One Hundred New Species of Lichenized Fungi: a Signature of Undiscovered Global Diversity
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
Phylogeny of the Cetrarioid Core (Parmeliaceae) Based on Five
The Lichenologist 41(5): 489–511 (2009) © 2009 British Lichen Society doi:10.1017/S0024282909990090 Printed in the United Kingdom Phylogeny of the cetrarioid core (Parmeliaceae) based on five genetic markers Arne THELL, Filip HÖGNABBA, John A. ELIX, Tassilo FEUERER, Ingvar KÄRNEFELT, Leena MYLLYS, Tiina RANDLANE, Andres SAAG, Soili STENROOS, Teuvo AHTI and Mark R. D. SEAWARD Abstract: Fourteen genera belong to a monophyletic core of cetrarioid lichens, Ahtiana, Allocetraria, Arctocetraria, Cetraria, Cetrariella, Cetreliopsis, Flavocetraria, Kaernefeltia, Masonhalea, Nephromopsis, Tuckermanella, Tuckermannopsis, Usnocetraria and Vulpicida. A total of 71 samples representing 65 species (of 90 worldwide) and all type species of the genera are included in phylogentic analyses based on a complete ITS matrix and incomplete sets of group I intron, -tubulin, GAPDH and mtSSU sequences. Eleven of the species included in the study are analysed phylogenetically for the first time, and of the 178 sequences, 67 are newly constructed. Two phylogenetic trees, one based solely on the complete ITS-matrix and a second based on total information, are similar, but not entirely identical. About half of the species are gathered in a strongly supported clade composed of the genera Allocetraria, Cetraria s. str., Cetrariella and Vulpicida. Arctocetraria, Cetreliopsis, Kaernefeltia and Tuckermanella are monophyletic genera, whereas Cetraria, Flavocetraria and Tuckermannopsis are polyphyletic. The taxonomy in current use is compared with the phylogenetic results, and future, probable or potential adjustments to the phylogeny are discussed. The single non-DNA character with a strong correlation to phylogeny based on DNA-sequences is conidial shape. The secondary chemistry of the poorly known species Cetraria annae is analyzed for the first time; the cortex contains usnic acid and atranorin, whereas isonephrosterinic, nephrosterinic, lichesterinic, protolichesterinic and squamatic acids occur in the medulla. -
Cryptic Species and Species Pairs in Lichens: a Discussion on the Relationship Between Molecular Phylogenies and Morphological Characters
cryptic species:07-Cryptic_species 10/12/2009 13:19 Página 71 Anales del Jardín Botánico de Madrid Vol. 66S1: 71-81, 2009 ISSN: 0211-1322 doi: 10.3989/ajbm.2225 Cryptic species and species pairs in lichens: A discussion on the relationship between molecular phylogenies and morphological characters by Ana Crespo & Sergio Pérez-Ortega Departamento de Biología Vegetal II, Facultad de Farmacia, Universidad Complutense de Madrid, E-28040 Madrid, Spain [email protected], [email protected] Abstract Resumen Crespo, A. & Pérez-Ortega, S. 2009. Cryptic species and species Crespo, A. & Pérez-Ortega, S. 2009. Especies crípticas y pares de pairs in lichens: A discussion on the relationship between mole- especies en líquenes: una discusión sobre la relación entre la fi- cular phylogenies and morphological characters. Anales Jard. logenia molecular y los caracteres morfológicos. Anales Jard. Bot. Madrid 66S1: 71-81. Bot. Madrid 66S1: 71-81 (en inglés). As with most disciplines in biology, molecular genetics has re- Como en otras disciplinas, el impacto producido por la filogenia volutionized our understanding of lichenized fungi. Nowhere molecular en el conocimiento de los hongos liquenizados ha has this been more true than in systematics, especially in the de- producido avances y cambios conceptuales importantes. Esto limitation of species. In many cases, molecular research has ve- ha sido especialmente cierto en la sistemática y ha afectado de rified long-standing hypotheses, but in others, results appear to una manera muy notable en aspectos -
