A Reappraisal of Tylenchina (Nemata)
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(Musa AAA) As Influenced by Agronomic Factors
Institut für Nutzpflanzenwissenschaften und Ressourcenschutz der Rheinischen Friedrich-Wilhelms-Universität Bonn The importance of the antagonistic potential in the management of populations of plant-parasitic nematodes in banana (Musa AAA) as influenced by agronomic factors Inaugural-Dissertation zur Erlangung des Grades Doktor der Agrarwissenschaften (Dr. agr.) der Hohen Landwirtschaftlichen Fakultät der Rheinischen Friedrich- Wilhelms-Universität zu Bonn vorgelegt am 15. Juni 2010 von Anthony Barry Pattison South Johnstone Australia Referent: Prof. Dr. R.A. Sikora Korreferent: Prof. Dr. H. Goldbach Tag der mündlichen Prüfung: 15 September 2011 Erscheinungsjahr: 2011 Dedication: This work is dedicated to the support given to me by family and friends. Especially to my wife Susan, daughters Katie and Emily for their patience while I completed this work. Also, to the friends I have made along the way, who have helped to make the world a little smaller. Summary Dr.agr. Thesis: A Pattison The importance of the antagonistic potential in the management of populations of plant-parasitic nematodes in banana ( Musa AAA) as influenced by agronomic factors Plant-parasitic nematodes are a major obstacle to sustainable banana production around the world. The use of organic amendments was investigated as one method to stimulate organisms that are antagonistic to plant-parasitic nematodes. Nine different amendments; mill mud, mill ash (by-products from processing sugarcane), biosolids, municipal waste (MW) compost, banana residue, grass hay, legume hay, molasses and calcium silicate (CaSi) were applied in a glasshouse experiment. Significant suppression of Radopholus similis occurred in soils amended with legume hay, grass hay, banana residue and mill mud relative to untreated soil, which increased the nematode community structure index, indicating greater potential for predation. -
Influence of Pratylenchus Vulnus and Meloidogyne Hapla on the Growth of Rootstocks of Rose~ G
influence of Pratylenchus vulnus and Meloidogyne hapla on the Growth of Rootstocks of Rose~ G. S. SANTO 2 and BERT LEAR '~ Abstract: Pratylenchus vulnus is involved in a disease of Rosa noisettiana 'Manetti" rose rootstock characterized by darkening of roots, death of feeder toots, and stunting of entire plants. The disease is more severe when plants are grown in silt loam soil than when they are grown in sandy loam soil. The nematodes reproduce best in silt loam soil at 20 C. Meloidogyne hapla did not affect the growth of Manetti. Rosa sp. 'Dr. Huey', Manetti, and R. odorata rose rootstocks were found to be good hosts for P. vulnus whereas R. multiflora was less suitable. M. hapla re- produced well on R. odorata, Dr. Huey, and R. multi[lora, but not on Maneni. Key Words: root- lesion nematode, root-knot nematode, reproduction, soil temperature, soil type. Pratylenchus vulnus Allen and Jensen roses was associated with a reduction in the was first reported from rose roots in Cali- population of M. hapla and Xiphinema fornia in 1953 (14). A 1970 survey of com- arnericanum Cobb as a result of multiple mercial rose greenhouses in northern Cali- applications of 1,2-dibromo-3-chloropro- fornia shows that this nematode is now pane (DBCP) (8). widely distributed (9), and Allen and Jen- Rosa noisettiana Thory 'Manetti' is the sen (l) also report that P. vulnus is widely most popular rootstock used in growing distributed on field-grown roses in southern greenhouse roses for cut flowers. R. odorata California. Sweet and Rosa sp. -
Morphological, Molecular and Phylogenetic Study of Filenchus
Alvani et al., J Plant Pathol Microbiol 2015, S:3 Plant Pathology & Microbiology http://dx.doi.org/10.4172/2157-7471.S3-001 Research Article Open Access Morphological, Molecular and Phylogenetic Study of Filenchus aquilonius as a New Species for Iranian Nematofauna and Some Other Known Nematodes from Iran Based on D2D3 Segments of 28 srRNA Gene Somaye Alvani1, Esmat Mahdikhani Moghaddam1*, Hamid Rouhani1 and Abbas Mohammadi2 1Department of Plant Pathology, Ferdowsi University of Mashhad, Mashhad, Iran 2Department of Plant Pathology, University of Birjand, Birjand, Iran Abstract Ziziphus zizyphus is very important crop in Iran. Because there isn’t any research of plant parasitic nematodes on Z. zizyphus, authors were