural Institute, vol. 15, 2016). This species was also reported to be The present study focuses on the preliminary p. Part 2, 117-1149. Berezin P.N., Voronin A.D., Shein E.V., 1985. The main Zubkova T.A., 1998. About the nature of mechanical found in sand, marine environment and part of identification of a new strain K. ohmeri strain parameters and methods for quantitative assessment strength of absolutely dry soil aggregates. Pedology. the microbiota of different living animals (CMGB-ST19) isolated from jam roses (Rosa of the soil structure. Pedology, No. 10, 58-68. No. 3, 291-290. (Chakrabarti et al., 2014). Although some damascena) petals and on the investigation of Bulygin S.Yu., 1993. Quantitative assessment of the Westman W.E., 1978. Measuring the inertia and strains of K. ohmeri are known as being its biotechnological potential. erosion hazard of soils. Pedology, No. 3, 74-79. resilience of ecosystems. Vol. 8, No. 11, 705-710. responsible for different types of opportunistic Dokuchaev V.V., 1949. Selected Works. Moscow. Farm, Tom. 2, 426 p. infections there are many studies regarding its 77 MATERIALS AND METHODS tubes with 50 mM glucose. For the negative by a final extension 5 min at 72°C (Biometra T Antimicrobial activity control no carbon source was added. Gradient Thermocycler). The strain CMGB-ST19 was tested for Biological material The ability to assimilate nitrogen sources was The amplicons were digested with 4 restriction antimicrobial activity against potential The yeast strain CMGB-ST19 was isolated tested using a similar protocol. The 10X Yeast endonucleases: Cfo I (5’-GCG/C-3’), Hinf I pathogenic and pathogenic Candida and from the surface of jam roses (Rosa Carbon Base (YCB) (Sigma Aldrich) medium (5’-G/ANTC-3’), Hae III (5’-GG/CC-3’), Msp Saccharomyces strains: Candida albicans damascena) petals from Bucharest Botanical was supplemented with 1% stock solution: I (5’-C/CGG-3’) (10 U/µl, Promega). The ATCC 10231; C. albicans CMGB-Y1 C. Garden (Romania) and maintained in a Revco 7.8% KNO3, 2.6% NaNO2, 5.6% L-lysine or restriction fragments were observed by gel parapsilosis CMGB 79; C. parapsilosis CBS LegaciTM Refrigeration System (Copeland, 5.08% (NH4)2SO4. electrophoresis (1.7% agarose, TBE 0.5X). The 604; C. parapsilosis CMGB-Y3; C. catenulata UK) at -70%, on Yeast Peptone Glucose (YPG) The strain CMGB-ST19 was assessed for size of the amplicons and restriction fragments CMGB-Y7; C.
Load more

Recommended publications
  • Myconet Volume 14 Part One. Outine of Ascomycota – 2009 Part Two
    (topsheet) Myconet Volume 14 Part One. Outine of Ascomycota – 2009 Part Two. Notes on ascomycete systematics. Nos. 4751 – 5113. Fieldiana, Botany H. Thorsten Lumbsch Dept. of Botany Field Museum 1400 S. Lake Shore Dr. Chicago, IL 60605 (312) 665-7881 fax: 312-665-7158 e-mail: [email protected] Sabine M. Huhndorf Dept. of Botany Field Museum 1400 S. Lake Shore Dr. Chicago, IL 60605 (312) 665-7855 fax: 312-665-7158 e-mail: [email protected] 1 (cover page) FIELDIANA Botany NEW SERIES NO 00 Myconet Volume 14 Part One. Outine of Ascomycota – 2009 Part Two. Notes on ascomycete systematics. Nos. 4751 – 5113 H. Thorsten Lumbsch Sabine M. Huhndorf [Date] Publication 0000 PUBLISHED BY THE FIELD MUSEUM OF NATURAL HISTORY 2 Table of Contents Abstract Part One. Outline of Ascomycota - 2009 Introduction Literature Cited Index to Ascomycota Subphylum Taphrinomycotina Class Neolectomycetes Class Pneumocystidomycetes Class Schizosaccharomycetes Class Taphrinomycetes Subphylum Saccharomycotina Class Saccharomycetes Subphylum Pezizomycotina Class Arthoniomycetes Class Dothideomycetes Subclass Dothideomycetidae Subclass Pleosporomycetidae Dothideomycetes incertae sedis: orders, families, genera Class Eurotiomycetes Subclass Chaetothyriomycetidae Subclass Eurotiomycetidae Subclass Mycocaliciomycetidae Class Geoglossomycetes Class Laboulbeniomycetes Class Lecanoromycetes Subclass Acarosporomycetidae Subclass Lecanoromycetidae Subclass Ostropomycetidae 3 Lecanoromycetes incertae sedis: orders, genera Class Leotiomycetes Leotiomycetes incertae sedis: families, genera Class Lichinomycetes Class Orbiliomycetes Class Pezizomycetes Class Sordariomycetes Subclass Hypocreomycetidae Subclass Sordariomycetidae Subclass Xylariomycetidae Sordariomycetes incertae sedis: orders, families, genera Pezizomycotina incertae sedis: orders, families Part Two. Notes on ascomycete systematics. Nos. 4751 – 5113 Introduction Literature Cited 4 Abstract Part One presents the current classification that includes all accepted genera and higher taxa above the generic level in the phylum Ascomycota.