Patellariaceae Revisited
Mycosphere 6 (3): 290–326(2015) ISSN 2077 7019 www.mycosphere.org Article Mycosphere Copyright © 2015 Online Edition Doi 10.5943/mycosphere/6/3/7 Patellariaceae revisited Yacharoen S1,2, Tian Q1,2, Chomnunti P1,2, Boonmee S1, Chukeatirote E2, Bhat JD3 and Hyde KD1,2,4,5* 1Institute of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100, Thailand 2School of Science, Mae Fah Luang University, Chiang Rai, 57100, Thailand 3Formerly at Department of Botany, Goa University, Goa 403 206, India 4Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Science, Kunming 650201, Yunnan, China 5World Agroforestry Centre, East and Central Asia, Kunming 650201, Yunnan, China Yacharoen S, Tian Q, Chomnunti P, Boonmee S, Chukeatirote E, Bhat JD, Hyde KD 2015 – Patellariaceae revisited. Mycosphere 6(3), 290–326, Doi 10.5943/mycosphere/6/3/7 Abstract The Dothideomycetes include several genera whose ascomata can be considered as apothecia and thus would be grouped as discomycetes. Most genera are grouped in the family Patellariaceae, but also Agrynnaceae and other families. The Hysteriales include genera having hysterioid ascomata and can be confused with species in Patellariaceae with discoid apothecia if the opening is wide enough. In this study, genera of the family Patellariaceae were re-examined and characterized based on morphological examination. As a result of this study the genera Baggea, Endotryblidium, Holmiella, Hysteropatella, Lecanidiella, Lirellodisca, Murangium, Patellaria, Poetschia, Rhizodiscina, Schrakia, Stratisporella and Tryblidaria are retained in the family Patellariaceae. The genera Banhegyia, Pseudoparodia and Rhytidhysteron are excluded because of differing morphology and/or molecular data. -
Ascomycota: Ostropales: Graphidaceae) De La Selva Alta Perennifolia De Los Tuxtlas, Veracruz, México
Una especie nueva y peculiar de Graphis (Ascomycota: Ostropales: Graphidaceae) de la selva alta perennifolia de Los Tuxtlas, Veracruz, México Bárcenas-Peña, A., Miranda-González, R., & de los Ángeles Herrera-Campos, M. (2015). Una especie nueva y peculiar de Graphis (Ascomycota: Ostropales: Graphidaceae) de la selva alta perennifolia de Los Tuxtlas, Veracruz, México. Revista Mexicana de Biodiversidad, 86(3), 559-564. doi10.1016/j.rmb.2015.05.001 10.1016/j.rmb.2015.05.001 Instituto de Biología Version of Record http://cdss.library.oregonstate.edu/sa-termsofuse Disponible en www.sciencedirect.com Revista Mexicana de Biodiversidad Revista Mexicana de Biodiversidad 86 (2015) 559–564 www.ib.unam.mx/revista/ Taxonomía y sistemática Una especie nueva y peculiar de Graphis (Ascomycota: Ostropales: Graphidaceae) de la selva alta perennifolia de Los Tuxtlas, Veracruz, México A peculiar new species of Graphis (Ascomycota: Ostropales: Graphidaceae) from the evergreen forest of Los Tuxtlas, Veracruz, Mexico a a,b Alejandrina Bárcenas-Pena˜ , Ricardo Miranda-González a,∗ y María de los Ángeles Herrera-Campos a Departamento de Botánica, Instituto de Biología, Universidad Nacional Autónoma de México. Apartado postal 70-327, 04510 México, D. F. , México b Department of