encouraged to work on it. Nematodes isolated from the soil samples by whitehead method (1965) and permanent slides were prepared. Among the species Filenchus aquilonius is redescribed for the first time from Southern Khorasan province.F. aquilonius is characterized by lip region rounded, not offset, with fine annuls; four incisures in lateral line; Stylet moderately developed, 10-11.8 µm long with rounded knobs; Hemizonid immediately in front of excretory pore; Deirids at the level of excretory pore; Spermatheca an axial chamber and offset pouch; Tail about 120-157 µm, tapering gradually to a pointed terminus. For molecular identification the large subunit expansion segments of D2/D3 were performed for F. aquilonius to examine the phylogenetic relationships with other Tylenchids. DNA sequence data revealed that F. aquilonius had closet phylogenetic affinity withIrantylenchus vicinus as a sister group and with other Filenchus species for this region and placed them in one clade with 100% for bootstap value support. -
Nematodes and Agriculture in Continental Argentina
Fundam. appl. NemalOl., 1997.20 (6), 521-539 Forum article NEMATODES AND AGRICULTURE IN CONTINENTAL ARGENTINA. AN OVERVIEW Marcelo E. DOUCET and Marîa M.A. DE DOUCET Laboratorio de Nematologia, Centra de Zoologia Aplicada, Fant/tad de Cien.cias Exactas, Fisicas y Naturales, Universidad Nacional de Cordoba, Casilla df Correo 122, 5000 C6rdoba, Argentina. Acceplecl for publication 5 November 1996. Summary - In Argentina, soil nematodes constitute a diverse group of invertebrates. This widely distributed group incJudes more than twO hundred currently valid species, among which the plant-parasitic and entomopathogenic nematodes are the most remarkable. The former includes species that cause damages to certain crops (mainly MeloicU:igyne spp, Nacobbus aberrans, Ditylenchus dipsaci, Tylenchulus semipenetrans, and Xiphinema index), the latter inc1udes various species of the Mermithidae family, and also the genera Steinernema and Helerorhabditis. There are few full-time nematologists in the country, and they work on taxonomy, distribution, host-parasite relationships, control, and different aspects of the biology of the major species. Due tO the importance of these organisms and the scarcity of information existing in Argentina about them, nematology can be considered a promising field for basic and applied research. Résumé - Les nématodes et l'agriculture en Argentine. Un aperçu général - Les nématodes du sol représentent en Argentine un groupe très diversifiè. Ayant une vaste répartition géographique, il comprend actuellement plus de deux cents espèces, celles parasitant les plantes et les insectes étant considèrées comme les plus importantes. Les espèces du genre Me/oi dogyne, ainsi que Nacobbus aberrans, Dùylenchus dipsaci, Tylenchulus semipenetrans et Xiphinema index représentent un réel danger pour certaines cultures. -
ENTO-364 (Introducto
K. K. COLLEGE OF AGRICULTURE, NASHIK DEPARTMENT OF AGRICULTURAL ENTOMOLOGY THEORY NOTES Course No.:- ENTO-364 Course Title: - Introductory Nematology Credits: - 2 (1+1) Compiled By Prof. T. B. Ugale & Prof. A. S. Mochi Assistant Professor Department of Agricultural Entomology 0 Complied by Prof. T. B. Ugale & Prof. A. S. Mochi (K. K. Wagh College of Agriculture, Nashik) TEACHING SCHEDULE Semester : VI Course No. : ENTO-364 Course Title : Introductory Nematology Credits : 2(1+1) Lecture Topics Rating No. 1 Introduction- History of phytonematology and economic 4 importance. 2 General characteristics of plant parasitic nematodes. 2 3 Nematode- General morphology and biology. 4 4 Classification of nematode up to family level with 4 emphasis on group of containing economical importance genera (Taxonomic). 5 Classification of nematode by habitat. 2 6 Identification of economically important plant nematodes 4 up to generic level with the help of key and description. 7 Symptoms caused by nematodes with examples. 4 8 Interaction of nematodes with microorganism 4 9 Different methods of nematode management. 4 10 Cultural methods 4 11 Physical methods 2 12 Biological methods 4 13 Chemical methods 2 14 Entomophilic nematodes- Species Biology 2 15 Mode of action 2 16 Mass production techniques for EPN 2 Reference Books: 1) A Text Book of Plant Nematology – K. D. Upadhay & Kusum Dwivedi, Aman Publishing House 2) Fundamentals of Plant Nematology – E. J. Jonathan, S. Kumar, K. Deviranjan, G. Rajendran, Devi Publications, 8, Couvery Nagar, Karumanolapam, Trichirappalli, 620 001. 3) Plant Nematodes - Methodology, Morphology, Systematics, Biology & Ecology Majeebur Rahman Khan, Department of Plant Protection, Faculty of Agricultural Sciences, Aligarh Muslim University, Aligarh, India. -
