Genetic Analysis of Signal Peptides in Amphibian Antimicrobial Secretions
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Amphibian Neuropeptides: Isolation, Sequence Determination and Bioactivity
Amphibian Neuropeptides: Isolation, Sequence Determination and Bioactivity A Thesis submitted for the Degree of Doctor of Philosophy in the Department of Chemistry by Vita Marie Maselli B.Sc. (Hons) July 2006 Preface ___________________________________________________________________________________________ Contents Abstract viii Statement of Originality x Acknowledgements xi List of Figures xii List of Tables xv The 20 Common Amino Acids xvi Chapter 1- Amphibians and their Peptides 1 1.1 Amphibian Peptides 1 1.1a Amphibians 1 1.1b The Role of Anuran Peptides 2 1.2 The Pharmacology of Peptides 4 1.2a Neuropeptides 5 1.2b Hormonal Peptides 7 1.2c Antibacterial Peptides 8 1.2d Anticancer Agents 9 1.2e Antifungal Peptides 9 1.2f Antimalarial Peptides 9 1.2g Pheromones 10 1.2h Miscellaneous Peptides 10 1.3 Peptide Biosynthesis 11 1.4 Methodology 12 1.4a Collection of Frog Secretions 12 1.4b Analysis by High Performance Liquid Chromatography 13 1.4c Mass Spectrometry 14 1.4d Q-TOF 2 Hybrid Quadrupole Time of Flight Mass Spectrometer 15 ii Preface ___________________________________________________________________________________________ 1.5 Peptide Sequencing 18 1.5a Positive and Negative Ion Mass Spectrometry 18 1.5b Automated Edman Sequencing 21 1.5c Enzyme Digestion 22 1.5d Determination of the C-terminal End Group 23 1.6 Bioactivity Testing 24 Chapter 2- Studies of Skin Secretions from the Crinia genus 2.1 Introduction 25 2.1a General 25 2.1b Cyclic Peptides 29 2.2 Host-Defence Compounds from Crinia riparia 30 2.2a Results 30 2.2.1a Isolation -
Predation by Introduced Cats Felis Catus on Australian Frogs: Compilation of Species Records and Estimation of Numbers Killed
Predation by introduced cats Felis catus on Australian frogs: compilation of species records and estimation of numbers killed J. C. Z. WoinarskiA,M, S. M. LeggeB,C, L. A. WoolleyA,L, R. PalmerD, C. R. DickmanE, J. AugusteynF, T. S. DohertyG, G. EdwardsH, H. GeyleA, H. McGregorI, J. RileyJ, J. TurpinK and B. P. MurphyA ANESP Threatened Species Recovery Hub, Research Institute for the Environment and Livelihoods, Charles Darwin University, Darwin, NT 0909, Australia. BNESP Threatened Species Recovery Hub, Centre for Biodiversity and Conservation Research, University of Queensland, St Lucia, Qld 4072, Australia. CFenner School of the Environment and Society, Linnaeus Way, The Australian National University, Canberra, ACT 2602, Australia. DWestern Australian Department of Biodiversity, Conservation and Attractions, Bentley, WA 6983, Australia. ENESP Threatened Species Recovery Hub, Desert Ecology Research Group, School of Life and Environmental Sciences, University of Sydney, NSW 2006, Australia. FQueensland Parks and Wildlife Service, Red Hill, Qld 4701, Australia. GCentre for Integrative Ecology, School of Life and Environmental Sciences (Burwood campus), Deakin University, Geelong, Vic. 3216, Australia. HNorthern Territory Department of Land Resource Management, PO Box 1120, Alice Springs, NT 0871, Australia. INESP Threatened Species Recovery Hub, School of Biological Sciences, University of Tasmania, Hobart, Tas. 7001, Australia. JSchool of Biological Sciences, University of Bristol, 24 Tyndall Avenue, Bristol BS8 1TQ, United Kingdom. KDepartment of Terrestrial Zoology, Western Australian Museum, 49 Kew Street, Welshpool, WA 6106, Australia. LPresent address: WWF-Australia, 3 Broome Lotteries House, Cable Beach Road, Broome, WA 6276, Australia. MCorresponding author. Email: [email protected] Table S1. Data sources used in compilation of cat predation on frogs. -
Rampant Tooth Loss Across 200 Million Years of Frog Evolution
