A SEM-Study of Some Types of Nivicolous Physarales
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
Zygote Gene Expression and Plasmodial Development in Didymium Iridis
DePaul University Via Sapientiae College of Science and Health Theses and Dissertations College of Science and Health Summer 8-25-2019 Zygote gene expression and plasmodial development in Didymium iridis Sean Schaefer DePaul University, [email protected] Follow this and additional works at: https://via.library.depaul.edu/csh_etd Part of the Biology Commons Recommended Citation Schaefer, Sean, "Zygote gene expression and plasmodial development in Didymium iridis" (2019). College of Science and Health Theses and Dissertations. 322. https://via.library.depaul.edu/csh_etd/322 This Thesis is brought to you for free and open access by the College of Science and Health at Via Sapientiae. It has been accepted for inclusion in College of Science and Health Theses and Dissertations by an authorized administrator of Via Sapientiae. For more information, please contact [email protected]. Zygote gene expression and plasmodial development in Didymium iridis A Thesis presented in Partial fulfillment of the Requirements for the Degree of Master of Biology By Sean Schaefer 2019 Advisor: Dr. Margaret Silliker Department of Biological Sciences College of Liberal Arts and Sciences DePaul University Chicago, IL Abstract: Didymium iridis is a cosmopolitan species of plasmodial slime mold consisting of two distinct life stages. Haploid amoebae and diploid plasmodia feed on microscopic organisms such as bacteria and fungi through phagocytosis. Sexually compatible haploid amoebae act as gametes which when fused embark on an irreversible developmental change resulting in a diploid zygote. The zygote can undergo closed mitosis resulting in a multinucleated plasmodium. Little is known about changes in gene expression during this developmental transition. Our principal goal in this study was to provide a comprehensive list of genes likely to be involved in plasmodial development. -
Slime Moulds
Queen’s University Biological Station Species List: Slime Molds The current list has been compiled by Richard Aaron, a naturalist and educator from Toronto, who has been running the Fabulous Fall Fungi workshop at QUBS between 2009 and 2019. Dr. Ivy Schoepf, QUBS Research Coordinator, edited the list in 2020 to include full taxonomy and information regarding species’ status using resources from The Natural Heritage Information Centre (April 2018) and The IUCN Red List of Threatened Species (February 2018); iNaturalist and GBIF. Contact Ivy to report any errors, omissions and/or new sightings. Based on the aforementioned criteria we can expect to find a total of 33 species of slime molds (kingdom: Protozoa, phylum: Mycetozoa) present at QUBS. Species are Figure 1. One of the most commonly encountered reported using their full taxonomy; common slime mold at QUBS is the Dog Vomit Slime Mold (Fuligo septica). Slime molds are unique in the way name and status, based on whether the species is that they do not have cell walls. Unlike fungi, they of global or provincial concern (see Table 1 for also phagocytose their food before they digest it. details). All species are considered QUBS Photo courtesy of Mark Conboy. residents unless otherwise stated. Table 1. Status classification reported for the amphibians of QUBS. Global status based on IUCN Red List of Threatened Species rankings. Provincial status based on Ontario Natural Heritage Information Centre SRank. Global Status Provincial Status Extinct (EX) Presumed Extirpated (SX) Extinct in the -
Biodiversity of Plasmodial Slime Moulds (Myxogastria): Measurement and Interpretation
Protistology 1 (4), 161–178 (2000) Protistology August, 2000 Biodiversity of plasmodial slime moulds (Myxogastria): measurement and interpretation Yuri K. Novozhilova, Martin Schnittlerb, InnaV. Zemlianskaiac and Konstantin A. Fefelovd a V.L.Komarov Botanical Institute of the Russian Academy of Sciences, St. Petersburg, Russia, b Fairmont State College, Fairmont, West Virginia, U.S.A., c Volgograd Medical Academy, Department of Pharmacology and Botany, Volgograd, Russia, d Ural State University, Department of Botany, Yekaterinburg, Russia Summary For myxomycetes the understanding of their diversity and of their ecological function remains underdeveloped. Various problems in recording myxomycetes and analysis of