Deep-Sea Benthopelagic Calanoid Copepods and Their Colonization of the Near-Bottom Environment Janet M
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Veronica Fernandes
Mesozooplankton Community Structure: Its Seasonal Shifts, Grazing and Growth Potential in the Bay of Bengal -60 -30 0 30 60 0-40 40-200 200-300 300-500 500-1000 0-MLD TT-BT BT-300 m 300-500 m 500-1000 m 9 11 13 15 17 19 ■ 0-MLD ■ TT-BT ❑ 200- 300 • 300- 500 ■ 500- 1000 H' CBI CB2 CB3 CB4 CBS Thesis submitted to Goa University for the degree of 'Doctor of Philosophy in-Marine Sciences Veronica Fernandes National Institute of Oceanography Council of Scientific and Industrial Research Dona Paula, Goa- 403 004, India June 2008 CERTIFICATE This is to certify that Ms. Veronica Fernandes has duly completed the thesis entitled `Mesozooplankton community Structure: Its seasonal shifts, grazing and growth potential in the Bay of Bengal ' under my supervision for the award of the degree of Doctor of Philosophy. This thesis being submitted to the Goa University, Taleigao Plateau, Goa for the award of the degree of Doctor of Philosophy in Marine Sciences is based on original studies carried out by her. The thesis or any part thereof has not been previously submitted for any other degree or diploma in any Universities or Institutions. N. Ramaiah Research Guide Scientist Date: June 16, 2008 National Institute of Oceanography Place: Dona Paula Dona Paula, Goa-403 004 -44 jr- yikazit N t e. \, t' P1114 /414 o , 77 Ko-ce'dP 578 F EA/ e--5 4ci 2 DECLARATION As required under the University Ordinance 0.19.8 (iv), I hereby declare that the present thesis entitled `Mesozooplankton community structure: Its seasonal shifts, grazing and growth potential in the Bay of Bengal ' is my original work carried out in the National Institute of Oceanography, Dona-Paula, Goa and the same has not been submitted in part or in full elsewhere for any other degree or diploma. -
Molecular Species Delimitation and Biogeography of Canadian Marine Planktonic Crustaceans
Molecular Species Delimitation and Biogeography of Canadian Marine Planktonic Crustaceans by Robert George Young A Thesis presented to The University of Guelph In partial fulfilment of requirements for the degree of Doctor of Philosophy in Integrative Biology Guelph, Ontario, Canada © Robert George Young, March, 2016 ABSTRACT MOLECULAR SPECIES DELIMITATION AND BIOGEOGRAPHY OF CANADIAN MARINE PLANKTONIC CRUSTACEANS Robert George Young Advisors: University of Guelph, 2016 Dr. Sarah Adamowicz Dr. Cathryn Abbott Zooplankton are a major component of the marine environment in both diversity and biomass and are a crucial source of nutrients for organisms at higher trophic levels. Unfortunately, marine zooplankton biodiversity is not well known because of difficult morphological identifications and lack of taxonomic experts for many groups. In addition, the large taxonomic diversity present in plankton and low sampling coverage pose challenges in obtaining a better understanding of true zooplankton diversity. Molecular identification tools, like DNA barcoding, have been successfully used to identify marine planktonic specimens to a species. However, the behaviour of methods for specimen identification and species delimitation remain untested for taxonomically diverse and widely-distributed marine zooplanktonic groups. Using Canadian marine planktonic crustacean collections, I generated a multi-gene data set including COI-5P and 18S-V4 molecular markers of morphologically-identified Copepoda and Thecostraca (Multicrustacea: Hexanauplia) species. I used this data set to assess generalities in the genetic divergence patterns and to determine if a barcode gap exists separating interspecific and intraspecific molecular divergences, which can reliably delimit specimens into species. I then used this information to evaluate the North Pacific, Arctic, and North Atlantic biogeography of marine Calanoida (Hexanauplia: Copepoda) plankton. -
