An Updated Review of the Pythons Including Resolution of Issues of Taxonomy and Nomenclature
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Level 1 Fauna Survey of the Gruyere Gold Project Borefields (Harewood 2016)
GOLD ROAD RESOURCES LIMITED GRUYERE PROJECT EPA REFERRAL SUPPORTING DOCUMENT APPENDIX 5: LEVEL 1 FAUNA SURVEY OF THE GRUYERE GOLD PROJECT BOREFIELDS (HAREWOOD 2016) Gruyere EPA Ref Support Doc Final Rev 1.docx Fauna Assessment (Level 1) Gruyere Borefield Project Gold Road Resources Limited January 2016 Version 3 On behalf of: Gold Road Resources Limited C/- Botanica Consulting PO Box 2027 BOULDER WA 6432 T: 08 9093 0024 F: 08 9093 1381 Prepared by: Greg Harewood Zoologist PO Box 755 BUNBURY WA 6231 M: 0402 141 197 T/F: (08) 9725 0982 E: [email protected] GRUYERE BOREFIELD PROJECT –– GOLD ROAD RESOURCES LTD – FAUNA ASSESSMENT (L1) – JAN 2016 – V3 TABLE OF CONTENTS SUMMARY 1. INTRODUCTION .....................................................................................................1 2. SCOPE OF WORKS ...............................................................................................1 3. RELEVANT LEGISTALATION ................................................................................2 4. METHODS...............................................................................................................3 4.1 POTENTIAL VETEBRATE FAUNA INVENTORY - DESKTOP SURVEY ............. 3 4.1.1 Database Searches.......................................................................................3 4.1.2 Previous Fauna Surveys in the Area ............................................................3 4.1.3 Existing Publications .....................................................................................5 4.1.4 Fauna -
Real-Time DNA Barcoding in a Remote Rainforest Using Nanopore Sequencing
bioRxiv preprint doi: https://doi.org/10.1101/189159; this version posted September 15, 2017. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 1 Real-time DNA barcoding in a remote rainforest using nanopore sequencing 2 3 Aaron Pomerantz1,*, Nicolás Peñafiel2, Alejandro Arteaga3, Lucas Bustamante3, Frank Pichardo3, 4 Luis A. Coloma4, César L. Barrio-Amorós5, David Salazar-Valenzuela2, Stefan Prost 1,6,* 5 6 1 Department of Integrative Biology, University of California, Berkeley, CA, USA 7 2 Centro de Investigación de la Biodiversidad y Cambio Climático (BioCamb) e Ingeniería en 8 Biodiversidad y Recursos Genéticos, Facultad de Ciencias de Medio Ambiente, Universidad 9 Tecnológica Indoamérica, Machala y Sabanilla, Quito, Ecuador 10 3 Tropical Herping, Quito, Ecuador 11 4 Centro Jambatu de Investigación y Conservación de Anfibios, Fundación Otonga, Quito, 12 Ecuador 13 5 Doc Frog Expeditions, Uvita, Costa Rica 14 6 Program for Conservation Genomics, Department of Biology, Stanford University, Stanford, CA, 15 USA 16 17 * Corresponding authors: [email protected] (A. Pomerantz) and 18 [email protected] (S. Prost) 19 20 Abstract 21 Advancements in portable scientific instruments provide promising avenues to expedite 22 field work in order to understand the diverse array of organisms that inhabit our planet. 23 Here we tested the feasibility for in situ molecular analyses of endemic fauna using a 24 portable laboratory fitting within a single backpack, in one of the world’s most imperiled 25 biodiversity hotspots: the Ecuadorian Chocó rainforest. -
Venom Characterization of the Three Species of Ophryacus and Proteomic Profiling of O. Sphenophrys Unveils Sphenotoxin, a Novel
Journal of Proteomics xxx (xxxx) xxx–xxx Contents lists available at ScienceDirect Journal of Proteomics journal homepage: www.elsevier.com/locate/jprot Venom characterization of the three species of Ophryacus and proteomic profiling of O. sphenophrys unveils Sphenotoxin, a novel Crotoxin-like heterodimeric β-neurotoxin Edgar Neri-Castroa,b, Bruno Lomontec, Mariel Valdésa,d, Roberto Ponce-Lópeza, Melisa Bénard-Vallea, Miguel Borjae, Jason L. Stricklandf, Jason M. Jonesg, Christoph Grünwaldg, ⁎ Fernando Zamudioa, Alejandro Alagóna, a Instituto de Biotecnología, Universidad Nacional Autónoma de México, Av. Universidad 2001, Colonia Chamilpa, Cuernavaca, Morelos 62210, México b Programa