Appendix C. List of Gene Up-Regulated in Cells Grown As Biofilms. Protein Category GENE NAME Function Foldchange Aveexpr T Raw.P.Val FDR.P.Val

Appendix C. List of gene up-regulated in cells grown as biofilms. Protein category GENE_NAME function FoldChange AveExpr t raw.P.val FDR.P.val

Cell membrane function lmo1934 similar to non-specific DNA-binding protein HU 7.88455731 12.20228 13.74284 5.14E-16 7.69E-13 lmo2016 similar to major cold-shock protein 4.46054486 12.92885 12.4972 9.16E-15 5.06E-12 lmo1847 similar to adhesion binding proteins and lipoproteins with multiple5.10387178 specificity13.71246 for metal 11.18586cations (ABC2.32E-13 transporter)3.31E-11 lmo1548 similar to cell-shape determining protein MreB 3.12698287 13.84029 10.14071 3.58E-12 3.14E-10 lmo1364 similar to cold shock protein 3.21172011 12.68556 10.03885 4.71E-12 3.63E-10 lmo1547 similar to cell-shape determining protein MreC 3.25276936 13.32978 10.03399 4.77E-12 3.63E-10 lmo0971 DltD protein for D-alanine esterification of lipoteichoic acid and3.42366229 wall teichoic13.88932 acid 9.280949 3.77E-11 2.29E-09 lmo0973 DltB protein for D-alanine esterification of lipoteichoic acid and3.07776803 wall teichoic14.47105 acid 8.732509 1.78E-10 8.18E-09 lmo1546 similar to cell-shape determining protein MreD 3.22349266 12.61449 8.053721 1.28E-09 4.49E-08 lmo0045 highly similar to single-strand binding protein (SSB) 3.27406859 14.06565 7.792284 2.78E-09 8.59E-08 lmo1527 similar to protein-export membrane protein SecDF 2.46823503 13.93627 6.263443 2.90E-07 4.75E-06 lmo2637 conserved lipoprotein 3.67182434 14.17184 6.07871 5.14E-07 7.35E-06 lmo0927 hypothetical transmembrane protein 2.09623116 13.21212 5.573679 2.46E-06 2.63E-05 lmo0433 Internalin A 2.56964009 13.47947 5.227844 7.18E-06 6.25E-05 lmo0514 similar to internalin protein, putative peptidoglycan bound protein-2.4281866 (LPXTG motif)13.10804 -5.11582 1.01E-05 8.18E-05 lmo2007 weakly similar to putative sugar-binding lipoproteins -2.0438021 12.94108 -5.03773 1.29E-05 9.98E-05

Cell metabolic pathways/Biosynthesis lmo2459 glyceraldehyde-3-phosphate dehydrogenase 5.85859635 13.6642 12.4485 1.03E-14 5.06E-12 lmo2533 highly similar to H+transporting ATP synthase chain b 3.99411918 13.78088 12.43334 1.07E-14 5.06E-12 lmo2536 highly similar to ATP synthase subunit i 4.7226599 12.99497 12.07353 2.54E-14 7.24E-12 lmo1083 similar to dTDP-D-glucose 4,6-dehydratase 3.59784501 13.27281 11.94048 3.52E-14 9.11E-12 lmo2456 highly similar to phosphoglycerate mutase; catalyzes the interconversion4.65083394 of 14.234642-phosphoglycerate11.55326 and9.19E-14 3-phosphoglycerate2.01E-11 lmo1806 highly similar to acyl carrier proteins 4.76899981 12.94787 11.35056 1.53E-13 2.72E-11 lmo1634 similar to Alcohol-acetaldehyde dehydrogenase 3.89056269 14.33498 11.22769 2.09E-13 3.27E-11 lmo2535 ATP synthase subunit A 3.84039768 13.96756 10.05301 4.53E-12 3.63E-10 lmo2458 phosphoglycerate kinase 3.91310805 14.30025 9.842171 8.02E-12 5.71E-10 lmo0783 similar to mannose-specific phosphotransferase system (PTS) 3.49454099component IIB13.49287 9.493188 2.09E-11 1.35E-09 lmo1003 PTS enzyme I 3.33203576 13.42775 9.248565 4.13E-11 2.40E-09 lmo1673 naphthoate synthase 3.19751732 13.53146 9.189956 4.87E-11 2.67E-09 lmo1663 similar to asparagine synthetase 2.5480617 13.43093 9.070581 6.82E-11 3.59E-09 lmo2457 highly similar to triose phosphate isomerase 3.69843203 14.64773 9.034993 7.54E-11 3.90E-09 lmo1082 similar to dTDP-sugar epimerase 3.37195644 13.7902 9.025468 7.74E-11 3.93E-09 lmo2455 highly similar to enolase 3.32466943 14.29139 8.746222 1.71E-10 8.13E-09 lmo2532 highly similar to H+transporting ATP synthase chain delta 3.18207364 14.13089 8.603506 2.58E-10 1.15E-08 lmo1084 similar to DTDP-L-rhamnose synthetase 3.17640938 13.25135 8.38256 4.89E-10 2.05E-08 lmo1464 similar to diacylglycerol kinase 2.62456951 13.0846 8.368846 5.09E-10 2.08E-08 lmo1002 PTS phosphocarrier protein Hpr (histidine containing protein) 3.36360858 13.92372 8.233748 7.55E-10 2.87E-08 lmo2530 highly similar to H+transporting ATP synthase chain gamma 3.51851988 14.46209 8.10579 1.10E-09 3.96E-08 lmo2534 ATP synthase subunit C 2.86002223 14.48747 7.933152 1.83E-09 6.05E-08 lmo1052 highly similar to pyruvate dehydrogenase (E1 alpha subunit) 2.68088614 14.05514 7.713303 3.51E-09 1.05E-07 lmo1571 6-phosphofructokinase 2.64472869 13.55894 7.511142 6.43E-09 1.78E-07 lmo1807 similar to 3-ketoacyl-acyl carrier protein reductase 2.58085367 13.78651 7.452592 7.67E-09 2.08E-07 lmo1917 similar to pyruvate formate-lyase 2.82421701 13.76796 7.313418 1.17E-08 3.02E-07 lmo1766 highly similar to phosphoribosylglycinamide formyltransferases4.73956737 10.91891 7.20597 1.61E-08 4.00E-07 lmo1676 menaquinone-specific isochorismate synthase 