A New Genus of Fossil Frog (Anura) from Lower Cretaceous Deposits in South America
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Genetic Analysis of Signal Peptides in Amphibian Antimicrobial Secretions
Journal of Genetics, Vol. 97, No. 5, December 2018, pp. 1205–1212 © Indian Academy of Sciences https://doi.org/10.1007/s12041-018-1018-5 RESEARCH ARTICLE Genetic analysis of signal peptides in amphibian antimicrobial secretions L. O. PÉREZ1, N. L. CANCELARICH2, S. AGUILAR2,3,N.G.BASSO4 and M. M. MARANI2∗ 1Instituto Patagónico de Ciencias Sociales y Humanas (IPCSH), Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Puerto Madryn, Argentina 2Instituto Patagónico para el Estudio de Ecosistemas Continentales (IPEEC),Puerto Madryn, Argentina 3Facultad de Ciencias Naturales, Sede Puerto Madryn, Universidad Nacional de la Patagonia San Juan Bosco, 3051 Brown Boulevard, Puerto Madryn, Argentina 4Instituto de Diversidad y Evolución Austral (IDEAus), Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), 2915 Brown Boulevard, Puerto Madryn, Argentina *For correspondence. E-mail: [email protected]. Received 22 February 2018; accepted 1 May 2018; published online 7 November 2018 Abstract. Amphibian secretion is an important source of bioactive molecules that naturally protect the skin against noxious microorganisms. Collectively called antimicrobial peptides (AMPs), these molecules have a wide spectrum of action, targeting viruses, bacteria and fungi. Like many membrane and secreted proteins, AMPs have cleavable signal sequences that mediate and translocate the nascent polypeptide chains into the endoplasmic reticulum. Although it is accepted that the signal peptides (SPs) are simple and interchangeable, there is neither sequence nor structure that is conserved among all gene families. They derived from a common ancestor but developed different traits as they adapt to distinct environmental pressures. The aim of this study was to provide an overview of the diversity of SPs of the frog, taking into account reported cDNA sequences and the evolutionary relationship among them. -
Catalogue of the Amphibians of Venezuela: Illustrated and Annotated Species List, Distribution, and Conservation 1,2César L
Mannophryne vulcano, Male carrying tadpoles. El Ávila (Parque Nacional Guairarepano), Distrito Federal. Photo: Jose Vieira. We want to dedicate this work to some outstanding individuals who encouraged us, directly or indirectly, and are no longer with us. They were colleagues and close friends, and their friendship will remain for years to come. César Molina Rodríguez (1960–2015) Erik Arrieta Márquez (1978–2008) Jose Ayarzagüena Sanz (1952–2011) Saúl Gutiérrez Eljuri (1960–2012) Juan Rivero (1923–2014) Luis Scott (1948–2011) Marco Natera Mumaw (1972–2010) Official journal website: Amphibian & Reptile Conservation amphibian-reptile-conservation.org 13(1) [Special Section]: 1–198 (e180). Catalogue of the amphibians of Venezuela: Illustrated and annotated species list, distribution, and conservation 1,2César L. Barrio-Amorós, 3,4Fernando J. M. Rojas-Runjaic, and 5J. Celsa Señaris 1Fundación AndígenA, Apartado Postal 210, Mérida, VENEZUELA 2Current address: Doc Frog Expeditions, Uvita de Osa, COSTA RICA 3Fundación La Salle de Ciencias Naturales, Museo de Historia Natural La Salle, Apartado Postal 1930, Caracas 1010-A, VENEZUELA 4Current address: Pontifícia Universidade Católica do Río Grande do Sul (PUCRS), Laboratório de Sistemática de Vertebrados, Av. Ipiranga 6681, Porto Alegre, RS 90619–900, BRAZIL 5Instituto Venezolano de Investigaciones Científicas, Altos de Pipe, apartado 20632, Caracas 1020, VENEZUELA Abstract.