Report on the Application of Non-Invasive Biosensors

Total Page:16

File Type:pdf, Size:1020Kb

Report on the Application of Non-Invasive Biosensors " " WP"5" Deliverable"5.3" Innovative monitoring techniques D5- 3 Report on the application of non- invasive biosensors Dissemination level Public" LEAD"CONTRACTOR" Akvaplan8niva"(APN)" AUTHORS" 1,4 " "1,2 1,3 "2 "2" Hector"Andrade"(APN) , Jean8Charles"Massabuau"(CNRS) ," Sabine"Cochrane"(APN) ,"Pierre"Ciret"(CNRS) ,"Damien"Tran"(CNRS) ," Mohamedou"Sow"(CNRS)"2,""Lionel"Camus""(APN)4"" " Contributions*as*follows:** 1"Writing"of"the"report" 2"Development"of"the"technology"(in"the"field"since"2005)"and"system"maintenance" 3"Wider"applications"for"environmental"assessments" 4"Application"of"the"method"to"the"Arctic" " APN:"Akvaplan8niva" CNRS:"Centre"National"de"la"Recherche"Scientifique" SUBMISSION"DATE" 28|"10|"2104 1" Deliverable"5.3"Report"on"the"application"of"non8invasive"biosensors"in"bivalves" " " " " 2" Contents 1." Foreword"and"acknowledgements" 5" 2." Executive"summary" 5" 3." Introduction" 6" 3.1" Brief"outline"of"the"concept,"hypotheses"and"report"aims"........................................................................."6" 3.2" Background"for"bivalve"molluscs"as"bio8sensors"........................................................................................"8" 3.3" About"the"Icelandic"scallop"Chlamys*islandica"..........................................................................................."9" 4." Materials"and"Methods" 10" 4.1" Study"site"and"biosensor"deployment"......................................................................................................"10" 4.2" Valvometry"and"behavior"analysis"using"HFNI"........................................................................................."12" 4.3" Environmental"abiotic"factors".................................................................................................................."14" 4.4" Determination"of"biological"cycles"..........................................................................................................."15" 4.5" Growth"cycles"..........................................................................................................................................."16" 4.6" Mortalities"................................................................................................................................................"16" 5." Results" 16" 5.1" General"....................................................................................................................................................."16" 5.2" Recording"baseline"biological"rhythms:"Gaping"behavior"in"relation"to"environmental"parameters"......."16" 5.3" Gaping"behavior"and"environmental"cycles"............................................................................................."17" 5.4" Mortality"..................................................................................................................................................."18" 5.5" Growth"....................................................................................................................................................."19" 6." Discussion" 21" 6.1" Discussion"of"results"obtained"so"far"........................................................................................................"21" 6.2" Laboratory"applications"and"validation"of"animal"health"........................................................................."21" 6.3" Evaluation"of"the"system"performance"...................................................................................................."22" 6.4" Applicability"of"the"method"for"MSFD"monitoring"..................................................................................."23" 6.5" Operational"strategy"and"costs"of"the"system".........................................................................................."24" 6.6" Outreach"..................................................................................................................................................."26" 7." Conclusions"and"future"directions" 26" 8." References" 27" " " 3" Deliverable"5.3"Report"on"the"application"of"non8invasive"biosensors"in"bivalves" " Tables Figure"1."The"Icelandic"scallop"Chlamys*islandica."Source:"www.naturalhistory.museumwales.ac.uk.""""