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Download the PDF Here Table S1. Analyzed genes FC: fold change; sign.: significantly changed Gene FC sign. FC sign. FC sign. Symbol Ensembl ID pre-diab vs C pre-diab. vs C T2DM vs C T2DM vs C t52 vs t0 t52 vs t0 MARCH2 ENSG00000099785 1.00 no 1.17 yes 1.00 no SEPT3 ENSG00000100167 1.00 no 1.00 no 1.00 no A2BP1 ENSG00000078328 1.00 no 1.00 no 1.00 no AAAS ENSG00000094914 1.00 no 1.00 no 1.00 no AACS ENSG00000081760 1.00 no 0.88 yes 1.14 yes AARS ENSG00000090861 1.00 no 1.00 no 1.00 no AASS ENSG00000008311 0.92 no 1.00 no 0.94 no ABCA7 ENSG00000064687 1.00 no 1.00 no 1.00 no ABCB1 ENSG00000085563 0.92 no 1.00 no 1.00 no ABCB11 ENSG00000073734 1.00 no 1.00 no 1.00 no ABCB4 ENSG00000005471 0.91 no 1.00 no 1.00 no ABCB5 ENSG00000004846 0.94 no 1.00 no 0.93 no ABCC2 ENSG00000023839 0.96 no 1.00 no 1.00 no ABCC6 ENSG00000091262 0.92 no 0.89 no 0.95 no ABCC8 ENSG00000006071 1.00 no 1.00 no 1.00 no ABCC9 ENSG00000069431 1.00 no 1.00 no 1.00 no ABCD1 ENSG00000101986 1.00 no 1.00 no 1.00 no ABCF2 ENSG00000033050 1.00 no 1.00 no 1.00 no ABHD12 ENSG00000100997 1.00 no 1.00 no 1.00 no ABHD14A ENSG00000042022 1.00 no 1.00 no 1.00 no ABHD4 ENSG00000100439 1.11 yes 1.13 yes 0.93 no ABHD5 ENSG00000011198 1.00 no 1.00 no 1.00 no ABL1 ENSG00000097007 1.10 yes 1.00 no 1.00 no ABLIM1 ENSG00000099204 1.00 no 1.00 no 0.78 yes ABP1 ENSG00000002726 0.93 no 1.00 no 1.00 no ACAA1 ENSG00000060971 1.00 no 1.00 no 1.00 no ACACB ENSG00000076555 1.00 no 1.00 no 1.00 no ACADVL ENSG00000072778 1.24 yes 1.14 yes 1.00 no ACAT1 ENSG00000075239 1.00 no 1.00 no 1.00 no ACCN4 ENSG00000072182 1.00 no 1.00 no 1.00 no ACCN5 ENSG00000023843 0.93 no 1.00 no 0.94 no ACD ENSG00000102977 1.00 no 1.00 no 0.95 no ACHE ENSG00000087085 1.00 no 1.00 no 1.00 no ACIN1 ENSG00000100813 1.00 no 1.00 no 1.00 no ACO2 ENSG00000100412 1.00 no 0.84 yes 1.13 yes ACOT7 ENSG00000097021 1.00 no 1.00 no 1.00 no ACOT8 ENSG00000101473 1.00 no 1.00 no 0.93 no A COX3 ENSG00000087008 0.91 yes 1.00 no 1.00 no ACP5 ENSG00000102575 0.95 no 1.00 no 1.00 no ACPP ENSG00000014257 1.00 no 1.08 no 1.00 no ACSBG1 ENSG00000103740 1.00 no 1.00 no 0.97 no ACSL4 ENSG00000068366 1.00 no 0.88 no 1.13 no ACSM3 ENSG00000005187 1.00 no 1.00 no 0.93 no ACTB ENSG00000075624 0.78 yes 1.00 no 1.00 no ACTL6B ENSG00000077080 1.00 no 1.00 no 1.00 no ACTN1 ENSG00000072110 1.00 no 1.00 no 1.00 no ACTN2 ENSG00000077522 1.00 no 1.00 no 1.00 