BIOL 2015 – Evolution and Diversity Lab 8: Lophotrochozoa – Part I: Platyhelminthes, Rotifera, Bryozoa, and Brachiopoda
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Comparative Neuroanatomy of Mollusks and Nemerteans in the Context of Deep Metazoan Phylogeny
Comparative Neuroanatomy of Mollusks and Nemerteans in the Context of Deep Metazoan Phylogeny Von der Fakultät für Mathematik, Informatik und Naturwissenschaften der RWTH Aachen University zur Erlangung des akademischen Grades einer Doktorin der Naturwissenschaften genehmigte Dissertation vorgelegt von Diplom-Biologin Simone Faller aus Frankfurt am Main Berichter: Privatdozent Dr. Rudolf Loesel Universitätsprofessor Dr. Peter Bräunig Tag der mündlichen Prüfung: 09. März 2012 Diese Dissertation ist auf den Internetseiten der Hochschulbibliothek online verfügbar. Contents 1 General Introduction 1 Deep Metazoan Phylogeny 1 Neurophylogeny 2 Mollusca 5 Nemertea 6 Aim of the thesis 7 2 Neuroanatomy of Minor Mollusca 9 Introduction 9 Material and Methods 10 Results 12 Caudofoveata 12 Scutopus ventrolineatus 12 Falcidens crossotus 16 Solenogastres 16 Dorymenia sarsii 16 Polyplacophora 20 Lepidochitona cinerea 20 Acanthochitona crinita 20 Scaphopoda 22 Antalis entalis 22 Entalina quinquangularis 24 Discussion 25 Structure of the brain and nerve cords 25 Caudofoveata 25 Solenogastres 26 Polyplacophora 27 Scaphopoda 27 i CONTENTS Evolutionary considerations 28 Relationship among non-conchiferan molluscan taxa 28 Position of the Scaphopoda within Conchifera 29 Position of Mollusca within Protostomia 30 3 Neuroanatomy of Nemertea 33 Introduction 33 Material and Methods 34 Results 35 Brain 35 Cerebral organ 38 Nerve cords and peripheral nervous system 38 Discussion 38 Peripheral nervous system 40 Central nervous system 40 In search for the urbilaterian brain 42 4 General Discussion 45 Evolution of higher brain centers 46 Neuroanatomical glossary and data matrix – Essential steps toward a cladistic analysis of neuroanatomical data 49 5 Summary 53 6 Zusammenfassung 57 7 References 61 Danksagung 75 Lebenslauf 79 ii iii 1 General Introduction Deep Metazoan Phylogeny The concept of phylogeny follows directly from the theory of evolution as published by Charles Darwin in The origin of species (1859). -
Defining Phyla: Evolutionary Pathways to Metazoan Body Plans
EVOLUTION & DEVELOPMENT 3:6, 432-442 (2001) Defining phyla: evolutionary pathways to metazoan body plans Allen G. Collins^ and James W. Valentine* Museum of Paleontology and Department of Integrative Biology, University of California, Berkeley, CA 94720, USA 'Author for correspondence (email: [email protected]) 'Present address: Section of Ecology, Befiavior, and Evolution, Division of Biology, University of California, San Diego, La Jolla, CA 92093-0116, USA SUMMARY Phyla are defined by two sets of criteria, one pothesis of Nielsen; the clonal hypothesis of Dewel; the set- morphological and the other historical. Molecular evidence aside cell hypothesis of Davidson et al.; and a benthic hy- permits the grouping of animals into clades and suggests that pothesis suggested by the fossil record. It is concluded that a some groups widely recognized as phyla are paraphyletic, benthic radiation of animals could have supplied the ances- while some may be polyphyletic; the phyletic status of crown tral lineages of all but a few phyla, is consistent with molecu- phyla is tabulated. Four recent evolutionary scenarios for the lar evidence, accords well with fossil evidence, and accounts origins of metazoan phyla and of supraphyletic clades are as- for some of the difficulties in phylogenetic analyses of phyla sessed in the light of a molecular phylogeny: the trochaea hy- based on morphological criteria. INTRODUCTION Molecules have provided an important operational ad- vance to addressing questions about the origins of animal Concepts of animal phyla have changed importantly from phyla. Molecular developmental and comparative genomic their origins in the six Linnaean classis and four Cuvieran evidence offer insights into the genetic bases of body plan embranchements. -