...................."9" Figure"2."Location"of"Kongsfjorden"in"Svalbard/Spitsbergen,"where"biosensors"have"been"deployed"......................"11" Figure"3."The"old"pier"at"Kongsfjorden,"Svalbard"and"deployment"of"biosensors"during"the"polar"night"(date)."......."12" Figure"4."Chlamys*islandica"with"electrodes"glued"on"each"valve"(arrow"on"right"picture)."......................................."12" Figure"5."Schematic"representation"of"a"typical"bivalve"biosensor"setup.".................................................................."13" Figure"6."Photoperiod"measured"as"hours"of"light"from"January"(day"0)"to"December"(day"365)"in"2012.."..............."14" Figure"7."Tidal"activities"in"Ny"Ålesund"from"1th"of"January"2012"to"the"31th"December"2012."................................"15" Figure"8."Valvometry"recordings"(gaping"behaviour)"of"the"Icelandic"scallop"Chlamys*islandica.".............................."17" Figure"9."Actograms"of"valvometry"for"two"individual"scallops"in"Ny"Ålesund"during"216"days"................................."18" Figure"10."Valvometry"recordings"of"maximum"daily"valve"opening"of"Icelandic"scallop"Chlamys*islandica."............"19" Figure"11."Continuous"growth"measurements"for"C.*islandica"deployed"in"Ny"Ålesund"2012"to"2014."....................."20" " " " 4" 1. Foreword and acknowledgements Deliverable"583"of"the"DEVOTES"project"documents"the"method"and"results"obtained"through"one"of"the" innovative"monitoring"techniques"proposed"within"WP5,"Task"5.1.1:"Applying"remote"sensing"to"assess" marine"biodiversity"(from"species"distribution"to"habitat"types"and"their"heterogeneity)." The"task"description"is"as"follows:"High"frequency,"non8invasive"biosensors"to"measure"movement"and" shell"growth"in"bivalves"with"powerful"mathematical"analysis"and"recent"technological"advances"in"real" time" data" transfer" and" analysis" will" be" applied" on" Arctic" bivalves" at" three" different" locations" in" the" Barents"Sea"for"three"years"(note:"of"the"three"sites,"data"from"one"locality"is"dedicated"to"the"DEVOTES" project)."The"main"goals"will"be"to"(i)"further"understanding"of"bivalve"behaviour"and"shell"growth"in"a" remote"ecosystem"such"as"the"Arctic,(ii)"study"the"chronobiology"of"the"animal"in"geographical"locations" where" the" solar" rhythm" (dark" winter," 24" hr" light" in" the" summer)" and" food" availability" differ" from" temperate" regions," (iii)" generate" data" during" the" winter" season" of" the" Arctic" which" is" poorly" studied" owing"to"difficult"access"and"limited"logistics,"(iv)"to"study"the"impact"of"climate"on"animal"behaviour,"as" a"proxy"for"detecting"changes"in"water"quality."These"northern"locations"represent"areas"where"climate" change"is"a"fact,"and"therefore"give"reference"point"for"the"already"established"network"of""molluscan" eye""biosensors"elsewhere"across"Europe"(see"web"site"map)."" We"thank"collaborators"at"the"University"Centre"on"Svalbard"(UNIS)"and"the"research"facility"at"King's" Bay,"Ny"Ålesund"for"field"opportunities."We"further"thank"the"DEVOTES"community"for"lively"discussions" on"the""talking"clam""concept."In"particular,"we"thank"Mike"Elliott"(University"of"Hull)"for"debate"on"the" technology," Maria" C." Uyarra" (AZTI)" for" critical" comments" to" the" manuscript" and" Melanie" Austin" (Plymouth"Marine"Laboratory)"for"discussions"on"future"cost8benefit"assessments"of"the"technique." 2. Executive summary This" report" outlines" the" application" of" high" frequency," non8invasive" biosensors" (HFNI)" to" measure" biological" rhythms" and" shell" growth" in" bivalves" using" real" time" data" transfer" and" analysis" (http://molluscan8eye.epoc.u8bordeaux1.fr/index.php?lang=en&page=accueil&wid=)." The" method" is" being"applied"on"Arctic"bivalves"at"three"different"locations"in"the"Barents"Sea"over"a"period"of"three" years"and"beyond."This"report"outlines"the"method,"its"applications"and"the"results"achieved"from"so"far" after"2.5"years"of"deployment,"at"one"of"these"locations,"the"data"from"which"are"fully"dedicated"to"the" DEVOTES"project."The"ultimate"aim"of"this"activity"within"DEVOTES"is"to"determine"the"potential"utility"of" the"method"for"long8term"water"quality"monitoring,"in"the"context"of"the"Marine"strategy"Framework" Directive"(MSFD)." The" main" scientific" goals" of" the" application" are" to" (i)" further" understanding" of" bivalve" behaviour" and" shell" growth" in" a" remote" ecosystem" such" as" the" Arctic,(ii)" study" the" chronobiology" of" the" animal" in" geographical" locations" where" the" solar" rhythm" (dark" winter," 