bioRxiv preprint doi: https://doi.org/10.1101/2021.02.04.429809; this version posted February 6, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY 4.0 International license. 1 Rampant tooth loss across 200 million years of frog evolution 2 3 4 Daniel J. Paluh1,2, Karina Riddell1, Catherine M. Early1,3, Maggie M. Hantak1, Gregory F.M. 5 Jongsma1,2, Rachel M. Keeffe1,2, Fernanda Magalhães Silva1,4, Stuart V. Nielsen1, María Camila 6 Vallejo-Pareja1,2, Edward L. Stanley1, David C. Blackburn1 7 8 1Department of Natural History, Florida Museum of Natural History, University of Florida, 9 Gainesville, Florida USA 32611 10 2Department of Biology, University of Florida, Gainesville, Florida USA 32611 11 3Biology Department, Science Museum of Minnesota, Saint Paul, Minnesota USA 55102 12 4Programa de Pós Graduação em Zoologia, Universidade Federal do Pará/Museu Paraense 13 Emilio Goeldi, Belém, Pará Brazil 14 15 *Corresponding author: Daniel J. Paluh, [email protected], +1 814-602-3764 16 17 Key words: Anura; teeth; edentulism; toothlessness; trait lability; comparative methods 1 bioRxiv preprint doi: https://doi.org/10.1101/2021.02.04.429809; this version posted February 6, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY 4.0 International license. -
ARAZPA YOTF Infopack.Pdf
ARAZPA 2008 Year of the Frog Campaign Information pack ARAZPA 2008 Year of the Frog Campaign Printing: The ARAZPA 2008 Year of the Frog Campaign pack was generously supported by Madman Printing Phone: +61 3 9244 0100 Email: [email protected] Front cover design: Patrick Crawley, www.creepycrawleycartoons.com Mobile: 0401 316 827 Email: [email protected] Front cover photo: Pseudophryne pengilleyi, Northern Corroboree Frog. Photo courtesy of Lydia Fucsko. Printed on 100% recycled stock 2 ARAZPA 2008 Year of the Frog Campaign Contents Foreword.........................................................................................................................................5 Foreword part II ………………………………………………………………………………………… ...6 Introduction.....................................................................................................................................9 Section 1: Why A Campaign?....................................................................................................11 The Connection Between Man and Nature........................................................................11 Man’s Effect on Nature ......................................................................................................11 Frogs Matter ......................................................................................................................11 The Problem ......................................................................................................................12 The Reason -
BOA5.1-2 Frog Biology, Taxonomy and Biodiversity
The Biology of Amphibians Agnes Scott College Mark Mandica Executive Director The Amphibian Foundation [email protected] 678 379 TOAD (8623) Phyllomedusidae: Agalychnis annae 5.1-2: Frog Biology, Taxonomy & Biodiversity Part 2, Neobatrachia Hylidae: Dendropsophus ebraccatus CLassification of Order: Anura † Triadobatrachus Ascaphidae Leiopelmatidae Bombinatoridae Alytidae (Discoglossidae) Pipidae Rhynophrynidae Scaphiopopidae Pelodytidae Megophryidae Pelobatidae Heleophrynidae Nasikabatrachidae Sooglossidae Calyptocephalellidae Myobatrachidae Alsodidae Batrachylidae Bufonidae Ceratophryidae Cycloramphidae Hemiphractidae Hylodidae Leptodactylidae Odontophrynidae Rhinodermatidae Telmatobiidae Allophrynidae Centrolenidae Hylidae Dendrobatidae Brachycephalidae Ceuthomantidae Craugastoridae Eleutherodactylidae Strabomantidae Arthroleptidae Hyperoliidae Breviceptidae Hemisotidae Microhylidae Ceratobatrachidae Conrauidae Micrixalidae Nyctibatrachidae Petropedetidae Phrynobatrachidae Ptychadenidae Ranidae Ranixalidae Dicroglossidae Pyxicephalidae Rhacophoridae Mantellidae A B † 3 † † † Actinopterygian Coelacanth, Tetrapodomorpha †Amniota *Gerobatrachus (Ray-fin Fishes) Lungfish (stem-tetrapods) (Reptiles, Mammals)Lepospondyls † (’frogomander’) Eocaecilia GymnophionaKaraurus Caudata Triadobatrachus 2 Anura Sub Orders Super Families (including Apoda Urodela Prosalirus †) 1 Archaeobatrachia A Hyloidea 2 Mesobatrachia B Ranoidea 1 Anura Salientia 3 Neobatrachia Batrachia Lissamphibia *Gerobatrachus may be the sister taxon Salientia Temnospondyls -