2.82903464 13.14482 7.161329 1.85E-08 4.46E-07 lmo0974 D-alanine--D-alanyl carrier protein ligase 3.04882149 14.38519 6.903874 4.05E-08 8.93E-07 lmo1406 pyruvate formate-lyase 3.6846588 13.82027 6.596606 1.04E-07 1.98E-06 lmo2635 1,4-dihydroxy-2-naphthoate octaprenyltransferase 2.4811628 12.81699 6.21985 3.32E-07 5.28E-06 lmo1773 adenylosuccinate lyase 3.34172348 12.82735 6.507699 1.37E-07 2.54E-06 lmo1081 similar to glucose-1-phosphate thymidyl transferase 2.55920438 14.08477 6.471138 1.53E-07 2.79E-06 lmo0539 tagatose 1,6-diphosphate aldolase 3.21911471 13.08826 6.390089 1.96E-07 3.47E-06 lmo0096 similar to PTS system mannose-specific, factor IIAB 2.55747356 13.56833 6.348359 2.23E-07 3.83E-06 lmo1675 2-oxoglutarate decarboxylase 2.33356608 13.70316 6.325768 2.39E-07 4.05E-06 lmo1435 dihydrodipicolinate synthase 2.306845 13.73059 6.247713 3.05E-07 4.93E-06 lmo2556 similar to fructose-1,6-bisphosphate aldolase 3.157626 14.48131 6.135191 4.31E-07 6.50E-06 lmo1086 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2.70051147 12.94498 6.101307 4.79E-07 6.99E-06 lmo1521 similar to N-acetylmuramoyl-L-alanine amidase 2.31743329 13.8367 6.07858 5.14E-07 7.35E-06 lmo2559 CTP synthetase 2.46589693 13.94196 6.024906 6.07E-07 8.51E-06 lmo1490 similar to shikimate 5-dehydrogenase (AroD) 2.12582712 13.51149 5.912444 8.60E-07 1.12E-05 lmo1764 phosphoribosylglycinamide synthetase 3.92189369 11.75212 5.884944 9.37E-07 1.19E-05 lmo1313 highly similar to uridylate kinases 2.37160977 13.87908 5.775736 1.31E-06 1.58E-05 lmo1572 highly similar to acetyl CoA carboxylase (alpha subunit); Catalyzes3.23449367 the carboxylation11.63607 of acetyl-CoA5.728176 to1.52E-06 malonyl-CoA1.77E-05 lmo2528 highly similar to H+transporting ATP synthase chain epsilon 1.96740641 13.48736 5.643083 1.98E-06 2.21E-05 lmo2696 similar to hypothetical dihydroxyacetone kinase 2.30080604 13.16061 5.624803 2.10E-06 2.29E-05 lmo1820 similar to putative serine/threonine-specific protein kinase 2.1229096 13.76891 5.607514 2.22E-06 2.40E-05 lmo2529 ATP synthase subunit B 2.15304487 14.81267 5.594445 2.31E-06 2.48E-05 lmo2137 similar to PTS system, fructose-specific enzyme IIA component-2.2812563 12.82015 -5.67064 1.82E-06 2.05E-05 lmo0298 similar to PTS beta-glucoside-specific enzyme IIC component -2.3619881 14.00698 -5.63729 2.02E-06 2.22E-05 lmo0345 similar to sugar-phosphate isomerase -2.5400987 13.61374 -5.59696 2.29E-06 2.47E-05 lmo2134 similar to fructose-1,6-biphosphate aldolase type II -2.2568445 13.50064 -5.5458 2.68E-06 2.82E-05 lmo2717 highly similar to cytochrome D ubiquinol oxidase subunit II 2.1427138 14.31347 5.540592 2.73E-06 2.84E-05 lmo1407 pyruvate-formate lyase activating enzyme 2.20920501 13.47548 5.533843 2.78E-06 2.88E-05 lmo2847 highly similar to rhamnulose-1-phosphate aldolase -2.7161691 14.2083 -5.49977 3.09E-06 3.14E-05 lmo0543 similar to PTS system, glucitol/sorbitol-specific enzyme IIBC component-2.0095442 13.48649 -5.48877 3.20E-06 3.23E-05 lmo1856 purine nucleoside phosphorylase 1.87192731 13.82264 5.472569 3.37E-06 3.37E-05 lmo2135 similar to PTS system, fructose-specific enzyme IIC component-2.4878185 13.83088 -5.44131 3.71E-06 3.64E-05 lmo1034 similar to glycerol kinase -2.2386655 13.35672 -5.43442 3.79E-06 3.71E-05 lmo2683 similar to cellobiose phosphotransferase enzyme IIB component1.98808642 12.25486 5.373264 4.58E-06 4.31E-05 lmo1581 highly similar to acetate kinase; AckA; TdcD; acetate/propionate2.13631679 kinase; TdcD13.68868 has both and5.322325 functions5.36E-06 in anerobic4.86E-05 threonine catabolism; AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conver lmo0210 similar to L-lactate dehydrogenase; catalyzes the conversion of2.76230255 lactate to pyruvate14.44002 5.314529 5.49E-06 4.96E-05 lmo1570 highly similar to pyruvate kinases; catalyzes the formation of phosphoenolpyruvate3.24540277 13.92711 from5.278943 pyruvate 6.13E-06 5.45E-05 lmo1373 similar to branched-chain alpha-keto acid dehydrogenase E1 subunit2.1079549 (2-oxoisovalerate14.39781 dehydrogenase5.187341 8.14E-06 beta subunit)6.77E-05 lmo2531 ATP synthase subunit A 2.62888309 14.64755 5.174596 8.46E-06 7.00E-05 lmo0913 similar to succinate semialdehyde dehydrogenase 2.69510884 13.47991 5.143012 9.33E-06 7.63E-05 lmo1720 similar to PTS lichenan-specific enzyme IIB component 1.98180914 13.49185 5.095068 1.08E-05 8.67E-05 lmo0355 similar to Flavocytochrome C Fumarate Reductase chain A; Reduces2.66433441 fumarate14.45225 to succinate5.064265 in anaerobic1.19E-05 bacterial9.32E-05 respiration lmo2787 beta-glucoside-specific PTS enzyme II ABC component -2.0871064 13.37121 -5.05981 1.21E-05 9.43E-05 lmo0567 highly similar to histidinol dehydrogenases; catalyzes the oxidation-2.02803 of L-histidinol13.68141 to