Lichen Functional Trait Variation Along an East-West Climatic Gradient in Oregon and Among Habitats in Katmai National Park, Alaska

Total Page:16

File Type:pdf, Size:1020Kb

Lichen Functional Trait Variation Along an East-West Climatic Gradient in Oregon and Among Habitats in Katmai National Park, Alaska AN ABSTRACT OF THE THESIS OF Kaleigh Spickerman for the degree of Master of Science in Botany and Plant Pathology presented on June 11, 2015 Title: Lichen Functional Trait Variation Along an East-West Climatic Gradient in Oregon and Among Habitats in Katmai National Park, Alaska Abstract approved: ______________________________________________________ Bruce McCune Functional traits of vascular plants have been an important component of ecological studies for a number of years; however, in more recent times vascular plant ecologists have begun to formalize a set of key traits and universal system of trait measurement. Many recent studies hypothesize global generality of trait patterns, which would allow for comparison among ecosystems and biomes and provide a foundation for general rules and theories, the so-called “Holy Grail” of ecology. However, the majority of these studies focus on functional trait patterns of vascular plants, with a minority examining the patterns of cryptograms such as lichens. Lichens are an important component of many ecosystems due to their contributions to biodiversity and their key ecosystem services, such as contributions to mineral and hydrological cycles and ecosystem food webs. Lichens are also of special interest because of their reliance on atmospheric deposition for nutrients and water, which makes them particularly sensitive to air pollution. Therefore, they are often used as bioindicators of air pollution, climate change, and general ecosystem health. This thesis examines the functional trait patterns of lichens in two contrasting regions with fundamentally different kinds of data. To better understand the patterns of lichen functional traits, we examined reproductive, morphological, and chemical trait variation along precipitation and temperature gradients in Oregon. Specifically, we measured traits of 102 macrolichen species collected from 166 USDA Forest Service program for Forest Inventory and Analysis (FIA) plots. These plots were located in a more-or-less continuous swath across Oregon between 43°W and 45°W. Plots were grouped into seven regions (the Oregon Coast, Coast Range, Willamette Valley, Western Cascades, High Cascades, Eastern Cascades, and Eastern Oregon). Using multivariate analysis techniques we found strong linear and nonlinear trait patterns along precipitation and temperature gradients, and were able to characterize the seven main regions of Oregon by the relative abundance of lichen traits. The literature on what lichen traits are most common in which habitats is sparse and anecdotal; understanding trait-habitat patterns could have management implications due to lichen importance as bioindicators and animal forage. Understanding how key traits are distributed among habitats could provide insight into potential air pollution impacts on certain habitats, animal movement among habitats, etc. To examine trait-habitat patterns, we measured the reproductive, morphological, and chemical traits of 429 lichen species collected haphazardly (without a formal sampling framework) from ten distinct habitats within Katmai National Park in southwest Alaska as part of a taxonomic inventory. Using multivariate analysis techniques we grouped habitats based on the expression of lichen traits and described the relative abundance of each trait in different habitats. The second goal of this study was to examine the potential usefulness of herbarium collections in ecological studies of this type. Herbarium specimens are a large potential resource that is generally unused in ecological studies due to concerns over potential bias and noise introduced by variation in collection methods. However, recent work has suggested that herbarium specimens may yield more useful results than previously thought and could be a valid resource for ecological studies. The data for our study were collected in a haphazard manner for a floristic inventory, similar to the collection methods used for many herbarium specimens. The patterns that we observed indicates that herbarium specimens may be a good resource for future research. ©Copyright by Kaleigh Spickerman June 11, 2015 All Rights Reserved Lichen Functional Trait Variation Along an East-West Climatic Gradient in Oregon and Among Habitats in Katmai National Park, Alaska by Kaleigh Spickerman A