Yellow Sac Spider Cheira
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Genomanalyse Von Prodiamesa Olivacea
Genomanalyse von Prodiamesa olivacea Dissertation zur Erlangung des Grades Doktor der Naturwissenschaften (Dr. rer. nat.) am Fachbereich Biologie der Johannes Gutenberg-Universität in Mainz Sarah Brunck geb. 08.08.1987 in Mainz Mainz, 2016 Dekan: 1. Berichterstatter: 2. Berichterstatter: Tag der mündlichen Prüfung: ii Inhaltsverzeichnis Inhaltsverzeichnis ................................................................................................................................ iii 1 Einleitung ........................................................................................................................................... 1 1.1 Die Familie der Chironomiden ................................................................................................. 1 1.1.1 Die Gattung Chironomus ..................................................................................................... 3 1.1.2 Die Gattung Prodiamesa ....................................................................................................... 6 1.2 Die Struktur von Insekten-Genomen am Beispiel der Chironomiden ............................... 9 1.2.1 Hochrepetitive DNA-Sequenzen ..................................................................................... 11 1.2.2 Mittelrepetitive DNA-Sequenzen bzw. Gen-Familien ................................................. 13 1.2.3 Gene und genregulatorische Sequenzen ........................................................................ 17 1.3 Zielsetzung ............................................................................................................................... -
Chironomidae Hirschkopf
Literatur Chironomidae Gesäuse U.A. zur Bestimmung und Ermittlung der Autökologie herangezogene Literatur: Albu, P. (1972): Două specii de Chironomide noi pentru ştiinţă în masivul Retezat.- St. şi Cerc. Biol., Seria Zoologie, 24: 15-20. Andersen, T.; Mendes, H.F. (2002): Neotropical and Mexican Mesosmittia Brundin, with the description of four new species (Insecta, Diptera, Chironomidae).- Spixiana, 25(2): 141-155. Andersen, T.; Sæther, O.A. (1993): Lerheimia, a new genus of Orthocladiinae from Africa (Diptera: Chironomidae).- Spixiana, 16: 105-112. Andersen, T.; Sæther, O.A.; Mendes, H.F. (2010): Neotropical Allocladius Kieffer, 1913 and Pseudosmittia Edwards, 1932 (Diptera: Chironomidae).- Zootaxa, 2472: 1-77. Baranov, V.A. (2011): New and rare species of Orthocladiinae (Diptera, Chironomidae) from the Crimea, Ukraine.- Vestnik zoologii, 45(5): 405-410. Boggero, A.; Zaupa, S.; Rossaro, B. (2014): Pseudosmittia fabioi sp. n., a new species from Sardinia (Diptera: Chironomidae, Orthocladiinae).- Journal of Entomological and Acarological Research, [S.l.],46(1): 1-5. Brundin, L. (1947): Zur Kenntnis der schwedischen Chironomiden.- Arkiv för Zoologi, 39 A(3): 1- 95. Brundin, L. (1956): Zur Systematik der Orthocladiinae (Dipt. Chironomidae).- Rep. Inst. Freshwat. Drottningholm 37: 5-185. Casas, J.J.; Laville, H. (1990): Micropsectra seguyi, n. sp. du groupe attenuata Reiss (Diptera: Chironomidae) de la Sierra Nevada (Espagne).- Annls Soc. ent. Fr. (N.S.), 26(3): 421-425. Caspers, N. (1983): Chironomiden-Emergenz zweier Lunzer Bäche, 1972.- Arch. Hydrobiol. Suppl. 65: 484-549. Caspers, N. (1987): Chaetocladius insolitus sp. n. (Diptera: Chironomidae) from Lunz, Austria. In: Saether, O.A. (Ed.): A conspectus of contemporary studies in Chironomidae (Diptera). -
Ohio EPA Macroinvertebrate Taxonomic Level December 2019 1 Table 1. Current Taxonomic Keys and the Level of Taxonomy Routinely U