"Phoronida". In: Encyclopedia of Life Science
Phoronida Introductory article Christian C Emig, Centre d’Oce´anologie de Marseille CNRS, Marseille, France Article Contents . Basic Design The Phoronida, divided into two genera and 10 species, is a small marine group, which . Diversity and Lifestyles belongs to the phylum Lophophorata. Fossil History and Phylogeny Basic Design complexity of the lophophore from an oval to a helicoidal, The Phoronida is an exclusively marine group with a sessile through a horseshoe and spiral shape. This is related to an vermiform body enclosed in a tube (Figure 1) The body is increase in the number of tentacles, which is proportional composed of three distinct parts (prosome, mesosome and to the general body size. metasome), each containing its own coelomic cavity. The The metasome (or trunk) is slender and cylindrical, with prosome forms the epistome, a fold overhanging the mouth a bulb-like posterior end (or ampulla) that anchors the dorsally. The mesosome bears the lophophore, with the body in the rear end of the tube. It is separated from the rest mouth lying between its two rows of tentacles. The of the body by the diaphragm, a thick transverse septum lophophore is a terminal, bilaterally symmetrical, tentacle located behind the lophophore. crown, each tentacle having complex arrays of cilia for The digestive tract is U-shaped, bringing the anus close filter-feeding. Lophophore shape is a fairly constant to the mouth. The descending branch is divided into a short feature within each species, and there is an increasing oesophagus, followed by a long prestomach, then a stomach surrounded by a blood plexus. -
S I Section 4
3/31/2011 Copyright © The McGraw-Hill Companies, Inc. Permission required for reproduction or display. Porifera Ecdysozoa Deuterostomia Lophotrochozoa Cnidaria and Ctenophora Cnidaria and Protostomia SSiection 4 Radiata Bilateria Professor Donald McFarlane Parazoa Eumetazoa Lecture 13 Invertebrates: Parazoa, Radiata, and Lophotrochozoa Ancestral colonial choanoflagellate 2 Traditional classification based on Parazoa – Phylum Porifera body plans Copyright © The McGraw-Hill Companies, Inc. Permission required for reproduction or display. Parazoa 4 main morphological and developmental Sponges features used Loosely organized and lack Porifera Ecdysozoa Cnidaria and Ctenophora tissues euterostomia photrochozoa D 1. o Presence or absence of different tissue L Multicellular with several types of types Protostomia cells 2. Type of body symmetry Radiata Bilateria 8,000 species, mostly marine Parazoa Eumetazoa 3. Presence or absence of a true body No apparent symmetry cavity Ancestral colonial Adults sessile, larvae free- choanoflagellate 4. Patterns of embryonic development swimming 3 4 1 3/31/2011 Water drawn through pores (ostia) into spongocoel Flows out through osculum Reproduce Choanocytes line spongocoel Sexually Most hermapppgggphrodites producing eggs and sperm Trap and eat small particles and plankton Gametes are derived from amoebocytes or Mesohyl between choanocytes and choanocytes epithelial cells Asexually Amoebocytes absorb food from choanocytes, Small fragment or bud may detach and form a new digest it, and carry -
Decoding the Fossil Record of Early Lophophorates
Digital Comprehensive Summaries of Uppsala Dissertations from the Faculty of Science and Technology 1284 Decoding the fossil record of early lophophorates Systematics and phylogeny of problematic Cambrian Lophotrochozoa AODHÁN D. BUTLER ACTA UNIVERSITATIS UPSALIENSIS ISSN 1651-6214 ISBN 978-91-554-9327-1 UPPSALA urn:nbn:se:uu:diva-261907 2015 Dissertation presented at Uppsala University to be publicly examined in Hambergsalen, Geocentrum, Villavägen 16, Uppsala, Friday, 23 October 2015 at 13:15 for the degree of Doctor of Philosophy. The examination will be conducted in English. Faculty examiner: Professor Maggie Cusack (School of Geographical and Earth Sciences, University of Glasgow). Abstract Butler, A. D. 2015. Decoding the fossil record of early lophophorates. Systematics and phylogeny of problematic Cambrian Lophotrochozoa. (De tidigaste fossila lofoforaterna. Problematiska kambriska lofotrochozoers systematik och fylogeni). Digital Comprehensive Summaries of Uppsala Dissertations from the Faculty of Science and Technology 1284. 