L-histidinaldehyde-5.02384 1.35E-05 and then0.000102 to L-histidine in histidine biosynthesis lmo2336 fructose-1-phosphate kinase -2.0266083 13.34737 -5.01918 1.37E-05 0.000103 lmo2230 similar to arsenate reductase 2.14286132 12.84725 4.94928 1.69E-05 0.000123 lmo0782 similar to mannose-specific PTS component IIC 1.89734883 13.90863 4.805895 2.63E-05 0.000176 lmo1331 polynucleotide phosphorylase (PNPase) 2.01503882 13.13521 4.773971 2.90E-05 0.00019 lmo2201 similar to 3-oxoacyl-acyl-carrier protein synthase 2.08021903 13.49105 4.747275 3.14E-05 0.000205 lmo0097 similar to PTS system mannose-specific, factor IIC 2.1372933 14.19286 4.691499 3.73E-05 0.000232 lmo1363 similar to geranyltranstransferase 1.83449365 13.06041 4.685761 3.79E-05 0.000234 lmo1719 similar to PTS lichenan-specific enzyme IIA component 1.82064992 13.93777 4.684537 3.81E-05 0.000235 lmo0957 similar to glucosamine-6-Phosphate isomerase (EC 5.3.1.10) 2.04120574 13.21382 4.66745 4.01E-05 0.000242 lmo1930 similar to heptaprenyl diphosphate synthase component II (menaquinone1.89043179 biosynthesis)12.44795 4.651747 4.21E-05 0.000253 lmo1677 similar to menaquinone biosynthesis proteins; catalyzes the formation1.86196903 of dimethylmenaquinone12.79828 4.593976 from5.01E-05 1,4-dihydroxy-2-naphthoate0.000289 lmo0931 similar to lipoate protein ligase A 2.03675262 13.26501 4.59386 5.02E-05 0.000289 lmo1524 similar to adenine phosphoribosyltransferase; Catalyzes a salvage1.7818473 reactionresulting11.87048 in the4.552696 formation5.68E-05 of AMPwhich0.00032 is metabolically less costlythan a de novo synthesis lmo1821 similar to putative phosphoprotein phosphatase 1.99318562 13.53296 4.542487 5.86E-05 0.000327 lmo1554 highly similar to delta-aminolevulinic acid dehydratases (porphobilinogen1.67237454 synthase);13.38408 catalyzes4.52191 the formation6.24E-05 of0.000344 porphobilinogen from 5-aminolevulinate lmo1316 similar to phosphatidate cytidylyltransferase (CDP-diglyceride 1.98588797synthase) 12.72682 4.510282 6.46E-05 0.000354 lmo1394 similar to 3-ketoacyl-acyl carrier protein reductase 2.0270249 13.29611 4.50038 6.66E-05 0.000364 lmo0784 similar to mannose-specific PTS component IIA 1.98885902 14.36851 4.451638 7.71E-05 0.000412 lmo2103 similar to phosphotransacetylase; Catalyses the synthesis of acetylphosphate2.07179309 13.63223 from acetyl-CoA4.410546 and inorganic8.73E-05 phosphate0.000459 lmo2168 similar to glyoxalase I 1.7335753 13.561 4.401758 8.96E-05 0.000467 lmo1436 similar to aspartokinase I (alpha and beta subunits); catalyzes 1.72585907the formation of13.989 4-phospho-L-aspartate4.397222 9.08E-05 from L-aspartate0.000471 and ATP lmo2684 similar to cellobiose phosphotransferase enzyme IIC component1.75874408 13.13434 4.382504 9.50E-05 0.000486 lmo2363 similar to glutamate decarboxylase 1.9763317 14.91951 4.327187 0.000112 0.000549 lmo2036 similar to UDP-N-acetylmuramoylalanine D-glutamate ligase; UDP-N-acetylmuramoylalanine--D-glutamate1.67707919 13.63968 4.326437 0.000112 ligase;0.000549 involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation lmo1329 highly similar to riboflavin kinase and FAD synthase 1.99860413 13.06551 4.277388 0.00013 0.000616 lmo1053 highly similar to pyruvate dehydrogenase (E1 beta subunit) 2.61380229 14.6447 4.162671 0.000183 0.000811 lmo0970 similar to enoyl- acyl-carrier protein reductase; Catalyzes a key2.27984241 regulatory step13.12039 in fatty acid4.143708 biosynthesis0.000194 0.00085 lmo1371 similar to branched-chain alpha-keto acid dehydrogenase E3 subunit;1.78228314 Catalyzes14.25402 the oxidation4.101881 of dihydrolipoamide0.000219 0.000944 to lipoamide

Replication, Transcription, Translation lmo2629 50S ribosomal protein L2 5.95147151 13.75681 13.72069 5.40E-16 7.69E-13 lmo2624 ribosomal protein L29 5.2126165 13.62542 12.2954 1.49E-14 5.66E-12 lmo2628 ribosomal protein S19 5.03078211 13.89864 12.08157 2.49E-14 7.24E-12 lmo2610 translation initiation factor IF-1 4.86096406 13.82007 11.81158 4.84E-14 1.15E-11 lmo2630 ribosomal protein L23 4.72965279 14.10566 11.49229 1.07E-13 2.08E-11 lmo2620 ribosomal protein L5 5.01578121 13.94729 11.48325 1.10E-13 2.08E-11 lmo1787 50S ribosomal protein L19 4.54739239 12.92894 11.11421 2.79E-13 3.61E-11 lmo2627 50S ribosomal protein L22 5.60634026 13.76021 10.72661 7.59E-13 8.64E-11 lmo2613 ribosomal protein L15 5.58662399 13.92813 10.67242 8.75E-13 9.58E-11 lmo1657 elongation factor Ts 4.85964155 13.41709 10.58677 1.09E-12 1.15E-10 lmo2608 30S ribosomal protein S13 3.83804212 13.90771 10.36922 1.94E-12 1.91E-10 lmo2656 30S ribosomal protein S12 3.7265996 14.20154 10.30494 2.31E-12 2.19E-10 lmo1335 50S ribosomal protein L33 3.53529543 13.04148 10.21998 2.89E-12 2.66E-10 lmo2616 ribosomal protein L18 3.65839763 14.26311 10.0277 4.85E-12 