24" hr" light" in" the" summer)" and" food" availability" differ" from" temperate" regions," (iii)" generate" data" during" the" winter" season" of" the" Arctic" which"is"poorly"studied"owing"to"difficult"access"and"limited"logistics,"(iv)"to"study"the"impact"of"climate" on" animal" behaviour," as" a" proxy" for" detecting" changes" in" water" quality." These" northern" locations" 5" Deliverable"5.3"Report"on"the"application"of"non8invasive"biosensors"in"bivalves" " represent" areas" where" climate" change" is" a" fact," and" therefore" give" reference" point" for" the" already" established"network"of""molluscan"eye""biosensors"elsewhere"across"Europe"(see"web"site"map)."" This"report"had"the"following"aims:" • to"describe"the"background"for"using"non8invasive"bio8sensors"on"bivalve"molluscs;"
Recommended publications
  • TREATISE ONLINE Number 48
    TREATISE ONLINE Number 48 Part N, Revised, Volume 1, Chapter 31: Illustrated Glossary of the Bivalvia Joseph G. Carter, Peter J. Harries, Nikolaus Malchus, André F. Sartori, Laurie C. Anderson, Rüdiger Bieler, Arthur E. Bogan, Eugene V. Coan, John C. W. Cope, Simon M. Cragg, José R. García-March, Jørgen Hylleberg, Patricia Kelley, Karl Kleemann, Jiří Kříž, Christopher McRoberts, Paula M. Mikkelsen, John Pojeta, Jr., Peter W. Skelton, Ilya Tëmkin, Thomas Yancey, and Alexandra Zieritz 2012 Lawrence, Kansas, USA ISSN 2153-4012 (online) paleo.ku.edu/treatiseonline PART N, REVISED, VOLUME 1, CHAPTER 31: ILLUSTRATED GLOSSARY OF THE BIVALVIA JOSEPH G. CARTER,1 PETER J. HARRIES,2 NIKOLAUS MALCHUS,3 ANDRÉ F. SARTORI,4 LAURIE C. ANDERSON,5 RÜDIGER BIELER,6 ARTHUR E. BOGAN,7 EUGENE V. COAN,8 JOHN C. W. COPE,9 SIMON M. CRAgg,10 JOSÉ R. GARCÍA-MARCH,11 JØRGEN HYLLEBERG,12 PATRICIA KELLEY,13 KARL KLEEMAnn,14 JIřÍ KřÍž,15 CHRISTOPHER MCROBERTS,16 PAULA M. MIKKELSEN,17 JOHN POJETA, JR.,18 PETER W. SKELTON,19 ILYA TËMKIN,20 THOMAS YAncEY,21 and ALEXANDRA ZIERITZ22 [1University of North Carolina, Chapel Hill, USA, [email protected]; 2University of South Florida, Tampa, USA, [email protected], [email protected]; 3Institut Català de Paleontologia (ICP), Catalunya, Spain, [email protected], [email protected]; 4Field Museum of Natural History, Chicago, USA, [email protected]; 5South Dakota School of Mines and Technology, Rapid City, [email protected]; 6Field Museum of Natural History, Chicago, USA, [email protected]; 7North
    [Show full text]
  • · Atlas of the Biology and Distribution of the Sea Scallop Placopecten Magellanicus and Iceland Scallop Chlamys Islandica ' in the Northwest Atlantic
    · Atlas of the biology and distribution of the Sea scallop Placopecten magellanicus and Iceland scallop Chlamys islandica ' in the Northwest Atlantic G.A.P. Black, R.K. Mohn, G. Robert, and M.J. Tremblay Benthic Fisheries and Aquaculture Division Biological Sciences Branch Department of Fisheries and Oceans P.O. Box 550 Halifax, Nova Scotia B3J 2S7 1993 Canadian Technical Report of Fisheries and Aquatic Sciences No. 1915 Fisheries and Environment Pkhes et Enviromement .+ Canada Canada Fisheries Service des pkhes and Marine Service et de Ia mer Fisheries and Marine Service Technical Reports These reports contain scientific and technical information that represents an important contribution to existing knowledge but which for some reason may not be appropriate for primary scientific (i.e. Journal) publication. Technical Reports are directed primarily towards a world wide audience and have an international distribution. No restriction is placed on subject matter and the series reflects the broad interests and policies of the Fisheries and Marine Service, namely, fisheries management, technology and development, ocean sciences, and aquatic environ­ ments relevant to Canada. Technical Reports may be cited as full publications. The correct citation appears above the abstract of each report. Each report will be abstracted in Aquatic Sciences and Fisheries Abstracts and will be indexed annually in the Service's index to scientific and technical publications. Numbers 1-456 in this series were issued as Technical Reports of the Fisheries Research Board of Canada. Numbers 457-714 were issued as Department of the Environment, Fisheries and Marine Service, Research and Development Director­ ate Technical Reports. The series name was changed with report number 715.