—Presented is an annotated checklist of the amphibians of Venezuela, current as of December 2018. The last comprehensive list (Barrio-Amorós 2009c) included a total of 333 species, while the current catalogue lists 387 species (370 anurans, 10 caecilians, and seven salamanders), including 28 species not yet described or properly identified. Fifty species and four genera are added to the previous list, 25 species are deleted, and 47 experienced nomenclatural changes. -
A New Species of Leptolalax (Anura: Megophryidae) from the Western Langbian Plateau, Southern Vietnam
Zootaxa 3931 (2): 221–252 ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ Article ZOOTAXA Copyright © 2015 Magnolia Press ISSN 1175-5334 (online edition) http://dx.doi.org/10.11646/zootaxa.3931.2.3 http://zoobank.org/urn:lsid:zoobank.org:pub:BC97C37F-FD98-4704-A39A-373C8919C713 A new species of Leptolalax (Anura: Megophryidae) from the western Langbian Plateau, southern Vietnam NIKOLAY A. POYARKOV, JR.1,2,7, JODI J.L. ROWLEY3,4, SVETLANA I. GOGOLEVA2,5, ANNA B. VASSILIEVA1,2, EDUARD A. GALOYAN2,5& NIKOLAI L. ORLOV6 1Department of Vertebrate Zoology, Biological Faculty, Lomonosov Moscow State University, Leninskiye Gory, GSP–1, Moscow 119991, Russia 2Joint Russian-Vietnamese Tropical Research and Technological Center under the A.N. Severtsov Institute of Ecology and Evolution RAS, South Branch, 3, Street 3/2, 10 District, Ho Chi Minh City, Vietnam 3Australian Museum Research Institute, Australian Museum, 6 College St, Sydney, NSW, 2010, Australia 4School of Marine and Tropical Biology, James Cook University, Townsville, QLD, 4811, Australia 5Zoological Museum of the Lomonosov Moscow State University, Bolshaya Nikitskaya st. 6, Moscow 125009, Russia 6Zoological Institute, Russian Academy of Sciences, Universitetskaya nab., 1, St. Petersburg 199034, Russia 7Corresponding author. E-mail: [email protected] Abstract We describe a new species of megophryid frog from Loc Bac forest in the western part of the Langbian Plateau in the southern Annamite Mountains, Vietnam. Leptolalax pyrrhops sp. nov. is distinguished from its congeners -
An Action Plan for Darwin's Frogs Brings Key Stakeholders Together
A flagship for Austral temperate forest conservation: an action plan for Darwin's frogs brings key stakeholders together C LAUDIO A ZAT,ANDRÉS V ALENZUELA-SÁNCHEZ,SOLEDAD D ELGADO A NDREW A. CUNNINGHAM,MARIO A LVARADO-RYBAK,JOHARA B OURKE R AÚL B RIONES,OSVALDO C ABEZA,CAMILA C ASTRO-CARRASCO,ANDRES C HARRIER C LAUDIO C ORREA,MARTHA L. CRUMP,CÉSAR C. CUEVAS,MARIANO DE LA M AZA S ANDRA D ÍAZ-VIDAL,EDGARDO F LORES,GEMMA H ARDING,ESTEBAN O. LAVILLA M ARCO A. MENDEZ,FRANK O BERWEMMER,JUAN C ARLOS O RTIZ,HERNÁN P ASTORE A LEXANDRA P EÑAFIEL-RICAURTE,LEONORA R OJAS-SALINAS J OSÉ M ANUEL S ERRANO,MAXIMILIANO A. SEPÚLVEDA,VERÓNICA T OLEDO C ARMEN Ú BEDA,DAVID E. URIBE-RIVERA,CATALINA V ALDIVIA S ALLY W REN and A RIADNE A NGULO Abstract Darwin’sfrogsRhinoderma darwinii and Rhino- the Austral temperate forests of Chile and Argentina. This derma rufum are the only known species of amphibians recommendation forms part of the vision of the Bination- in which males brood their offspring in their vocal sacs. We al Conservation Strategy for Darwin’sFrogs,whichwas propose these frogs as flagship species for the conservation of launched in . The strategy is a conservation initiative CLAUDIO AZAT* (Corresponding author, orcid.org/0000-0001-9201-7886), EDGARDO FLORES* Fundación Nahuelbuta Natural, Cañete, Chile MARIO ALVARADO-RYBAK*, ALEXANDRA PEÑAFIEL-RICAURTE* and CATALINA VALDIVIA GEMMA HARDING* Durrell Institute of Conservation and Ecology, School of Sustainability Research Centre, Life Sciences Faculty, Universidad Andres Anthropology and Conservation, University of Kent, Canterbury, UK Bello, Republica 440, Santiago, Chile. -