their diversity are discussed by the examples taken from tundra, boreal, and arid areas of Russia and Kazakhstan. Recent advances in inventory of some regions of these areas are summarised. A rapid technique of moist chamber cultures can be used to obtain quantitative estimates of myxomycete species diversity and species abundance. Substrate sampling and species isolation by the moist chamber technique are indispensable for myxomycete inventory, measurement of species richness, and species abundance. General principles for the analysis of myxomycete diversity are discussed. Key words: slime moulds, Mycetozoa, Myxomycetes, biodiversity, ecology, distribu- tion, habitats Introduction decay (Madelin, 1984). The life cycle of myxomycetes includes two trophic stages: uninucleate myxoflagellates General patterns of community structure of terrestrial or amoebae, and a multi-nucleate plasmodium (Fig. 1). macro-organisms (plants, animals, and macrofungi) are The entire plasmodium turns almost all into fruit bodies, well known. Some mathematics methods are used for their called sporocarps (sporangia, aethalia, pseudoaethalia, or studying, from which the most popular are the quantita- plasmodiocarps). -
Slime Molds: Biology and Diversity
Glime, J. M. 2019. Slime Molds: Biology and Diversity. Chapt. 3-1. In: Glime, J. M. Bryophyte Ecology. Volume 2. Bryological 3-1-1 Interaction. Ebook sponsored by Michigan Technological University and the International Association of Bryologists. Last updated 18 July 2020 and available at <https://digitalcommons.mtu.edu/bryophyte-ecology/>. CHAPTER 3-1 SLIME MOLDS: BIOLOGY AND DIVERSITY TABLE OF CONTENTS What are Slime Molds? ....................................................................................................................................... 3-1-2 Identification Difficulties ...................................................................................................................................... 3-1- Reproduction and Colonization ........................................................................................................................... 3-1-5 General Life Cycle ....................................................................................................................................... 3-1-6 Seasonal Changes ......................................................................................................................................... 3-1-7 Environmental Stimuli ............................................................................................................................... 3-1-13 Light .................................................................................................................................................... 3-1-13 pH and Volatile Substances -
Physarum Polycephalum) by SPME
Analysis of the volatiles in the headspace above the plasmodium and sporangia of the slime mould (Physarum polycephalum) by SPME- GCMS Huda al Kateb1 and Ben de Lacy Costello1 1Institute for biosensing technology, University of the West of England, Bristol, BS161QY, UK E-mail: [email protected] Abstract Solid phase micro-extraction (SPME) coupled with Gas Chromatography Mass Spectrometry (GC-MS) was used to extract and analyse the volatiles in the headspace above the plasmodial and sporulating stages of the slime mould Physarum Polycephalum. In total 115 compounds were identified from across a broad range of chemical classes. Although more (87) volatile organic compounds (VOCs) were identified when using a higher incubation temperature of 75oC, a large number of compounds (79) were still identified at the lower extraction temperature of 30oC and where the plasmodial stage was living. Far fewer compounds were extracted after sporulation at the two extraction temperatures. There were some marked differences between the VOCs identified in the plasmodial stage and after sporulation. In particular the nitrogen containing compounds acetonitrile, pyrrole, 2, 5-dimethyl-pyrazine and trimethyl pyrazine seemed to be associated with the sporulating stage. There were many compounds associated predominantly with the plasmodial stage including a number of furans and alkanes. Interestingly, a number of known fungal metabolites were identified including 1-octen-3- ol, 3-octanone, 1-octen-3-one, 3-octanol. In addition known metabolites of cyanobacteria and actinobacteria in particular geosmin was identified in the headspace. Volatile metabolites that had previously been identified as having a positive chemotactic response to the plasmodial stage of P. -