    [Show full text]
  • EOAR-Raport Tech-Bibliothèque
    Estuary and Gulf of St. Lawrence Marine EEEcosystemEcosystem OOOverviewOverview and AAAssessmentAssessment RRReportReport R. Dufour and P. Ouellet (editors) Science Branch Department of Fisheries and Oceans Maurice–Lamontagne Institut 850, route de la Mer Mont–Joli (Québec) G5H 3Z4 2007 Canadian Technical Report of Fisheries and Aquatic Sciences 2744E Canadian Technical Report of Fisheries and Aquatic Sciences Technical reports contain scientific and technical information that contributes to existing knowledge but which is not normally appropriate for primary literature. Technical reports are directed primarily toward a worldwide audience and have an international distribution. No restriction is placed on subject matter and the series reflects the broad interests and policies of Fisheries and Oceans Canada, namely, fisheries and aquatic sciences. Technical reports may be cited as full publications. The correct citation appears above the abstract of each report. Each report is abstracted in the data base Aquatic Sciences and Fisheries Abstracts . Technical reports are produced regionally but are numbered nationally. Requests for individual reports will be filled by the issuing establishment listed on the front cover and title page. Numbers 1-456 in this series were issued as Technical Reports of the Fisheries Research Board of Canada. Numbers 457-714 were issued as Department of the Environment, Fisheries and Marine Service, Research and Development Directorate Technical Reports. Numbers 715-924 were issued as Department of Fisheries and Environment, Fisheries and Marine Service Technical Reports. The current series name was changed with report number 925. Rapport technique canadien des sciences halieutiques et aquatiques Les rapports techniques contiennent des renseignements scientifiques et techniques qui constituent une contribution aux connaissances actuelles, mais qui ne sont pas normalement appropriés pour la publication dans un journal scientifique.
    [Show full text]
  • 1 the Gene-Rich Genome of the Scallop Pecten Maximus Nathan J Kenny1,2, Shane a Mccarthy3, Olga Dudchenko4,5, Katherine James1,6
    bioRxiv preprint doi: https://doi.org/10.1101/2020.01.08.887828; this version posted January 9, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. The Gene-Rich Genome of the Scallop Pecten maximus Nathan J Kenny1,2, Shane A McCarthy3, Olga Dudchenko4,5, Katherine James1,6, Emma Betteridge7, Craig Corton7, Jale Dolucan7,8, Dan Mead7, Karen Oliver7, Arina D Omer4, Sarah Pelan7, Yan Ryan9,10, Ying Sims7, Jason Skelton7, Michelle Smith7, James Torrance7, David Weisz4, Anil Wipat9, Erez L Aiden4,5,11,12, Kerstin Howe7, Suzanne T Williams1* 1 Natural History Museum, Department of Life Sciences, Cromwell Road, London SW7 5BD, UK 2 Present address: Oxford Brookes University, Headington Rd, Oxford OX3 0BP, UK 3 Department of Genetics, University of Cambridge, Cambridge, CB2 3EH, UK 4 The Center for Genome Architecture, Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA 5 The Center for Theoretical Biological Physics, Rice University, Houston, TX, USA 6 Present address: Department of Applied Sciences, Faculty of Health and Life Sciences, Northumbria University, Newcastle upon Tyne NE1 8ST UK 7 Wellcome Sanger Institute, Cambridge CB10 1SA, UK 8 Present address: Freeline Therapeutics Limited, Stevenage Bioscience Catalyst, Gunnels Wood Road, Stevenage, Hertfordshire, SG1 2FX, UK 9 School of Computing, Newcastle University, Newcastle upon Tyne NE1 7RU, UK 10 Institute of Infection and Global Health, Liverpool University, iC2, 146 Brownlow Hill, L3 5RF 11 Shanghai Institute for Advanced Immunochemical Studies, ShanghaiTech University, Shanghai, China 12 School of Agriculture and Environment, University of Western Australia, Perth, Australia *Corresponding Author: [email protected] 1 bioRxiv preprint doi: https://doi.org/10.1101/2020.01.08.887828; this version posted January 9, 2020.