65 pp. Uppsala: Acta Universitatis Upsaliensis. ISBN 978-91-554-9327-1. The evolutionary origins of animal phyla are intimately linked with the Cambrian explosion, a period of radical ecological and evolutionary innovation that begins approximately 540 Mya and continues for some 20 million years, during which most major animal groups appear. Lophotrochozoa, a major group of protostome animals that includes molluscs, annelids and brachiopods, represent a significant component of the oldest known fossil records of biomineralised animals, as disclosed by the enigmatic ‘small shelly fossil’ faunas of the early Cambrian. Determining the affinities of these scleritome taxa is highly informative for examining Cambrian evolutionary patterns, since many are supposed stem- group Lophotrochozoa. The main focus of this thesis pertained to the stem-group of the Brachiopoda, a highly diverse and important clade of suspension feeding animals in the Palaeozoic era, which are still extant but with only with a fraction of past diversity. -
Animal Phylogeny and the Ancestry of Bilaterians: Inferences from Morphology and 18S Rdna Gene Sequences
EVOLUTION & DEVELOPMENT 3:3, 170–205 (2001) Animal phylogeny and the ancestry of bilaterians: inferences from morphology and 18S rDNA gene sequences Kevin J. Peterson and Douglas J. Eernisse* Department of Biological Sciences, Dartmouth College, Hanover NH 03755, USA; and *Department of Biological Science, California State University, Fullerton CA 92834-6850, USA *Author for correspondence (email: [email protected]) SUMMARY Insight into the origin and early evolution of the and protostomes, with ctenophores the bilaterian sister- animal phyla requires an understanding of how animal group, whereas 18S rDNA suggests that the root is within the groups are related to one another. Thus, we set out to explore Lophotrochozoa with acoel flatworms and gnathostomulids animal phylogeny by analyzing with maximum parsimony 138 as basal bilaterians, and with cnidarians the bilaterian sister- morphological characters from 40 metazoan groups, and 304 group. We suggest that this basal position of acoels and gna- 18S rDNA sequences, both separately and together. Both thostomulids is artifactal because for 1000 replicate phyloge- types of data agree that arthropods are not closely related to netic analyses with one random sequence as outgroup, the annelids: the former group with nematodes and other molting majority root with an acoel flatworm or gnathostomulid as the animals (Ecdysozoa), and the latter group with molluscs and basal ingroup lineage. When these problematic taxa are elim- other taxa with spiral cleavage. Furthermore, neither brachi- inated from the matrix, the combined analysis suggests that opods nor chaetognaths group with deuterostomes; brachiopods the root lies between the deuterostomes and protostomes, are allied with the molluscs and annelids (Lophotrochozoa), and Ctenophora is the bilaterian sister-group. -
Schizorhynchia Meixner, 1928 (Platyhelminthes, Rhabdocoela) of the Iberian Peninsula, with a Description of Four New Species from Portugal
European Journal of Taxonomy 595: 1–17 ISSN 2118-9773 https://doi.org/10.5852/ejt.2020.595 www.europeanjournaloftaxonomy.eu 2020 · Gobert S. et al. This work is licensed under a Creative Commons Attribution License (CC BY 4.0). Research article urn:lsid:zoobank.org:pub:F81A7282-A44B-4E70-9A44-FE8F67E5C1EA Schizorhynchia Meixner, 1928 (Platyhelminthes, Rhabdocoela) of the Iberian Peninsula, with a description of four new species from Portugal Stefan GOBERT 1, Marlies MONNENS 2,*, Lise EERDEKENS 3, Ernest SCHOCKAERT 4, Patrick REYGEL 5 & Tom ARTOIS 6 1,2,3,4,5,6 Hasselt University, Centre for Environmental Sciences, Research Group Zoology: Biodiversity and Toxicology, Agoralaan Gebouw D, B-3590 Diepenbeek, Belgium. * Corresponding