    [Show full text]
  • Supplementary Materials For
    Electronic Supplementary Material (ESI) for RSC Advances. This journal is © The Royal Society of Chemistry 2019 Supplementary materials for: Fungal community analysis in the seawater of the Mariana Trench as estimated by Illumina HiSeq Zhi-Peng Wang b, †, Zeng-Zhi Liu c, †, Yi-Lin Wang d, Wang-Hua Bi c, Lu Liu c, Hai-Ying Wang b, Yuan Zheng b, Lin-Lin Zhang e, Shu-Gang Hu e, Shan-Shan Xu c, *, Peng Zhang a, * 1 Tobacco Research Institute, Chinese Academy of Agricultural Sciences, Qingdao, 266101, China 2 Key Laboratory of Sustainable Development of Polar Fishery, Ministry of Agriculture and Rural Affairs, Yellow Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, Qingdao, 266071, China 3 School of Medicine and Pharmacy, Ocean University of China, Qingdao, 266003, China. 4 College of Science, China University of Petroleum, Qingdao, Shandong 266580, China. 5 College of Chemistry & Environmental Engineering, Shandong University of Science & Technology, Qingdao, 266510, China. a These authors contributed equally to this work *Authors to whom correspondence should be addressed Supplementary Table S1. Read counts of OTUs in different sampled sites. OTUs M1.1 M1.2 M1.3 M1.4 M3.1 M3.2 M3.4 M4.2 M4.3 M4.4 M7.1 M7.2 M7.3 Total number OTU1 13714 398 5405 671 11604 3286 3452 349 3560 2537 383 2629 3203 51204 OTU2 6477 2203 2188 1048 2225 1722 235 1270 2564 5258 7149 7131 3606 43089 OTU3 165 39 13084 37 81 7 11 11 2 176 289 4 2102 16021 OTU4 642 4347 439 514 638 191 170 179 0 1969 570 678 0 10348 OTU5 28 13 4806 7 44 151 10 620 3
    [Show full text]
  • Isolation and Characterization of Unrecorded Yeasts Species in the Family Metschnikowiaceae and Bulleribasidiaceae in Korea
    Journal198 of Species Research 9(3):198-203, 2020JOURNAL OF SPECIES RESEARCH Vol. 9, No. 3 Isolation and characterization of unrecorded yeasts species in the family Metschnikowiaceae and Bulleribasidiaceae in Korea Yuna Park, Soohyun Maeng and Sathiyaraj Srinivasan* Department of Bio & Environmental Technology, College of Natural Science, Seoul Women’s University, Seoul 01797, Republic of Korea *Correspondent: [email protected] The goal of this study was to isolate and identify wild yeasts from soil samples. The 15 wild yeast strains were isolated from the soil samples collected in Pocheon city, Gyeonggi Province, Korea. Among them, four yeast stains were unrecorded, and 11 yeast stains were previously recorded in Korea. To identify wild yeasts, microbiological characteristics were observed by API 20C AUX kit. Pairwise sequence comparisons of the D1/D2 domain of the 26S rRNA were performed using Basic Local Alignment Search Tool (BLAST). Cell morphology of yeast strains was examined by phase contrast microscope. All strains were oval-shaped and polar budding and positive for assimilation of glucose, 2-keto-D-gluconate, N-acetyl-D-glucosamine, D-maltose and D-saccharose (sucrose). There is no official report that describes these four yeast species: one strain of the genus Kodamaea in the family Metschnikowiaceae and three strains of the Hannaella in the family Bulleribasidiaceae. Kodamaea ohmeri YI7, Hannaella kunmingensis YP355, Hannaella luteola YP230 and Hannaella oryzae YP366 were recorded in Korea, for the first time. Keywords: Bulleribasidiaceae, Hannaella, Kodamaea, Metschnikowiaceae, unrecorded yeasts Ⓒ 2020 National Institute of Biological Resources DOI:10.12651/JSR.2020.9.3.198 INTRODUCTION species and has H.