no ACTR5 ENSG00000101442 1.00 no 1.00 no 1.00 no ACTR6 ENSG00000075089 1.00 no 1.00 no 1.00 no ADAM11 ENSG00000073670 1.00 no 1.00 no 1.00 no 2 ADAM22 ENSG00000008277 0.93 no 1.00 no 0.95 no ADAM28 ENSG00000042980 0.95 no 1.00 no 1.00 no ADAM7 ENSG00000069206 0.94 no 1.00 no 1.00 no ADAMTS2 ENSG00000087116 1.00 no 1.00 no 1.00 no ADAMTS6 ENSG00000049192 1.00 no 1.00 no 1.00 no ADAT1 ENSG00000065457 1.00 no 1.00 no 1.07 no ADCK1 ENSG00000063761 1.00 no 1.00 no 1.00 no ADCY2 ENSG00000078295 1.00 no 1.00 no 1.00 no ADCYAP1R1ENSG00000078549 0.92 no 1.00 no 1.00 no ADD1 ENSG00000087274 1.00 no 0.95 no 0.95 no ADD2 ENSG00000075340 1.00 no 1.07 no 0.94 no ADIPOR2 ENSG00000006831 1.13 yes 1.00 no 1.00 no ADNP ENSG00000101126 1.00 no 0.94 no 1.00 no ADRB1 ENSG00000043591 1.00 no 1.00 no 0.94 no ADRBK2 ENSG00000100077 0.97 no 1.00 no 1.00 no ADSL ENSG00000100357 0.91 no 0.91 no 1.00 no ADSS ENSG00000035687 1.00 no 1.00 no 1.00 no AFF4 ENSG00000072364 0.97 no 1.00 no 1.00 no AFM ENSG00000079557 0.95 no 1.00 no 1.00 no AFP ENSG00000081051 0.93 no 1.00 no 0.91 no AGA ENSG00000038002 1.00 no 1.10 no 1.00 no AGK ENSG00000006530 1.00 no 0.88 yes 1.08 no AGPAT4 ENSG00000026652 0.95 no 1.00 no 1.00 no AGPS ENSG00000018510 1.00 no 1.00 no 1.00 no AHCY ENSG00000101444 1.00 no 1.00 no 1.00 no AHRR ENSG00000063438 1.00 no 1.00 no 1.07 no AHSA1 ENSG00000100591 1.00 no 0.91 no 1.00 no AIFM2 ENSG00000042286 1.06 no 1.00 no 1.00 no AK2 ENSG00000004455 0.95 no 1.00 no 1.00 no AKAP11 ENSG00000023516 1.00 no 0.94 no 1.00 no AKAP8L ENSG00000011243 1.00 no 1.00 no 0.91 no AKR1B1 ENSG00000085662 1.00 no 1.00 no 1.00 no AKR7A2 ENSG00000053371 1.00 no 0.89 yes 1.00 no ALAS1 ENSG00000023330 1.00 no 0.87 no 1.00 no ALDH18A1 ENSG00000059573 1.00 no 1.06 no 1.00 no ALDH3A2 ENSG00000072210 1.15 yes 1.00 no 1.00 no ALDH3B1 ENSG00000006534 1.00 no 1.00 no 1.00 no ALG13 ENSG00000072319 1.00 no 1.07 no 1.00 no ALG6 ENSG00000088035 1.00 no 1.11 yes 1.00 no ALG9 ENSG00000086848 1.00 no 1.00 no 1.00 no ALKBH1 ENSG00000100601 1.00 no 1.00 no 1.00 no A LOX5 ENSG00000012779 0.90 no 1.00 no 1.00 no ALPK1 ENSG00000073331 1.06 no 1.00 no 1.05 no ALS2 ENSG00000003393 1.00 no 1.00 no 1.00 no ALS2CR2 ENSG00000082146 1.00 no 1.00 no 1.11 yes A LX4 ENSG00000052850 1.00 no 1.00 no 1.00 no AMACR ENSG00000082196 0.91 no 1.00 no 1.00 no AMELY ENSG00000099721 1.00 no 1.00 no 1.00 no AMMECR1 ENSG00000101935 0.97 no 1.00 no 1.00 no AMPH ENSG00000078053 