Ohio EPA Macroinvertebrate Taxonomic Level December 2019 Table 1. Current taxonomic keys and the level of taxonomy routinely used by the Ohio EPA in streams and rivers for various macroinvertebrate taxonomic classifications. Genera that are reasonably considered to be monotypic in Ohio are also listed. Taxon Subtaxon Taxonomic Level Taxonomic Key(ies) Species Pennak 1989, Thorp & Rogers 2016 Porifera If no gemmules are present identify to family (Spongillidae). Genus Thorp & Rogers 2016 Cnidaria monotypic genera: Cordylophora caspia and Craspedacusta sowerbii Platyhelminthes Class (Turbellaria) Thorp & Rogers 2016 Nemertea Phylum (Nemertea) Thorp & Rogers 2016 Phylum (Nematomorpha) Thorp & Rogers 2016 Nematomorpha Paragordius varius monotypic genus Thorp & Rogers 2016 Genus Thorp & Rogers 2016 Ectoprocta monotypic genera: Cristatella mucedo, Hyalinella punctata, Lophopodella carteri, Paludicella articulata, Pectinatella magnifica, Pottsiella erecta Entoprocta Urnatella gracilis monotypic genus Thorp & Rogers 2016 Polychaeta Class (Polychaeta) Thorp & Rogers 2016 Annelida Oligochaeta Subclass (Oligochaeta) Thorp & Rogers 2016 Hirudinida Species Klemm 1982, Klemm et al. 2015 Anostraca Species Thorp & Rogers 2016 Species (Lynceus Laevicaudata Thorp & Rogers 2016 brachyurus) Spinicaudata Genus Thorp & Rogers 2016 Williams 1972, Thorp & Rogers Isopoda Genus 2016 Holsinger 1972, Thorp & Rogers Amphipoda Genus 2016 Gammaridae: Gammarus Species Holsinger 1972 Crustacea monotypic genera: Apocorophium lacustre, Echinogammarus ischnus, Synurella dentata Species (Taphromysis Mysida Thorp & Rogers 2016 louisianae) Crocker & Barr 1968; Jezerinac 1993, 1995; Jezerinac & Thoma 1984; Taylor 2000; Thoma et al. Cambaridae Species 2005; Thoma & Stocker 2009; Crandall & De Grave 2017; Glon et al. 2018 Species (Palaemon Pennak 1989, Palaemonidae kadiakensis) Thorp & Rogers 2016 1 Ohio EPA Macroinvertebrate Taxonomic Level December 2019 Taxon Subtaxon Taxonomic Level Taxonomic Key(ies) Informal grouping of the Arachnida Hydrachnidia Smith 2001 water mites Genus Morse et al. -
DNA Barcoding
Full-time PhD studies of Ecology and Environmental Protection Piotr Gadawski Species diversity and origin of non-biting midges (Chironomidae) from a geologically young lake PhD Thesis and its old spring system Performed in Department of Invertebrate Zoology and Hydrobiology in Institute of Ecology and Environmental Protection Różnorodność gatunkowa i pochodzenie fauny Supervisor: ochotkowatych (Chironomidae) z geologicznie Prof. dr hab. Michał Grabowski młodego jeziora i starego systemu źródlisk Auxiliary supervisor: Dr. Matteo Montagna, Assoc. Prof. Łódź, 2020 Łódź, 2020 Table of contents Acknowledgements ..........................................................................................................3 Summary ...........................................................................................................................4 General introduction .........................................................................................................6 Skadar Lake ...................................................................................................................7 Chironomidae ..............................................................................................................10 Species concept and integrative taxonomy .................................................................12 DNA barcoding ...........................................................................................................14 Chapter I. First insight into the diversity and ecology of non-biting midges (Diptera: Chironomidae) -
Genomic Platforms and Molecular Physiology of Insect Stress Tolerance
Genomic Platforms and Molecular Physiology of Insect Stress Tolerance DISSERTATION Presented in Partial Fulfillment of the Requirements for the Degree Doctor of Philosophy in the Graduate School of The Ohio State University By Justin Peyton MS Graduate Program in Evolution, Ecology and Organismal Biology The Ohio State University 2015 Dissertation Committee: Professor David L. Denlinger Advisor Professor Zakee L. Sabree Professor Amanda A. Simcox Professor Joseph B. Williams Copyright by Justin Tyler Peyton 2015 Abstract As ectotherms with high surface area to volume ratio, insects are particularly susceptible to desiccation and low temperature stress. In this dissertation, I examine the molecular underpinnings of two facets of these stresses: rapid cold hardening and cryoprotective dehydration. Rapid cold hardening (RCH) is an insect’s ability to prepare for cold stress when that stress is preceded by an intermediate temperature for minutes to hours. In order to gain a better understanding of cold shock, recovery from cold shock, and RCH in Sarcophaga bullata I