    [Show full text]
  • Kodamaea (Pichia) Ohmeri Peritonitis in a Nine-Year-Old Child in Saudi Arabia Treated with Caspofungin
    Journal of Taibah University Medical Sciences (2015) 10(4), 492e495 Taibah University Journal of Taibah University Medical Sciences www.sciencedirect.com Case Report Kodamaea (Pichia) ohmeri peritonitis in a nine-year-old child in Saudi Arabia treated with caspofungin Nada A. Bokhary, MD a,* and Ibrahim B. Hussain, FAAP b a Department of Pediatric Infectious Disease, King Fahad Medical City, Children Specialised Hospital, Riyadh, KSA b Department of Pediatrics, King Faisal Specialist Hospital & Research Center, Riyadh, KSA Received 10 March 2015; revised 14 August 2015; accepted 14 August 2015; Available online 1 October 2015 .Ó 2015 The Authors ﺍﻟﻤﻠﺨﺺ Production and hosting by Elsevier Ltd on behalf of Taibah -University. This is an open access article under the CC BY ﻛﻮﺩﺍﻣﺎﻳﺎ (ﺑﻴﺘﺸﻴﺎ) ﺃﻭﻣﻴﺮﻱ ﻫﻮ ﻓﻄﺮ ﺍﻧﺘﻬﺎﺯﻱ ﻧﺎﺷﺊ ﻳﺘﺴﺒﺐ ﻓﻲ ﻋﺪﻭﻯ ﻗﺎﺗﻠﺔ. ﻧﻌﺮﺽ -NC-ND license (http://creativecommons.org/licenses/by-nc ﻓﻲ ﻫﺬﺍ ﺍﻟﺘﻘﺮﻳﺮ ﺣﺎﻟﺔ ﻃﻔﻞ ﻳﺒﻠﻎ ﻣﻦ ﺍﻟﻌﻤﺮ ٩ ﺃﻋﻮﺍﻡ ﻳﻌﺎﻧﻲ ﻣﻦ ﺍﻟﻤﺘﻼﺯﻣﺔ ﺍﻟﻜﻠﻮﻳﺔ .(/nd/4.0 ﺍﻟﻤﻘﺎﻭﻣﺔ ﻟﻠﻜﻮﺭﺗﻴﺰﻭﻥ. ﻛﺎﻥ ﺍﻟﻄﻔﻞ ﻋﻠﻰ ﺍﻟﻐﺴﻴﻞ ﺍﻟﺒﺮﻳﺘﻮﻧﻲ ﻭﺍﻟﺴﻴﻜﻠﻮﺳﺒﻮﺭﻳﻦ ﻭ ُﻋﺮﺽ ﻋﻠﻴﻨﺎ ﺑﺤﺎﻟﺔ ﺍﻟﺘﻬﺎﺏ ﺍﻟﺼﻔﺎﻕ ﺑﺴﺒﺐ ﻛﻮﺩﺍﻣﺎﻳﺎ ﺃﻭﻣﻴﺮﻱ. ﺍﺳﺘﺠﺎﺏ ﺍﻟﻄﻔﻞ ﻟﻠﻌﻼﺝ ﺑﻜﺎﺳﺒﻮﻓﻨﺠﻴﻦ ﺍﻟﺬﻱ ﻛﺎﻥ ﺍﻟﻔﻄﺮ ﻣﺘﺤﺴﺲ ﻟﻪ ﻭﺍﻟﺘﻲ ُﻭﺻﻔﺖ ﻟﻪ ﺑﻌﺪ ﺍﻹﺯﺍﻟﺔ ﺍﻟﻔﻮﺭﻳﺔ ﻟﻠﻘﺜﻄﺎﺭ ﺍﻟﺒﺮﻳﺘﻮﻧﻲ. Introduction ﺍﻟﻜﻠﻤﺎﺕ ﺍﻟﻤﻔﺘﺎﺣﻴﻪ: ﻛﻮﺩﺍﻣﺎﻳﺎ ﺃﻭﻣﻴﺮﻱ؛ ﻛﺎﺳﺒﻮﻓﻨﺠﻴﻦ؛ ﺍﻟﺘﻬﺎﺏ ﺍﻟﺼﻔﺎﻕ Kodamaea (Pichia) ohmeri is a yeast belonging to the fungi kingdom and the Saccharomycetes class, Kodamaea genus, Abstract and K. ohmeri species, which was previously called Yama- dazma ohmeri.1 Kodamaea (Pichia) ohmeri is an emerging fatal opportu- It is the teleomorphic form of Candida guilliermondii var. nistic fungal infection. We describe the case of a 9-year- membranaefaciens and is widely used in the food industry for old boy known to have steroid-resistant nephrotic syn- the fermentation of fruits, pickles, and rinds.1 drome.