THESIS submitted to Oregon State University in partial fulfillment of the requirements for the degree of Master of Science Presented June 11, 2015 Commencement June 2016 Master of Science thesis of Kaleigh Spickerman presented on June 11, 2015 APPROVED: Major Professor, representing Botany and Plant Pathology Head of the Department of Botany and Plant Pathology Dean of the Graduate School I understand that my thesis will become part of the permanent collection of Oregon State University libraries. My signature below authorizes release of my thesis to any reader upon request. Kaleigh Spickerman, Author ACKNOWLEDGEMENTS First and foremost, thanks goes to the National Park Service for funding this project and for giving me the opportunity to conduct research in Katmai National Park, a truly remarkable place. I would like to thank my major professor Bruce McCune for his humor and guidance throughout this journey, as well as his seemingly endless enthusiasm for sharing his wealth of knowledge. I would also like to thank my committee members Andy Jones and Sarah Jovan for comments and guidance along the way. Throughout this project I have been fortunate enough to work with and learn from some truly talented lichenologists, including Lucia Muggia, Peter Nelson, Tor Tønsberg, all of whom helped with the data collection for Chapter 3. The US Forest Service Forest Inventory and Analysis Program (particularly Sarah Jovan), OSU’s Department of Botany and Plant Pathology, and James Walton of the National Park Service Southwest Alaska Network have also been wonderful resources. I would also like to thank Elisa Alphandary for collecting data on chemical traits and compiling an extensive chemical trait database. Special thanks goes to Pat Muir who immediately made me feel at home here in Oregon. I would also like to thank the entire McCune lab group, especially Nijmah Ali, for their support and for giving me a home away from home in the lab. You have all been a pleasure to work with and I hope we have the opportunity to work together again. Thanks goes to John Mark Maze for all of his support and for keeping me well fed and sane during this journey. Lastly, I would like to thank the friends and family who have been a constant source of support and encouragement over the last two years, I would not be where I am today without each and every one of you. CONTRIBUTION OF AUTHORS Dr. Bruce McCune assisted with the study design, data interpretation, and synthesis for both chapters of this thesis. Portions of the data used in Chapter 2 were originally published in 2007 by Dr. Linda Geiser and Dr. Peter Neitlich, and in 2015 by Dr. Heather Root, Dr. Linda Geiser, Dr. Sarah Jovan, and Dr. Peter Neitlich. Dr. Bruce McCune, Dr. Lucia Muggia, Dr. Peter Nelson, Dr. Tor Tønsberg, and James Walton assisted with data collection for Chapter 3. Elisa Alphandary compiled the chemical traits used in both Chapters 2 and 3. TABLE OF CONTENTS Page Chapter 1: Introduction ................................................................................................................... 1 References ................................................................................................................................... 4 Chapter 2: Lichen functional trait variation along environmental gradients in Oregon ................. 8 1. Introduction ............................................................................................................................. 8 2. Methods................................................................................................................................. 15 2.1. Study Area and Sampling Procedures ............................................................................ 15 2.2. Trait Measurements ....................................................................................................... 19 2.3. Data Preparation and Analysis ....................................................................................... 21 3. Results ................................................................................................................................... 23 3.1. Climatic variation: ......................................................................................................... 25 3.2. Lichen communities: ...................................................................................................... 32 3.3. Lichen traits: .................................................................................................................. 37 4. DISCUSSION: ...................................................................................................................... 43 4.1. Dispersal and establishment ........................................................................................... 43 4.2. Resource acquisition ...................................................................................................... 43 4.3. Competition.................................................................................................................... 44 4.4. Stress (UV light) ............................................................................................................ 46 4.5. Disturbance (herbivory)