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29 December 2000 PROCEEDINGS OF THE BIOLOGICAL SOCIETY OF WASHINGTON 113(4):1079-1088. 2000. Grievella shanki, a new genus and species of scolecitrichid calanoid copepod (Crustacea) from a hydrothermal vent along the southern East Pacific Rise Frank D. Ferrari and E. L. Markhaseva (FDF) Department of Invertebrate Zoology (MRC 534), National Museum of Natural History, Smithsonian Institution, Washington, D.C. 20560, U.S.A; (ELM) Russian Academy of Sciences, Zoological Institute, Universitetskaya nab. I, 199034, St. Petersburg, Russia Abstract.—Four derived states separate the calanoid copepod Grievella shan- ki, new genus and species, from other scolecitrichids: small integumental bumps on the genital complex; an ear-like extension on articulating segment 22 of antenna 1; two lateral setae on the distal exopodal segment of swimming leg 2; a denticle-like attenuation of the proximal praecoxal lobe of maxilla 2. The first probably is an autapomorphy for the species; the second, third and fourth are presumed synapomorphies for species of the new genus. The last derived state is convergent with some species of the calanoid superfamilies Epacteriscoidea, Centropagoidea and Megacalanoidea, but it is a synapomorphy within the Clausocalanoidea to which Grievella shanki belongs. Five setae on the proximal praecoxal lobe of maxilla 2 and three setae on the distal praecoxal lobe of the maxilliped separate Grievella shanki from species of Diaixidae, Parkiidae and Tharybidae, and species of Phaennidae, respectively. The states of these characters for Grievella shanki may be plesiomorphic to the states expressed in Diaixidae, Parkiidae, Tharybidae and Phaennidae so assignment of this species to the Scolecitrichidae is tentative. The number and kind of sensory setae on the distal basal lobe plus exopod of maxilla 2 alone are not adequate to diagnose the Scolecitrichidae, or to separate all of its species from those of the other families with these sensory setae. -
Toward a Global Reference Database of COI Barcodes for Marine Zooplankton
Marine Biology (2021) 168:78 https://doi.org/10.1007/s00227-021-03887-y REVIEW, CONCEPT, AND SYNTHESIS Toward a global reference database of COI barcodes for marine zooplankton Ann Bucklin1 · Katja T. C. A. Peijnenburg2,3 · Ksenia N. Kosobokova4 · Todd D. O’Brien5 · Leocadio Blanco‑Bercial6 · Astrid Cornils7 · Tone Falkenhaug8 · Russell R. Hopcroft9 · Aino Hosia10 · Silke Laakmann7,11 · Chaolun Li12 · Luis Martell10 · Jennifer M. Questel9 · Deborah Wall‑Palmer2 · Minxiao Wang12 · Peter H. Wiebe13 · Agata Weydmann‑Zwolicka14 Received: 6 February 2021 / Accepted: 18 April 2021 © The Author(s) 2021 Abstract Characterization of species diversity of zooplankton is key to understanding, assessing, and predicting the function and future of pelagic ecosystems throughout the global ocean. The marine zooplankton assemblage, including only metazoans, is highly diverse and taxonomically complex, with an estimated ~28,000 species of 41 major taxonomic groups. This review provides a comprehensive summary of DNA sequences for the barcode region of mitochondrial cytochrome oxidase I (COI) for identifed specimens. The foundation of this summary is the MetaZooGene Barcode Atlas and Database (MZGdb), a new open-access data and metadata portal that is linked to NCBI GenBank and BOLD data repositories. The MZGdb provides enhanced quality control and tools for assembling COI reference sequence databases that are specifc to selected taxonomic groups and/or ocean regions, with associated metadata (e.g., collection georeferencing, verifcation of species identifcation, molecular protocols), and tools for statistical analysis, mapping, and visualization. To date, over 150,000 COI sequences for ~ 5600 described species of marine metazoan plankton (including holo- and meroplankton) are available via the MZGdb portal. -