    [Show full text]
  • Supplement Hoenigl TLID 2021 Global Guideline for the Diagnosis
    Supplementary appendix This appendix formed part of the original submission and has been peer reviewed. We post it as supplied by the authors. Supplement to: Hoenigl M, Salmanton-García J, Walsh TJ, et al. Global guideline for the diagnosis and management of rare mould infections: an initiative of the European Confederation of Medical Mycology in cooperation with the International Society for Human and Animal Mycology and the American Society for Microbiology. Lancet Infect Dis 2021; published online Feb 16. https://doi.org/10.1016/S1473-3099(20)30784-2. 1 Global guideline for the diagnosis and management of rare 2 mold infections: An initiative of the ECMM in cooperation 3 with ISHAM and ASM* 4 5 Authors 6 Martin Hoenigl (FECMM)1,2,3,54,55#, Jon Salmanton-García4,5,30,55, Thomas J. Walsh (FECMM)6, Marcio 7 Nucci (FECMM)7, Chin Fen Neoh (FECMM)8,9, Jeffrey D. Jenks2,3,10, Michaela Lackner (FECMM)11,55, Ro- 8 sanne Sprute4,5,55, Abdullah MS Al-Hatmi (FECMM)12, Matteo Bassetti13, Fabianne Carlesse 9 (FECMM)14,15, Tomas Freiberger16, Philipp Koehler (FECMM)4,5,17,30,55, Thomas Lehrnbecher18, Anil Ku- 10 mar (FECMM)19, Juergen Prattes (FECMM)1,55, Malcolm Richardson (FECMM)20,21,55,, Sanjay Revankar 11 (FECMM)22, Monica A. Slavin23,24, Jannik Stemler4,5,55, Birgit Spiess25, Saad J. Taj-Aldeen26, Adilia Warris 12 (FECMM)27, Patrick C.Y. Woo (FECMM)28, Jo-Anne H. Young29, Kerstin Albus4,30,55, Dorothee Arenz4,30,55, 13 Valentina Arsic-Arsenijevic (FECMM)31,54, Jean-Philippe Bouchara32,33, Terrence Rohan Chinniah34, Anu- 14 radha Chowdhary (FECMM)35, G Sybren de Hoog (FECMM)36, George Dimopoulos (FECMM)37, Rafael F.