Recommended publications
  • Supplementary Material for Nelson, P. R., B. Mccune & D. K. Swanson
    Supplementary material for Nelson, P. R., B. McCune & D. K. Swanson. 2015. Lichen traits and species as indicators of vegetation and environment. The Bryologist 118(3): XX–XX. Supplementary Table S2. Trait matrix (alphabetical by species). “1” indicates a species possesses that trait. cladoniiform Filamentous Squamulose Cyano Erect Appressed 3D s branched Tripartite Fruticose Terricole Epiphyte Lignicole Saxicole p soredia lobules Foliose Simple foliose Green rawlin isida foliose Lichen Species Subspecies richly Only g Alectoria ochroleuca 1 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 0 Allantoparmelia almquistii 1 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 Allantoparmelia alpicola 1 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 Allocetraria madreporiformis 1 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 Anaptychia bryorum 1 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 0 0 Arctoparmelia centrifuga 1 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 Arctoparmelia incurva 1 0 0 1 0 0 0 1 0 0 0 0 1 0 0 1 0 0 Arctoparmelia separata 1 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 Arctoparmelia subcentrifuga 1 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 Asahinea chrysantha 1 0 0 1 0 0 0 1 0 0 0 0 0 0 1 0 0 0 Baeomyces carneus 1 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 Baeomyces placophyllus 1 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 Baeomyces rufus 1 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 Blennothallia crispa 0 1 0 0 1 0 0 1 0 0 0 0 0 0 1 0 1 0 Brodoa oroarctica 1 0 0 1 0 0 0 1 0 0 0 0 0 0 1 0 0 0 Bryocaulon divergens 1 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 0 Bryoria capillaris 1 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 0 Bryoria chalybeiformis 1 0 0 0 0 1 0 0 1 0 0 0 0
    [Show full text]
  • Phylogeny of the Cetrarioid Core (Parmeliaceae) Based on Five
    The Lichenologist 41(5): 489–511 (2009) © 2009 British Lichen Society doi:10.1017/S0024282909990090 Printed in the United Kingdom Phylogeny of the cetrarioid core (Parmeliaceae) based on five genetic markers Arne THELL, Filip HÖGNABBA, John A. ELIX, Tassilo FEUERER, Ingvar KÄRNEFELT, Leena MYLLYS, Tiina RANDLANE, Andres SAAG, Soili STENROOS, Teuvo AHTI and Mark R. D. SEAWARD Abstract: Fourteen genera belong to a monophyletic core of cetrarioid lichens, Ahtiana, Allocetraria, Arctocetraria, Cetraria, Cetrariella, Cetreliopsis, Flavocetraria, Kaernefeltia, Masonhalea, Nephromopsis, Tuckermanella, Tuckermannopsis, Usnocetraria and Vulpicida. A total of 71 samples representing 65 species (of 90 worldwide) and all type species of the genera are included in phylogentic analyses based on a complete ITS matrix and incomplete sets of group I intron, -tubulin, GAPDH and mtSSU sequences. Eleven of the species included in the study are analysed phylogenetically for the first time, and of the 178 sequences, 67 are newly constructed. Two phylogenetic trees, one based solely on the complete ITS-matrix and a second based on total information, are similar, but not entirely identical. About half of the species are gathered in a strongly supported clade composed of the genera Allocetraria, Cetraria s. str., Cetrariella and Vulpicida. Arctocetraria, Cetreliopsis, Kaernefeltia and Tuckermanella are monophyletic genera, whereas Cetraria, Flavocetraria and Tuckermannopsis are polyphyletic. The taxonomy in current use is compared with the phylogenetic results, and future, probable or potential adjustments to the phylogeny are discussed. The single non-DNA character with a strong correlation to phylogeny based on DNA-sequences is conidial shape. The secondary chemistry of the poorly known species Cetraria annae is analyzed for the first time; the cortex contains usnic acid and atranorin, whereas isonephrosterinic, nephrosterinic, lichesterinic, protolichesterinic and squamatic acids occur in the medulla.