de Doctorado en Ciencias Biomédicas UNAM, México. c Instituto Clodomiro Picado, Facultad de Microbiología, Universidad de Costa Rica, San José 11501, Costa Rica d Laboratorio de Genética, Escuela Nacional de Ciencias Biológicas, Instituto Politécnico Nacional, 07738, México e Facultad de Ciencias Biológicas, Universidad Juárez del Estado de Durango, Av. Universidad s/n. Fracc. Filadelfia, Gómez Palacio C.P. 35010, México. f Department of Biology, University of Central Florida, 4000 Central Florida Blvd, Orlando, FL 32816, USA. g Herp.mx A.C., Villa del Álvarez, Colima, México ABSTRACT Venoms of the three species of Ophryacus (O. sphenophrys, O. smaragdinus, and O. undulatus), a viperid genus endemic to Mexico, were analyzed for the first time in the present work. The three venoms lacked procoagulant activity on human plasma, but induced hemorrhage and were highly lethal to mice. These venoms also displayed proteolytic and phospholipase A2 activities in vitro. The venom of O. sphenophrys was the most lethal and caused hind-limb paralysis in mice. Proteomic profiling of O. -
Crocodylus Moreletii
ANFIBIOS Y REPTILES: DIVERSIDAD E HISTORIA NATURAL VOLUMEN 03 NÚMERO 02 NOVIEMBRE 2020 ISSN: 2594-2158 Es un publicación de la CONSEJO DIRECTIVO 2019-2021 COMITÉ EDITORIAL Presidente Editor-en-Jefe Dr. Hibraim Adán Pérez Mendoza Dra. Leticia M. Ochoa Ochoa Universidad Nacional Autónoma de México Senior Editors Vicepresidente Dr. Marcio Martins (Artigos em português) Dr. Óscar A. Flores Villela Dr. Sean M. Rovito (English papers) Universidad Nacional Autónoma de México Editores asociados Secretario Dr. Uri Omar García Vázquez Dra. Ana Bertha Gatica Colima Dr. Armando H. Escobedo-Galván Universidad Autónoma de Ciudad Juárez Dr. Oscar A. Flores Villela Dra. Irene Goyenechea Mayer Goyenechea Tesorero Dr. Rafael Lara Rezéndiz Dra. Anny Peralta García Dr. Norberto Martínez Méndez Conservación de Fauna del Noroeste Dra. Nancy R. Mejía Domínguez Dr. Jorge E. Morales Mavil Vocal Norte Dr. Hibraim A. Pérez Mendoza Dr. Juan Miguel Borja Jiménez Dr. Jacobo Reyes Velasco Universidad Juárez del Estado de Durango Dr. César A. Ríos Muñoz Dr. Marco A. Suárez Atilano Vocal Centro Dra. Ireri Suazo Ortuño M. en C. Ricardo Figueroa Huitrón Dr. Julián Velasco Vinasco Universidad Nacional Autónoma de México M. en C. Marco Antonio López Luna Dr. Adrián García Rodríguez Vocal Sur M. en C. Marco Antonio López Luna Universidad Juárez Autónoma de Tabasco English style corrector PhD candidate Brett Butler Diseño editorial Lic. Andrea Vargas Fernández M. en A. Rafael de Villa Magallón http://herpetologia.fciencias.unam.mx/index.php/revista NOTAS CIENTÍFICAS SKIN TEXTURE CHANGE IN DIASPORUS HYLAEFORMIS (ANURA: ELEUTHERODACTYLIDAE) ..................... 95 CONTENIDO Juan G. Abarca-Alvarado NOTES OF DIET IN HIGHLAND SNAKES RHADINAEA EDITORIAL CALLIGASTER AND RHADINELLA GODMANI (SQUAMATA:DIPSADIDAE) FROM COSTA RICA ..... -
An Investigation of the Evolution of Australian Elapid Snake Venoms
toxins Article Rapid Radiations and the Race to Redundancy: An Investigation of the Evolution of Australian Elapid Snake Venoms Timothy N. W. Jackson 1, Ivan Koludarov 1, Syed A. Ali 1,2, James Dobson 1, Christina N. Zdenek 1, Daniel Dashevsky 1, Bianca op den Brouw 1, Paul P. Masci 3, Amanda Nouwens 4, Peter Josh 4, Jonathan Goldenberg 1, Vittoria Cipriani 1, Chris Hay 1, Iwan Hendrikx 1, Nathan Dunstan 5, Luke Allen 5 and Bryan G. Fry 1,* 1 Venom Evolution Lab, School of Biological Sciences, University of Queensland, St Lucia, QLD 4072, Australia; [email protected] (T.N.W.J.); [email protected] (I.K.); [email protected] (S.A.A.); [email protected] (J.D.); [email protected] (C.N.Z.); [email protected] (D.D.); [email protected] (B.o.d.B.); [email protected] (J.G.); [email protected] (V.C.); [email protected] (C.H.); [email protected] (I.H.) 2 HEJ Research Institute of Chemistry, International Centre for Chemical and Biological Sciences (ICCBS), University of Karachi, Karachi 75270, Pakistan 3 Princess Alexandra Hospital, Translational Research Institute, University of Queensland, St Lucia, QLD 4072, Australia; [email protected] 4 School of Chemistry and Molecular Biosciences, University of Queensland, St Lucia, QLD 4072, Australia; [email protected] (A.N.); [email protected] (P.J.) 5 Venom Supplies, Tanunda, South Australia 5352, Australia; [email protected] (N.D.); [email protected] (L.A.) * Correspondence: [email protected]; Tel.: +61-4-0019-3182 Academic Editor: Nicholas R. -