1.00 no 1.00 no 0.90 no ANAPC4 ENSG00000053900 1.00 no 0.94 no 1.00 no ANAPC5 ENSG00000089053 1.00 no 1.00 no 1.00 no ANGEL1 ENSG00000013523 0.96 no 0.94 no 1.00 no ANGPT2 ENSG00000091879 1.00 no 0.93 no 1.04 no 2 ANGPT4 ENSG00000101280 1.00 no 1.00 no 1.00 no ANK1 ENSG00000029534 0.87 yes 1.00 no 1.00 no ANKIB1 ENSG00000001629 1.00 no 1.00 no 1.13 yes ANKRD10 ENSG00000088448 1.00 no 1.00 no 1.00 no ANKRD12 ENSG00000101745 1.00 no 1.00 no 1.00 no ANKRD13A ENSG00000076513 1.00 no 1.00 no 1.00 no ANKRD24 ENSG00000089847 1.00 no 1.00 no 1.00 no ANKRD44 ENSG00000065413 0.96 no 1.00 no 1.00 no ANKRD54 ENSG00000100124 1.06 no 1.00 no 1.00 no ANKS1A ENSG00000064999 0.87 yes 0.83 yes 1.12 yes ANLN ENSG00000011426 0.89 no 1.00 no 1.00 no AOF2 ENSG00000004487 1.00 no 1.00 no 1.00 no AP1B1 ENSG00000100280 1.00 no 1.00 no 1.09 no AP1G2 ENSG00000092051 0.95 no 1.00 no 1.00 no AP1GBP1 ENSG00000006114 0.95 no 1.00 no 0.99 no AP1M1 ENSG00000072958 1.07 no 1.00 no 1.00 no AP2B1 ENSG00000006125 1.00 no 0.95 no 1.00 no AP2S1 ENSG00000042753 1.00 no 1.13 no 1.00 no AP3B2 ENSG00000103723 0.94 no 1.00 no 0.90 no AP3D1 ENSG00000065000 1.00 no 1.00 no 1.00 no AP3M2 ENSG00000070718 1.00 no 1.00 no 1.00 no AP4E1 ENSG00000081014 1.00 no 1.00 no 1.00 no AP4S1 ENSG00000100478 1.00 no 1.00 no 1.04 no APBA2 ENSG00000034053 1.00 no 1.00 no 1.00 no APBA3 ENSG00000011132 1.00 no 0.89 yes 1.07 no APBB1IP ENSG00000077420 0.94 no 1.00 no 1.00 no APEX1 ENSG00000100823 1.00 no 0.94 no 1.11 yes APLP2 ENSG00000084234 1.00 no 1.00 no 1.00 no APOB ENSG00000084674 0.95 no 1.00 no 1.00 no APOH ENSG00000091583 0.93 no 1.00 no 1.06 no APOL1 ENSG00000100342 1.00 no 1.00 no 1.00 no APOL4 ENSG00000100336 1.00 no 1.04 no 0.96 no APPBP2 ENSG00000062725 1.00 no 1.00 no 1.00 no APRIN ENSG00000083642 1.00 no 1.00 no 1.00 no AQP6 ENSG00000086159 1.00 no 1.00 no 1.00 no AQP8 ENSG00000103375 0.95 no 1.00 no 1.00 no AQP9 ENSG00000103569 1.00 no 1.20 no 1.00 no AQR ENSG00000021776 0.95 no 1.00 no 1.00 no ARAF ENSG00000078061 1.00 no 1.00 no 1.00 no ARCN1 ENSG00000095139 1.00 no 1.00 no 1.11 yes ARF5 ENSG00000004059 1.00 no 1.00 no 1.00 no ARFGAP1 ENSG00000101199 1.00 no 1.07 no 1.00 no ARFGAP3 ENSG00000100262 1.00 no 1.00 no 0.91 yes ARFGEF1 ENSG00000066777 1.00 no 1.00 no 1.07 no ARFRP1 ENSG00000101246 1.00 no 1.00 no 1.04 no ARG2 ENSG00000081181 0.62 no 0.73 no 1.00 no ARHGAP10 ENSG00000071205 1.00 no 1.00 no 1.00 no ARHGAP15 ENSG00000075884 1.00 