    [Show full text]
  • A New Species of Aspicilia (Megasporaceae), with a New Lichenicolous Sagediopsis (Adelococcaceae), from the Falkland Islands
    The Lichenologist (2021), 53, 307–315 doi:10.1017/S0024282921000244 Standard Paper A new species of Aspicilia (Megasporaceae), with a new lichenicolous Sagediopsis (Adelococcaceae), from the Falkland Islands Alan M. Fryday1 , Timothy B. Wheeler2 and Javier Etayo3 1Department of Plant Biology, Michigan State University, East Lansing, Michigan 48824, USA; 2Division of Biological Sciences, University of Montana, Missoula, Montana 59801, USA and 3Navarro Villoslada 16, 3° dcha., 31003 Pamplona, Navarra, Spain Abstract The new species Aspicilia malvinae is described from the Falkland Islands. It is the first species of Megasporaceae to be discovered on the islands and only the seventh to be reported from South America. It is distinguished from other species of Aspicilia by the unusual secondary metabolite chemistry (hypostictic acid) and molecular sequence data. The collections of the new species support two lichenicolous fungi: Endococcus propinquus s. lat., which is new to the Falkland Islands, and a new species of Sagediopsis with small perithecia and 3-septate ascospores c. 18–20 × 4–5 μm, which is described here as S. epimalvinae. A total of 60 new DNA sequences obtained from species of Megasporaceae (mostly Aspicilia) are also introduced. Key words: DNA sequences, Endococcus, Lecanora masafuerensis, lichen, southern South America, southern subpolar region (Accepted 18 March 2021) Introduction Materials and Methods Species of Megasporaceae Lumbsch et al. are surprisingly scarce Morphological methods in the Southern Hemisphere. Whereas 97 species are known Gross morphology was examined under a dissecting microscope from North America (Esslinger 2019), 104 from Russia and apothecial characteristics by light microscopy (compound (Urbanavichus 2010), 40 from Svalbard (Øvstedal et al.
    [Show full text]
  • Opuscula Philolichenum, 6: 1-XXXX
    Opuscula Philolichenum, 15: 56-81. 2016. *pdf effectively published online 25July2016 via (http://sweetgum.nybg.org/philolichenum/) Lichens, lichenicolous fungi, and allied fungi of Pipestone National Monument, Minnesota, U.S.A., revisited M.K. ADVAITA, CALEB A. MORSE1,2 AND DOUGLAS LADD3 ABSTRACT. – A total of 154 lichens, four lichenicolous fungi, and one allied fungus were collected by the authors from 2004 to 2015 from Pipestone National Monument (PNM), in Pipestone County, on the Prairie Coteau of southwestern Minnesota. Twelve additional species collected by previous researchers, but not found by the authors, bring the total number of taxa known for PNM to 171. This represents a substantial increase over previous reports for PNM, likely due to increased intensity of field work, and also to the marked expansion of corticolous and anthropogenic substrates since the site was first surveyed in 1899. Reexamination of 116 vouchers deposited in MIN and the PNM herbarium led to the exclusion of 48 species previously reported from the site. Crustose lichens are the most common growth form, comprising 65% of the lichen diversity. Sioux Quartzite provided substrate for 43% of the lichen taxa collected. Saxicolous lichen communities were characterized by sampling four transects on cliff faces and low outcrops. An annotated checklist of the lichens of the site is provided, as well as a list of excluded taxa. We report 24 species (including 22 lichens and two lichenicolous fungi) new for Minnesota: Acarospora boulderensis, A. contigua, A. erythrophora, A. strigata, Agonimia opuntiella, Arthonia clemens, A. muscigena, Aspicilia americana, Bacidina delicata, Buellia tyrolensis, Caloplaca flavocitrina, C. lobulata, C.
    [Show full text]
  • New Records of Crustose Teloschistaceae (Lichens, Ascomycota) from the Murmansk Region of Russia
    vol. 37, no. 3, pp. 421–434, 2016 doi: 10.1515/popore-2016-0022 New records of crustose Teloschistaceae (lichens, Ascomycota) from the Murmansk region of Russia Ivan FROLOV1* and Liudmila KONOREVA2,3 1 Department of Botany, Faculty of Science, University of South Bohemia, Branišovská 31, České Budějovice, CZ-37005, Czech Republic 2 Laboratory of Flora and Vegetations, The Polar-Alpine Botanical Garden and Institute KSC RAS, Kirovsk, Murmansk region, 184209, Russia 3 Laboratory of Lichenology and Bryology, Komarov Botanical Institute RAS, Professor Popov St. 2, St. Petersburg, 197376, Russia * corresponding author <[email protected]> Abstract: Twenty-three species of crustose Teloschistaceae were collected from the northwest of the Murmansk region of Russia during field trips in 2013 and 2015. Blas- tenia scabrosa is a new combination supported by molecular data. Blastenia scabrosa, Caloplaca fuscorufa and Flavoplaca havaasii are new to Russia. Blastenia scabrosa is also new to the Caucasus Mts and Sweden. Detailed morphological measurements of the Russian specimens of these species are provided. Caloplaca exsecuta, C. grimmiae and C. sorocarpa are new to the Murmansk region. The taxonomic position of C. alcarum is briefly discussed. Key words: Arctic, Rybachy Peninsula, Caloplaca s. lat., Blastenia scabrosa. Introduction Although the Murmansk region is one of the best studied regions of Russia in terms of lichen diversity, there are numerous reports in recent literature of new discoveries there (e.g. Fadeeva et al. 2013; Konoreva 2015; Melechin 2015; Urbanavichus 2015). Several localities in the northwest of the Murmansk region, mainly on the Pechenga Tundra Mountains and the Rybachy Peninsula, were visited in 2013 and 2015.