    [Show full text]
  • Arctica Islandica) from the Northwestern Atlantic Ocean ⁎ Sara M
    Journal of Experimental Marine Biology and Ecology 503 (2018) 8–22 Contents lists available at ScienceDirect Journal of Experimental Marine Biology and Ecology journal homepage: www.elsevier.com/locate/jembe Two-hundred year record of increasing growth rates for ocean quahogs T (Arctica islandica) from the northwestern Atlantic Ocean ⁎ Sara M. Pacea, , Eric N. Powella, Roger Mannb a Gulf Coast Research Laboratory, University of Southern Mississippi, 703 East Beach Drive, Ocean Springs, MS 39564, United States b Virginia Institute of Marine Science, The College of William and Mary, Rt. 1208 Greate Road, Gloucester Point, VA 23062-1346, United States ARTICLE INFO ABSTRACT Keywords: Ocean quahogs [Arctica islandica (Linnaeus, 1769)] are the longest-lived, non-colonial animal known today, with Ocean quahog a maximum life span exceeding 500 years. Ocean quahogs are a commercially important bivalve, inhabiting the Arctica islandica continental shelf of the North Atlantic basin. We examined growth rates of ocean quahogs that were fully re- Growth cruited to the commercial fishery (> 80-mm shell length) from four sites covering the range of the stock along Little Ice Age the east coast of the U.S. through analysis of annual growth lines in the hinge plate. Both geographic and Climate change temporal differences (on a scale of decadal or longer) in growth rates exist throughout the range of the stock. The age at which animals reached 60, 80, and 90 mm decreased significantly, and average growth rates to 60, 80, and 90 mm increased significantly with birth year at a New Jersey and a Long Island site, both located in the southwestern portion of the stock, since the late 1700s/early 1800s, likely in response to increasing bottom water temperatures.
    [Show full text]
  • Morphological Convergence of Shell Shape in Distantly Related Scallop Species (Mollusca: Pectinidae)
    Whittier College Poet Commons Biology Faculty Publications & Research 2011 Morphological convergence of shell shape in distantly related scallop species (Mollusca: Pectinidae) Alvin Alejandrino [email protected] Jeanne M. Serb Erik Otárola-Castillo Dean C. Adams Follow this and additional works at: https://poetcommons.whittier.edu/bio Part of the Biology Commons Recommended Citation Serb, J. M., Alejandrino, A., Otarola-Castillo, E., & Adams, D. C. (2011). Morphological convergence of shell shape in distantly related scallop species (Mollusca: Pectinidae). Zoological Journal of the Linnean Society, 163(2), 571-584. https://doi.org/10.1111/j.1096-3642.2011.00707.x This Article is brought to you for free and open access by the Faculty Publications & Research at Poet Commons. It has been accepted for inclusion in Biology by an authorized administrator of Poet Commons. For more information, please contact [email protected]. Zoological Journal of the Linnean Society, 2011, 163, 571–584. With 3 figures Morphological convergence of shell shape in distantly related scallop species (Mollusca: Pectinidae) Downloaded from https://academic.oup.com/zoolinnean/article/163/2/571/2625596 by Whittier College user on 17 September 2020 JEANNE M. SERB1*, ALVIN ALEJANDRINO1, ERIK OTÁROLA-CASTILLO1 and DEAN C. ADAMS1,2 1Department of Ecology, Evolution, and Organismal Biology, Iowa State University, Ames, IA 50011, USA 2Department of Statistics, Iowa State University, Ames, IA 50011, USA Received 3 June 2010; revised 3 October 2010; accepted for publication 4 October 2010 Morphological convergence is a central concept in evolutionary biology, but convergent patterns remain under- studied in nonvertebrate organisms. Some scallop species exhibit long-distance swimming, a behaviour whose biomechanical requirements probably generate similar selective regimes.
