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Bioseries12-Amphibians-Taita-English
0c m 12 Symbol key 3456 habitat pond puddle river stream 78 underground day / night day 9101112131415161718 night altitude high low vegetation types shamba forest plantation prelim pages ENGLISH.indd ii 2009/10/22 02:03:47 PM SANBI Biodiversity Series Amphibians of the Taita Hills by G.J. Measey, P.K. Malonza and V. Muchai 2009 prelim pages ENGLISH.indd Sec1:i 2009/10/27 07:51:49 AM SANBI Biodiversity Series The South African National Biodiversity Institute (SANBI) was established on 1 September 2004 through the signing into force of the National Environmental Management: Biodiversity Act (NEMBA) No. 10 of 2004 by President Thabo Mbeki. The Act expands the mandate of the former National Botanical Institute to include responsibilities relating to the full diversity of South Africa’s fauna and ora, and builds on the internationally respected programmes in conservation, research, education and visitor services developed by the National Botanical Institute and its predecessors over the past century. The vision of SANBI: Biodiversity richness for all South Africans. SANBI’s mission is to champion the exploration, conservation, sustainable use, appreciation and enjoyment of South Africa’s exceptionally rich biodiversity for all people. SANBI Biodiversity Series publishes occasional reports on projects, technologies, workshops, symposia and other activities initiated by or executed in partnership with SANBI. Technical editor: Gerrit Germishuizen Design & layout: Elizma Fouché Cover design: Elizma Fouché How to cite this publication MEASEY, G.J., MALONZA, P.K. & MUCHAI, V. 2009. Amphibians of the Taita Hills / Am bia wa milima ya Taita. SANBI Biodiversity Series 12. South African National Biodiversity Institute, Pretoria. -
An Action Plan for Darwin's Frogs Brings Key Stakeholders Together
A flagship for Austral temperate forest conservation: an action plan for Darwin's frogs brings key stakeholders together C LAUDIO A ZAT,ANDRÉS V ALENZUELA-SÁNCHEZ,SOLEDAD D ELGADO A NDREW A. CUNNINGHAM,MARIO A LVARADO-RYBAK,JOHARA B OURKE R AÚL B RIONES,OSVALDO C ABEZA,CAMILA C ASTRO-CARRASCO,ANDRES C HARRIER C LAUDIO C ORREA,MARTHA L. CRUMP,CÉSAR C. CUEVAS,MARIANO DE LA M AZA S ANDRA D ÍAZ-VIDAL,EDGARDO F LORES,GEMMA H ARDING,ESTEBAN O. LAVILLA M ARCO A. MENDEZ,FRANK O BERWEMMER,JUAN C ARLOS O RTIZ,HERNÁN P ASTORE A LEXANDRA P EÑAFIEL-RICAURTE,LEONORA R OJAS-SALINAS J OSÉ M ANUEL S ERRANO,MAXIMILIANO A. SEPÚLVEDA,VERÓNICA T OLEDO C ARMEN Ú BEDA,DAVID E. URIBE-RIVERA,CATALINA V ALDIVIA S ALLY W REN and A RIADNE A NGULO Abstract Darwin’sfrogsRhinoderma darwinii and Rhino- the Austral temperate forests of Chile and Argentina. This derma rufum are the only known species of amphibians recommendation forms part of the vision of the Bination- in which males brood their offspring in their vocal sacs. We al Conservation Strategy for Darwin’sFrogs,whichwas propose these frogs as flagship species for the conservation of launched in . The strategy is a conservation initiative CLAUDIO AZAT* (Corresponding author, orcid.org/0000-0001-9201-7886), EDGARDO FLORES* Fundación Nahuelbuta Natural, Cañete, Chile MARIO ALVARADO-RYBAK*, ALEXANDRA PEÑAFIEL-RICAURTE* and CATALINA VALDIVIA GEMMA HARDING* Durrell Institute of Conservation and Ecology, School of Sustainability Research Centre, Life Sciences Faculty, Universidad Andres Anthropology and Conservation, University of Kent, Canterbury, UK Bello, Republica 440, Santiago, Chile. -
Biogeographic Analysis Reveals Ancient Continental Vicariance and Recent Oceanic Dispersal in Amphibians ∗ R
Syst. Biol. 63(5):779–797, 2014 © The Author(s) 2014. Published by Oxford University Press, on behalf of the Society of Systematic Biologists. All rights reserved. For Permissions, please email: [email protected] DOI:10.1093/sysbio/syu042 Advance Access publication June 19, 2014 Biogeographic Analysis Reveals Ancient Continental Vicariance and Recent Oceanic Dispersal in Amphibians ∗ R. ALEXANDER PYRON Department of Biological Sciences, The George Washington University, 2023 G Street NW, Washington, DC 20052, USA; ∗ Correspondence to be sent to: Department of Biological Sciences, The George Washington University, 2023 G Street NW, Washington, DC 20052, USA; E-mail: [email protected]. Received 13 February 2014; reviews returned 17 April 2014; accepted 13 June 2014 Downloaded from Associate Editor: Adrian Paterson Abstract.