About the Book the Format Acknowledgments
About the Book For more than ten years I have been working on a book on bryophyte ecology and was joined by Heinjo During, who has been very helpful in critiquing multiple versions of the chapters. But as the book progressed, the field of bryophyte ecology progressed faster. No chapter ever seemed to stay finished, hence the decision to publish online. Furthermore, rather than being a textbook, it is evolving into an encyclopedia that would be at least three volumes. Having reached the age when I could retire whenever I wanted to, I no longer needed be so concerned with the publish or perish paradigm. In keeping with the sharing nature of bryologists, and the need to educate the non-bryologists about the nature and role of bryophytes in the ecosystem, it seemed my personal goals could best be accomplished by publishing online. This has several advantages for me. I can choose the format I want, I can include lots of color images, and I can post chapters or parts of chapters as I complete them and update later if I find it important. Throughout the book I have posed questions. I have even attempt to offer hypotheses for many of these. It is my hope that these questions and hypotheses will inspire students of all ages to attempt to answer these. Some are simple and could even be done by elementary school children. Others are suitable for undergraduate projects. And some will take lifelong work or a large team of researchers around the world. Have fun with them! The Format The decision to publish Bryophyte Ecology as an ebook occurred after I had a publisher, and I am sure I have not thought of all the complexities of publishing as I complete things, rather than in the order of the planned organization. -
Anura: Pelobatidae) MCZ by LIBRARY
Scientific Papers Natural History Museum The University of Kansas 18 July 2003 Number 30:1-13 Skeletal Development of Pelobates cultripes and a Comparison of the Osteogenesis of Pelobatid Frogs (Anura: Pelobatidae) MCZ By LIBRARY Z008 Anne M. Magl.a' JUL 2 3 Division of Hcrpetologi/, Natural History Museiiui and Biodiversity Researcli Center, and Department ojEonbgi^gMSpY Evolutionary Biology, The University of Kansas, Laivreuce, Kansas 66045, USA CONTENTS ABSTRACT 1 RESUMEN 2 INTRODUCTION 2 Acknowledgments 2 MATERIALS AND METHODS 2 RESULTS 3 Cranial Development 3 Hyobranchial Development 6 PosTCRANiAL Development 6 DISCUSSION 8 LITERATURE CITED 13 ABSTRACT The larval skeleton and osteogenesis of Pelobates cultripjes is described and compared to that of several pelobatoid and non-pelobatoid taxa. Several features of the larval skeleton are of inter- est, including: absence of a cartilaginous strip between the cornua trabeculae, type of articulation of cornua and suprarostrals, presence of adrostral tissues, and the condition of the otic process. By com- paring sequence of ossification events across taxa, several patterns of skeletal development for Pelobates cultripes emerge, including: conserved timing of prootic ossification, delayed onset of mentomeckelian ossification, and early formation of vomerine teeth. Several other developmental features, including the absence of a palatine (= neopalatine) bone and the formation of the frontoparietal, also are discussed. Key Words: Anura, Pelobatoidea, Pelobatidae, desarollo, osteologia, Pelobates, -