author: [email protected] 1 Email: [email protected] 3 Email: [email protected] 4 Email: [email protected] 5 Email: [email protected] 6 Email: [email protected] 1 urn:lsid:zoobank.org:author:5A55D3D7-B529-41FA-AA02-EE554F4A8CF9 2 urn:lsid:zoobank.org:author:782F71E0-EF84-48DA-BE72-8E205CB78EAC 3 urn:lsid:zoobank.org:author:11C7606C-7677-4F9B-9295-604DABFC1DCA 4 urn:lsid:zoobank.org:author:73DA9DFC-69DB-4168-88FA-B0ED54C88DDB 5 urn:lsid:zoobank.org:author:481991C8-BA09-457F-81EA-937C7A3DFD91 6 urn:lsid:zoobank.org:author:2EDDE35C-A2F0-4CA2-84AA-2A7893C40AC4 Abstract. During several sampling campaigns in the regions of Galicia and Andalusia in Spain and the Algarve region in Portugal, specimens of twelve species of schizorhynch rhabdocoels were collected. Four of these are new to science: three species of Proschizorhynchus (P. algarvensis sp. nov., P. arnautsae sp. -
Nemertean and Phoronid Genomes Reveal Lophotrochozoan Evolution and the Origin of Bilaterian Heads
Nemertean and phoronid genomes reveal lophotrochozoan evolution and the origin of bilaterian heads Author Yi-Jyun Luo, Miyuki Kanda, Ryo Koyanagi, Kanako Hisata, Tadashi Akiyama, Hirotaka Sakamoto, Tatsuya Sakamoto, Noriyuki Satoh journal or Nature Ecology & Evolution publication title volume 2 page range 141-151 year 2017-12-04 Publisher Springer Nature Macmillan Publishers Limited Rights (C) 2017 Macmillan Publishers Limited, part of Springer Nature. Author's flag publisher URL http://id.nii.ac.jp/1394/00000281/ doi: info:doi/10.1038/s41559-017-0389-y Creative Commons Attribution 4.0 International (http://creativecommons.org/licenses/by/4.0/) ARTICLES https://doi.org/10.1038/s41559-017-0389-y Nemertean and phoronid genomes reveal lophotrochozoan evolution and the origin of bilaterian heads Yi-Jyun Luo 1,4*, Miyuki Kanda2, Ryo Koyanagi2, Kanako Hisata1, Tadashi Akiyama3, Hirotaka Sakamoto3, Tatsuya Sakamoto3 and Noriyuki Satoh 1* Nemerteans (ribbon worms) and phoronids (horseshoe worms) are closely related lophotrochozoans—a group of animals including leeches, snails and other invertebrates. Lophotrochozoans represent a superphylum that is crucial to our understand- ing of bilaterian evolution. However, given the inconsistency of molecular and morphological data for these groups, their ori- gins have been unclear. Here, we present draft genomes of the nemertean Notospermus geniculatus and the phoronid Phoronis australis, together with transcriptomes along the adult bodies. Our genome-based phylogenetic analyses place Nemertea sis- ter to the group containing Phoronida and Brachiopoda. We show that lophotrochozoans share many gene families with deu- terostomes, suggesting that these two groups retain a core bilaterian gene repertoire that ecdysozoans (for example, flies and nematodes) and platyzoans (for example, flatworms and rotifers) do not. -
Atp8 Is in the Ground Pattern of Flatworm Mitochondrial Genomes Bernhard Egger1* , Lutz Bachmann2 and Bastian Fromm3
Egger et al. BMC Genomics (2017) 18:414 DOI 10.1186/s12864-017-3807-2 RESEARCH ARTICLE Open Access Atp8 is in the ground pattern of flatworm mitochondrial genomes Bernhard Egger1* , Lutz Bachmann2 and Bastian Fromm3 Abstract Background: To date, mitochondrial genomes of more than one hundred flatworms (Platyhelminthes) have been sequenced. They show a high degree of similarity and a strong taxonomic bias towards parasitic lineages. The mitochondrial gene atp8 has not been confidently annotated in any flatworm sequenced to date. However, sampling of free-living flatworm lineages is incomplete. We addressed this by sequencing the mitochondrial genomes of the two small-bodied (about 1 mm in length) free-living flatworms Stenostomum sthenum and Macrostomum lignano as the first representatives of the earliest branching flatworm taxa Catenulida and Macrostomorpha respectively. Results: We have used high-throughput DNA and RNA sequence data and PCR to establish the mitochondrial genome sequences and gene orders of S. sthenum and M. lignano. The mitochondrial genome of S. sthenum is 16,944 bp long and includes a 1,884 bp long inverted repeat region containing the complete sequences of nad3, rrnS, and nine tRNA genes. The model flatworm M. lignano has the smallest known mitochondrial genome among free- living flatworms, with a length of 14,193 bp. The mitochondrial genome of M. lignano lacks duplicated genes, however, tandem repeats were detected in a non-coding region. Mitochondrial gene order is poorly conserved in flatworms, only a single pair of adjacent ribosomal or protein-coding genes – nad4l-nad4 – was found in S. sthenum and M. -