    [Show full text]
  • One Hundred New Species of Lichenized Fungi: a Signature of Undiscovered Global Diversity
    Phytotaxa 18: 1–127 (2011) ISSN 1179-3155 (print edition) www.mapress.com/phytotaxa/ Monograph PHYTOTAXA Copyright © 2011 Magnolia Press ISSN 1179-3163 (online edition) PHYTOTAXA 18 One hundred new species of lichenized fungi: a signature of undiscovered global diversity H. THORSTEN LUMBSCH1*, TEUVO AHTI2, SUSANNE ALTERMANN3, GUILLERMO AMO DE PAZ4, ANDRÉ APTROOT5, ULF ARUP6, ALEJANDRINA BÁRCENAS PEÑA7, PAULINA A. BAWINGAN8, MICHEL N. BENATTI9, LUISA BETANCOURT10, CURTIS R. BJÖRK11, KANSRI BOONPRAGOB12, MAARTEN BRAND13, FRANK BUNGARTZ14, MARCELA E. S. CÁCERES15, MEHTMET CANDAN16, JOSÉ LUIS CHAVES17, PHILIPPE CLERC18, RALPH COMMON19, BRIAN J. COPPINS20, ANA CRESPO4, MANUELA DAL-FORNO21, PRADEEP K. DIVAKAR4, MELIZAR V. DUYA22, JOHN A. ELIX23, ARVE ELVEBAKK24, JOHNATHON D. FANKHAUSER25, EDIT FARKAS26, LIDIA ITATÍ FERRARO27, EBERHARD FISCHER28, DAVID J. GALLOWAY29, ESTER GAYA30, MIREIA GIRALT31, TREVOR GOWARD32, MARTIN GRUBE33, JOSEF HAFELLNER33, JESÚS E. HERNÁNDEZ M.34, MARÍA DE LOS ANGELES HERRERA CAMPOS7, KLAUS KALB35, INGVAR KÄRNEFELT6, GINTARAS KANTVILAS36, DOROTHEE KILLMANN28, PAUL KIRIKA37, KERRY KNUDSEN38, HARALD KOMPOSCH39, SERGEY KONDRATYUK40, JAMES D. LAWREY21, ARMIN MANGOLD41, MARCELO P. MARCELLI9, BRUCE MCCUNE42, MARIA INES MESSUTI43, ANDREA MICHLIG27, RICARDO MIRANDA GONZÁLEZ7, BIBIANA MONCADA10, ALIFERETI NAIKATINI44, MATTHEW P. NELSEN1, 45, DAG O. ØVSTEDAL46, ZDENEK PALICE47, KHWANRUAN PAPONG48, SITTIPORN PARNMEN12, SERGIO PÉREZ-ORTEGA4, CHRISTIAN PRINTZEN49, VÍCTOR J. RICO4, EIMY RIVAS PLATA1, 50, JAVIER ROBAYO51, DANIA ROSABAL52, ULRIKE RUPRECHT53, NORIS SALAZAR ALLEN54, LEOPOLDO SANCHO4, LUCIANA SANTOS DE JESUS15, TAMIRES SANTOS VIEIRA15, MATTHIAS SCHULTZ55, MARK R. D. SEAWARD56, EMMANUËL SÉRUSIAUX57, IMKE SCHMITT58, HARRIE J. M. SIPMAN59, MOHAMMAD SOHRABI 2, 60, ULRIK SØCHTING61, MAJBRIT ZEUTHEN SØGAARD61, LAURENS B. SPARRIUS62, ADRIANO SPIELMANN63, TOBY SPRIBILLE33, JUTARAT SUTJARITTURAKAN64, ACHRA THAMMATHAWORN65, ARNE THELL6, GÖRAN THOR66, HOLGER THÜS67, EINAR TIMDAL68, CAMILLE TRUONG18, ROMAN TÜRK69, LOENGRIN UMAÑA TENORIO17, DALIP K.