examine the transcriptome with microarray and the metabolome with gas chromatography coupled with mass spectrometry (GCMS) in response to these treatments. I found that RCH has very little effect on the transcriptome, but results in a shift from aerobic metabolism to glycolysis/gluconeogenesis during RCH and preserved metabolic homeostasis during recovery. In cryoprotective dehydration (CD), a moisture gradient is established between external ice and the moisture in the body of an insect. As temperatures decline, the external ice crystals grow, drawing in more moisture which dehydrates the insect causing its melting point to track the ambient temperature. To gain a better understanding of CD and dehydration in Belgica antarctica I explore the transcriptome with RNA sequencing ii and the metabolome with GCMS. -
National Park Service
Communities in Freshwater Coastal Rock Pools of Lake Superior, with a Focus on Chironomidae (Diptera) A Dissertation SUBMITTED TO THE FACULTY OF UNIVERSITY OF MINNESOTA BY Alexander Taurus Egan IN PARTIAL FULFILLMENT OF THE REQUIREMENTS FOR THE DEGREE OF DOCTOR OF PHILOSOPHY Advisor: Leonard C. Ferrington, Jr. May 2014 © Alexander Taurus Egan 2014 Acknowledgements Projects of this size are rarely accomplished without the assistance and support of many people. Primarily, my advisor, Len Ferrington, has been a great source of guidance and enthusiasm. My committee, Jacques Finlay, Ralph Holzenthal, and Roger Moon, have raised the bar considerably by pushing, pulling and steering me toward being a better scientist. Friends and colleagues in the Chironomidae Research Group have made my graduate experience a time I will remember fondly, with Alyssa Anderson, Will Bouchard and Jessica Miller sharing in the successes, misfortunes, and minor but important goals that come with the territory. In particular, Petra Kranzfelder often filled the roles of peer advisor and sounding board for ideas both brilliant and ridiculous. The National Park service has been very generous in many ways, and specific thanks go to Brenda Moraska Lafrançois and Jay Glase, who provided early development and direction for this project. My colleagues Mark Edlund from the Science Museum of Minnesota and Toben Lafrançois from the Science Museum and Northland College have consistently offered excellent ecological advice on what the data mean, often acting as de facto advisors. Without support from Isle Royale National Park this project would not have been possible. In particular, the technical advice, equipment loans, and logistical assistance from Paul Brown, Rick Damstra, Joan Elias, and Mark Romanski were invaluable. -
12 List of Aquatic Insect Species in Baltic Amber
12 List of aquatic insect species in Baltic amber Odonata Epallagidae Litheuphaea ludwigi BECHLY , 1998 Platycnemidae Platycnemis antiqua (PICTET & HAGEN , 1856) Syn.: Agrion antiquum PICTET & HAGEN , 1856 Thaumatoneuridae Electrophenacolestes serafini NEL & ARILLO , 2006 Amphipterygida Pamita hannahdaltonae MAY & CARLE , 2005 Ephemeroptera Acanthametropodidae Analetris secundus GODUNKO & Kł o n o w s K a -ol e j n i K , 2006 Ameletidae Baltameletus oligocaenicus DE M OULIN , 1968 Electroletus soldani GODUNKO & NEU M ANN , 2006 Ameletopsidae Balticophlebia hennigi DE M OULIN , 1968 Ametropodidae Brevitibia intricans DE M OULIN , 1968 Babidae Baba lapidea KLUGE , GODUNKO & Kr z e m i ń s K i , 2006 Baetiscidae Balticobaetisca velteni st a n i c z e K & BECHLY , 2002 Baetidae Baetis anomala PICTET , 1856 Baetis gigantea HAGEN , 1856 Baetis grossa HAGEN , 1856 Baetis longipes HAGEN , 1856 290 Siphlonuridae Metretopus henningseni DE M OULIN , 1965 Metretopus trinervis DE M OULIN , 1968 Siphloplecton jaegeri DE M OULIN , 1968 Siphloplecton macrops (PICTET , 1856) Siphlonurus dubiosus DE M OULIN , 1968 Oligoneuriidae Cronicus anomalus (PICTET , 1856) Cronicus major DE M OULIN , 1968 Arthropleidae Electrogenia dewalschei DE M OULIN , 1956 Heptageniidae Burshtynogena fereci Go d u n K o & so n t a G , 2004 Cinygma? baltica DE M OULIN , 1968 Ecdyonurus (Nestormeus) groehnorum GODUNKO , 2007 Ecdyonurus (Nestormeus) leopoliensis GODUNKO , 2004 Heptagenia atypica DE M OULIN , 1968 Heptagenia bachofeni DE M OULIN , 1968 Heptagenia (Kageronia) fuscogrisea -