Phylogenetic Analyses Reveal Unexpected Patterns in the Evolution of Reproductive Modes in Frogs
ORIGINAL ARTICLE doi:10.1111/j.1558-5646.2012.01715.x PHYLOGENETIC ANALYSES REVEAL UNEXPECTED PATTERNS IN THE EVOLUTION OF REPRODUCTIVE MODES IN FROGS Ivan Gomez-Mestre,1,2 Robert Alexander Pyron,3 and John J. Wiens4 1Estacion´ Biologica´ de Donana,˜ Consejo Superior de Investigaciones Cientıficas,´ Avda. Americo Vespucio s/n, Sevilla 41092, Spain 2E-mail: [email protected] 3Department of Biological Sciences, The George Washington University, Washington DC 20052 4Department of Ecology and Evolution, Stony Brook University, Stony Brook, New York 11794–5245 Received November 2, 2011 Accepted June 2, 2012 Understanding phenotypic diversity requires not only identification of selective factors that favor origins of derived states, but also factors that favor retention of primitive states. Anurans (frogs and toads) exhibit a remarkable diversity of reproductive modes that is unique among terrestrial vertebrates. Here, we analyze the evolution of these modes, using comparative methods on a phylogeny and matched life-history database of 720 species, including most families and modes. As expected, modes with terrestrial eggs and aquatic larvae often precede direct development (terrestrial egg, no tadpole stage), but surprisingly, direct development evolves directly from aquatic breeding nearly as often. Modes with primitive exotrophic larvae (feeding outside the egg) frequently give rise to direct developers, whereas those with nonfeeding larvae (endotrophic) do not. Similarly, modes with eggs and larvae placed in locations protected from aquatic predators evolve frequently but rarely give rise to direct developers. Thus, frogs frequently bypass many seemingly intermediate stages in the evolution of direct development. We also find significant associations between terrestrial reproduction and reduced clutch size, larger egg size, reduced adult size, parental care, and occurrence in wetter and warmer regions. -
Evaluating Methods for Phylogenomic Analyses, and a New Phylogeny for a Major Frog Clade
Molecular Phylogenetics and Evolution 119 (2018) 128–143 Contents lists available at ScienceDirect Molecular Phylogenetics and Evolution journal homepage: www.elsevier.com/locate/ympev Evaluating methods for phylogenomic analyses, and a new phylogeny for a MARK major frog clade (Hyloidea) based on 2214 loci ⁎ Jeffrey W. Streichera,b, , Elizabeth C. Millera, Pablo C. Guerreroc,d, Claudio Corread, Juan C. Ortizd, Andrew J. Crawforde, Marcio R. Pief, John J. Wiensa a Department of Ecology and Evolutionary Biology, University of Arizona, Tucson, AZ 85721, USA b Department of Life Sciences, The Natural History Museum, London SW7 5BD, UK c Institute of Ecology and Biodiversity, Faculty of Sciences, University of Chile, 780-0024 Santiago, Chile d Facultad de Ciencias Naturales & Oceanográficas, Universidad de Concepción, Concepción, Chile e Department of Biological Sciences, Universidad de los Andes, A.A. 4976 Bogotá, Colombia f Departamento de Zoologia, Universidade Federal do Paraná, Curitiba, Paraná, Brazil ARTICLE INFO ABSTRACT Keywords: Phylogenomic approaches offer a wealth of data, but a bewildering diversity of methodological choices. These Amphibia choices can strongly affect the resulting topologies. Here, we explore two