Herpetology 101 Aims to Teach Students the Basics of Reptile and Amphibian Biology While Instilling an Interest in Life and Animal Sciences
Splash Herpetology Goals: Herpetology 101 aims to teach students the basics of reptile and amphibian biology while instilling an interest in life and animal sciences. Materials Requested: We’re requesting a frog life cycle replica, a coral snake replica, and a red eared slider replica. These will cost $29.97, but it is expected to be a little over $30 with tax and shipping included (we will pay the rest if we need to). We would like to use these replicas to teach about animals we don’t have—for example, we obviously do not have a venomous, deadly coral snake, so we would like to have a replica to show people what to look for. We would also like a replica aquatic turtle to demonstrate the differences between terrestrial and aquatic chelonians, and a series of frog/tadpole replicas to demonstrate the amphibian life cycle. Class outline is below. We’ll spend our time going over the below information and observing and handling live reptiles and amphibians! ● Introduction to us and WISE ○ Who we are on campus ○ What animals we work with (herps and inverts) ● Introduction to reptiles and amphibians ○ Similarities: ectotherms, no fur or feathers, oviparous ○ Differences: amphibians have an aquatic larval stage, skin versus scales, some ovoviviparous reptiles versus all oviparous amphibs, amphibs poisonous while reptiles generally venomous, reptile eggs are leathery ● Amphibian biology ○ Study of amphibians: “Batrachology” ○ 7,000 species, 90% of which are frogs ○ Ecological indicator species ■ Skin is a secondary/primary respiratory organ ■ -
Chondrocranial and Oral Morphology of Pipoid Frogs Charles Christopher Swart
University of Richmond UR Scholarship Repository Master's Theses Student Research 1998 Chondrocranial and oral morphology of pipoid frogs Charles Christopher Swart Follow this and additional works at: http://scholarship.richmond.edu/masters-theses Part of the Biology Commons Recommended Citation Swart, Charles Christopher, "Chondrocranial and oral morphology of pipoid frogs" (1998). Master's Theses. Paper 1065. This Thesis is brought to you for free and open access by the Student Research at UR Scholarship Repository. It has been accepted for inclusion in Master's Theses by an authorized administrator of UR Scholarship Repository. For more information, please contact [email protected]. Chondrocranial and Oral Morphology of Pipoid Frogs by Charles Christopher Swart I certify that I have read this thesis and find that, in scope and quality, it satisfies the requirements for the degree of Master of Science. Dr.Joi<rlttayden Dr.G~;?j_~ T Other Faculty Members: TT Chondrocranial and Oral Morphology of Pipoid Frogs Charles Christopher Swart Masters of Science in Biology University of Richmond, 1998 Thesis Director: Rafael 0. de Sa Abstract. The Pipoidea are a diverse group of frogs. Their diversity is demonstrated in their morphology, ecology, and behavior. One pipoid species, Xenopus laevis, has been used as a model system of developmental, physiological, and molecular studies of vertebrates. My work has focused on the developmental morphology of the chondrocranium and oral morphology of four pipoid taxa: Hymenochirus boettgeri, Rhinophrynus dorsalis, Pipa carvalhoi, and Xenopus laevis. Previous studies have suggested that the Anura may be diphyletic based on the unique characteristics of the chondrocanial morphology of pipoids. -
A LIST of the VERTEBRATES of SOUTH AUSTRALIA