3.63E-10 lmo1469 30S ribosomal protein S21 6.55693876 12.1647 9.805609 8.86E-12 6.15E-10 lmo2609 ribosomal protein L36 4.76974229 13.55478 9.463682 2.27E-11 1.44E-09 lmo1596 30S ribosomal protein S4 3.86446602 13.11587 9.25741 4.03E-11 2.39E-09 lmo0044 ribosomal protein S6 3.39769783 14.05138 9.239406 4.24E-11 2.41E-09 lmo0894 serine-protein kinase RsbW 2.73051629 13.34428 9.230157 4.35E-11 2.43E-09 lmo0250 ribosomal protein L10 3.18405855 13.36326 9.120526 5.92E-11 3.18E-09 lmo1542 ribosomal protein L21 3.22479071 14.29601 8.896245 1.12E-10 5.58E-09 lmo1785 translation initiation factor IF-3 3.08093871 14.1687 8.598131 2.62E-10 1.15E-08 lmo2191 transcriptional regulator Spx 3.04829858 12.86468 8.596573 2.63E-10 1.15E-08 lmo1449 endonuclease IV 2.9794867 12.5954 8.526833 3.22E-10 1.39E-08 lmo1755 glutamyl-tRNA(Gln) amidotransferase (subunit A) 2.71528386 13.35887 8.36681 5.12E-10 2.08E-08 lmo2622 50S ribosomal protein L14 3.27601744 14.48904 8.248094 7.24E-10 2.78E-08 lmo0249 50S ribosomal protein L1 2.94895931 13.36238 8.185197 8.70E-10 3.26E-08 lmo2606 DNA-directed RNA polymerase alpha subunit 3.62227051 13.94823 8.137973 1.00E-09 3.65E-08 lmo1784 50S ribosomal protein L35 3.05768553 13.60756 8.077376 1.19E-09 4.25E-08 lmo2619 30S ribosomal protein S14 4.06291014 14.22648 8.050684 1.29E-09 4.49E-08 lmo2623 30S ribosomal protein S17 4.73646106 13.98533 8.01609 1.43E-09 4.91E-08 lmo1540 50S ribosomal protein L27 3.75400144 12.99735 7.889256 2.08E-09 6.81E-08 lmo2631 50S ribosomal protein L4 3.22181549 14.44716 7.850666 2.33E-09 7.55E-08 lmo1330 ribosomal protein S15 2.46914306 12.5935 7.826941 2.50E-09 7.92E-08 lmo1267 trigger factor 2.99409552 13.65044 7.707507 3.57E-09 1.05E-07 lmo2621 50S ribosomal protein L24 4.14787685 14.15564 7.629114 4.52E-09 1.31E-07 lmo0893 anti-anti-sigma factor (antagonist of RsbW) 2.49129228 13.03153 7.604179 4.87E-09 1.38E-07 lmo1816 50S ribosomal protein L28 3.74871043 13.33485 7.491976 6.81E-09 1.86E-07 lmo2654 elongation factor EF-2 2.74393712 14.62862 7.431369 8.17E-09 2.19E-07 lmo2618 ribosomal protein S8 3.13435265 14.52766 7.377825 9.60E-09 2.53E-07 lmo2614 ribosomal protein L30 2.6313435 14.63129 7.271905 1.32E-08 3.36E-07 lmo1552 valyl-tRNA synthetase 2.33509486 13.08088 7.135094 2.00E-08 4.79E-07 lmo1938 similar to similar to ribosomal protein S1 like protein 2.61322702 13.27686 7.078981 2.37E-08 5.58E-07 lmo2626 30S ribosomal protein S3 2.68289799 14.68689 7.05731 2.54E-08 5.91E-07 lmo2605 ribosomal protein L17 2.48660042 13.24309 6.980728 3.20E-08 7.23E-07 lmo2625 50S ribosomal protein L16 2.51996924 14.88951 6.947551 3.54E-08 7.88E-07 lmo2632 ribosomal protein L3 2.79327155 14.57274 6.715251 7.21E-08 1.46E-06 lmo1355 elongation factor P 2.46074806 12.68244 6.648919 8.84E-08 1.72E-06 lmo1756 glutamyl-tRNA(Gln) amidotransferase (subunit C) 2.40189773 13.23109 6.448589 1.64E-07 2.97E-06 lmo1325 translation initiation factor IF-2 2.41096173 13.72923 6.407313 1.86E-07 3.35E-06 lmo1327 ribosome-binding factor A 2.19288128 12.43242 6.299269 2.60E-07 4.32E-06 lmo0866 similar to ATP-dependent RNA helicase 2.59892461 13.6344 6.274863 2.80E-07 4.63E-06 lmo2548 ribosomal protein L31 2.36762544 13.40509 6.222752 3.29E-07 5.26E-06 lmo1819 ribosome-associated GTPase 2.11823854 13.93262 6.158857 4.01E-07 6.17E-06 lmo1607 similar phenylalanyl-tRNA synthetase (beta subunit) 2.81665524 11.75607 6.138033 4.28E-07 6.47E-06 lmo1658 30S ribosomal protein S2 2.74668104 14.15607 6.102944 4.77E-07 6.99E-06 lmo2617 50S ribosomal protein L6 2.61675863 14.80359 6.092354 4.93E-07 7.15E-06 lmo1480 ribosomal protein S20 2.05736493 12.86734 6.083225 5.07E-07 7.32E-06 lmo2856 50S ribosomal protein L34 2.34059415 12.50181 6.066999 5.33E-07 7.58E-06 lmo1359 transcription antitermination protein NusB 2.89231599 12.4733 6.011128 6.34E-07 8.80E-06 lmo1455 DNA primase 2.04113551 13.93587 5.826938 1.12E-06 1.38E-05 lmo2653 elongation factor Tu 2.45533105 14.74827 5.753739 1.41E-06 1.65E-05 lmo0251 50S ribosomal protein L7/L12 2.14909597 13.42336 5.747861 1.43E-06 1.67E-05 lmo1759 ATP-dependent DNA helicase 2.16296454 12.93468 5.712694 1.60E-06 1.84E-05 lmo0248 ribosomal protein L11 2.05840907 13.78507 5.697755 1.67E-06 1.92E-05 lmo2219 similar to post-translocation molecular chaperone 2.165472 13.62953 5.688406 1.72E-06 1.96E-05 lmo1454 RNA polymerase sigma factor 2.4351063 13.55303 5.685502 1.74E-06 1.97E-05 lmo2154 ribonucleotide-diphosphate reductase beta subunit 2.39307461 13.6755 5.637595 2.02E-06 2.22E-05 lmo2597 50S ribosomal protein L13 2.06431422 14.50879 5.625084 2.10E-06 2.29E-05 lmo2146 similar to transcription regulator LysR family -2.1353544 13.68233 -5.66365 1.86E-06 2.09E-05 lmo0776 similar to transcription regulator (repressor) -2.0414708 13.3716 -5.5462 