no 1.00 no 1.07 no ARHGAP28 ENSG00000088756 1.00 no 1.00 no 1.00 no ARHGAP4 ENSG00000089820 0.94 no 1.00 no 1.00 no ARHGAP5 ENSG00000100852 1.00 no 1.00 no 1.00 no ARHGAP6 ENSG00000047648 1.00 no 1.00 no 1.00 no ARHGEF1 ENSG00000076928 0.96 no 1.00 no 1.07 no ARHGEF10L ENSG00000074964 1.00 no 1.00 no 1.11 yes 2 ARHGEF5 ENSG00000050327 0.93 no 1.00 no 1.00 no ARHGEF7 ENSG00000102606 1.00 no 1.00 no 1.00 no ARID1B ENSG00000049618 1.00 no 1.00 no 1.00 no ARID4A ENSG00000032219 1.00 no 1.00 no 1.00 no ARID4B ENSG00000054267 1.00 no 1.00 no 1.05 no ARL2BP ENSG00000102931 0.91 no 0.93 no 1.00 no ARMCX3 ENSG00000102401 1.13 yes 1.00 no 1.16 yes ARNTL2 ENSG00000029153 1.00 no 1.00 no 0.92 no ARPC1A ENSG00000013455 1.00 no 1.00 no 1.14 yes ARS2_HUMANENSG00000087087 1.00 no 1.00 no 1.00 no ARSA ENSG00000100299 1.00 no 1.00 no 1.00 no ARSD ENSG00000006756 1.00 no 1.00 no 1.00 no ARSF ENSG00000062096 0.87 no 1.00 no 1.00 no ARVCF ENSG00000099889 1.00 no 1.00 no 1.07 no ARX ENSG00000004848 1.00 no 0.84 yes 1.00 no ASB2 ENSG00000100628 1.00 no 1.00 no 1.00 no ASB4 ENSG00000005981 0.95 no 1.00 no 1.00 no ASB9 ENSG00000102048 1.00 no 1.36 no 1.00 no ASCC2 ENSG00000100325 1.00 no 1.00 no 1.00 no ASIP ENSG00000101440 1.00 no 1.00 no 1.00 no ASNS ENSG00000070669 0.91 no 1.12 no 1.00 no ASPM ENSG00000066279 0.93 no 1.00 no 0.92 no ASTE1 ENSG00000034533 1.00 no 0.91 no 1.00 no ATG16L1 ENSG00000085978 0.95 no 1.00 no 1.00 no ATG4A ENSG00000101844 1.00 no 1.00 no 1.00 no ATG5 ENSG00000057663 1.00 no 1.00 no 1.00 no ATP11A ENSG00000068650 1.00 no 1.00 no 1.00 no ATP11B ENSG00000058063 0.95 no 1.00 no 1.00 no ATP11C ENSG00000101974 0.95 no 1.00 no 1.00 no ATP12A ENSG00000075673 1.00 no 1.00 no 1.00 no ATP1A2 ENSG00000018625 1.00 no 1.00 no 1.05 no ATP1B3 ENSG00000069849 1.00 no 1.00 no 1.00 no ATP1B4 ENSG00000101892 1.00 no 1.00 no 1.00 no ATP2A3 ENSG00000074370 0.95 no 1.00 no 1.00 no ATP2B1 ENSG00000070961 1.00 no 1.00 no 1.00 no ATP2B3 ENSG00000067842 1.00 no 1.00 no 0.93 no ATP2B4 ENSG00000058668 1.00 no 1.00 no 1.11 yes ATP2C1 ENSG00000017260 1.00 no 1.00 no 1.00 no ATP2C2 ENSG00000064270 1.00 no 1.00 no 0.93 no ATP5D ENSG00000099624 0.89 yes 1.00 no 1.00 no ATP6AP1 ENSG00000071553 1.00 no 1.11 yes 0.79 yes ATP6V0A1 ENSG00000033627 1.06 no 1.07 no 0.96 no ATP6V1D ENSG00000100554 1.12 yes 1.00 no 1.17 yes ATP6V1H ENSG00000047249 1.00 no 1.00 no 0.89 yes ATP8B4
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