Atropoides Picadoi Agkistrodon Bilineatus
37 Beauty of the Beast SNAKES OF COSTA RICA AA DEADLYDEADLY CHARMCHARM Large and small, colorful or drab, harmless or dangerously venomous - meet some of the most fascinating ophidians of Mesoamerica 38 Spilotes pullatus Powerful, muscular, agile and fast-moving, this diurnal and highly variable species can attain a length of 2.6 meter / 8.5 feet. Relatively common in dry lowland riverine forest from Mexico to Argentina, it makes for an impressive encounter in the field, offering a most effective defensive display which includes mouth gaping, loud hissing and extreme inflating of the throat. 39 TEXTS BY POMPILIO CAMPOS BONILLA & ANDREA FERRARI PHOTOS BY ANDREA & ANTONELLA FERRARI and POMPILIO CAMPOS CHINCHILLA osta Rica is a Central American in major international treaties and Ctropical country which thanks to its conventions for the conservation of prevailing environmental conditions nature. A member of CITES, it follow can boast a rich diversity of snakes, strict rules regulating the international with a total of 11 families, 64 genera trade in endangered species - therefore and 139 ophidian species of aquatic, snakes enjoy benefits conferred by terrestrial and arboreal habits, law, ensuring their survival. However, distributed in almost all its territory, because of the myths and popular from sea level to an elevation of about beliefs about snakes, many species of 3000 meters. Only 22 of these possess great ecological importance are still a venom capable of causing harm to victims of human ignorance and are human health - these belong to the regularly killed, mainly in agricultural family Viperidae (pit vipers with heat- areas where workers are afraid of sensitive loreal pits, with haemotoxic being bitten. -
Australian Society of Herpetologists
1 THE AUSTRALIAN SOCIETY OF HERPETOLOGISTS INCORPORATED NEWSLETTER 48 Published 29 October 2014 2 Letter from the editor This letter finds itself far removed from last year’s ASH conference, held in Point Wolstoncroft, New South Wales. Run by Frank Lemckert and Michael Mahony and their team of froglab strong, the conference featured some new additions including the hospitality suite (as inspired by the Turtle Survival Alliance conference in Tuscon, Arizona though sadly lacking of the naked basketball), egg and goon race and bouncing castle (Simon’s was a deprived childhood), as well as the more traditional elements of ASH such as the cricket match and Glenn Shea’s trivia quiz. May I just add that Glenn Shea wowed everyone with his delightful skin tight, anatomically correct, and multi-coloured, leggings! To the joy of everybody in the world, the conference was opened by our very own Hal Cogger (I love you Hal). Plenary speeches were given by Dale Roberts, Lin Schwarzkopf and Gordon Grigg and concurrent sessions were run about all that is cutting edge in science and herpetology. Of note, award winning speeches were given by Kate Hodges (Ph.D) and Grant Webster (Honours) and the poster prize was awarded to Claire Treilibs. Thank you to everyone who contributed towards an update and Jacquie Herbert for all the fantastic photos. By now I trust you are all preparing for the fast approaching ASH 2014, the 50 year reunion and set to have many treats in store. I am sad to not be able to join you all in celebrating what is sure to be, an informative and fun spectacle. -
Inventario De Flora Y Fauna En El CBIMA (12.6