2.68E-06 2.82E-05 lmo2334 similar to transcriptional regulator -2.4112734 13.67457 -5.47403 3.35E-06 3.37E-05 lmo1362 similar to exodeoxyribonuclease small subunit 1.89202703 13.26803 5.457228 3.53E-06 3.50E-05 lmo0895 sigma factor B 2.07227582 13.86854 5.394276 4.29E-06 4.11E-05 lmo0002 DNA polymerase III subunit beta 1.96127237 13.67492 5.371625 4.60E-06 4.32E-05 lmo1797 ribosomal protein S16 2.06645208 13.11832 5.357985 4.80E-06 4.49E-05 lmo0046 ribosomal protein S18 1.78277806 10.98297 5.219649 7.36E-06 6.35E-05 lmo2655 30S ribosomal protein S7 2.61035759 14.7487 5.183836 8.22E-06 6.82E-05 lmo1783 50S ribosomal protein L20 1.85255147 13.48036 5.150606 9.11E-06 7.49E-05 lmo2607 30S ribosomal protein S11 2.11039792 14.82524 5.134163 9.59E-06 7.82E-05 lmo1793 similar to putative 16S rRNA processing protein RimM 2.07641743 13.36532 5.087014 1.11E-05 8.81E-05 lmo2164 similar to transcriptional regulator (AraC/XylS family) -1.7833656 12.82725 -5.03236 1.31E-05 0.000101 lmo1287 DNA topoisomerase IV subunit A 1.91992475 13.96126 4.997046 1.46E-05 0.000108 lmo0969 similar to ribosomal large subunit pseudouridine synthetase 2.04330679 13.57049 4.939369 1.75E-05 0.000125 lmo1531 similar to S-adenosylmethionine:tRNA ribosyltransferase-isomerase2.06220183 13.42295 4.968191 1.60E-05 0.000117 lmo1754 aspartyl/glutamyl-tRNA amidotransferase subunit B 2.67748896 12.52853 4.959778 1.64E-05 0.00012 lmo1504 alanyl-tRNA synthetase 2.25343208 13.70091 4.822029 2.50E-05 0.000169 lmo1519 aspartyl-tRNA synthetase 1.78310757 13.25975 4.741648 3.20E-05 0.000207 lmo1522 D-tyrosyl-tRNA deacylase 1.72166172 13.66318 4.439941 7.99E-05 0.000424 lmo0228 lysyl-tRNA synthetase 1.99589895 13.68995 4.379041 9.59E-05 0.00049 lmo1458 similar to glycyl-tRNA synthetase beta chain 2.35386405 13.70612 4.367183 9.94E-05 0.000502 lmo0237 highly similar to glutamyl-tRNA synthetase 1.82007867 13.32816 4.303191 0.00012 0.000579 lmo0896 Indirect negative regulation of sigma B dependant gene expression1.73656152 (serine phosphatase)13.53279 4.271063 0.000133 0.000625 lmo1559 threonyl-tRNA synthetase 1.79118658 13.10461 4.268732 0.000134 0.000628 lmo0007 DNA gyrase subunit A 1.60720944 13.62531 4.209362 0.000159 0.00072 lmo2633 30S ribosomal protein S10 1.97088641 14.79722 4.182698 0.000172 0.000771 lmo1459 glycyl-tRNA synthetase alpha subunit 1.81446886 13.16502 4.124505 0.000205 0.000889 lmo1278 ATP-dependent protease peptidase subunit 1.80683312 14.18201 4.10608 0.000216 0.000933

Motility lmo0690 flagellin protein 3.53960918 14.08425 9.91285 6.62E-12 4.83E-10 lmo0708 similar to hypothetical flagellar protein 2.82315844 12.49065 6.863715 4.58E-08 9.87E-07 lmo0700 similar to flagellar motor switch protein fliY 2.24286378 13.47036 5.42338 3.92E-06 3.81E-05

Signal lmo1745 similar to two-component response regulator 2.47407761 13.09549 6.300479 2.59E-07 4.32E-06 lmo0691 Chemotaxis response regulator CheY 2.00387314 12.84763 5.807423 1.19E-06 1.45E-05 lmo2011 similar to two-component sensor histidine kinase -1.8554971 12.94144 -5.05715 1.22E-05 9.48E-05 lmo1270 similar to signal peptidase I 1.75533081 13.29254 4.584372 5.16E-05 0.000296 lmo0692 two-component sensor histidine kinase CheA 1.873015 14.29962 4.288317 0.000126 0.0006 lmo1699 some similarities to methyl-accepting chemotaxis proteins 1.82031066 14.12234 4.147519 0.000191 0.000842

Other lmo2611 highly similar to adenylate kinases 4.1941302 13.9242 12.62311 6.79E-15 5.06E-12 lmo2115 similar to ABC transporter (permease) 3.45600207 13.79106 11.2784 1.84E-13 3.07E-11 lmo1217 similar to endo-1,4-beta-glucanase and to aminopeptidase 3.30627138 13.42299 10.86138 5.35E-13 6.34E-11 lmo1529 similar to unknown proteins 4.17646846 12.12285 11.12257 2.73E-13 3.61E-11 lmo1541 similar to unknown protein 3.01615926 14.43455 10.43539 1.63E-12 1.66E-10 lmo1468 similar to unknown proteins 3.4590532 13.7058 10.12575 3.73E-12 3.14E-10 lmo1848 similar metal cations ABC transporter (permease protein) 3.79587466 14.51819 10.12269 3.76E-12 3.14E-10 lmo1586 inorganic polyphosphate/ATP-NAD kinase 3.10422853 12.79748 9.593347 1.59E-11 1.07E-09 lmo1649 lmo1649 3.66593633 13.60221 9.571967 1.68E-11 1.11E-09 lmo1439 superoxide dismutase 3.30810378 13.57789 9.383369 2.84E-11 1.75E-09 lmo2196 similar to pheromone ABC transporter (binding protein) 3.63389196 13.74767 8.739165 1.75E-10 8.16E-09 lmo2612 preprotein translocase SecY 3.40765839 14.51763 8.513546 3.35E-10 1.42E-08 lmo1358 similar to B. subtilis YqhY protein 3.16421267 13.39588 8.312747 6.00E-10 2.37E-08 lmo1323 similar to B. subtilis YlxR protein 3.00042368 13.13988 8.278104 6.63E-10 2.59E-08 lmo2031 similar to unknown proteins 3.32429892 13.67641 7.966773 1.66E-09 5.61E-08 lmo1326 conserved hypothetical protein similar to B. subtilis