"Structure, Function and Evolution of the Nematode Genome"
Structure, Function and Advanced article Evolution of The Article Contents . Introduction Nematode Genome . Main Text Online posting date: 15th February 2013 Christian Ro¨delsperger, Max Planck Institute for Developmental Biology, Tuebingen, Germany Adrian Streit, Max Planck Institute for Developmental Biology, Tuebingen, Germany Ralf J Sommer, Max Planck Institute for Developmental Biology, Tuebingen, Germany In the past few years, an increasing number of draft gen- numerous variations. In some instances, multiple alter- ome sequences of multiple free-living and parasitic native forms for particular developmental stages exist, nematodes have been published. Although nematode most notably dauer juveniles, an alternative third juvenile genomes vary in size within an order of magnitude, com- stage capable of surviving long periods of starvation and other adverse conditions. Some or all stages can be para- pared with mammalian genomes, they are all very small. sitic (Anderson, 2000; Community; Eckert et al., 2005; Nevertheless, nematodes possess only marginally fewer Riddle et al., 1997). The minimal generation times and the genes than mammals do. Nematode genomes are very life expectancies vary greatly among nematodes and range compact and therefore form a highly attractive system for from a few days to several years. comparative studies of genome structure and evolution. Among the nematodes, numerous parasites of plants and Strikingly, approximately one-third of the genes in every animals, including man are of great medical and economic sequenced nematode genome has no recognisable importance (Lee, 2002). From phylogenetic analyses, it can homologues outside their genus. One observes high rates be concluded that parasitic life styles evolved at least seven of gene losses and gains, among them numerous examples times independently within the nematodes (four times with of gene acquisition by horizontal gene transfer. -
Silencing Parasitism Effectors of the Root Lesion Nematode, Pratylenchus Thornei
Silencing parasitism effectors of the root lesion nematode, Pratylenchus thornei. This thesis is presented for the degree of Doctor of Philosophy of Murdoch University by Sameer Dilip Khot B.Sc. (Botany) & M.Sc. (Plant Pathology & Mycology), University of Mumbai, India M.S. (Plant Pathology), North Dakota State University, USA Western Australian State Agricultural Biotechnology Centre School of Veterinary and Life Sciences Murdoch University Perth, Western Australia 2018 1 DECLARATION I declare that this thesis is my own account of my research and contains as its main content work which has not previously been submitted for a degree at any tertiary education institution. Signature: Sameer D. Khot Date: 22-01-2018 2 ABSTRACT The root lesion nematode (RLN), Pratylenchus thornei, is a biotrophic migratory pest of plant roots and its infestation causes losses in many economically important crops. RNA interference (RNAi) is a naturally occurring eukaryotic phenomenon and can be used to silence parasitism effector genes of P. thornei using host-mediated RNAi. This may be developed as an environmentally friendly and a cost-effective control strategy. The overall aims of this research were to investigate the effects of in vitro and in planta RNAi silencing of putative P. thornei parasitism effector genes, and their nematicidal effects in two host plants. Five putative target parasitism genes vital for nematode entry into roots (Pt-Eng-1, Pt- PL), feeding (Pt-CLP) and suppressing host defence responses (Pt-UEP, Pt-GST) were identified, validated in silico using comparative bioinformatics, cloned into suitable in vitro transcription and binary vectors, and advanced to RNAi studies. -
Diversity, Phylogeny, Characterization and Diagnostics of Root-Knot and Lesion Nematodes