A LIST of the VERTEBRATES of SOUTH AUSTRALIA updates. for Edition 4th Editors See A.C. Robinson K.D. Casperson Biological Survey and Research Heritage and Biodiversity Division Department for Environment and Heritage, South Australia M.N. Hutchinson South Australian Museum Department of Transport, Urban Planning and the Arts, South Australia 2000 i EDITORS A.C. Robinson & K.D. Casperson, Biological Survey and Research, Biological Survey and Research, Heritage and Biodiversity Division, Department for Environment and Heritage. G.P.O. Box 1047, Adelaide, SA, 5001 M.N. Hutchinson, Curator of Reptiles and Amphibians South Australian Museum, Department of Transport, Urban Planning and the Arts. GPO Box 234, Adelaide, SA 5001updates. for CARTOGRAPHY AND DESIGN Biological Survey & Research, Heritage and Biodiversity Division, Department for Environment and Heritage Edition Department for Environment and Heritage 2000 4thISBN 0 7308 5890 1 First Edition (edited by H.J. Aslin) published 1985 Second Edition (edited by C.H.S. Watts) published 1990 Third Edition (edited bySee A.C. Robinson, M.N. Hutchinson, and K.D. Casperson) published 2000 Cover Photograph: Clockwise:- Western Pygmy Possum, Cercartetus concinnus (Photo A. Robinson), Smooth Knob-tailed Gecko, Nephrurus levis (Photo A. Robinson), Painted Frog, Neobatrachus pictus (Photo A. Robinson), Desert Goby, Chlamydogobius eremius (Photo N. Armstrong),Osprey, Pandion haliaetus (Photo A. Robinson) ii _______________________________________________________________________________________ CONTENTS -
Woinarski J. C. Z., Legge S. M., Woolley L. A., Palmer R., Dickman C
Woinarski J. C. Z., Legge S. M., Woolley L. A., Palmer R., Dickman C. R., Augusteyn J., Doherty T. S., Edwards G., Geyle H., McGregor H., Riley J., Turpin J., Murphy B.P. (2020) Predation by introduced cats Felis catus on Australian frogs: compilation of species records and estimation of numbers killed. Wildlife Research, Vol. 47, Iss. 8, Pp 580-588. DOI: https://doi.org/10.1071/WR19182 1 2 3 Predation by introduced cats Felis catus on Australian frogs: compilation of species’ 4 records and estimation of numbers killed. 5 6 7 J.C.Z. Woinarskia*, S.M. Leggeb, L.A. Woolleya,k, R. Palmerc, C.R. Dickmand, J. Augusteyne, T.S. Dohertyf, 8 G. Edwardsg, H. Geylea, H. McGregorh, J. Rileyi, J. Turpinj, and B.P. Murphya 9 10 a NESP Threatened Species Recovery Hub, Research Institute for the Environment and Livelihoods, 11 Charles Darwin University, Darwin, NT 0909, Australia 12 b NESP Threatened Species Recovery Hub, Centre for Biodiversity and Conservation Research, 13 University of Queensland, St Lucia, QLD 4072, Australia; AND Fenner School of the Environment and 14 Society, The Australian National University, Canberra, ACT 2602, Australia 15 c Western Australian Department of Biodiversity, Conservation and Attractions, Bentley, WA 6983, 16 Australia 17 d NESP Threatened Species Recovery Hub, Desert Ecology Research Group, School of Life and 18 Environmental Sciences, University of Sydney, NSW 2006, Australia 19 e Queensland Parks and Wildlife Service, Red Hill, QLD 4701, Australia 20 f Centre for Integrative Ecology, School of Life and Environmental Sciences (Burwood campus), Deakin 21 University, Geelong, VIC 3216, Australia 22 g Northern Territory Department of Land Resource Management, PO Box 1120, Alice Springs, NT 0871, 23 Australia 24 h NESP Threatened Species Recovery Hub, School of Biological Sciences, University of Tasmania, 25 Hobart, TAS 7001, Australia i School of Biological Sciences, University of Bristol, 24 Tyndall Ave, Bristol BS8 1TQ, United Kingdom. -
Diversity of Diversity of Anura
Diversity of Anura WFS 433/533 1/24/2013 Lecture goal To familiarize students with the different families of the order anura. To familiarize students with aspects of natural history and world distribution of anurans Required readings: Wells: pp. 15-41 http://amphibiaweb.org/aw/index.html Lecture roadmap Characteristics of Anurans Anuran Diversity Anuran families, natural history and world distribution 1 What are amphibians? These foul and loathsome animals are abhorrent because of their cold body, pale color, cartilaginous skeleton, filthy skin, fierce aspect, calculating eye, offensive smell, harsh voice, squalid habitation, and terrible venom; and so their Creator has not exerted his powers to make many of them. Carl von Linne (Linnaeus) Systema Naturae (1758) What are frogs? A thousand splendid suns, a million moons, a billion twinkle stars are nothing compared to the