YlxP protein2.5718709 13.05556 7.946099 1.76E-09 5.89E-08 lmo2257 hypothetical CDS 10.0321246 11.75587 7.83628 2.44E-09 7.79E-08 lmo2638 similar to NADH dehydrogenase 2.77150201 14.48069 7.765443 3.01E-09 9.20E-08 lmo1610 hypothetical gene 2.77404681 13.47432 7.709121 3.56E-09 1.05E-07 lmo1456 similar to unknown proteins 2.53227465 13.17564 7.618365 4.66E-09 1.34E-07 lmo0943 non-heme iron-binding ferritin 3.98649737 12.76006 7.526754 6.14E-09 1.71E-07 lmo0930 similar to B. subtilis YhfI protein 2.96063289 12.62266 7.315089 1.16E-08 3.02E-07 lmo2413 similar to aminotransferase 2.76041928 14.26544 7.304082 1.20E-08 3.08E-07 lmo1465 similar to unknown proteins 2.35981849 13.3467 7.22296 1.53E-08 3.83E-07 lmo1457 similar to unknown protein 2.70460376 13.31764 7.200425 1.64E-08 4.03E-07 lmo1487 similar to unknown proteins 2.30947702 13.15263 7.181533 1.74E-08 4.23E-07 lmo1306 highly similar to B. subtilis YneF protein 3.08690188 11.76475 7.054994 2.55E-08 5.91E-07 lmo1674 similar to prolyl aminopetidases 2.55888111 14.10663 7.006645 2.96E-08 6.74E-07 lmo0558 conserved hypothetical protein 2.8133861 13.72291 6.953787 3.48E-08 7.79E-07 lmo1601 similar to general stress protein 2.78654801 14.4036 6.898977 4.11E-08 8.97E-07 lmo0724 similar to B. subtilis YvpB protein 2.18641459 13.90342 6.897275 4.13E-08 8.97E-07 lmo0415 similar to endo-1,4-beta-xylanase 2.00683745 13.68423 6.765377 6.18E-08 1.28E-06 lmo2177 similar to unknown protein 2.57716992 12.92272 6.718931 7.13E-08 1.45E-06 lmo1013 similar to conserved hypothetical proteins like to B. subtilis YkuT2.39549619 protein 13.24955 6.697714 7.61E-08 1.53E-06 lmo1357 acetyl-CoA carboxylase 2.46848225 13.6391 6.69031 7.79E-08 1.55E-06 lmo1700 lmo1700 2.4082781 12.38044 6.671372 8.25E-08 1.63E-06 lmo1528 similar to unknown proteins 2.62534409 13.08831 6.663912 8.44E-08 1.66E-06 lmo1315 similar to undecaprenyl diphosphate synthase 2.30374883 12.78561 6.643764 8.98E-08 1.74E-06 lmo0923 similar to ABC transporter, ATP-binding protein (N-terminal part)3.04228055 11.77897 6.637963 9.14E-08 1.76E-06 lmo1463 similar to cytidine deaminase 2.09097379 13.62221 6.576551 1.10E-07 2.10E-06 lmo1268 ATP-dependent protease ATP-binding subunit 2.54304371 13.34806 6.529824 1.28E-07 2.40E-06 lmo1434 similar to unknown proteins 2.79329745 13.39612 6.486887 1.46E-07 2.69E-06 lmo1087 similar to glucitol dehydrogenase 2.60445383 13.77898 6.376314 2.05E-07 3.57E-06 lmo1462 similar to GTP binding proteins 2.35434615 12.94051 6.249963 3.02E-07 4.92E-06 lmo1388 CD4 T cell-stimulating antigen, lipoprotein 2.67776666 14.0924 6.23844 3.13E-07 5.04E-06 lmo0675 lmo0675 2.31028269 12.2893 6.215474 3.37E-07 5.31E-06 lmo1375 similar to aminotripeptidase 2.02880442 12.90285 6.214271 3.38E-07 5.31E-06 lmo0963 heat shock protein HtpX 2.28499764 13.38407 6.207889 3.44E-07 5.39E-06 lmo2634 similar to B. subtilis YbaF protein 2.30887442 12.25299 6.173025 3.84E-07 5.97E-06 lmo1489 similar to unknown proteins 2.42373833 13.09809 6.110689 4.65E-07 6.86E-06 lmo2194 similar to oligopeptide ABC transporter (permease) 2.39283736 13.94453 6.057224 5.49E-07 7.78E-06 lmo1626 lmo1626 2.29838972 12.2177 6.03016 5.97E-07 8.42E-06 lmo1372 similar to branched-chain alpha-keto acid dehydrogenase E1 subunit2.56427628 (2-oxoisovalerate14.01467 dehydrogenase6.013404 6.29E-07 alpha subunit)8.78E-06 lmo2156 lmo2156 2.35977593 12.35291 5.950523 7.65E-07 1.03E-05 lmo1356 similar to acetyl-CoA carboxylase subunit (biotin carboxyl carrier2.3267001 subunit) 13.27491 5.922766 8.33E-07 1.10E-05 lmo1757 similar to unknown protein 1.94211185 13.67895 5.921361 8.37E-07 1.10E-05 lmo1028 similar to B. subtilis YkzG protein 2.60661844 12.25091 5.916132 8.51E-07 1.11E-05 lmo0196 similar to B. subtilis SpoVG protein 2.3630881 14.47871 5.889258 9.25E-07 1.18E-05 lmo2506 highly similar to cell-division protein FtsX 2.46245959 13.83965 5.868467 9.86E-07 1.25E-05 lmo1324 similar to B. subtilis YlxQ protein 2.20943021 13.84107 5.856094 1.02E-06 1.28E-05 lmo1340 similar to B. subtilis YqgU protein 2.43696699 11.84906 5.853526 1.03E-06 1.29E-05 lmo2193 similar to oligopeptide ABC transporter (ATP-binding protein) 2.36864816 13.36371 5.83361 1.10E-06 1.36E-05 lmo1380 lmo1380 1.94162554 13.14123 5.81998 1.15E-06 1.40E-05 lmo0596 similar to unknown proteins 2.26158954 13.59635 5.779185 1.30E-06 1.57E-05 lmo1582 weakly similar to site specific DNA-methyltransferase 2.65360531 13.77253 5.769463 1.34E-06 1.60E-05 lmo2030 similar to unknown proteins 2.29094631 14.25271 5.762023 1.37E-06 1.62E-05 lmo1460 DNA repair protein RecO 1.93073907 13.0673 5.76032 1.38E-06 1.62E-05 lmo2152 similar to thioredoxin 2.44010524 12.70218 5.69725 1.68E-06 1.92E-05 lmo1580 similar to unknown protein 2.40588021 13.80465 5.653002 1.92E-06 2.15E-05 