Digenea, Haploporoidea): the Case of Atractotrema Sigani, Intestinal Parasite of Siganus Lineatus Abdoulaye J
First spermatological study in the Atractotrematidae (Digenea, Haploporoidea): the case of Atractotrema sigani, intestinal parasite of Siganus lineatus Abdoulaye J. S. Bakhoum, Yann Quilichini, Jean-Lou Justine, Rodney A. Bray, Jordi Miquel, Carlos Feliu, Cheikh T. Bâ, Bernard Marchand To cite this version: Abdoulaye J. S. Bakhoum, Yann Quilichini, Jean-Lou Justine, Rodney A. Bray, Jordi Miquel, et al.. First spermatological study in the Atractotrematidae (Digenea, Haploporoidea): the case of Atractotrema sigani, intestinal parasite of Siganus lineatus. Parasite, EDP Sciences, 2015, 22, pp.26. 10.1051/parasite/2015026. hal-01299921 HAL Id: hal-01299921 https://hal.archives-ouvertes.fr/hal-01299921 Submitted on 11 Apr 2016 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Distributed under a Creative Commons Attribution| 4.0 International License Parasite 2015, 22,26 Ó A.J.S. Bakhoum et al., published by EDP Sciences, 2015 DOI: 10.1051/parasite/2015026 Available online at: www.parasite-journal.org RESEARCH ARTICLE OPEN ACCESS First spermatological study in the Atractotrematidae (Digenea, Haploporoidea): the case of Atractotrema sigani, intestinal parasite of Siganus lineatus Abdoulaye J. S. Bakhoum1,2, Yann Quilichini1,*, Jean-Lou Justine3, Rodney A. -
Recent Progress in Reconstructing Lophotrochozoan (Spiralian) Phylogeny
Organisms Diversity & Evolution (2019) 19:557–566 https://doi.org/10.1007/s13127-019-00412-4 REVIEW Recent progress in reconstructing lophotrochozoan (spiralian) phylogeny Christoph Bleidorn1 Received: 29 March 2019 /Accepted: 11 August 2019 /Published online: 22 August 2019 # Gesellschaft für Biologische Systematik 2019 Abstract Lophotrochozoa (also called Spiralia), the sister taxon of Ecdysozoa, includes animal taxa with disparate body plans such as the segmented annelids, the shell bearing molluscs and brachiopods, the colonial bryozoans, the endoparasitic acanthocephalans and the acoelomate platyhelminths. Phylogenetic relationships within Lophotrochozoa have been notoriously difficult to resolve leading to the point that they are often represented as polytomy. Recent studies focussing on phylogenomics, Hox genes and fossils provided new insights into the evolutionary history of this difficult group. New evidence supporting the inclusion of chaetognaths within gnathiferans, the phylogenetic position of Orthonectida and Dicyemida, as well as the general phylogeny of lophotrochozoans is reviewed. Several taxa formerly erected based on morphological synapomorphies (e.g. Lophophorata, Tetraneuralia, Parenchymia) seem (finally) to get additional support from phylogenomic analyses. Keywords Lophotrochozoa . Chaetognatha . Phylogenomics . Rare genomic changes . Annelida Molecular systematics revolutionized and revitalized the Weigertetal.2014;Andradeetal.2015;Laumeretal. field of animal phylogenetics. The landmark publications 2015a;Strucketal.2015;Struck2019), Platyhelminthes of Halanych et al. (1995) and Aguinaldo et al. (1997) (Egger et al. 2015;Laumeretal.2015b)orMollusca shaped our new view of animal phylogeny by establishing (Kocot et al. 2011; Smith et al. 2011). However, the phy- a system where the vast majority of bilaterian diversity is logeny within Lophotrochozoa is still strongly debated. grouped into Deuterostomia, Ecdysozoa and One of the few phylogenetic hypotheses which unambig- Lophotrochozoa (Halanych 2004). -
Platyhelminthes
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