controversial approaches (binning Anura genes into “supergenes” and inclusion of only rapidly evolving sites), using new data from hyloid frogs. Hyloid Biogeography frogs encompass ∼53% of frog species, including true toads (Bufonidae), glassfrogs (Centrolenidae), poison Naive binning frogs (Dendrobatidae), and treefrogs (Hylidae). Many hyloid families are well-established, but relationships Phylogenomics among these families have remained difficult to resolve. We generated a dataset of ultraconserved elements Statistical binning (UCEs) for 50 ingroup species, including 18 of 19 hyloid families and up to 2214 loci spanning > 800,000 aligned base pairs. -
GEOLOGIC TIME SCALE V
GSA GEOLOGIC TIME SCALE v. 4.0 CENOZOIC MESOZOIC PALEOZOIC PRECAMBRIAN MAGNETIC MAGNETIC BDY. AGE POLARITY PICKS AGE POLARITY PICKS AGE PICKS AGE . N PERIOD EPOCH AGE PERIOD EPOCH AGE PERIOD EPOCH AGE EON ERA PERIOD AGES (Ma) (Ma) (Ma) (Ma) (Ma) (Ma) (Ma) HIST HIST. ANOM. (Ma) ANOM. CHRON. CHRO HOLOCENE 1 C1 QUATER- 0.01 30 C30 66.0 541 CALABRIAN NARY PLEISTOCENE* 1.8 31 C31 MAASTRICHTIAN 252 2 C2 GELASIAN 70 CHANGHSINGIAN EDIACARAN 2.6 Lopin- 254 32 C32 72.1 635 2A C2A PIACENZIAN WUCHIAPINGIAN PLIOCENE 3.6 gian 33 260 260 3 ZANCLEAN CAPITANIAN NEOPRO- 5 C3 CAMPANIAN Guada- 265 750 CRYOGENIAN 5.3 80 C33 WORDIAN TEROZOIC 3A MESSINIAN LATE lupian 269 C3A 83.6 ROADIAN 272 850 7.2 SANTONIAN 4 KUNGURIAN C4 86.3 279 TONIAN CONIACIAN 280 4A Cisura- C4A TORTONIAN 90 89.8 1000 1000 PERMIAN ARTINSKIAN 10 5 TURONIAN lian C5 93.9 290 SAKMARIAN STENIAN 11.6 CENOMANIAN 296 SERRAVALLIAN 34 C34 ASSELIAN 299 5A 100 100 300 GZHELIAN 1200 C5A 13.8 LATE 304 KASIMOVIAN 307 1250 MESOPRO- 15 LANGHIAN ECTASIAN 5B C5B ALBIAN MIDDLE MOSCOVIAN 16.0 TEROZOIC 5C C5C 110 VANIAN 315 PENNSYL- 1400 EARLY 5D C5D MIOCENE 113 320 BASHKIRIAN 323 5E C5E NEOGENE BURDIGALIAN SERPUKHOVIAN 1500 CALYMMIAN 6 C6 APTIAN LATE 20 120 331 6A C6A 20.4 EARLY 1600 M0r 126 6B C6B AQUITANIAN M1 340 MIDDLE VISEAN MISSIS- M3 BARREMIAN SIPPIAN STATHERIAN C6C 23.0 6C 130 M5 CRETACEOUS 131 347 1750 HAUTERIVIAN 7 C7 CARBONIFEROUS EARLY TOURNAISIAN 1800 M10 134 25 7A C7A 359 8 C8 CHATTIAN VALANGINIAN M12 360 140 M14 139 FAMENNIAN OROSIRIAN 9 C9 M16 28.1 M18 BERRIASIAN 2000 PROTEROZOIC 10 C10 LATE -
Young Et Al., 2014)
bs_bs_banner Biological Journal of the Linnean Society, 2014, 113, 854–871. With 11 figures Marine tethysuchian crocodyliform from the ?Aptian-Albian (Lower Cretaceous) of the Isle of Wight, UK MARK T. YOUNG1,2*, LORNA STEEL3, DAVIDE FOFFA4, TREVOR PRICE5, DARREN NAISH2 and JONATHAN P. TENNANT6 1Institute of Evolutionary Biology, School of Biological Sciences, University of Edinburgh, The King’s Buildings, Edinburgh EH9 3JW, UK 2School of Ocean and Earth Science, National Oceanography Centre, University of Southampton, Southampton SO14 3ZH, UK 3Department of Earth Sciences, Natural History Museum, London SW7 5BD, UK 4School of Earth Sciences, University of Bristol, Wills Memorial Building, Bristol BS8 1RJ, UK 5Dinosaur Isle Museum, Sandown, Isle of Wight PO36 8QA, UK 6Department of Earth Science and Engineering, Imperial College London, London SW6 2AZ, UK Received 1 February 2014; revised 5 May 2014; accepted for publication 7 July 2014 A marine tethysuchian crocodyliform from the Isle of Wight, most likely from the Upper Greensand Formation (upper Albian, Lower Cretaceous), is described. However, we cannot preclude it being from the Ferruginous Sands Formation (upper Aptian), or more remotely, the Sandrock Formation (upper Aptian-upper Albian). The specimen consists of the anterior region of the right dentary, from the tip of the dentary to the incomplete fourth alveolus. This specimen increases the known geological range of marine tethysuchians back into the late Lower Cretaceous. Although we refer it to Tethysuchia incertae sedis, there are seven anterior dentary characteristics that suggest a possible relationship with the Maastrichtian-Eocene clade Dyrosauridae. We also review ‘middle’ Cretaceous marine tethysuchians, including putative Cenomanian dyrosaurids. -