lmo1218 similar to rRNA methylase 2.17606666 14.26466 5.640294 2.00E-06 2.22E-05 lmo0241 similar to conserved hypothetical proteins like to B. subtilis YacO3.22366306 protein 11.83727 5.608212 2.21E-06 2.40E-05 lmo2527 similar to B. subtilis YwzB protein 2.36894557 11.70796 5.57201 2.47E-06 2.64E-05 lmo0990 conserved hypothetical protein -2.6779865 12.94313 -5.72617 1.53E-06 1.77E-05 lmo2394 hypothetical CDS -5.1704282 6.49507 -5.67551 1.79E-06 2.03E-05 lmo0363 similar to Salmonella typhimurium peptidase E -2.0775569 13.56932 -5.56446 2.53E-06 2.69E-05 lmo0937 lmo0937 3.2523537 11.57213 5.543497 2.70E-06 2.83E-05 lmo1424 putative manganese transport protein MntH 2.43244044 14.42484 5.52564 2.86E-06 2.93E-05 lmo1055 dihydrolipoamide dehydrogenase 2.06110457 14.07186 5.50201 3.07E-06 3.13E-05 lmo1606 similar to DNA translocase 2.1969806 13.65003 5.491875 3.17E-06 3.21E-05 lmo2195 similar to oligopeptide ABC transporter (permease) 2.75791799 13.29342 5.468977 3.40E-06 3.40E-05 lmo2412 similar to conserved hypothetical proteins 2.12577985 14.67351 5.466029 3.44E-06 3.42E-05 lmo2357 similar to unknown protein 2.21635856 12.20906 5.454172 3.56E-06 3.52E-05 lmo1849 similar to metal cations ABC transporter, ATP-binding proteins3.06967647 14.51812 5.443877 3.68E-06 3.62E-05 lmo1549 similar to DNA repair protein RadC -2.0470677 12.27889 -5.54649 2.68E-06 2.82E-05 lmo0767 similar to ABC transporter, permease protein -2.8990035 11.82654 -5.53571 2.77E-06 2.88E-05 lmo0832 similar to transposase -8.5822357 9.835966 -5.52786 2.84E-06 2.92E-05 lmo2012 similar to unknown proteins -2.2057033 12.7463 -5.51473 2.95E-06 3.02E-05 lmo2013 similar to unknown proteins -2.2698083 13.57167 -5.43186 3.82E-06 3.72E-05 lmo0660 similar to transposases -1.9180394 12.20573 -5.42025 3.96E-06 3.83E-05 lmo0636 similar to unknown proteins -2.1235915 13.51617 -5.40712 4.12E-06 3.98E-05 lmo1450 similar to ATP-dependent RNA helicase, DEAD-box family (deaD)1.96516657 13.25202 5.40034 4.21E-06 4.05E-05 lmo1503 lmo1503 2.10105427 14.06501 5.383192 4.44E-06 4.22E-05 lmo0582 P60 extracellular protein, invasion associated protein Iap 2.19861718 12.99104 5.354855 4.85E-06 4.51E-05 lmo1091 similar to glysosyltransferases 1.82942245 12.68633 5.339287 5.09E-06 4.67E-05 lmo1257 lmo1257 2.01988125 13.37186 5.336161 5.14E-06 4.70E-05 lmo1399 similar to unknown protein 2.1260927 14.17427 5.258901 6.52E-06 5.76E-05 lmo1532 highly similar to Holliday junction DNA helicase RuvB 1.87443295 13.66789 5.231552 7.10E-06 6.20E-05 lmo1495 similar to unknown proteins 2.01148947 13.15955 5.218647 7.39E-06 6.35E-05 lmo2114 similar to ABC transporter (ATP-binding protein) 1.97224195 13.38977 5.216886 7.43E-06 6.37E-05 lmo1494 similar to 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase1.91996885 13.61291 5.207661 7.64E-06 6.47E-05 lmo1702 similar to glutathione transferase - fosfomycin resistance protein2.07032001 13.04444 5.197989 7.87E-06 6.61E-05 lmo2032 cell division protein FtsZ 2.21582346 13.98738 5.149857 9.13E-06 7.49E-05 lmo1946 similar to similar to acyl-CoA hydrolase 1.99329822 12.62509 5.126023 9.83E-06 7.97E-05 lmo2748 similar to B. subtilis stress protein YdaG 2.69364414 11.79685 5.117323 1.01E-05 8.16E-05 lmo1711 highly similar to aminopeptidases 1.92392896 12.91374 5.098012 1.07E-05 8.62E-05 lmo1493 similar to oligopeptidase 1.89764965 13.77714 5.087501 1.11E-05 8.81E-05 lmo0635 lmo0635 -2.0847952 12.69201 -5.13287 9.63E-06 7.83E-05 lmo0643 similar to putative transaldolase -1.848536 13.36753 -5.08812 1.10E-05 8.81E-05 lmo1191 cobyrinic acid a,c-diamide synthase -1.9445313 13.02549 -5.08129 1.13E-05 8.95E-05 lmo1248 weakly similar to 8-oxo-dGTPase (mutT) -2.2148461 12.80865 -5.07643 1.15E-05 9.03E-05 lmo0780 lmo0780 -2.1995048 12.16081 -5.07627 1.15E-05 9.03E-05 lmo0174 similar to transposase -2.239112 11.16708 -5.0684 1.17E-05 9.23E-05 lmo0003 conserved hypothetical protein -2.13547 13.50771 -5.05126 1.24E-05 9.62E-05 lmo1342 similar to B. subtilis comG operon protein 6 -2.2071211 11.31111 -5.04499 1.26E-05 9.79E-05 lmo1511 similar to unknown proteins 1.77804645 13.34616 5.034887 1.30E-05 0.0001 lmo1354 similar to aminopeptidase P 2.14433704 13.34287 5.027092 1.33E-05 0.000102 lmo1124 lmo1124 2.37747903 12.28682 5.019346 1.37E-05 0.000103 lmo0991 conserved hypothetical protein -2.1072041 13.28327 -5.0306 1.32E-05 0.000101 lmo1249 lmo1249 -1.8545258 11.38045 -5.02903 1.33E-05 0.000101 lmo1423 lmo1423 2.22510607 13.6043 4.985993 1.51E-05 0.000112 lmo1510 similar to unknown proteins 2.0435494 13.43913 4.956795 1.66E-05 0.000121 lmo1074 highly similar to teichoic acid translocation permease protein TagG2.30403251 12.5517 4.956318 1.66E-05 0.000121 lmo2204 similar to unknown protein 2.1271236 12.83411 4.946093 1.71E-05 