    [Show full text]
  • Not to Be Cited Without Prior Reference to the Author(S)
    NOT TO BE CITED WITHOUT PRIOR REFERENCE TO THE AUTHOR(S) Northwest Atlantic Fisheries Organization Serial No. N7149 NAFO SCR Doc. 20/071 Kernel Density Analysis and Mapping of Ecosystem Functions in the NAFO Regulatory Area by E. Kenchington1, C. Lirette1, F.J. Murillo1, A.-L. Downie2, A. Kenny2, M. Koen-Alonso3, Mar Sacau Cuadrado4, Hannah Munro3 1Department of Fisheries and Oceans, Dartmouth, Nova Scotia, Canada. 2CEFAS, Lowestoft , Suffolk, United Kingdom. 3Department of Fisheries and Oceans, St. John’s, Newfoundland and Labrador, Canada. 4Institute of Spanish Oceanography, Vigo, Spain. Abstract In support of the 2021/2022 NAFO review of the closed areas to protect vulnerable marine ecosystems (VMEs) in the NAFO Regulatory Area, previously established kernel density estimation (KDE) methods were applied to four important ecological functions provided by benthic communities: A) Bioturbation; B) Nutrient cycling; C) Habitat provision; and D) Functional diversity (FRic), in order to evaluate significant adverse impacts of NAFO bottom-contact fishing on vulnerable marine ecosystems against the wider benthic contributions to those functions. Fish and invertebrate species recorded in the EU and Canadian surveys from 2011-2019 were classified a priori as contributing to each of bioturbation, nutrient cycling and habitat provision functions, using literature references. The resultant catch biomass data for each function were examined using K-S statistics and cumulative biomass distribution plots to determine whether data from the different surveys could be combined. With few exceptions the surveys were analyzed separately and the KDE polygons overlain a posteriori to produce combined polygon areas for each function. A suite of species were important contributors to the biomass of catches used to delineate each of the KDE polygons.
    [Show full text]
  • Effets Sous-Létaux Sur La Moule Bleue (Mytilus Edulis) Et Sa Progéniture D'une Exposition Chronique À Trois Pétroles (Classiques Et Bitumes Dilués) En Condition Hivernale Avec Couvert
    Effets sous-létaux sur la Moule bleue (Mytilus edulis) et sa progéniture d’une exposition chronique à trois pétroles (classiques et bitumes dilués) en condition hivernale avec couvert de glace Mémoire présenté dans le cadre du programme de maîtrise en océanographie en vue de l’obtention du grade de Maître ès sciences (M.Sc.) PAR © ANTHONY SCHMUTZ [décembre 2018] ii Composition du jury : Zhe Lu, président du jury, Université du Québec à Rimouski Richard St-Louis, directeur de recherche, Université du Québec à Rimouski Réjean Tremblay, codirecteur de recherche, Université du Québec à Rimouski Luc Comeau, examinateur externe, ministère pêches et océans Canada, Moncton Dépôt initial le 13 août 2018 Dépôt final le 5 décembre 2018 iv UNIVERSITÉ DU QUÉBEC À RIMOUSKI Service de la bibliothèque Avertissement La diffusion de ce mémoire ou de cette thèse se fait dans le respect des droits de son auteur, qui a signé le formulaire « Autorisation de reproduire et de diffuser un rapport, un mémoire ou une thèse ». En signant ce formulaire, l’auteur concède à l’Université du Québec à Rimouski une licence non exclusive d’utilisation et de publication de la totalité ou d’une partie importante de son travail de recherche pour des fins pédagogiques et non commerciales. Plus précisément, l’auteur autorise l’Université du Québec à Rimouski à reproduire, diffuser, prêter, distribuer ou vendre des copies de son travail de recherche à des fins non commerciales sur quelque support que ce soit, y compris l’Internet. Cette licence et cette autorisation n’entraînent pas une renonciation de la part de l’auteur à ses droits moraux ni à ses droits de propriété intellectuelle.