Diversity, phylogeny, characterization and diagnostics of root-knot and lesion nematodes Toon Janssen Promotors: Prof. Dr. Wim Bert Prof. Dr. Gerrit Karssen Thesis submitted to obtain the degree of doctor in Sciences, Biology Proefschrift voorgelegd tot het bekomen van de graad van doctor in de Wetenschappen, Biologie 1 Table of contents Acknowledgements Chapter 1: general introduction 1 Organisms under study: plant-parasitic nematodes .................................................... 11 1.1 Pratylenchus: root-lesion nematodes ..................................................................................... 13 1.2 Meloidogyne: root-knot nematodes ....................................................................................... 15 2 Economic importance ..................................................................................................... 17 3 Identification of plant-parasitic nematodes .................................................................. 19 4 Variability in reproduction strategies and genome evolution ..................................... 22 5 Aims .................................................................................................................................. 24 6 Outline of this study ........................................................................................................ 25 Chapter 2: Mitochondrial coding genome analysis of tropical root-knot nematodes (Meloidogyne) supports haplotype based diagnostics and reveals evidence of recent reticulate evolution. 1 Abstract -
PCR-RFLP and Sequencing Analysis of Ribosomal DNA of Bursaphelenchus Nematodes Related to Pine Wilt Disease(L)
Fundam. appl. Nemalol., 1998,21 (6), 655-666 PCR-RFLP and sequencing analysis of ribosomal DNA of Bursaphelenchus nematodes related to pine wilt disease(l) Hideaki IvVAHORI, Kaku TSUDA, Natsumi KANZAKl, Katsura IZUI and Kazuyoshi FUTAI Cmduate School ofAgriculture, Kyoto University, Sakyo-ku, Kyoto 606-8502, Japan. Accepted for publication 23 December 1997. Summary -A polymerase chain reaction - restriction fragment polymorphism (PCR-RFLP) analysis was used for the discri mination of isolates of Bursaphelenchus nematode. The isolares of B. xylophilus examined originared from Japan, the United Stares, China, and Canada and the B. mucronatus isolates from Japan, China, and France. Ribosomal DNA containing the 5.8S gene, the internai transcribed spacer region 1 and 2, and partial regions of 18S and 28S gene were amplified by PCR. Digestion of the amplified products of each nematode isolate with twelve restriction endonucleases and examination of resulting RFLP data by cluster analysis revealed a significant gap between B. xylophllus and B. mucronatus. Among the B. xylophilus isolares examined, Japanese pathogenic, Chinese and US isolates were ail identical, whereas Japanese non-pathogenic isolares were slightly distinct and Canadian isolates formed a separate cluster. Among the B. mucronalUS isolates, two Japanese isolares were very similar to each other and another Japanèse and one Chinese isolare were identical to each other. The DNA sequence data revealed 98 differences (nucleotide substitutions or gaps) in 884 bp investigated between B. xylophilus isolare and B. mucronmus isolate; DNA sequence data of Aphelenchus avenae and Aphelenchoides fragariae differed not only from those of Bursaphelenchus nematodes, but also from each other. -
A Reappraisal of Tylenchina (Nemata) 1
University of Nebraska - Lincoln DigitalCommons@University of Nebraska - Lincoln Faculty Publications from the Harold W. Manter Laboratory of Parasitology Parasitology, Harold W. Manter Laboratory of 1987 A Reappraisal of Tylenchina (Nemata) 1. For a New Approach to the Taxonomy of Tylenchina Michel Luc Muséun1 national d'Histoire naturelle Armand R. Maggenti University of California - Davis Renaud Fortuner California Department of Food and Agriculture Dewey J. Raski University of California - Davis Etienne Geraert Instituut voor Dierkunde Follow this and additional works at: https://digitalcommons.unl.edu/parasitologyfacpubs Part of the Parasitology Commons Luc, Michel; Maggenti, Armand R.; Fortuner, Renaud; Raski, Dewey J.; and Geraert, Etienne, "A Reappraisal of Tylenchina (Nemata) 1. For a New Approach to the Taxonomy of Tylenchina" (1987). Faculty Publications from the Harold W. Manter Laboratory of Parasitology. 