    [Show full text]
  • Lichens and Associated Fungi from Glacier Bay National Park, Alaska
    The Lichenologist (2020), 52,61–181 doi:10.1017/S0024282920000079 Standard Paper Lichens and associated fungi from Glacier Bay National Park, Alaska Toby Spribille1,2,3 , Alan M. Fryday4 , Sergio Pérez-Ortega5 , Måns Svensson6, Tor Tønsberg7, Stefan Ekman6 , Håkon Holien8,9, Philipp Resl10 , Kevin Schneider11, Edith Stabentheiner2, Holger Thüs12,13 , Jan Vondrák14,15 and Lewis Sharman16 1Department of Biological Sciences, CW405, University of Alberta, Edmonton, Alberta T6G 2R3, Canada; 2Department of Plant Sciences, Institute of Biology, University of Graz, NAWI Graz, Holteigasse 6, 8010 Graz, Austria; 3Division of Biological Sciences, University of Montana, 32 Campus Drive, Missoula, Montana 59812, USA; 4Herbarium, Department of Plant Biology, Michigan State University, East Lansing, Michigan 48824, USA; 5Real Jardín Botánico (CSIC), Departamento de Micología, Calle Claudio Moyano 1, E-28014 Madrid, Spain; 6Museum of Evolution, Uppsala University, Norbyvägen 16, SE-75236 Uppsala, Sweden; 7Department of Natural History, University Museum of Bergen Allégt. 41, P.O. Box 7800, N-5020 Bergen, Norway; 8Faculty of Bioscience and Aquaculture, Nord University, Box 2501, NO-7729 Steinkjer, Norway; 9NTNU University Museum, Norwegian University of Science and Technology, NO-7491 Trondheim, Norway; 10Faculty of Biology, Department I, Systematic Botany and Mycology, University of Munich (LMU), Menzinger Straße 67, 80638 München, Germany; 11Institute of Biodiversity, Animal Health and Comparative Medicine, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow G12 8QQ, UK; 12Botany Department, State Museum of Natural History Stuttgart, Rosenstein 1, 70191 Stuttgart, Germany; 13Natural History Museum, Cromwell Road, London SW7 5BD, UK; 14Institute of Botany of the Czech Academy of Sciences, Zámek 1, 252 43 Průhonice, Czech Republic; 15Department of Botany, Faculty of Science, University of South Bohemia, Branišovská 1760, CZ-370 05 České Budějovice, Czech Republic and 16Glacier Bay National Park & Preserve, P.O.