Botany and Plant Pathology, Oregon State University, 2082 Cordley Hall, Corvallis, Oregon 97331-2902, Estados Unidos Recibido el 10 de febrero de 2014; aceptado el 27 de febrero de 2015 Disponible en Internet el 29 de julio de 2015 Resumen Graphis robertusii Bárcenas-Pena,˜ Herrera-Campos y Miranda es descrita por primera vez para la selva alta perennifolia de Los Tuxtlas, Veracruz. Es una especie conspicua caracterizada por lirelas erumpentes con margen talino lateral, labios no estriados blancos pruinosos, excípulo completamente carbonizado, himenio insperso, esporas transversalmente septadas y ácidos estíctico, salazínico y conestíctico como metabolitos secundarios. -
Some Lichenicolous Fungi from Guatemala, with the Description of a New Species
Herzogia 19 (2006): 191–197 191 Some lichenicolous fungi from Guatemala, with the description of a new species Javier ETAYO & Pieter P. G. VAN DEN BOOM Abstract: ETAYO, J. & VAN DEN BOOM, P. P. G. 2006. Some lichenicolous fungi from Guatemala, with the description of a new species. – Herzogia 19: 191–197. Twenty three species of lichenicolous fungi are reported from Guatemala. Localities as well as notes on morphology and taxonomy are given. Capronia guatemalense on Parmotrema is described as new to science. A key to Abrothallus on Usnea is provided. The anamorph of Anisomeridium polypori is reported as lichenicolous for the second time. Zusammenfassung: ETAYO, J. & VAN DEN BOOM, P. P. G. 2006. Einige lichenicole Pilze von Guatemala, und Beschreibung einer neuen Art. – Herzogia 19: 191–197. Dreiundzwanzig Arten lichenicoler Pilze werden von Guatemala gemeldet. Anmerkungen zur Taxonomie, Morphologie und Verbreitung werden gegeben. Capronia guatemalense auf Parmotrema wird neu beschrieben. Ein Schlüssel für Abrothallus auf Usnea wird präsentiert. Das Anamorph von Anisomeridium polypori wird zum zweiten Mal als liche- nicol gemeldet. Key words: Lichens, mycoflora of Guatemala, Abrothallus, Capronia, Central America, new records, biodiversity. Introduction Only a very few literature reports of lichens from Guatemala exist. Two publications, dealing explicitly with foliicolous lichens of Guatemala, are known (BARILLAS & LÜCKING 1992) and BARILLAS et al. (1993). A compilation of mainly these literature records is presented on Internet (FEUERER 2005). It is evident that the flora of lichens and lichenicolous fungi of this country is very poorly known. As far as we know, no papers dealing exclusively with lichenicolous fungi from Guatemala have ever been published. -
Australasian Lichenology Number 56, January 2005
Australasian Lichenology Number 56, January 2005 Australasian Lichenology Number 56, January 2005 ISSN 1328-4401 The Austral Pannaria immixta c.olonizes rock, bark, and occasionally bryophytes in both shaded and well-lit humid lowlands. Its two most distinctive traits are its squamulose thallus and its gyrose apothecial discs. 1 mm c:::::===- CONTENTS NEWS Kantvilas, ~ack Elix awarded the Acharius medal at IAL5 2 BOOK REVIEW Galloway, DJ-The Lichen Hunters, by Oliver Gilbert (2004) 4 RECENT LITERATURE ON AUSTRALASIAN LICHENS 7 ADDITIONAL LICHEN RECORDS FROM AUSTRALIA Elix, JA; Lumbsch, HT (55)-Diploschistes conception is 8 ARTICLES Archer, AW-Australian species in the genus Diorygma (Graphidaceae) ....... 10 Elix, JA; Blanco, 0; Crespo, A-A new species of Flauoparmelia (Parmeliaceae, lichenized Ascomycota) from Western Australia ...... .... ............................ ...... 