ii CRÉDITOS Comité Directivo José Vicente Troya Rodríguez Representante Residente del PNUD en Costa Rica Kryssia Brade Representante Residente Adjunta del PNUD en Costa Rica Coordinado por Miriam Miranda Quirós Coordinadora del proyecto Paisajes Productivos-PNUD Consultores que trabajaron en la realización del estudio José Esteban Jiménez, estudio de plantas vasculares Federico Oviedo Brenes, estudio de plantas vasculares Fabián Araya Yannarella, estudio de hongos Víctor J. Acosta-Chaves, estudios de aves, de anfibios y de reptiles Susana Gutiérrez Acuña, estudio de mamíferos Revisado por el comité editorial PNUD Rafaella Sánchez Ingrid Hernández Jose Daniel Estrada Diseño y diagramación Marvin Rojas San José, Costa Rica, 2019 iii RESUMEN EJECUTIVO El conocimiento sobre la diversidad 84 especies esperadas, 21 especies de biológica que habita los ecosistemas anfibios y 84 especies de reptiles. naturales, tanto boscosos como no boscosos, así como en áreas rurales y La diversidad acá presentada, con urbanas, es la línea base fundamental excepción de los hongos, es entre 100 y para establecer un manejo y una gestión 250% mayor respecto al estudio similar adecuadas sobre la protección, efectuado en el 2001 (FUNDENA 2001). conservación y uso sostenible de los La cantidad de especies sensibles es recursos naturales. En el Corredor baja para cada grupo de organismos Biológico Interurbano Maria Aguilar se respecto al total. El CBIMA posee una encontró un total de 765 especies de gran cantidad de especies de plantas plantas vasculares, (74.9% son nativas nativas con alto potencial para restaurar de Costa Rica y crecen naturalmente en espacios físicos degradados y para el CBIMA, un 3.5% son nativas de Costa utilizar como ornamentales. -
Squamata: Viperidae: Bothriechis) from the Costa Rican Highlands, with Notes on the Variation Within B
Zootaxa 4138 (2): 271–290 ISSN 1175-5326 (print edition) http://www.mapress.com/j/zt/ Article ZOOTAXA Copyright © 2016 Magnolia Press ISSN 1175-5334 (online edition) http://doi.org/10.11646/zootaxa.4138.2.3 http://zoobank.org/urn:lsid:zoobank.org:pub:4F1E4A87-5370-420C-9C16-2BC373645110 A cryptic palm-pitviper species (Squamata: Viperidae: Bothriechis) from the Costa Rican highlands, with notes on the variation within B. nigroviridis TIFFANY M. DOAN1, ANDREW J. MASON1, TODD A. CASTOE2, MAHMOOD SASA3 & CHRISTOPHER L. PARKINSON1,4 1Department of Biology, University of Central Florida, 4000 Central Florida Blvd, Orlando, FL 32816, USA. E-mail: [email protected], [email protected], [email protected] 2Department of Biology, 501 S. Nedderman Drive, University of Texas at Arlington, Arlington, TX 76019, USA. E-mail: [email protected] 3Instituto Clodomiro Picado, Facultad de Microbiología, Universidad de Costa Rica, and Palo Verde Biological Station, Organization for Tropical Studies, San José, Costa Rica. E-mail: [email protected] 4Corresponding author Abstract Middle America is one of the most biodiverse regions in the world, harboring an exceptional number of rare and endemic species. This is especially true of Middle American cloud forests, where montane specialists occupy restricted, high-ele- vation ranges making them attractive candidates for investigating historical biogeography and speciation. One such high- land-restricted species, the black speckled palm-pitviper (Bothriechis nigroviridis), occupies the Central, Tilarán, and Talamanca Cordilleras in Costa Rica and Panama. In this study, we investigate the genetic and morphological variation among populations of B. nigroviridis by inferring a multilocus phylogeny (21 individuals) and analyzing meristic scale characters with a principal component analysis (64 individuals). -
AC27 Inf. 17 (Rev.1) (English Only / Únicamente En Inglés / Seulement En Anglais)
AC27 Inf. 17 (Rev.1) (English only / únicamente en inglés / seulement en anglais) CONVENTION ON INTERNATIONAL TRADE IN ENDANGERED SPECIES OF WILD FAUNA AND FLORA ____________ Twenty-seventh meeting of the Animals Committee Veracruz (Mexico), 28 April – 3 May 2014 INSPECTION MANUAL FOR USE IN COMMERCIAL REPTILE BREEDING FACILITIES IN SOUTHEAST ASIA 1. The attached information document has been submitted by the Secretariat and has been prepared by TRAFFIC* in relation to agenda item 9. * The geographical designations employed in this document do not imply the expression of any opinion whatsoever on the part of the CITES Secretariat or the United Nations Environment Programme concerning the legal status of any country, territory, or area, or concerning the delimitation of its frontiers or boundaries. The responsibility for the contents of the document rests exclusively with its author. AC27 Doc. 17 (Rev.1) – p. 1 Inspection Manual for use in Commercial Reptile Breeding Facilities