Refinement of the Basin-Wide Index of Biotic Integrity for Non-Tidal Streams and Wadeable Rivers in the Chesapeake Bay Watershed
Refinement of the Basin-Wide Index of Biotic Integrity for Non-Tidal Streams and Wadeable Rivers in the Chesapeake Bay Watershed APPENDICES Appendix A: Taxonomic Classification Appendix B: Taxonomic Attributes Appendix C: Taxonomic Standardization Appendix D: Rarefaction Appendix E: Biological Metric Descriptions Appendix F: Abiotic Parameters for Evaluating Stream Environment Appendix G: Stream Classification Appendix H: HUC12 Watershed Characteristics in Bioregions Appendix I: Index Methodologies Appendix J: Scoring Methodologies Appendix K: Index Performance, Accuracy, and Precision Appendix L: Narrative Ratings and Maps of Index Scores Appendix M: Potential Biases in the Regional Index Ratings Appendix Citations Appendix A: Taxonomic Classification All taxa reported in Chessie BIBI database were assigned the appropriate Phylum, Subphylum, Class, Subclass, Order, Suborder, Family, Subfamily, Tribe, and Genus when applicable. A portion of the taxa reported were reported under an invalid name according to the ITIS database. These taxa were subsequently changed to the taxonomic name deemed valid by ITIS. Table A-1. The taxonomic hierarchy of stream macroinvertebrate taxa included in the Chesapeake Bay non-tidal database. -
Appendices Include ICRMP? Comment Involved in the Management ….” Management the in Involved TNARNG
APPENDIX A ENVIRONMENTAL ASSESSMENT FOR THE IMPLEMENTATION OF THE REVISED INTEGRATED NATURAL RESOURCES MANAGEMENT PLAN FOR THE VOLUNTEER TRAINING SITE – CATOOSA TENNESSEE ARMY NATIONAL GUARD CATOOSA COUNTY, GEORGIA PREPARED BY Tennessee Military Department Environmental Office February 2012 Integrated Natural Resources Management Plan A-1 VTS-Catoosa Appendix A Environmental Assessment This page intentionally left blank. Integrated Natural Resources Management Plan A-2 VTS-Catoosa Appendix A Environmental Assessment ENVIRONMENTAL ASSESSMENT FOR IMPLEMENTATION OF THE REVISED INTEGRATED NATURAL RESOURCES MANAGEMENT PLAN, VOLUNTEER TRAINING SITE CATOOSA TENNESSEE ARMY NATIONAL GUARD REVIEWED BY: DATE: __________________________________________ ________________________ TERRY M. HASTON MG, TNARNG The Adjutant General __________________________________________ ________________________ ISAAC G. OSBORNE, JR. BG, TNARNG Assistant Adjutant General, Army __________________________________________ ________________________ DARRELL D. DARNBUSH COL, TNARNG Deputy Chief of Staff, Operations __________________________________________ ________________________ GARY B. HERR LTC, TNARNG Training Site Commander _________________________________________ ________________________ STEPHEN B. LONDON COL, TNARNG Environmental Officer Integrated Natural Resources Management Plan A-3 VTS-Catoosa Appendix A Environmental Assessment Integrated Natural Resources Management Plan A-4 VTS-Catoosa Appendix A Environmental Assessment TABLE OF CONTENTS Table of Contents A-5 -
An Improved Biotic Index of Organic Stream Pollution
The Great Lakes Entomologist Volume 20 Number 1 - Spring 1987 Number 1 - Spring 1987 Article 7 April 1987 An Improved Biotic Index of Organic Stream Pollution William L. Hilsenhoff University of Wisconsin Follow this and additional works at: https://scholar.valpo.edu/tgle Part of the Entomology Commons Recommended Citation Hilsenhoff, William L. 1987. "An Improved Biotic Index of Organic Stream Pollution," The Great Lakes Entomologist, vol 20 (1) Available at: https://scholar.valpo.edu/tgle/vol20/iss1/7 This Peer-Review Article is brought to you for free and open access by the Department of Biology at ValpoScholar. It has been accepted for inclusion in The Great Lakes Entomologist by an authorized administrator of ValpoScholar. For more information, please contact a ValpoScholar staff member at [email protected]. Hilsenhoff: An Improved Biotic Index of Organic Stream Pollution 1987 THE GREAT LAKES ENTOMOLOGIST 31 AN IMPROVED BIOTIC INDEX OF ORGANIC STREAM POLLUTIONl William L. Hilsenhoff2 ABSTRACT Major improvements were made in using a biotic index of the arthropod fauna to evaluate organic stream pollution. All tolerance values were reevaluated, many were changed, and the scale for tolerance values was expanded to 0-10 to provide greatcr precision. Keys to larvae of Ceratopsyche have been developed and tolerance values for species in this important genus are provided. Sorting of samples in the laboratory instead of in the field is recommended, and directions for processing and evaluating samples are included. A "saprobic index" (Pantel and Buck 1955) and a "biotic indcx" (Chutter 1972) werc proposed for evaluating the water quality of streams through a study of their fauna. -