12 Galloway, DJ; Sancho, LG-Umbilicaria murihikuana and U. robusta (Umbili cariaceae: Ascomycota), two new taxa from Aotearoa New Zealand .. ... .. ..... 16 Elix, JA; Bawingan, PA; Lardizaval, M; Schumm, F-Anew species ofMenegazzia (Parmeliaceae, lichenized Ascomycota) and new records of Parmeliaceae from Papua New Guinea and the Philippines .................................. .. .................... 20 Malcolm, WM-'ITansfer ofDimerella rubrifusca to Coenogonium ........ ......... 25 Johnson, PN- Lichen succession near Arthur's Pass, New Zealand ............... 26 NEWS JACK ELIXAWARDED THE ACHARIUS MEDALAT IAL5 The recent Fifth Conference of the International Association for Lichenology (1AL5) in Tartu, Estonia, was a highly successful event, and most Australasian lichenologists will have the opportunity to read of its various academic achieve ments in other media*. The social programme included the traditionallAL Din ner, where, after many days of symposia, poster sessions, excursions, meetings and other lichenological events, conference delegates mingle informally and dust away their weariness over food and drink. -
New Or Otherwise Interesting Lichens. VII, Including a World Key to the Lichen Genus Heiomasia
New or otherwise interesting lichens. VII 1 New or otherwise interesting lichens. VII, including a world key to the lichen genus Heiomasia Klaus Kalb Lichenologisches Institut Neumarkt Im Tal 12, D-92318 Neumarkt/Opf., Germany and Institute of Plant Sciences, University of Regensburg, Universitätsstraße 31 D-93053 Regensburg, Germany. email: [email protected] Abstract Eight species new to science are described, Allographa grandis from Cameroon which is distinguished by its very large ascomata, richly muriform, large ascospores and an inspersed hymenium (type B); Bapalmuia microspora from Malaysia which differs from B. consanguinea in having shorter and broader ascospores and a granular thallus; Diorygma cameroonense from Cameroon which differs from D. sticticum in having larger ascospores with more septa; Glyphis frischiana which is similar to G. atrofusca but differs in producing secondary lichen compounds, the first species in Glyphis in doing so. Two new species are added to the genus Heiomasia, viz. H. annamariae from Malaysia, which differs from H. sipmanii in producing the stictic acid aggr. and H. siamensis from Thailand, distinguished from H. sipmanii in containing hypoprotocetraric acid as a major metabolite. The published chemistry of several species of Heiomasia is revised and a new substance, heiomaseic acid, with relative Rf-values 5/19/8, is demonstrated for H. seavey- orum, H. siamensis and H. sipmanii. A world-wide key to the known species of Heiomasia is presented. Myriotrema squamiferum, a fertile species from Malaysia, is distinguished from M. frondosolucens by lacking lichexanthone. As there are conflicting literature data concerning Ocellularia crocea, the type specimen was investigated and the results are reported. -
Some New Additions to the Lichen Family Roccellaceae (Arthoniales) from India