Trabajo De Grado Para Optar Al Título De Biólogo Marino
ESTRUCTURA DEL ZOOPLANCTON Y SU RELACIÓN CON LAS CONDICIONES MARINAS EN EL CARIBE NORTE COLOMBIANO LEIDY JOHANNA HERNÁNDEZ RIVERA Tesis de maestría para optar al título de Magíster en Ciencias Marinas Director ADOLFO SANJUAN MUÑOZ Profesor Asociado Biólogo Marino Magíster en Gestión Ambiental en Zonas Costeras Máster en Biodiversidad Animal Codirector ANDRÉS FRANCO HERRERA Director Departamento de Ciencias Biológicas y Ambientales Biólogo Marino Doctor en Oceanografía PROGRAMA DE MAESTRÍA EN CIENCIAS MARINAS DEPARTAMENTO DE CIENCIAS BIOLÓGICAS Y AMBIENTALES FACULTAD DE CIENCIAS NATURALES E INGENIERÍA UNIVERSIDAD DE BOGOTÁ JORGE TADEO LOZANO SANTA MARTA 2019 ESTRUCTURA DEL ZOOPLANCTON Y SU RELACIÓN CON LAS CONDICIONES MARINAS EN EL CARIBE NORTE COLOMBIANO Hernández Rivera, L. Programa de Maestría en Ciencias Marinas. Departamento de ciencias biológicas y ambientales. facultad de Ciencias Naturales e Ingeniería. Universidad de Bogotá Jorge Tadeo Lozano. RESUMEN Con el objetivo de determinar la estructura en términos de abundancia, biomasa, composición y diversidad del ensamblaje zooplanctónico en la costa del Caribe norte colombiano y relacionarla con las condiciones del agua, se llevaron a cabo dos cruceros de investigación en las dos épocas climáticas típicas de la región (seca y lluviosa). Las estaciones fueron ubicadas en dos de las provincias fisicoquímicas determinadas en el Caribe colombiano; grupo 2: río Magdalena-CGSM (región 1) y grupo 6: PNN Tayrona-Guajira (región 2). Estos se realizaron sobre una grilla de 16 estaciones, donde se efectuaron arrastres circulares superficiales. Se encontraron 87 familias-morfotipos encontrándose la mayor riqueza de familias en la región 1 en la época seca, mientras que las mayores contribuciones en abundancias y biomasas se obtuvieron en época lluviosa en la región PNN Tayrona-Guajira. -
Tesis Doctoral Dinámica Del Microfitobentos Y Su
UNIVERSIDAD CENTRAL DE VENEZUELA FACULTAD DE CIENCIAS INSTITUTO DE ZOOLOGÍA Y ECOLOGÍA TROPICAL POSTGRADO EN ECOLOGÍA TESIS DOCTORAL DINÁMICA DEL MICROFITOBENTOS Y SU RELACIÓN ECOLÓGICA CON EL PLANCTON DE LA ZONA COSTERA CENTRAL DE VENEZUELA Presentada ante la ilustre Universidad Central de Venezuela por el M.Sc. Carlos Julio Pereira Ibarra, para optar al título de Doctor en Ciencias, mención Ecología TUTORA: Dra. Evelyn Zoppi De Roa CARACAS, ABRIL DE 2019 ii iii RESUMEN El microfitobentos es una comunidad que agrupa a los organismos fotosintéticos que colonizan el sustrato bentónico. Estas microalgas y cianobacterias tienen gran relevancia para los ecosistemas marinos y costeros, debido a su alta productividad y a que son una fuente de alimento importante para los organismos que habitan los fondos. En Venezuela, este grupo ha sido escasamente estudiado y se desconoce su interacción con otros organismos, por lo cual se planteó analizar la relación ecológica, composición, abundancia y variaciones espaciales y temporales del microfitobentos, el microfitoplancton, el meiobentos y el zooplancton con las condiciones ambientales de la zona costera ubicada entre Chirimena y Puerto Francés, estado Miranda. Los muestreos fueron realizados mensualmente desde junio de 2014 hasta marzo de 2015. Para la captura del fitoplancton y el zooplancton, se realizaron arrastres horizontales con redes cónicas. Las muestras bentónicas se obtuvieron con el uso de un muestreador cilíndrico. Adicionalmente, se realizó un muestreo especial para evaluar la diferenciación espacial del microfitobentos a escalas disímiles. La identificación y conteo de las microalgas y cianobacterias se realizó por el método de Utermölh y del zooplancton en una cámara de Bogorov. -