Insects As Indicators of Environmental Changing and Pollution: a Review of Appropriate Species and Their Monitoring
HOLOS Environment, v.10 n.2, 2010 - P. 250 ISSN:1519-8634 (ON-LINE) INSECTS AS INDICATORS OF ENVIRONMENTAL CHANGING AND POLLUTION: A REVIEW OF APPROPRIATE SPECIES AND THEIR MONITORING OS INSETOS INDICADORES DE ALTERAÇÃO E POLUIÇÃO AMBIENTAL: UMA REVISÃO DAS ESPÉCIES ADEQUADAS E DO SEU MONITORAMENTO José Renato Mauricio da Rocha1, Josimar Ribeiro Almeida2, Gustavo Aveiro Lins3, Alberto Durval4 1Universidade Federal de Mato Grosso - UFMT. Rua. Bento Alexandre dos Santos, 717 Centro. CEP 78.280-000, Mirassol D'Oeste, MT 2UFRJ/Escola Politécnica/Cidade Universitária/bloco D/sala 204/Rio de Janeiro, RJ 3CEDERJ, SEE/RJ, CEDAE. Rua Farias Brito 50/104 - CEP 20540320, Rio de Janeiro, RJ 4Universidade Federal de Mato Grosso - UFMT - Rua 213, Quadra 49, n. 13 setor 2 Bairro Tijucal, CEP 78.088-18,5 Cuiabá, MT. ABSTRACT Responses of some species to disturbances can be used as a parameter of analysis about levels of change in the environmental services. These species can be used as environmental bioindicators. Class Insecta has many appropriate species. This paper aims an analysis of bioindicator species of the impact caused by intensive agriculture, deforestation, reforestation and pollution of aquatic and terrestrial environments. Keywords: Bioindicators. Insecta. Environmental polution. Monitoring. RESUMO A resposta de algumas espécies animais e vegetais às perturbações pode ser utilizada como parâmetro de análise quanto aos níveis de alteração do funcionamento dos serviços ambientais, e por isso são consideradas bioindicadoras das alterações ambientais. No entanto, algumas espécies respondem mais fidedignamente do que outras a estas alterações. A classe Insecta possui muitos representantes adequados para este tipo de análise. -
Biological Condition Gradient for Tiered Aquatic Life Uses in New Jersey
BIOLOGICAL CONDITION GRADIENT FOR TIERED AQUATIC LIFE USE IN NEW JERSEY Prepared for: William Swietlik, Work Assignment Manager USEPA OST James Kurtenbach U.S. EPA, Region 2 Kevin Berry New Jersey Department of Environmental Protection Prepared by: Jeroen Gerritsen Erik W. Leppo Tetra Tech, Inc. 400 Red Brook Boulevard, Suite 200 Owings Mills, MD 21117 January 2005 NJ TALU Workshop Documentation EXECUTIVE SUMMARY The objective of the Clean Water Act is to “restore and maintain physical, chemical and biological integrity of the Nation’s waters.” To meet this goal, we need a uniform interpretation of biological condition and operational definitions that are independent of different assessment methodologies. These definitions must be specific, well-defined, and allow for waters of different natural quality and different desired uses. The USEPA has outlined a tiered system of aquatic life use designation, along a gradient (the Biological Condition Gradient, or BCG) that describes how ecological attributes change in response to increasing levels of human disturbance. The Biological Condition Gradient is a conceptual model that describes changes in aquatic communities. It is consistent with ecological theory and has been verified by aquatic biologists throughout the US. Specifically, the BCG describes how ten biological attributes of natural aquatic systems change in response to increasing pollution and disturbance. The ten attributes are in principle measurable, although several are not commonly measured in monitoring programs. The attributes are: 1. Historically documented, sensitive, long-lived or regionally endemic taxa 2. Sensitive and rare taxa 3. Sensitive but ubiquitous taxa 4. Taxa of intermediate tolerance 5. Tolerant taxa 6. Non-native taxa 7.