    [Show full text]
  • Convergent Evolution of Life Habit and Shell Shape in Scallops (Bivalvia: Pectinidae) with a Description of a New Genus Alvin Alejandrino Iowa State University
    Iowa State University Capstones, Theses and Graduate Theses and Dissertations Dissertations 2014 Convergent evolution of life habit and shell shape in scallops (Bivalvia: Pectinidae) with a description of a new genus Alvin Alejandrino Iowa State University Follow this and additional works at: https://lib.dr.iastate.edu/etd Part of the Biology Commons, and the Evolution Commons Recommended Citation Alejandrino, Alvin, "Convergent evolution of life habit and shell shape in scallops (Bivalvia: Pectinidae) with a description of a new genus" (2014). Graduate Theses and Dissertations. 14056. https://lib.dr.iastate.edu/etd/14056 This Dissertation is brought to you for free and open access by the Iowa State University Capstones, Theses and Dissertations at Iowa State University Digital Repository. It has been accepted for inclusion in Graduate Theses and Dissertations by an authorized administrator of Iowa State University Digital Repository. For more information, please contact [email protected]. Convergent evolution of life habit and shell shape in scallops (Bivalvia: Pectinidae) with a description of a new genus by Alvin Alejandrino A dissertation submitted to the graduate faculty in partial fulfillment of the requirements for the degree of DOCTOR OF PHILOSOPHY Major: Ecology and Evolutionary Biology i Program of Study Committee: Jeanne M. Serb, Major Professor Dean C. Adams Dennis Lavrov Nicole Valenzuela Kevin J. Roe Iowa State University Ames, Iowa 2014 Copyright © Alvin Alejandrino, 2014. All rights reserved. ii DEDICATION To my brother, Edward Andrew Haffner (May 19, 1986 – December 26, 2011). You showed me that family and happiness are the most important things in life. I miss and love you.
    [Show full text]
  • B.B. POLAR Research Project Proposed to the TOTAL Foundation Laurent CHAUVAUD LEMAR UMR6539
    Formulaire de proposition de projet 2012 Programmes Biodiversité Date :15/10/2012 Project proposal application 2012 Biodiversity programs Nombre de pages: 13 PAN-ARCTIC BIVALVES AS POLAR BIOARCHIVES BIVALVES PAN-ARCTIQUES COMME BIOARCHIVES POLAIRES B.B. POLAR Research project proposed to the TOTAL Foundation Laurent CHAUVAUD LEMAR UMR6539 1 PARTNER Institution/university: Laboratoire des Sciences de l'Environnement Marin (LEMAR UMR6539) Institut Universitaire Européen de la Mer Université de Bretagne Occidentale Name: Laurent CHAUVAUD Address: Institut Universitaire Européen de la Mer LEMAR UMR6539 Rue Dumont d'Urville 29280 Plouzané France Phone: 02.98.49.86.33 E-mail address: [email protected] PROJECT DESCRIPTION Abstract (300 words): In the B.B. polar project, we propose a scientific project using marine invertebrates as biological archives of the Arctic environmental variations. Tools will be implemented to monitor environmental parameters of the Arctic ecosystem at different time scales (from the daily to the decadal scales) by using two bivalves species, Chlamys islandica and Astarte spp., and at different spatial scales (from the single fjord to a pan-arctic view). Moreover, research in ecology will serve the visual and plastic design. This project will be the occasion for scientists and artists to work together around the climate change issues, transgressing the limits of each discipline. Keywords: Arctic bivalves; climate; growth; proxy; biology; marine ecology 2 PAN-ARCTIC BIVALVES AS POLAR BIOARCHIVES BIVALVES PAN-ARCTIQUES COMME BIOARCHIVES POLAIRES B.B. POLAR Context and issues: Research to calibrate Arctic bivalves as indicators of environmental variations has been underway for the last decade. In the Observatory at the European Institute of Marine Studies (IUEM), we have demonstrated since 1994 that the King scallop (Pecten maximus) provides exceptional biological archives of the temperate environment1.