First Record of Blue-Pigmented Calanoid Copepod, Acrocalanus Sp. in the Whale Shark Habitat of Cendrawasih Bay, Papua
First record of blue-pigmented Calanoid Copepod, Acrocalanus sp. in the whale shark habitat of Cendrawasih Bay, Papua - Indonesia 1Diena Ardania, 2Yusli Wardiatno, 2Mohammad M. Kamal 1 Master Program in Aquatic Resources Management, Graduate School of Bogor Agricultural University, Jalan Raya Dramaga, Kampus IPB Dramaga, 16680 Dramaga, West Java, Indonesia; 2 Department of Aquatic Resources Management, Faculty of Fisheries and Marine Sciences, Bogor Agricultural University, Jalan Raya Dramaga, Kampus IPB Dramaga, 16680 Dramaga, West Java, Indonesia. Corresponding author: D. Ardania, [email protected] Abstract. Cendrawasih Bay is famous as a habitat of whale shark. One of the main foods of the whale shark in the bay is the blue-pigmented calanoid copepods. The presence of the blue-pigmented copepod has never been reported in Indonesia. This study was aimed to report the occurrence of a blue- pigmented calanoid copepod (Acrocalanus sp.) from Cendrawasih Bay, Papua as new record. The specimens were collected by means of bongo net, and preserved with 5% sea-buffered formaldeyide. Sample collection was conducted from October to December 2016. Morphological characters of the species are illustrated and described. This finding enhances marine biodiversity list of micro-crustacean in Indonesia, and add more distribution information of the species in the world. Key Words: blue-pigmented copepod, conservation, crustacea, new record, zooplankton. Introduction. Copepods are small aquatic crustaceans and their habitats range from freshwater to hyper saline condition. Copepod is an important link in the aquatic food chain especially for small fish to large fish like whale shark. Kamal et al (2016), Hacohen- Domene et al (2006) and Clark & Nelson (1997) reported that Copepoda was the dominant food of the whale shark (Rhincodon typus). -
(Gulf Watch Alaska) Final Report the Seward Line: Marine Ecosystem
Exxon Valdez Oil Spill Long-Term Monitoring Program (Gulf Watch Alaska) Final Report The Seward Line: Marine Ecosystem monitoring in the Northern Gulf of Alaska Exxon Valdez Oil Spill Trustee Council Project 16120114-J Final Report Russell R Hopcroft Seth Danielson Institute of Marine Science University of Alaska Fairbanks 905 N. Koyukuk Dr. Fairbanks, AK 99775-7220 Suzanne Strom Shannon Point Marine Center Western Washington University 1900 Shannon Point Road, Anacortes, WA 98221 Kathy Kuletz U.S. Fish and Wildlife Service 1011 East Tudor Road Anchorage, AK 99503 July 2018 The Exxon Valdez Oil Spill Trustee Council administers all programs and activities free from discrimination based on race, color, national origin, age, sex, religion, marital status, pregnancy, parenthood, or disability. The Council administers all programs and activities in compliance with Title VI of the Civil Rights Act of 1964, Section 504 of the Rehabilitation Act of 1973, Title II of the Americans with Disabilities Action of 1990, the Age Discrimination Act of 1975, and Title IX of the Education Amendments of 1972. If you believe you have been discriminated against in any program, activity, or facility, or if you desire further information, please write to: EVOS Trustee Council, 4230 University Dr., Ste. 220, Anchorage, Alaska 99508-4650, or [email protected], or O.E.O., U.S. Department of the Interior, Washington, D.C. 20240. Exxon Valdez Oil Spill Long-Term Monitoring Program (Gulf Watch Alaska) Final Report The Seward Line: Marine Ecosystem monitoring in the Northern Gulf of Alaska Exxon Valdez Oil Spill Trustee Council Project 16120114-J Final Report Russell R Hopcroft Seth L. -