109. https://digitalcommons.unl.edu/parasitologyfacpubs/109 This Article is brought to you for free and open access by the Parasitology, Harold W. Manter Laboratory of at DigitalCommons@University of Nebraska - Lincoln. It has been accepted for inclusion in Faculty Publications from the Harold W. Manter Laboratory of Parasitology by an authorized administrator of DigitalCommons@University of Nebraska - Lincoln. Tribune A REAPPRAISAL OF "IYL,ENCHINA (NEMATA) 1. FOR A NEW APPROACH TO THE TAXONOMY OF TYLENCHINA Michel LUC",Armand R. MAGGENTI**, Renaud FORTUNER***, Dewey J. RASKI** and Etienne GERAERT**** * Muséun1 national d'Histoire naturelle, Laboratoire des Vers, 61, rue de Buffon, 75005 Paris; ** Division of Nematology, University of California, Davis, CA 95616, USA; *** California Department of Food and Agriculture, Analysis and Identification (Nematology), 1220 N. Street, Sacramento, CA 95814, USA, and **** Rijksuniversiteit Gent, Instituut voor Dierkunde, Ledeganckstraat 35, 9000 Gent, Belgium. -
Life-Stage Specific Transcriptomes of a Migratory Endoparasitic Plant
www.nature.com/scientificreports OPEN Life-stage specifc transcriptomes of a migratory endoparasitic plant nematode, Radopholus similis Received: 20 July 2018 Accepted: 2 April 2019 elucidate a diferent parasitic and Published: xx xx xxxx life strategy of plant parasitic nematodes Xin Huang, Chun-Ling Xu, Si-Hua Yang, Jun-Yi Li, Hong-Le Wang, Zi-Xu Zhang, Chun Chen & Hui Xie Radopholus similis is an important migratory endoparasitic nematode, severely harms banana, citrus and many other commercial crops. Little is known about the molecular mechanism of infection and pathogenesis of R. similis. In this study, 64761 unigenes were generated from eggs, juveniles, females and males of R. similis. 11443 unigenes showed signifcant expression diference among these four life stages. Genes involved in host parasitism, anti-host defense and other biological processes were predicted. There were 86 and 102 putative genes coding for cell wall degrading enzymes and antioxidase respectively. The amount and type of putative parasitic-related genes reported in sedentary endoparasitic plant nematodes are variable from those of migratory parasitic nematodes on plant aerial portion. There were no sequences annotated to efectors in R. similis, involved in feeding site formation of sedentary endoparasites nematodes. This transcriptome data provides a new insight into the parasitic and pathogenic molecular mechanisms of the migratory endoparasitic nematodes. It also provides a broad idea for further research on R. similis. Te burrowing nematode, Radopholus similis [(Cobb, 1893) Torne, 1949] is an important migratory endopar- asitic plant nematode that was frst discovered by Cobb in 1891, on the banana roots from Fiji. Previously, it was reported that R. -
Phylogenetic and Population Genetic Studies on Some Insect and Plant Associated Nematodes
PHYLOGENETIC AND POPULATION GENETIC STUDIES ON SOME INSECT AND PLANT ASSOCIATED NEMATODES DISSERTATION Presented in Partial Fulfillment of the Requirements for the Degree Doctor of Philosophy in the Graduate School of The Ohio State University By Amr T. M. Saeb, M.S. * * * * * The Ohio State University 2006 Dissertation Committee: Professor Parwinder S. Grewal, Adviser Professor Sally A. Miller Professor Sophien Kamoun Professor Michael A. Ellis Approved by Adviser Plant Pathology Graduate Program Abstract: Throughout the evolutionary time, nine families of nematodes have been found to have close associations with insects. These nematodes either have a passive relationship with their insect hosts and use it as a vector to reach their primary hosts or they attack and invade their insect partners then kill, sterilize or alter their development. In this work I used the internal transcribed spacer 1 of ribosomal DNA (ITS1-rDNA) and the mitochondrial genes cytochrome oxidase subunit I (cox1) and NADH dehydrogenase subunit 4 (nd4) genes to investigate genetic diversity and phylogeny of six species of the entomopathogenic nematode Heterorhabditis. Generally, cox1 sequences showed higher levels of genetic variation, larger number of phylogenetically informative characters, more variable sites and more reliable parsimony trees compared to ITS1-rDNA and nd4. The ITS1-rDNA phylogenetic trees suggested the division of the unknown isolates into two major phylogenetic groups: the HP88 group and the Oswego group. All cox1 based phylogenetic trees agreed for the division of unknown isolates into three phylogenetic groups: KMD10 and GPS5 and the HP88 group containing the remaining 11 isolates. KMD10, GPS5 represent potentially new taxa. The cox1 analysis also suggested that HP88 is divided into two subgroups: the GPS11 group and the Oswego subgroup.