ISSN: 2349 – 1183 1(1): 01–03, 2014 Research article Some new additions to the lichen family Roccellaceae (Arthoniales) from India A. R. Logesh, Santosh Joshi, Komal K. Ingle and Dalip K. Upreti* Lichenology laboratory, Plant Diversity Systematics and Herbarium Division, CSIR-National Botanical Research Institute, Rana Pratap Marg, Lucknow-226001, Uttar Pradesh, India. *Corresponding Author: [email protected] [Accepted: 15 March 2014] Abstract: Three species of crustose lichens (Bactrospora acicularis, B. intermedia and Sigridea chloroleuca) belonging to the family Roccellaceae are reported here as new records for India. The taxonomic characters of each species were described briefly and supported by ecology, distribution and illustrations. Keywords: Lichens - New records - Eastern Himalayas - Southern India. [Cite as: Logesh AR, Joshi S, Ingle KK & Upreti DK (2014) Some new additions to the lichen family Rocellaceae (Arthoniales) from India. Tropical Plant Research 1(1): 1–3] INTRODUCTION The genus Bactrospora A. Massal. was revised by Egea & Torrente (1993) and represented by 20 species and one variety, among them four were previously reported from India Bactrospora jenikii (Vìzda) Egea & Torrente, B. lamprospora (Nyl.) Lendemer, B. metabola (Nyl.) Egea & Torrente, B. myriadea (Fée) Egea & Torrente (Singh & Sinha 2010). The genus Bactrospora differs from similar genera Lecanactis and Opegrapha by lecideine ascomata, dark proper exciple and elongate, transversely septate, fragmenting ascospores (Ponzetti & McCune 2006). The allopatric genus Sigridea was monographed by Tehler (1993) with four species world- wide. In India Nylander (1867) recorded single species of Sigridea as Platygrapha galucomoides Nyl. which is now known as Sigridea glaucomoides (Nyl.) Tehler. Sigridea species are recognized by white thallus, circular ascomata, well developed thalline margin, hyaline, 3-septate, curved ascospores with one end tapering and the presence of psoromic acid. -
An Evolving Phylogenetically Based Taxonomy of Lichens and Allied Fungi
Opuscula Philolichenum, 11: 4-10. 2012. *pdf available online 3January2012 via (http://sweetgum.nybg.org/philolichenum/) An evolving phylogenetically based taxonomy of lichens and allied fungi 1 BRENDAN P. HODKINSON ABSTRACT. – A taxonomic scheme for lichens and allied fungi that synthesizes scientific knowledge from a variety of sources is presented. The system put forth here is intended both (1) to provide a skeletal outline of the lichens and allied fungi that can be used as a provisional filing and databasing scheme by lichen herbarium/data managers and (2) to announce the online presence of an official taxonomy that will define the scope of the newly formed International Committee for the Nomenclature of Lichens and Allied Fungi (ICNLAF). The online version of the taxonomy presented here will continue to evolve along with our understanding of the organisms. Additionally, the subfamily Fissurinoideae Rivas Plata, Lücking and Lumbsch is elevated to the rank of family as Fissurinaceae. KEYWORDS. – higher-level taxonomy, lichen-forming fungi, lichenized fungi, phylogeny INTRODUCTION Traditionally, lichen herbaria have been arranged alphabetically, a scheme that stands in stark contrast to the phylogenetic scheme used by nearly all vascular plant herbaria. The justification typically given for this practice is that lichen taxonomy is too unstable to establish a reasonable system of classification. However, recent leaps forward in our understanding of the higher-level classification of fungi, driven primarily by the NSF-funded Assembling the Fungal Tree of Life (AFToL) project (Lutzoni et al. 2004), have caused the taxonomy of lichen-forming and allied fungi to increase significantly in stability. This is especially true within the class Lecanoromycetes, the main group of lichen-forming fungi (Miadlikowska et al. -
One Hundred and Seventy-Five New Species of Graphidaceae: Closing the Gap Or a Drop in the Bucket?