Southeastern Regional Taxonomic Center South Carolina Department of Natural Resources
Southeastern Regional Taxonomic Center South Carolina Department of Natural Resources http://www.dnr.sc.gov/marine/sertc/ Southeastern Regional Taxonomic Center Invertebrate Literature Library (updated 9 May 2012, 4056 entries) (1958-1959). Proceedings of the salt marsh conference held at the Marine Institute of the University of Georgia, Apollo Island, Georgia March 25-28, 1958. Salt Marsh Conference, The Marine Institute, University of Georgia, Sapelo Island, Georgia, Marine Institute of the University of Georgia. (1975). Phylum Arthropoda: Crustacea, Amphipoda: Caprellidea. Light's Manual: Intertidal Invertebrates of the Central California Coast. R. I. Smith and J. T. Carlton, University of California Press. (1975). Phylum Arthropoda: Crustacea, Amphipoda: Gammaridea. Light's Manual: Intertidal Invertebrates of the Central California Coast. R. I. Smith and J. T. Carlton, University of California Press. (1981). Stomatopods. FAO species identification sheets for fishery purposes. Eastern Central Atlantic; fishing areas 34,47 (in part).Canada Funds-in Trust. Ottawa, Department of Fisheries and Oceans Canada, by arrangement with the Food and Agriculture Organization of the United Nations, vols. 1-7. W. Fischer, G. Bianchi and W. B. Scott. (1984). Taxonomic guide to the polychaetes of the northern Gulf of Mexico. Volume II. Final report to the Minerals Management Service. J. M. Uebelacker and P. G. Johnson. Mobile, AL, Barry A. Vittor & Associates, Inc. (1984). Taxonomic guide to the polychaetes of the northern Gulf of Mexico. Volume III. Final report to the Minerals Management Service. J. M. Uebelacker and P. G. Johnson. Mobile, AL, Barry A. Vittor & Associates, Inc. (1984). Taxonomic guide to the polychaetes of the northern Gulf of Mexico. -
Tesis Variabilidad Oceanográfica Espacialprog
Universidad de Concepción Dirección de Postgrado Facultad de Ciencias Naturales y Oceanográficas Programa de Doctorado en Oceanografía Variabilidad oceanográfica espacial y su impacto sobre la estructura comunitaria, filogeografía y biogeoquímica del zooplancton pelágico en el Pacífico Suroriental CAROLINA ANDREA GONZÁLEZ ESPINOZA CONCEPCIÓN-CHILE 2019 Profesor Guía: Rubén Escribano Veloso Profesor Co-guía: Pedro Victoriano Departamento de Oceanografía Facultad de Ciencias Naturales y Oceanográficas Universidad de Concepción Universidad de Concepción Dirección de Postgrado La Tesis de “Doctorado en Oceanografía” titulada “Variabilidad oceanográfica espacial y su impacto sobre la estructura comunitaria, filogeografía y biogeoquímica del zooplancton pelágico en el Pacífico Sur Oriental”, del Srta. CAROLINA GONZÁLEZ y realizada bajo la Facultad de Ciencias Naturales y Oceanográficas, Universidad de Concepción, ha sido aprobada por la siguiente Comisión de Evaluación: Dr. Rubén Escribano V. Profesor Guía Universidad de Concepción, Chile ____________________________ Dr. Pedro Victoriano S. Profesor Co-guía Universidad de Concepción, Chile ____________________________ Dr. Osvaldo Ulloa Miembro Comité de Tesis Universidad de Concepción, Chile ____________________________ Dra. Peter von Dassow Miembro Comité de Tesis Pontificia Universidad Católica, Chile ____________________________ Dr. Sylvain Faugeron Evaluador Externo ____________________________ Pontificia Universidad Católica, Chile Dra. Pamela Hidalgo Directora Programas de Postgrados -
Radium Isotopes As Tracers of Boundary Inputs of Nutrients and Trace Elements to the Coastal and Open Ocean by Lauren Elizabeth Kipp B.S