eyes of a frog in the swamp —Miss Piggy about Kermit, in Larry king live, 1993 Diversity of anurans Global Distribution 30 Families 4963 spec ies Groups: •Archaeobatrachia (4 families) •Mesobatrachia (5 families) 30 Families •Neobatrachia (all other families) 2 No. of Known Species in Number of Species Number of Species in Family World in the United States? Tennessee? Allophrynidae 10 0 Arthroleptidae 78 0 0 Ascaphidae 22 0 Bombinatoridae 11 0 0 Brachycephalidae 60 0 Bufonidae 457 23 2 Centrolenidae 139 0 0 Dendrobatidae 219 1* 0 Discoglossidae 11 0 0 Heleophrynidae 60 0 Hemisotidae 90 0 Hylidae 851 29* 10 Hyperoliidae 253 0 0 Leiopelmatidae 40 0 30 families Leptodactylidae -
Pliocene Frogs from Langebaanweg, Western Cape Province, South Africa
CORE Metadata, citation and similar papers at core.ac.uk Provided by Stellenbosch University SUNScholar Repository News & Views South African Journal of Science 99, March/April 2003 123 ers, are difficult to distinguish from those of the more slender of the Ranidae. How- Pliocene frogs from Langebaanweg, ever, several bones at Langebaanweg (comprising femur, humerus, ilium frag- Western Cape Province, South Africa ment, scapula, and sacrum) indicate either a third, gracile ranid genus or, more likely, a hyperoliid (compare Figs 2e and D. Eduard van Dijk* 2f). A very slender, nearly straight femur with a distinct, but short, posterior proxi- mal ridge is probably hyperoliid. The HE VARSWATER FORMATION AT LANGE- Ranoidea). Both families are present as femora of Pipidae, Bufonidae, Brevicipi- Tbaanweg, Western Cape Province, South fossils at Langebaanweg. tidae and most Ranidae have distinct Africa, is known particularly for its Late In the Pipidae (Fig. 1a), the transverse curvature; a ridge is rare in ranids, except Miocene–Early Pliocene mammalian and processes (diapophyses) are much ex- abundant avian fossils. Amphibian bones the genera of very small size. Bones of from the site are, like the avian bones, notable panded, with parallel lateral edges (rarely frogs of the only genus of the hyloidean for their variety, surpassed in numbers of fam- intact in fossils), and the paired facets family Heleophrynidae in southern ilies and genera by no site in Africa and few (prezygapophyses), which articulate with Africa are mostly similar to those of sites in the world. The bones were transported the presacral vertebrae, have longitudinal the Bufonidae. However, a distinctive by a river system from a variety of habitats and grooves. -
Tennessee Anuran Identification
Identification of Tennessee Anurans Hyla versicolor Matthew J. Gray College of Agricultural Sciences and Natural Resources University of Tennessee-Knoxville Suborder Suborder Mesobatrachia Anuran Families Neobatrachia Order Anura Bufonidae Scaphiopodidae Microhylidae 2 1 1 True Toads American Spadefoots Narrow-mouthed Toads Hylidae Ranidae 10 7 Tree Frogs True Frogs Morphological Characteristics Ranidae, Hylidae Bufonidae Glanular glands 1 Family American toad Bufonidae (Anaxyrus americanus) Eggs: 1-2 strings (4,000-12,000 eggs) >10 m length Breeding Call •Long, musical trill (constant) Breeding Season •Early (March) Characteristics: SVL = 3” • Parotoid glands rarely touch cranial crest • 1-2 glanular glands “warts” per dark spot Family American toad Bufonidae (Anaxyrus americanus) Distribution: EM http://www.apsu.edu/amatlas/ • Eastern United States • Statewide Family Fowler’s toad Bufonidae (Anaxyrus fowleri) Eggs: 1-2 strings (5,000-10,000 eggs) <3 m length Breeding Call •Nasal "w-a-a-h" •Sheep blea ting or baby crying Breeding Season •Mid (May) Characteristics: SVL = 2.5” • Parotoid glands touch cranial crest • >3 glanular glands “warts” per dark spot 2 Family Fowler’s toad Bufonidae (Anaxyrus fowleri) Distribution: EM http://www.apsu.edu/amatlas/ • Eastern United States • Statewide Family Eastern spadefoot Scaphiopodidae (Scaphiopus holbrookii) Metatarsal tubercle Breeding Call •Nasal grunts: “wahh,,, wahh, wahh” •Young crow Breeding Season T-storms SVL = 2” •Late (June,July) Characteristics: (heavy rain) • Vertical Pupil • Glanular