—Amphibia comprises over 7000 extant species distributed in almost every ecosystem on every continent except Antarctica. Most species also show high specificity for particular habitats, biomes, or climatic niches, seemingly rendering long-distance dispersal unlikely. Indeed, many lineages still seem to show the signature of their Pangaean origin, approximately 300 Ma later. To date, no study has attempted a large-scale historical-biogeographic analysis of the group to understand the distribution of extant lineages. Here, I use an updated chronogram containing 3309 species (~45% of http://sysbio.oxfordjournals.org/ extant diversity) to reconstruct their movement between 12 global ecoregions. I find that Pangaean origin and subsequent Laurasian and Gondwanan fragmentation explain a large proportion of patterns in the distribution of extant species. However, dispersal during the Cenozoic, likely across land bridges or short distances across oceans, has also exerted a strong influence. -
Evaluating Methods for Phylogenomic Analyses, and a New Phylogeny for a Major Frog Clade
Molecular Phylogenetics and Evolution 119 (2018) 128–143 Contents lists available at ScienceDirect Molecular Phylogenetics and Evolution journal homepage: www.elsevier.com/locate/ympev Evaluating methods for phylogenomic analyses, and a new phylogeny for a MARK major frog clade (Hyloidea) based on 2214 loci ⁎ Jeffrey W. Streichera,b, , Elizabeth C. Millera, Pablo C. Guerreroc,d, Claudio Corread, Juan C. Ortizd, Andrew J. Crawforde, Marcio R. Pief, John J. Wiensa a Department of Ecology and Evolutionary Biology, University of Arizona, Tucson, AZ 85721, USA b Department of Life Sciences, The Natural History Museum, London SW7 5BD, UK c Institute of Ecology and Biodiversity, Faculty of Sciences, University of Chile, 780-0024 Santiago, Chile d Facultad de Ciencias Naturales & Oceanográficas, Universidad de Concepción, Concepción, Chile e Department of Biological Sciences, Universidad de los Andes, A.A. 4976 Bogotá, Colombia f Departamento de Zoologia, Universidade Federal do Paraná, Curitiba, Paraná, Brazil ARTICLE INFO ABSTRACT Keywords: Phylogenomic approaches offer a wealth of data, but a bewildering diversity of methodological choices. These Amphibia choices can strongly affect the resulting topologies. Here, we explore two controversial approaches (binning Anura genes into “supergenes” and inclusion of only rapidly evolving sites), using new data from hyloid frogs. Hyloid Biogeography frogs encompass ∼53% of frog species, including true toads (Bufonidae), glassfrogs (Centrolenidae), poison Naive binning frogs (Dendrobatidae), and treefrogs (Hylidae). Many hyloid families are well-established, but relationships Phylogenomics among these families have remained difficult to resolve. We generated a dataset of ultraconserved elements Statistical binning (UCEs) for 50 ingroup species, including 18 of 19 hyloid families and up to 2214 loci spanning > 800,000 aligned base pairs. -
Lissamphibia)
The evolution of intrauterine feeding in the Gymnophiona (Lissamphibia) A comparative study on the morphology, function, and development of cranial muscles in oviparous and viviparous species Thomas Kleinteich Zusammenfassung 7 Summary 9 Introduction 11 Chapter 1: The hyal and ventral branchial muscles in caecilian and salamander larvae: homologies and evolution 23 Chapter 2: Cranial muscle development in direct developing oviparous and in viviparous caecilians 59 Chapter 3: Allometric growth and heterochrony in the cranial development of oviparous and viviparous caecilians – a geometric morphometric study 97 Chapter 4: Feeding biomechanics during caecilian development: functional consequences for suction feeding, scraping, and biting 129 Synopsis: The evolution of intrauterine feeding in caecilians 163 Acknowledgments 175 Die rezenten Amphibien (Lissamphibia) sind durch einen komplexen biphasischen Lebenszyklus gekennzeichnet. Sie durchlaufen eine Metamorphose, bei der sich eine aquatische Larve zum terrestrischen Adultus entwickelt. Im Zusammenhang mit dem biphasischen Lebenszyklus gilt Oviparie als ursprünglicher Fortpflanzungsmodus für die Lissamphibia. In allen drei Gruppen der Amphibien, d.h. innerhalb der Froschlurche (Anura), Schwanzlurche (Caudata) und Blindwühlen (Gymnophiona), sind abgeleitete Fortpflanzungsmodi (Oviparie mit direkter Entwicklung, Viviparie) evolviert. Innerhalb der Blindwühlen ist die Evolution von abgeleiteten Fortpflanzungsmodi mit neuen Beutefangmechanismen während der Ontogenese verbunden: Im ursprünglichen -