Radium isotopes as tracers of boundary inputs of nutrients and trace elements to the coastal and open ocean by Lauren Elizabeth Kipp B.S. Chemistry, University of North Carolina Wilmington, 2013 Submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy at the MASSACHUSETTS INSTITUTE OF TECHNOLOGY and the WOODS HOLE OCEANOGRAPHIC INSTITUTION September 2018 © 2018 Lauren Elizabeth Kipp. All rights reserved. The author hereby grants to MIT and WHOI permission to reproduce and to distribute publicly paper and electronic copies of this thesis document in whole or in part in any medium now known or hereafter created. Signature of Author ___________________________________________________________________________________________ Joint Program in Oceanography/Applied Ocean Science and Engineering Massachusetts Institute of Technology and Woods Hole Oceanographic Institution August 3, 2018 Certified by ___________________________________________________________________________________________ Dr. Matthew A. Charette Thesis supervisor Woods Hole Oceanographic Institution Accepted by ___________________________________________________________________________________________ Dr. Shuhei Ono Chair, Joint Committee for Chemical Oceanography Massachusetts Institute of Technology 2 Radium isotopes as tracers of boundary inputs of nutrients and trace elements to the coastal and open ocean by Lauren Elizabeth Kipp Submitted to the Massachusetts Institute of Technology and the Woods Hole Oceanographic Institution on August 3, 2018, in partial fulfillment of the requirements for the degree of Doctor of Philosophy in Chemical Oceanography. Abstract Nutrients and trace metals are vital for supporting life in the ocean, but the boundary processes that control the distributions of these elements are poorly constrained. Radium isotopes are well suited to studying inputs of elements from ocean margins because they are produced in sediments and soluble in seawater. -
Guide to the Coastal and Surface Zooplankton of the South-Western Indian Ocean
GUIDE TO THE COASTAL AND SURFACE ZOOPLANKTON OF THE SOUTH-WESTERN INDIAN OCEAN David VP Conway Rowena G White Joanna Hugues-Dit-Ciles Christopher P Gallienne David B Robins DEFRA Darwin Initiative Zooplankton Programme Version 1 June 2003 Marine Biological Association of the United Kingdom Occasional Publication No 15 GUIDE TO THE COASTAL AND SURFACE ZOOPLANKTON OF THE SOUTH-WESTERN INDIAN OCEAN David VP Conway Marine Biological Association Plymouth Rowena G White University of Wales Bangor Joanna Hugues-Dit-Ciles, Christopher P Gallienne and David B Robins Plymouth Marine Laboratory UK-DEFRA Darwin Initiative Project 162/09/004 Zooplankton of the Mascarene Plateau Version 1 June 2003 Marine Biological Association of the United Kingdom Occasional Publication No 15 General disclaimer The authors, the Marine Biological Association and the Plymouth Marine Laboratory do not guarantee that this publication is without flaw of any kind and disclaims all liability for any error, loss, or other consequence which may arise from you relying on any information in this publication. Citation Conway, D.V.P., White, R.G., Hugues-Dit-Ciles, J., Gallienne, C.P., Robins, D.B. (2003). Guide to the coastal and surface zooplankton of the south-western Indian Ocean, Occasional Publication of the Marine Biological Association of the United Kingdom, No 15, Plymouth, UK. Electronic copies This guide is available for download, without charge, from the Plymouth Marine Laboratory Website at http://www.pml.ac.uk/sharing/zooplankton.htm. © 2003 by the Marine Biological Association of the United Kingdom and the Plymouth Marine Laboratory, Plymouth, UK. No part of this publication may be reproduced in any form without permission of the authors.