    [Show full text]
  • Diversity and Distribution of Hidden Cultivable Fungi Associated with Marine Animals of Antarctica Fungal Biology
    Fungal Biology 123 (2019) 507e516 Contents lists available at ScienceDirect Fungal Biology journal homepage: www.elsevier.com/locate/funbio Diversity and distribution of hidden cultivable fungi associated with marine animals of Antarctica Valeria Martins Godinho a, Maria Theresa Rafaela de Paula a, Debora Amorim Saraiva Silva a, Karla Paresque b, Aline Paternostro Martins c, * Pio Colepicolo c, Carlos Augusto Rosa a, Luiz Henrique Rosa a, a Departamento de Microbiologia, Instituto de Ci^encias Biologicas, Universidade Federal de Minas Gerais, Belo Horizonte, MG, Brazil b Laboratorio de Bentologia, Universidade Federal de Alagoas, Maceio, AL, Brazil c Departamento de Bioquímica, Instituto de Química, Universidade de Sao~ Paulo, Sao~ Paulo, Brazil article info abstract Article history: In the present study, we surveyed the distribution and diversity of fungal assemblages associated with 10 Received 22 November 2018 species of marine animals from Antarctica. The collections yielded 83 taxa from 27 distinct genera, which Received in revised form were identified using molecular biology methods. The most abundant taxa were Cladosporium sp. 1, 17 April 2019 Debaryomyces hansenii, Glaciozyma martinii, Metschnikowia australis, Pseudogymnoascus destructans, Accepted 1 May 2019 Thelebolus cf. globosus, Pseudogymnoascus pannorum, Tolypocladium tundrense, Metschnikowia australis, Available online 14 May 2019 and different Penicillium species. The diversity, richness, and dominance of fungal assemblages ranged Corresponding Editor: Nik Money among the host; however, in general, the fungal community, which was composed of endemic and cold- adapted cosmopolitan taxa distributed across the different sites of Antarctic Peninsula, displayed high Keywords: diversity, richness, and dominance indices. Our results contribute to knowledge about fungal diversity in Antarctic ocean the marine environment across the Antarctic Peninsula and their phylogenetic relationships with species Extremophiles that occur in other cold, temperate, and tropical regions of the World.
    [Show full text]
  • Curriculum Vitae, Page 2
    MEREDITH BLACKWELL Professor Emeritus Affiliate Department of Biological Sciences Department of Biological Sciences Louisiana State University University of South Carolina Baton Rouge, LA 70803 USA Columbia, SC 29208 USA Telephone: 225-578-8562 (messages) e-mail: [email protected] EDUCATION B.S. 1961 Biology, University of Southwestern Louisiana, Lafayette M.S. 1963 Biology, University of Alabama, Tuscaloosa. Fishes of the Cahaba River Drainage System of Alabama (H. J. Boschung, advisor) Ph.D. 1973 Botany, University of Texas at Austin. A Developmental and Taxonomic Study of Protophysarum phloiogenum (C. J. Alexopoulos, advisor) ACADEMIC POSITIONS 1972-1974 Electron Microscopist, University of Florida 1974-1975 Interim Assistant in Botany, University of Florida 1975 (Summer) Faculty, Mountain Lake Biological Station, University of Virginia 1975-1981 Assistant Professor of Biology, Hope College, Holland, Michigan (tenure granted, 1981) 1981-1985 Assistant Professor, Department of Botany, Louisiana State University, Baton Rouge 1985-1988 Associate Professor with tenure, Department of Botany, Louisiana State University, Baton Rouge 1988-1997 Professor, Department of Botany (then Plant Biology, now Biological Sciences), Louisiana State University, Baton Rouge 1997-2014 Boyd Professor, Department of Biological Sciences, Louisiana State University, Baton Rouge 2014- Boyd Professor Emeritus, Department of Biological Sciences, Louisiana State University, Baton Rouge 2014- Affiliate Professor, Department of Biological Sciences, University of
    [Show full text]
  • Notes on Ascomycete Systematics Nos. 4408 - 4750
    VOLUME 13 DECEMBER 31, 2007 Notes on ascomycete systematics Nos. 4408 - 4750 H. Thorsten Lumbsch and Sabine M. Huhndorf (eds.) The Field Museum, Department of Botany, Chicago, USA Abstract Lumbsch, H. T. and S.M. Huhndorf (ed.) 2007. Notes on ascomycete systematics. Nos. 4408 – 4750. Myconet 13: 59 – 99. The present paper presents 342 notes on the taxonomy and nomenclature of ascomycetes (Ascomycota) at the generic and higher levels. Introduction The series ”Notes on ascomycete systematics” has been published in Systema Ascomycetum (1986-1998) and in Myconet since 1999 as hard copies and now at its new internet home at URL: http://www.fieldmuseum.org/myconet/. The present paper presents 342 notes on the taxonomy and nomenclature of ascomycetes (Ascomycota) at the generic and higher levels. The date of electronic publication is given within parentheses at the end of each entry. Notes 4476. Acanthotrema A. Frisch that the genera Acarospora, Polysporinopsis, and Sarcogyne are not monophyletic in their current This monotypic genus was described by Frisch circumscription; see also notes under (2006) to accommodate Thelotrema brasilianum; Acarospora (4477) and Polysporinopsis (4543). see note under Thelotremataceae (4561). (2006- (2006-10-18) 10-18) 4568. Aciculopsora Aptroot & Trest 4477. Acarospora A. Massal. This new genus is described for a single new The genus is restricted by Crewe et al. (2006) to lichenized species collected twice in lowland dry a monophyletic group of taxa related to the type forests of NW Costa Rica (Aptroot et al. 2006). species A. schleicheri. The A. smaragdula group It is placed in Ramalinaceae based on ascus-type.