The Butterflies of Taita Hills
FLUTTERING BEAUTY WITH BENEFITS THE BUTTERFLIES OF TAITA HILLS A FIELD GUIDE Esther N. Kioko, Alex M. Musyoki, Augustine E. Luanga, Oliver C. Genga & Duncan K. Mwinzi FLUTTERING BEAUTY WITH BENEFITS: THE BUTTERFLIES OF TAITA HILLS A FIELD GUIDE TO THE BUTTERFLIES OF TAITA HILLS Esther N. Kioko, Alex M. Musyoki, Augustine E. Luanga, Oliver C. Genga & Duncan K. Mwinzi Supported by the National Museums of Kenya and the JRS Biodiversity Foundation ii FLUTTERING BEAUTY WITH BENEFITS: THE BUTTERFLIES OF TAITA HILLS Dedication In fond memory of Prof. Thomas R. Odhiambo and Torben B. Larsen Prof. T. R. Odhiambo’s contribution to insect studies in Africa laid a concrete footing for many of today’s and future entomologists. Torben Larsen’s contribution to the study of butterflies in Kenya and their natural history laid a firm foundation for the current and future butterfly researchers, enthusiasts and rearers. National Museums of Kenya’s mission is to collect, preserve, study, document and present Kenya’s past and present cultural and natural heritage. This is for the purposes of enhancing knowledge, appreciation, respect and sustainable utilization of these resources for the benefit of Kenya and the world, for now and posterity. Copyright © 2021 National Museums of Kenya. Citation Kioko, E. N., Musyoki, A. M., Luanga, A. E., Genga, O. C. & Mwinzi, D. K. (2021). Fluttering beauty with benefits: The butterflies of Taita Hills. A field guide. National Museums of Kenya, Nairobi, Kenya. ISBN 9966-955-38-0 iii FLUTTERING BEAUTY WITH BENEFITS: THE BUTTERFLIES OF TAITA HILLS FOREWORD The Taita Hills are particularly diverse but equally endangered. -
3Systematics and Diversity of Extant Amphibians
Systematics and Diversity of 3 Extant Amphibians he three extant lissamphibian lineages (hereafter amples of classic systematics papers. We present widely referred to by the more common term amphibians) used common names of groups in addition to scientifi c Tare descendants of a common ancestor that lived names, noting also that herpetologists colloquially refer during (or soon after) the Late Carboniferous. Since the to most clades by their scientifi c name (e.g., ranids, am- three lineages diverged, each has evolved unique fea- bystomatids, typhlonectids). tures that defi ne the group; however, salamanders, frogs, A total of 7,303 species of amphibians are recognized and caecelians also share many traits that are evidence and new species—primarily tropical frogs and salaman- of their common ancestry. Two of the most defi nitive of ders—continue to be described. Frogs are far more di- these traits are: verse than salamanders and caecelians combined; more than 6,400 (~88%) of extant amphibian species are frogs, 1. Nearly all amphibians have complex life histories. almost 25% of which have been described in the past Most species undergo metamorphosis from an 15 years. Salamanders comprise more than 660 species, aquatic larva to a terrestrial adult, and even spe- and there are 200 species of caecilians. Amphibian diver- cies that lay terrestrial eggs require moist nest sity is not evenly distributed within families. For example, sites to prevent desiccation. Thus, regardless of more than 65% of extant salamanders are in the family the habitat of the adult, all species of amphibians Plethodontidae, and more than 50% of all frogs are in just are fundamentally tied to water. -
Systematic Review of the Frog Family Hylidae, with Special Reference to Hylinae: Phylogenetic Analysis and Taxonomic Revision