Phytotaxa 189 (1): 007–038 ISSN 1179-3155 (print edition) www.mapress.com/phytotaxa/ Article PHYTOTAXA Copyright © 2014 Magnolia Press ISSN 1179-3163 (online edition) http://dx.doi.org/10.11646/phytotaxa.189.1.4 One hundred and seventy-five new species of Graphidaceae: closing the gap or a drop in the bucket? ROBERT LÜCKING1, MARK K. JOHNSTON1, ANDRÉ APTROOT2, EKAPHAN KRAICHAK1, JAMES C. LENDEMER3, KANSRI BOONPRAGOB4, MARCELA E. S. CÁCERES5, DAMIEN ERTZ6, LIDIA ITATI FERRARO7, ZE-FENG JIA8, KLAUS KALB9,10, ARMIN MANGOLD11, LEKA MANOCH12, JOEL A. MERCADO-DÍAZ13, BIBIANA MONCADA14, PACHARA MONGKOLSUK4, KHWANRUAN BUTSATORN PAPONG 15, SITTIPORN PARNMEN16, ROUCHI N. PELÁEZ14, VASUN POENGSUNGNOEN17, EIMY RIVAS PLATA1, WANARUK SAIPUNKAEW18, HARRIE J. M. SIPMAN19, JUTARAT SUTJARITTURAKAN10,18, DRIES VAN DEN BROECK6, MATT VON KONRAT1, GOTHAMIE WEERAKOON20 & H. THORSTEN 1 LUMBSCH 1Science & Education, The Field Museum, 1400 South Lake Shore Drive, Chicago, Illinois 60605-2496, U.S.A.; email: [email protected], [email protected], [email protected], [email protected] 2ABL Herbarium, G.v.d.Veenstraat 107, NL-3762 XK Soest, The Netherlands; email: [email protected] 3Institute of Systematic Botany, The New York Botanical Garden, Bronx, NY 10458-5126, U.S.A.; email: [email protected] 4Lichen Research Unit, Department of Biology, Faculty of Science, Ramkhamhaeng University, Ramkhamhaeng 24 road, Bangkok, 10240 Thailand; email: [email protected] 5Departamento de Biociências, Universidade Federal de Sergipe, CEP: 49500-000, -
Habitat Quality and Disturbance Drive Lichen Species Richness in a Temperate Biodiversity Hotspot
Oecologia (2019) 190:445–457 https://doi.org/10.1007/s00442-019-04413-0 COMMUNITY ECOLOGY – ORIGINAL RESEARCH Habitat quality and disturbance drive lichen species richness in a temperate biodiversity hotspot Erin A. Tripp1,2 · James C. Lendemer3 · Christy M. McCain1,2 Received: 23 April 2018 / Accepted: 30 April 2019 / Published online: 15 May 2019 © Springer-Verlag GmbH Germany, part of Springer Nature 2019 Abstract The impacts of disturbance on biodiversity and distributions have been studied in many systems. Yet, comparatively less is known about how lichens–obligate symbiotic organisms–respond to disturbance. Successful establishment and development of lichens require a minimum of two compatible yet usually unrelated species to be present in an environment, suggesting disturbance might be particularly detrimental. To address this gap, we focused on lichens, which are obligate symbiotic organ- isms that function as hubs of trophic interactions. Our investigation was conducted in the southern Appalachian Mountains, USA. We conducted complete biodiversity inventories of lichens (all growth forms, reproductive modes, substrates) across 47, 1-ha plots to test classic models of responses to disturbance (e.g., linear, unimodal). Disturbance was quantifed in each plot using a standardized suite of habitat quality variables. We additionally quantifed woody plant diversity, forest density, rock density, as well as environmental factors (elevation, temperature, precipitation, net primary productivity, slope, aspect) and analyzed their impacts on lichen biodiversity. Our analyses recovered a strong, positive, linear relationship between lichen biodiversity and habitat quality: lower levels of disturbance correlate to higher species diversity. With few exceptions, additional variables failed to signifcantly explain variation in diversity among plots for the 509 total lichen species, but we caution that total variation in some of these variables was limited in our study area. -
Lichen Life in Antarctica a Review on Growth and Environmental Adaptations of Lichens in Antarctica
Lichen Life in Antarctica A review on growth and environmental adaptations of lichens in Antarctica Individual Project for ANTA 504 for GCAS 08/09 Lorna Little Contents Antarctic Vegetation ...............................................................................................................................3 The Basics of Lichen Life .........................................................................................................................4 Environmental Influences .......................................................................................................................7 Nutrients .............................................................................................................................................7 Water Relations and Temperature .....................................................................................................7 UV‐B Radiation and Climate Change Effects.......................................................................................8 Variations in Lichen Growth and Colonisation......................................................................................10 Growth rate.......................................................................................................................................10 Case Studies of Antarctic Lichens .....................................................................................................13 Colonisation ......................................................................................................................................15