    [Show full text]
  • Diversity, Distribution, and Ecology of Fungi in the Seasonal Snow of Antarctica
    microorganisms Article Diversity, Distribution, and Ecology of Fungi in the Seasonal Snow of Antarctica Graciéle C.A. de Menezes 1, Soraya S. Amorim 1,Vívian N. Gonçalves 1, Valéria M. Godinho 1, Jefferson C. Simões 2, Carlos A. Rosa 1 and Luiz H. Rosa 1,* 1 Departamento de Microbiologia, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte 31270-901, Brazil; [email protected] (G.C.A.d.M.); [email protected] (S.S.A.); [email protected] (V.N.G.); [email protected] (V.M.G.); [email protected] (C.A.R.) 2 Centro Polar e Climático, Universidade Federal do Rio Grande do Sul, Porto Alegre 91201-970, Brazil; jeff[email protected] * Correspondence: [email protected]; Tel.: +55-31-3409-2749 Received: 13 September 2019; Accepted: 8 October 2019; Published: 12 October 2019 Abstract: We characterized the fungal community found in the winter seasonal snow of the Antarctic Peninsula. From the samples of snow, 234 fungal isolates were obtained and could be assigned to 51 taxa of 26 genera. Eleven yeast species displayed the highest densities; among them, Phenoliferia glacialis showed a broad distribution and was detected at all sites that were sampled. Fungi known to be opportunistic in humans were subjected to antifungal minimal inhibition concentration. Debaryomyces hansenii, Rhodotorula mucilaginosa, Penicillium chrysogenum, Penicillium sp. 3, and Penicillium sp. 4 displayed resistance against the antifungals benomyl and fluconazole. Among them, R. mucilaginosa isolates were able to grow at 37 ◦C. Our results show that the winter seasonal snow of the Antarctic Peninsula contains a diverse fungal community dominated by cosmopolitan ubiquitous fungal species previously found in tropical, temperate, and polar ecosystems.
    [Show full text]
  • Diversité Des Bactéries Halophiles Dans L'écosystème Fromager Et
    Diversité des bactéries halophiles dans l'écosystème fromager et étude de leurs impacts fonctionnels Diversity of halophilic bacteria in the cheese ecosystem and the study of their functional impacts Thèse de doctorat de l'université Paris-Saclay École doctorale n° 581 Agriculture, Alimentation, Biologie, Environnement et Santé (ABIES) Spécialité de doctorat: Microbiologie Unité de Recherche : Micalis Institute, Jouy-en-Josas, France Référent : AgroParisTech Thèse présentée et soutenue à Paris-Saclay, le 01/04/2021 par Caroline Isabel KOTHE Composition du Jury Michel-Yves MISTOU Président Directeur de Recherche, INRAE centre IDF - Jouy-en-Josas - Antony Monique ZAGOREC Rapporteur & Examinatrice Directrice de Recherche, INRAE centre Pays de la Loire Nathalie DESMASURES Rapporteur & Examinatrice Professeure, Université de Caen Normandie Françoise IRLINGER Examinatrice Ingénieure de Recherche, INRAE centre IDF - Versailles-Grignon Jean-Louis HATTE Examinateur Ingénieur Recherche et Développement, Lactalis Direction de la thèse Pierre RENAULT Directeur de thèse Directeur de Recherche, INRAE (centre IDF - Jouy-en-Josas - Antony) 2021UPASB014 : NNT Thèse de doctorat de Thèse “A master in the art of living draws no sharp distinction between her work and her play; her labor and her leisure; her mind and her body; her education and her recreation. She hardly knows which is which. She simply pursues her vision of excellence through whatever she is doing, and leaves others to determine whether she is working or playing. To herself, she always appears to be doing both.” Adapted to Lawrence Pearsall Jacks REMERCIEMENTS Remerciements L'opportunité de faire un doctorat, en France, à l’Unité mixte de recherche MICALIS de Jouy-en-Josas a provoqué de nombreux changements dans ma vie : un autre pays, une autre langue, une autre culture et aussi, un nouveau domaine de recherche.