SYSTEMATIC REVIEW OF THE FROG FAMILY HYLIDAE, WITH SPECIAL REFERENCE TO HYLINAE: PHYLOGENETIC ANALYSIS AND TAXONOMIC REVISION JULIAÂ N FAIVOVICH Division of Vertebrate Zoology (Herpetology), American Museum of Natural History Department of Ecology, Evolution, and Environmental Biology (E3B) Columbia University, New York, NY ([email protected]) CEÂ LIO F.B. HADDAD Departamento de Zoologia, Instituto de BiocieÃncias, Unversidade Estadual Paulista, C.P. 199 13506-900 Rio Claro, SaÄo Paulo, Brazil ([email protected]) PAULO C.A. GARCIA Universidade de Mogi das Cruzes, AÂ rea de CieÃncias da SauÂde Curso de Biologia, Rua CaÃndido Xavier de Almeida e Souza 200 08780-911 Mogi das Cruzes, SaÄo Paulo, Brazil and Museu de Zoologia, Universidade de SaÄo Paulo, SaÄo Paulo, Brazil ([email protected]) DARREL R. FROST Division of Vertebrate Zoology (Herpetology), American Museum of Natural History ([email protected]) JONATHAN A. CAMPBELL Department of Biology, The University of Texas at Arlington Arlington, Texas 76019 ([email protected]) WARD C. WHEELER Division of Invertebrate Zoology, American Museum of Natural History ([email protected]) BULLETIN OF THE AMERICAN MUSEUM OF NATURAL HISTORY CENTRAL PARK WEST AT 79TH STREET, NEW YORK, NY 10024 Number 294, 240 pp., 16 ®gures, 2 tables, 5 appendices Issued June 24, 2005 Copyright q American Museum of Natural History 2005 ISSN 0003-0090 CONTENTS Abstract ....................................................................... 6 Resumo ....................................................................... -
Standard Guidelines for the Captive Keeping of Anurans
Standard Guidelines for the Captive Keeping of Anurans Developed by the Workgroup Anurans of the Deutsche Gesellschaft für Herpetologie und Terrarienkunde (DGHT) e. V. Informations about the booklet The amphibian table benefi ted from the participation of the following specialists: Dr. Beat Akeret: Zoologist, Ecologist and Scientist in Nature Conserva- tion; President of the DGHT Regional Group Switzerland and the DGHT City Group Zurich Dr. Samuel Furrer: Zoologist; Curator of Amphibians and Reptiles of the Zurich Zoological Gardens (until 2017) Prof. Dr. Stefan Lötters: Zoologist; Docent at the University of Trier for Herpeto- logy, specialising in amphibians; Member of the Board of the DGHT Workgroup Anurans Dr. Peter Janzen: Zoologist, specialising in amphibians; Chairman and Coordinator of the Conservation Breeding Project “Amphibian Ark” Detlef Papenfuß, Ulrich Schmidt, Ralf Schmitt, Stefan Ziesmann, Frank Malz- korn: Members of the Board of the DGHT Workgroup Anurans Dr. Axel Kwet: Zoologist, amphibian specialist; Management and Editorial Board of the DGHT Bianca Opitz: Layout and Typesetting Thomas Ulber: Translation, Herprint International A wide range of other specialists provided important additional information and details that have been Oophaga pumilio incorporated in the amphibian table. Poison Dart Frog page 2 Foreword Dear Reader, keeping anurans in an expertly manner means taking an interest in one of the most fascinating groups of animals that, at the same time, is a symbol of the current threats to global biodiversity and an indicator of progressing climate change. The contribution that private terrarium keeping is able to make to researching the biology of anurans is evident from the countless publications that have been the result of individuals dedicating themselves to this most attractive sector of herpetology. -
1704632114.Full.Pdf
Phylogenomics reveals rapid, simultaneous PNAS PLUS diversification of three major clades of Gondwanan frogs at the Cretaceous–Paleogene boundary Yan-Jie Fenga, David C. Blackburnb, Dan Lianga, David M. Hillisc, David B. Waked,1, David C. Cannatellac,1, and Peng Zhanga,1 aState Key Laboratory of Biocontrol, College of Ecology and Evolution, School of Life Sciences, Sun Yat-Sen University, Guangzhou 510006, China; bDepartment of Natural History, Florida Museum of Natural History, University of Florida, Gainesville, FL 32611; cDepartment of Integrative Biology and Biodiversity Collections, University of Texas, Austin, TX 78712; and dMuseum of Vertebrate Zoology and Department of Integrative Biology, University of California, Berkeley, CA 94720 Contributed by David B. Wake, June 2, 2017 (sent for review March 22, 2017; reviewed by S. Blair Hedges and Jonathan B. Losos) Frogs (Anura) are one of the most diverse groups of vertebrates The poor resolution for many nodes in anuran phylogeny is and comprise nearly 90% of living amphibian species. Their world- likely a result of the small number of molecular markers tra- wide distribution and diverse biology make them well-suited for ditionally used for these analyses. Previous large-scale studies assessing fundamental questions in evolution, ecology, and conser- used 6 genes (∼4,700 nt) (4), 5 genes (∼3,800 nt) (5), 12 genes vation. However, despite their scientific importance, the evolutionary (6) with ∼12,000 nt of GenBank data (but with ∼80% missing history and tempo of frog diversification remain poorly understood. data), and whole mitochondrial genomes (∼11,000 nt) (7). In By using a molecular dataset of unprecedented size, including 88-kb the larger datasets (e.g., ref. -