    [Show full text]
  • Chlamys Varia (Bivalvia: Pectinidae)
    MARINE ECOLOGY PROGRESS SERIES Vol. 18: 253-262,1984 - Published August 15 Mar. Ecol. Prog. Ser. Energetic parameters of a population of Chlamys varia (Bivalvia: Pectinidae) M. S. Shafeel and G.Conan2 * Section Halieutique Institut Agronomique et Veterinaire Hassan 11, B.P.: 6202, Rabat-Instituts Rabat, Morocco Centre de Recherche en Biologic Marine, Universite de Moncton, Moncton, N. B. E1A 349, Canada ABSTRACT: Energy relations of a population of black scallop Chlamys varia (L.) in Lanveoc (Bay of Brest, France) were studied from 1976 to 1978. The population had a production of 538.52 Kcall00 mu' and of 497.10 Kcal 100 m"' during the years 1976 to 77 and 1977 to 78, respectively; it assimilated 5773.21 Kcal 100 m-' during the first year and 4561.21 Kcal 100 m"' during the second year of this study. Net production efficiency of black scallops (9 to 12 %) was very low compared to that of other bivalve populations reported so far. Average annual biomass of the population studied was 1252.59 Kcal 100 m-2 and 956.06 Kcal during the 2 yr period of study. Considerable energy was eliminated by the population due to mortality (natural and fishing mortality): 1017.42 Kcall00 m2and 939.51 Kcal 100 m2during the first and second second year, respectively. Average P:B ratios were 0.43 and 0.52 during the 2 yr. INTRODUCTION the period of this study (1976-1979) scallops were commericially fished every year 3 times a week from The black scallop Chlamys varia (L.), a pectinid October to March. lamellibranch, is common to Atlantic coasts of France The population studied was subtidal.
    [Show full text]
  • Borror's Species Checklist for the Isles of Shoals Archipelago
    Borror’s Species Checklist for the Isles of Shoals Archipelago May 2009 Edition Meg N. Eastwood, Kipp Quinby, Robin Hadlock Seeley, Christine Bogdanowicz, Hal Weeks, and William E. Bemis Borror’s Species Checklist for Shoals Marine Laboratory May 2009 Edition Meg Eastwood, Kipp Quinby, Christine Bogdanowicz, Robin Hadlock Seeley, Hal Weeks, and William E. Bemis Shoals Marine Laboratory Morse Hall, Suite 113 8 College Road Durham, NH, 03824 Send suggestions for improvements to: [email protected] File Name: SML_Checklist_05_2009.docx Last Saved Date: 5/15/09 12:38 PM TABLE OF CONTENTS TABLE OF CONTENTS i INTRODUCTION TO 2009 REVISION 1 PREFACE TO THE 1995 EDITION BY ARTHUR C. BORROR 3 CYANOBACTERIA 5 Phylum Cyanophyta 5 Class Cyanophyceae 5 Order Chroococcales 5 Order Nostocales 5 Order Oscillatoriales 5 DINOFLAGELLATES 5 Phylum Pyrrophyta 5 Class Dinophyceae 5 Order Dinophysiales 5 Order Gymnodiniales 5 Order Peridiniales 5 DIATOMS 5 Phylum Bacillariophyta 5 Class Bacillariophyceae 5 Order Bacillariales 5 Class Coscinodiscophyceae 5 Order Achnanthales 5 Order Biddulphiales 5 Order Chaetocerotales 5 Order Coscinodiscales 6 Order Lithodesmidales 6 Order Naviculales 6 Order Rhizosoleniales 6 Order Thalassiosirales 6 Class Fragilariophyceae 6 Order Fragilariales 6 Order Rhabdonematales 6 ALGAE 6 Phylum Heterokontophyta 6 Class Phaeophyceae 6 Order Chordariales 6 Order Desmarestiales 6 Order Dictyosiphonales 6 Order Ectocarpales 7 Order Fucales 7 Order Laminariales 7 Order Scytosiphonales 8 Order Sphacelariales 8 Phylum Rhodophyta 8 Class Rhodophyceae
    [Show full text]