    [Show full text]
  • An Online Resource for Marine Fungi
    Fungal Diversity https://doi.org/10.1007/s13225-019-00426-5 (0123456789().,-volV)(0123456789().,- volV) An online resource for marine fungi 1,2 3 1,4 5 6 E. B. Gareth Jones • Ka-Lai Pang • Mohamed A. Abdel-Wahab • Bettina Scholz • Kevin D. Hyde • 7,8 9 10 11 12 Teun Boekhout • Rainer Ebel • Mostafa E. Rateb • Linda Henderson • Jariya Sakayaroj • 13 6 6,17 14 Satinee Suetrong • Monika C. Dayarathne • Vinit Kumar • Seshagiri Raghukumar • 15 1 16 6 K. R. Sridhar • Ali H. A. Bahkali • Frank H. Gleason • Chada Norphanphoun Received: 3 January 2019 / Accepted: 20 April 2019 Ó School of Science 2019 Abstract Index Fungorum, Species Fungorum and MycoBank are the key fungal nomenclature and taxonomic databases that can be sourced to find taxonomic details concerning fungi, while DNA sequence data can be sourced from the NCBI, EBI and UNITE databases. Nomenclature and ecological data on freshwater fungi can be accessed on http://fungi.life.illinois.edu/, while http://www.marinespecies.org/provides a comprehensive list of names of marine organisms, including information on their synonymy. Previous websites however have little information on marine fungi and their ecology, beside articles that deal with marine fungi, especially those published in the nineteenth and early twentieth centuries may not be accessible to those working in third world countries. To address this problem, a new website www.marinefungi.org was set up and is introduced in this paper. This website provides a search facility to genera of marine fungi, full species descriptions, key to species and illustrations, an up to date classification of all recorded marine fungi which includes all fungal groups (Ascomycota, Basidiomycota, Blastocladiomycota, Chytridiomycota, Mucoromycota and fungus-like organisms e.g.
    [Show full text]
  • ESCMID† and ECMM‡ Joint Clinical Guidelines for the Diagnosis And
    ESCMID AND ECMM PUBLICATIONS 10.1111/1469-0691.12360 † ‡ ESCMID and ECMM joint clinical guidelines for the diagnosis and management of rare invasive yeast infections M. C. Arendrup1, T. Boekhout2,3,4, M. Akova5, J. F.Meis6,7, O. A. Cornely8, O. Lortholary9,10 and on behalf of the ESCMID EFISG study group and ECMM* 1) Unit of Mycology, Department of Microbiological Surveillance and Research, Statens Serum Institut, Copenhagen, Denmark, 2) CBS Fungal Biodiversity Centre, Institute of the Royal Netherlands Academy of Arts and Sciences (KNAW), 3) Department of Internal Medicine and Infectious Diseases, University Medical Centre, Utrecht, the Netherlands, 4) Shanghai Key Laboratory of Molecular Medical Mycology, Changzheng Hospital, Second Military Medical University, Shanghai, China, 5) Section of Infectious Diseases, Hacettepe University School of Medicine, Ankara, Turkey, 6) Department of Medical Microbiology and Infectious Diseases, Canisius Wilhelmina Hospital, 7) Department of Medical Microbiology, Radboud University Nijmegen Medical Centre, Nijmegen, the Netherlands, 8) 1st Department of Internal Medicine, Clinical Trials Centre Cologne, ZKS K€oln, BMBF 01KN1106, Cologne Excellence Cluster on Cellular Stress Responses in Aging-Associated Diseases (CECAD), University of Cologne, Cologne, Germany, 9) Centre National de Reference Mycoses Invasives et Antifongiques, Unite de Mycologie Moleculaire, Institut Pasteur, CNRS URA3012, and 10) Service des Maladies Infectieuses et Tropicales, H^opital Necker-Enfants malades, APHP, Centre d’Infectiologie
    [Show full text]