Phylogenetics, Classification, and Biogeography of the Treefrogs (Amphibia: Anura: Arboranae)
Zootaxa 4104 (1): 001–109 ISSN 1175-5326 (print edition) http://www.mapress.com/j/zt/ Monograph ZOOTAXA Copyright © 2016 Magnolia Press ISSN 1175-5334 (online edition) http://doi.org/10.11646/zootaxa.4104.1.1 http://zoobank.org/urn:lsid:zoobank.org:pub:D598E724-C9E4-4BBA-B25D-511300A47B1D ZOOTAXA 4104 Phylogenetics, classification, and biogeography of the treefrogs (Amphibia: Anura: Arboranae) WILLIAM E. DUELLMAN1,3, ANGELA B. MARION2 & S. BLAIR HEDGES2 1Biodiversity Institute, University of Kansas, 1345 Jayhawk Blvd., Lawrence, Kansas 66045-7593, USA 2Center for Biodiversity, Temple University, 1925 N 12th Street, Philadelphia, Pennsylvania 19122-1601, USA 3Corresponding author. E-mail: [email protected] Magnolia Press Auckland, New Zealand Accepted by M. Vences: 27 Oct. 2015; published: 19 Apr. 2016 WILLIAM E. DUELLMAN, ANGELA B. MARION & S. BLAIR HEDGES Phylogenetics, Classification, and Biogeography of the Treefrogs (Amphibia: Anura: Arboranae) (Zootaxa 4104) 109 pp.; 30 cm. 19 April 2016 ISBN 978-1-77557-937-3 (paperback) ISBN 978-1-77557-938-0 (Online edition) FIRST PUBLISHED IN 2016 BY Magnolia Press P.O. Box 41-383 Auckland 1346 New Zealand e-mail: [email protected] http://www.mapress.com/j/zt © 2016 Magnolia Press All rights reserved. No part of this publication may be reproduced, stored, transmitted or disseminated, in any form, or by any means, without prior written permission from the publisher, to whom all requests to reproduce copyright material should be directed in writing. This authorization does not extend to any other kind of copying, by any means, in any form, and for any purpose other than private research use. -
Biogeography of the Nearly Cosmopolitan True Toads (Anura: Bufonidae) Jennifer B
Global Ecology and Biogeography, (Global Ecol. Biogeogr.) (2007) Blackwell Publishing Ltd RESEARCH Around the world in 10 million years: PAPER biogeography of the nearly cosmopolitan true toads (Anura: Bufonidae) Jennifer B. Pramuk1*, Tasia Robertson2, Jack W. Sites Jr2 and Brice P. Noonan3 1Department of Herpetology, Bronx Zoo/ ABSTRACT Wildlife Conservation Society, 2300 Southern Aim The species-rich family of true toads (Anura: Bufonidae) has been the focus of Boulevard, Bronx, NY 10460, USA, 2Brigham Young University, Department of several earlier studies investigating the biogeography of geographically widespread Integrative Biology, Provo, UT 84602, USA, taxa. Herein, we employ newly developed Bayesian divergence estimate methods to 3Duke University, Department of Biology, investigate the biogeographical history of this group. Resulting age estimates are Durham, NC 27708, USA used to test several key temporal hypotheses including that the origin of the bufonid clade pre-dates Gondwanan vicariance (~105 million years ago, Ma). Area cladograms are also invoked to investigate the geographical origin of the family. Location Worldwide, except the Australia–New Guinea plate, Madagascar and the Antarctic. Methods A phylogenetic hypothesis of the relationships among true toads was derived from analysis of 2521 bp of DNA data including fragments from three mitochondrial (12S, tRNAval, 16S) and two nuclear (RAG-1, CXCR-4) genes. Analysis of multiple, unlinked loci with a Bayesian method for estimating divergence times allowed us to address the timing and biogeographical history of Bufonidae. Resulting divergence estimates permitted the investigation of alternative vicariance/dispersal scenarios that have been proposed for true toads. Results Our area cladogram resulting from phylogenetic analysis of DNA data supports a South American origin for Bufonidae.