0.000123 lmo1891 similar to DNA repair and homologous recombination protein2.02875926 12.24913 4.938455 1.75E-05 0.000125 lmo1794 similar to unknown proteins 1.95588206 13.04795 4.936675 1.76E-05 0.000126 lmo1393 similar to putative protease 2.32490224 13.21734 4.932271 1.78E-05 0.000126 lmo1314 highly similar to ribosome recycling factors 2.37749795 13.21039 4.913599 1.89E-05 0.000133 lmo2411 similar to conserved hypothetical proteins 2.28943364 13.81563 4.895782 2.00E-05 0.00014 lmo2192 similar to oligopeptide ABC transporter (ATP-binding protein) 2.03125896 12.6472 4.891354 2.02E-05 0.000141 lmo1079 similar to B. subtilis YfhO protein 2.05064568 12.32411 4.85491 2.26E-05 0.000156 lmo2639 lmo2639 1.72117357 13.60543 4.854334 2.27E-05 0.000156 lmo2248 similar to unknown proteins 1.91958078 12.70626 4.839684 2.37E-05 0.000161 lmo1453 conserved hypothetical protein 2.08385758 12.61122 4.790544 2.75E-05 0.000183 lmo1452 conserved hypothetical protein 1.86599991 13.49156 4.787173 2.78E-05 0.000184 lmo0641 similar to heavy metal-transporting ATPase 1.99449956 14.09719 4.759256 3.03E-05 0.000198 lmo1428 similar to glycine betaine/carnitine/choline ABC transporter (ATP-binding1.9815125 protein)13.54726 4.722388 3.39E-05 0.000216 lmo1966 similar to unknown proteins 3.01991942 10.84514 4.700313 3.63E-05 0.000228 lmo1389 similar to sugar ABC transporter, ATP-binding protein 1.82436131 13.438 4.680836 3.85E-05 0.000236 lmo0279 anaerobic ribonucleoside triphosphate reductase 1.83443939 13.3943 4.677454 3.89E-05 0.000237 lmo1861 similar to hypothetical proteins 2.29454818 12.31456 4.650171 4.23E-05 0.000253 lmo1752 lmo1752 1.94633508 12.11236 4.629848 4.50E-05 0.000267 lmo1392 similar to putative proteases 2.03482995 13.25486 4.627035 4.53E-05 0.000268 lmo1448 putative manganese-dependent inorganic pyrophosphatase 1.69226334 13.71564 4.619528 4.64E-05 0.000273 lmo1625 similar to putative transporters 2.15181091 12.92756 4.615605 4.69E-05 0.000275 lmo1338 similar to B. subtilis yqgQ 2.57048763 11.29485 4.604198 4.86E-05 0.000283 lmo1955 similar to integrase/recombinase 1.79038948 13.19286 4.593385 5.02E-05 0.000289 lmo1281 similar to B. subtilis YneP protein 2.21091878 12.0628 4.561466 5.53E-05 0.000313 lmo0701 lmo0701 1.90692516 13.73313 4.54443 5.83E-05 0.000326 lmo1499 similar to unknown proteins 1.8419012 12.61496 4.51154 6.44E-05 0.000354 lmo2718 highly similar to cytochrome D ubiquinol oxidase subunit I 2.23236088 14.48397 4.480234 7.07E-05 0.000381 lmo2854 highly similar to B. subtilis SpoIIIJ protein 1.7715196 13.06446 4.464564 7.42E-05 0.000397 lmo1466 similar to unknown proteins 1.95717232 13.56627 4.439776 7.99E-05 0.000424 lmo1282 similar to B. subtilis YneQ protein 1.89395793 12.83309 4.402355 8.95E-05 0.000467 lmo1425 similar to betaine/carnitine/choline ABC transporter (membrane2.12272728 p) 13.55336 4.391194 9.25E-05 0.000477 lmo1054 dihydrolipoamide acetyltransferase 1.98417305 14.88374 4.368959 9.89E-05 0.0005 lmo1863 similar to hypothetical proteins 1.87690352 12.56527 4.347889 0.000105 0.000525 lmo2507 highly similar to the cell-division ATP-binding protein FtsE 2.20895864 13.93955 4.331773 0.000111 0.000544 lmo0962 Listeria epitope LemA 2.04136266 13.61733 4.327899 0.000112 0.000549 lmo0133 similar to E. coli YjdI protein 1.89667827 12.95892 4.320216 0.000114 0.000554 lmo0968 inorganic polyphosphate/ATP-NAD kinase 1.78380008 13.29296 4.279824 0.000129 0.000613 lmo1620 similar to Xaa-His dipeptidase 1.7262101 14.54407 4.265422 0.000135 0.000633 lmo0687 lmo0687 1.78862905 12.8906 4.264564 0.000135 0.000634 lmo1949 similar to unknown proteins 1.67665596 13.0173 4.252674 0.00014 0.000652 lmo1877 similar to formyl-tetrahydrofolate synthetase N-terminal part 2.32073357 12.5156 4.249467 0.000141 0.000656 lmo1602 similar to unknown proteins 2.02619421 14.96637 4.211433 0.000158 0.000717 lmo0169 similar to a glucose uptake protein 1.8844126 13.60242 4.202033 0.000163 0.000733 lmo1644 similar to SNF2-type helicase 1.79005941 13.15719 4.201661 0.000163 0.000733 lmo2414 similar to aminotransferase 2.59151177 14.21959 4.201647 0.000163 0.000733 lmo1479 GTP-binding protein LepA 1.88845196 12.75061 4.1877 0.00017 0.00076 lmo0703 lmo0703 1.70871497 13.55103 4.173745 0.000177 0.000788 lmo0260 similar to unknown proteins 1.81028253 11.46022 4.173628 0.000177 0.000788 lmo1093 NAD(H) synthetase 1.84156595 13.68398 4.165463 0.000182 0.000806 lmo2517 lmo2517 1.73173747 12.4986 4.159886 0.000185 0.000817 lmo1402 similar to B. subtilis YmcA protein 1.87482572 11.41199 4.142566 0.000194 0.000852 lmo1525 similar to single-stranded-DNA-specific exonuclease (RecJ) 1.73898086 13.32102 4.120594 0.000207 0.000898 lmo1862 similar to hypothetical proteins 1.9116129 12.57363 4.087608 0.000229 0.000978