    [Show full text]
  • Taxonomy of Bryoria Section Implexae (Parmeliaceae, Lecanoromycetes) in North America and Europe, Based on Chemical, Morphological and Molecular Data
    Ann. Bot. Fennici 51: 345–371 ISSN 0003-3847 (print) ISSN 1797-2442 (online) Helsinki 22 September 2014 © Finnish Zoological and Botanical Publishing Board 2014 Taxonomy of Bryoria section Implexae (Parmeliaceae, Lecanoromycetes) in North America and Europe, based on chemical, morphological and molecular data Saara Velmala1,*, Leena Myllys1, Trevor Goward2, Håkon Holien3 & Pekka Halonen4 1) Botanical Museum, Finnish Museum of Natural History, P.O. Box 7, FI-00014 University of Helsinki, Finland (*corresponding author’s e-mail: [email protected]) 2) UBC Herbarium, Beaty Museum, University of British Columbia, Vancouver, BC V6T 1Z4, Canada (mailing address: Enlichened Consulting Ltd., 5369 Clearwater Valley Road, Upper Clearwater, BC V0E 1N1, Canada) 3) Nord-Trøndelag University College, Serviceboks 2501, N-7729 Steinkjer, Norway 4) Botanical Museum, Department of Biology, P.O. Box 3000, FI-90014 University of Oulu, Finland Received 31 Jan. 2014, final version received 13 June 2014, accepted 18 June 2014 Velmala, S., Myllys, L., Goward, T., Holien, H. & Halonen, P. 2014: Taxonomy of Bryoria section Implexae (Parmeliaceae, Lecanoromycetes) in North America and Europe, based on chemical, morphological and molecular data. — Ann. Bot. Fennici 51: 345–371. Ninety-seven ingroup specimens of Bryoria section Implexae (Parmeliaceae, Leca- noromycetes) were studied using molecular, chemical, morphological and geographic characters. The molecular data included nuclear ribosomal markers (ITS, IGS) and the partial glyceraldehyde-3-phosphate dehydrogenase (GAPDH) gene. In addition to par- simony analyses, a haplotype network was constructed. Phylogenetic analyses strongly supported the monophyly of the section Implexae. The specimens were grouped into two monophyletic clades. Clade 1 encompassed all esorediate material from North America, whereas Clade 2 included both sorediate North American material and all European material.
    [Show full text]
  • Lichens and Allied Fungi of the Indiana Forest Alliance
    2017. Proceedings of the Indiana Academy of Science 126(2):129–152 LICHENS AND ALLIED FUNGI OF THE INDIANA FOREST ALLIANCE ECOBLITZ AREA, BROWN AND MONROE COUNTIES, INDIANA INCORPORATED INTO A REVISED CHECKLIST FOR THE STATE OF INDIANA James C. Lendemer: Institute of Systematic Botany, The New York Botanical Garden, Bronx, NY 10458-5126 USA ABSTRACT. Based upon voucher collections, 108 lichen species are reported from the Indiana Forest Alliance Ecoblitz area, a 900 acre unit in Morgan-Monroe and Yellowwood State Forests, Brown and Monroe Counties, Indiana. The lichen biota of the study area was characterized as: i) dominated by species with green coccoid photobionts (80% of taxa); ii) comprised of 49% species that reproduce primarily with lichenized diaspores vs. 44% that reproduce primarily through sexual ascospores; iii) comprised of 65% crustose taxa, 29% foliose taxa, and 6% fruticose taxa; iv) one wherein many species are rare (e.g., 55% of species were collected fewer than three times) and fruticose lichens other than Cladonia were entirely absent; and v) one wherein cyanolichens were poorly represented, comprising only three species. Taxonomic diversity ranged from 21 to 56 species per site, with the lowest diversity sites concentrated in riparian corridors and the highest diversity sites on ridges. Low Gap Nature Preserve, located within the study area, was found to have comparable species richness to areas outside the nature preserve, although many species rare in the study area were found only outside preserve boundaries. Sets of rare species are delimited and discussed, as are observations as to the overall low abundance of lichens on corticolous substrates and the presence of many unhealthy foliose lichens on mature tree boles.