Report 2015–1087
Chronostratigraphic Cross Section of Cretaceous Formations in Western Montana, Western Wyoming, Eastern Utah, Northeastern Arizona, and Northwestern New Mexico, U.S.A. Pamphlet to accompany Open-File Report 2015–1087 U.S. Department of the Interior U.S. Geological Survey Chronostratigraphic Cross Section of Cretaceous Formations in Western Montana, Western Wyoming, Eastern Utah, Northeastern Arizona, and Northwestern New Mexico, U.S.A. By E.A. Merewether and K.C. McKinney Pamphlet to accompany Open-File Report 2015–1087 U.S. Department of the Interior U.S. Geological Survey U.S. Department of the Interior SALLY JEWELL, Secretary U.S. Geological Survey Suzette M. Kimball, Acting Director U.S. Geological Survey, Reston, Virginia: 2015 For more information on the USGS—the Federal source for science about the Earth, its natural and living resources, natural hazards, and the environment—visit http://www.usgs.gov or call 1–888–ASK–USGS. For an overview of USGS information products, including maps, imagery, and publications, visit http://www.usgs.gov/pubprod/. Any use of trade, firm, or product names is for descriptive purposes only and does not imply endorsement by the U.S. Government. Although this information product, for the most part, is in the public domain, it also may contain copyrighted materials as noted in the text. Permission to reproduce copyrighted items must be secured from the copyright owner. Suggested citation: Merewether, E.A., and McKinney, K.C., 2015, Chronostratigraphic cross section of Cretaceous formations in western Montana, western Wyoming, eastern Utah, northeastern Arizona, and northwestern New Mexico, U.S.A.: U.S. Geological Survey Open-File Report 2015–1087, 10 p. -
Rampant Tooth Loss Across 200 Million Years of Frog Evolution
bioRxiv preprint doi: https://doi.org/10.1101/2021.02.04.429809; this version posted February 6, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY 4.0 International license. 1 Rampant tooth loss across 200 million years of frog evolution 2 3 4 Daniel J. Paluh1,2, Karina Riddell1, Catherine M. Early1,3, Maggie M. Hantak1, Gregory F.M. 5 Jongsma1,2, Rachel M. Keeffe1,2, Fernanda Magalhães Silva1,4, Stuart V. Nielsen1, María Camila 6 Vallejo-Pareja1,2, Edward L. Stanley1, David C. Blackburn1 7 8 1Department of Natural History, Florida Museum of Natural History, University of Florida, 9 Gainesville, Florida USA 32611 10 2Department of Biology, University of Florida, Gainesville, Florida USA 32611 11 3Biology Department, Science Museum of Minnesota, Saint Paul, Minnesota USA 55102 12 4Programa de Pós Graduação em Zoologia, Universidade Federal do Pará/Museu Paraense 13 Emilio Goeldi, Belém, Pará Brazil 14 15 *Corresponding author: Daniel J. Paluh, [email protected], +1 814-602-3764 16 17 Key words: Anura; teeth; edentulism; toothlessness; trait lability; comparative methods 1 bioRxiv preprint doi: https://doi.org/10.1101/2021.02.04.429809; this version posted February 6, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY 4.0 International license.