in Southeast Asia EU- CITES Capacity - building project N o . S - 408 2013 CITES Secretariat About the EU-CITES Capacity-building project The project Strengthening CITES implementation capacity of developing countries to ensure sustainable wildlife management and non-detrimental trade was approved for funding by the European Union in 2009. A major challenge for many countries is the difficulty in meeting the requirements for trade in CITES-listed species, ranging from legal sourcing and sustainability requirements, to the effective control of legal trade and deterrence of illegal trade. Mechanisms exist in CITES and in both exporting and importing countries that promote and facilitate compliance – although Parties are often hampered by a lack of capacity or a lack of current biological or trade information with respect to certain species. -
A Phylogeny and Revised Classification of Squamata, Including 4161 Species of Lizards and Snakes
BMC Evolutionary Biology This Provisional PDF corresponds to the article as it appeared upon acceptance. Fully formatted PDF and full text (HTML) versions will be made available soon. A phylogeny and revised classification of Squamata, including 4161 species of lizards and snakes BMC Evolutionary Biology 2013, 13:93 doi:10.1186/1471-2148-13-93 Robert Alexander Pyron ([email protected]) Frank T Burbrink ([email protected]) John J Wiens ([email protected]) ISSN 1471-2148 Article type Research article Submission date 30 January 2013 Acceptance date 19 March 2013 Publication date 29 April 2013 Article URL http://www.biomedcentral.com/1471-2148/13/93 Like all articles in BMC journals, this peer-reviewed article can be downloaded, printed and distributed freely for any purposes (see copyright notice below). Articles in BMC journals are listed in PubMed and archived at PubMed Central. For information about publishing your research in BMC journals or any BioMed Central journal, go to http://www.biomedcentral.com/info/authors/ © 2013 Pyron et al. This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. A phylogeny and revised classification of Squamata, including 4161 species of lizards and snakes Robert Alexander Pyron 1* * Corresponding author Email: [email protected] Frank T Burbrink 2,3 Email: [email protected] John J Wiens 4 Email: [email protected] 1 Department of Biological Sciences, The George Washington University, 2023 G St. -
Tan Choo Hock Thesis Submitted in Fulfi
TOXINOLOGICAL CHARACTERIZATIONS OF THE VENOM OF HUMP-NOSED PIT VIPER (HYPNALE HYPNALE) TAN CHOO HOCK THESIS SUBMITTED IN FULFILMENT OF THE REQUIREMENTS FOR THE DEGREE OF DOCTOR OF PHILOSOPHY FACULTY OF MEDICINE UNIVERSITY OF MALAYA KUALA LUMPUR 2013 Abstract Hump-nosed pit viper (Hypnale hypnale) is a medically important snake in Sri Lanka and Western Ghats of India. Envenomation by this snake still lacks effective antivenom clinically. The species is also often misidentified, resulting in inappropriate treatment. The median lethal dose (LD50) of H. hypnale venom varies from 0.9 µg/g intravenously to 13.7 µg/g intramuscularly in mice. The venom shows procoagulant, hemorrhagic, necrotic, and various enzymatic activities including those of proteases, phospholipases A2 and L-amino acid oxidases which have been partially purified. The monovalent Malayan pit viper antivenom and Hemato polyvalent antivenom (HPA) from Thailand effectively cross-neutralized the venom’s lethality in vitro (median effective dose, ED50 = 0.89 and 1.52 mg venom/mL antivenom, respectively) and in vivo in mice, besides the procoagulant, hemorrhagic and necrotic effects. HPA also prevented acute kidney injury in mice following experimental envenomation. Therefore, HPA may be beneficial in the treatment of H. hypnale envenomation. H. hypnale-specific antiserum and IgG, produced from immunization in rabbits, effectively neutralized the venom’s lethality and various toxicities, indicating the feasibility to produce an effective specific antivenom with a common immunization regime. On indirect ELISA, the IgG cross-reacted extensively with Asiatic crotalid venoms, particularly that of Calloselasma rhodostoma (73.6%), suggesting that the two phylogenically related snakes share similar venoms antigenic properties.