    [Show full text]
  • <I> Lecanoromycetes</I> of Lichenicolous Fungi Associated With
    Persoonia 39, 2017: 91–117 ISSN (Online) 1878-9080 www.ingentaconnect.com/content/nhn/pimj RESEARCH ARTICLE https://doi.org/10.3767/persoonia.2017.39.05 Phylogenetic placement within Lecanoromycetes of lichenicolous fungi associated with Cladonia and some other genera R. Pino-Bodas1,2, M.P. Zhurbenko3, S. Stenroos1 Key words Abstract Though most of the lichenicolous fungi belong to the Ascomycetes, their phylogenetic placement based on molecular data is lacking for numerous species. In this study the phylogenetic placement of 19 species of cladoniicolous species lichenicolous fungi was determined using four loci (LSU rDNA, SSU rDNA, ITS rDNA and mtSSU). The phylogenetic Pilocarpaceae analyses revealed that the studied lichenicolous fungi are widespread across the phylogeny of Lecanoromycetes. Protothelenellaceae One species is placed in Acarosporales, Sarcogyne sphaerospora; five species in Dactylosporaceae, Dactylo­ Scutula cladoniicola spora ahtii, D. deminuta, D. glaucoides, D. parasitica and Dactylospora sp.; four species belong to Lecanorales, Stictidaceae Lichenosticta alcicorniaria, Epicladonia simplex, E. stenospora and Scutula epiblastematica. The genus Epicladonia Stictis cladoniae is polyphyletic and the type E. sandstedei belongs to Leotiomycetes. Phaeopyxis punctum and Bachmanniomyces uncialicola form a well supported clade in the Ostropomycetidae. Epigloea soleiformis is related to Arthrorhaphis and Anzina. Four species are placed in Ostropales, Corticifraga peltigerae, Cryptodiscus epicladonia, C. galaninae and C. cladoniicola
    [Show full text]
  • Opuscula Philolichenum, 6: 87-120. 2009
    Opuscula Philolichenum, 6: 87–120. 2009. Lichenicolous fungi and some lichens from the Holarctic 1 MIKHAIL P. ZHURBENKO ABSTRACT. – 102 species of lichenicolous fungi and 23 lichens are reported, mainly from the Russian Arctic. Four new taxa are described: Clypeococcum bisporum (on Cetraria and Flavocetraria), Echinodiscus kozhevnikovii (on Cetraria), Stigmidium hafellneri (on Flavocetraria) and Gypsoplaca macrophylla f. blastidiata. The following lichenicolous fungi are reported for the first time from North America: Monodictys fuliginosa, Stigmidium microcarpum and Trichosphaeria lichenum. The following lichenicolous fungi and lichens are reported as new to Asia: Arthonia almquistii, Arthophacopsis parmeliarum, Cercidospora lobothalliae, Clypeococcum placopsiphilum, Dactylospora cf. aeruginosa, D. frigida, Epicladonia sandstedei, Everniicola flexispora, Hypogymnia fistulosa, Lecanora luteovernalis, Lecanographa rinodinae, Lichenochora mediterraneae, Lichenopeltella peltigericola, Lichenopuccinia poeltii, Lichenosticta alcicornaria, Phoma cytospora, Polycoccum ventosicola, Roselliniopsis gelidaria, R. ventosa, Sclerococcum gelidarum, Scoliciosporum intrusum, Stigmidium croceae, S. mycobilimbiae, S. stygnospilum, S. superpositum, Taeniolella diederichiana, Thelocarpon impressellum and Zwackhiomyces macrosporus. Twenty-eight species are new to Russia, 15 new to the Arctic, five new to Mongolia and nine new to Alaska. Twenty lichen genera and 31 species are new hosts for various species of lichenicolous fungi. INTRODUCTION This paper deals
    [Show full text]
  • Kenai National Wildlife Refuge Species List, Version 2018-07-24
    Kenai National Wildlife Refuge Species List, version 2018-07-24 Kenai National Wildlife Refuge biology staff July 24, 2018 2 Cover image: map of 16,213 georeferenced occurrence records included in the checklist. Contents Contents 3 Introduction 5 Purpose............................................................ 5 About the list......................................................... 5 Acknowledgments....................................................... 5 Native species 7 Vertebrates .......................................................... 7 Invertebrates ......................................................... 55 Vascular Plants........................................................ 91 Bryophytes ..........................................................164 Other Plants .........................................................171 Chromista...........................................................171 Fungi .............................................................173 Protozoans ..........................................................186 Non-native species 187 Vertebrates ..........................................................187 Invertebrates .........................................................187 Vascular Plants........................................................190 Extirpated species 207 Vertebrates ..........................................................207 Vascular Plants........................................................207 Change log 211 References 213 Index 215 3 Introduction Purpose to avoid implying
    [Show full text]