Myxomyceten (Schleimpilze) Und Mycetozoa (Pilztiere) - Lebensform Zwischen Pflanze Und Tier 7-37 © Biologiezentrum Linz/Austria; Download Unter
ZOBODAT - www.zobodat.at Zoologisch-Botanische Datenbank/Zoological-Botanical Database Digitale Literatur/Digital Literature Zeitschrift/Journal: Stapfia Jahr/Year: 2000 Band/Volume: 0073 Autor(en)/Author(s): Nowotny Wolfgang Artikel/Article: Myxomyceten (Schleimpilze) und Mycetozoa (Pilztiere) - Lebensform zwischen Pflanze und Tier 7-37 © Biologiezentrum Linz/Austria; download unter www.biologiezentrum.at Myxomyceten (Schleimpilze) und Mycetozoa (Pilztiere) - Lebensformen zwischen Pflanze und Tier W. NOWOTNY Abstract Myxomycetes (slime molds) and Myce- structures is described in detail. In the tozoa (fungal animals) - Intermediate chapters "Distribution and Phenology" as forms between plant and animal. well as "Habitats and Substrata" mainly Myxomycetes and Mycetozoa are extra- own experiences from Upper Austria are ordinary, but not widely known largely taken into account. Relations to other or- microscopic organisms. Some terminologi- ganisms including humans could only be cal considerations are followed by a short exemplified. A glossary and a classification history of research. The complex life cycle of subclasses, orders, families and genera including spores, myxoflagellates, plasmo- of myxomycetes should fasciliate a basic dia and fructifications with their particular overview. Inhalt 1. Einleitung 8 2. Entwicklungszyklus der Myxomyceten 9 2.1. Sporen 11 2.2. Myxoflagellaten und Mikrozysten 13 2.3. Plasmodium und Sklerotium 14 2.4- Bildung der Fruktifikationen 16 2.4.1. Sporocarpien, Plasmodiocarpien, Aethalien und Pseudoaethalien 17 2.4.2. Strukturen der Fruktifikationen 19 3. Verbreitung und Phänologie 25 4- Lebensraum und Substrate 28 4-1. Myxomyceten auf Borke lebender Bäume in feuchter Kammer 29 42. Nivicole Myxomyceten 30 5. Beziehung zu anderen Lebewesen 31 6. Nomenklatur 32 7. Glossar 33 Stapfia 73, 8. -
Physarum Polycephalum (Plasmodial Slime Mold)
Physarum polycephalum (plasmodial slime mold) Species: polycephalum Genus: Physarum Family: Physaraceae Order: Physarales Class: Myxomycetes Phylum: Mycetozoa Kingdom: Amoebozoa Conditions for Customer Ownership We hold permits allowing us to transport these organisms. To access permit conditions, click here. Never purchase living specimens without having a disposition strategy in place. There are currently no USDA permits required for this organism. In order to protect our environment, never release a live laboratory organism into the wild. Primary Hazard Considerations Always wash your hands thoroughly before and after you handle your cultures, or anything it has touched. It is recommended to use gloves when working with mold, fungus, or bacteria. Availability Physarum is available year round. Care Habitat • Plasmodial stage are shipped in a Petri dish on Physarum agar with oats. Your Physarum should be bright yellow in color, and fan shaped. If your Physarum takes on a different appearance it may be contaminated. Contaminated cultures occur when a foreign specimen (something other than Physarum) makes its way onto your culture. This culture should be stored at room temperature in a dark place. The culture should be viable for about 1–2 weeks in its current container. • Sclerotia are hardened masses of irregular form consisting of many minute cell-like components. These are shipped on cut strips of filter paper in a tube. The culture should be stored at room temperature and can be stored in this stage for several months. Care: • Physarum is subcultured onto Physarum agar, and is incubated at room temperature or 25 °C. To maintain viability, plasmodial Physarum should be subcultured weekly. -
Four New Records for Physarales from Turkey
G. DEMİREL, G. KAŞIK Turk J Bot 36 (2012) 95-100 © TÜBİTAK Research Article doi:10.3906/bot-1010-12 Four new records for Physarales from Turkey Gönül DEMİREL, Gıyasettin KAŞIK Biology Department, Science Faculty, Selçuk University, 42031 Konya - TURKEY Received: 06.10.2010 Accepted: 17.06.2011 Abstract: Physarum didermoides (Pers.) Rostaf., Physarum gyrosum Rostaf., Didymium karstensii Nann.-Bremek., and Didymium trachysporum G.Lister, taxa grown by moist chamber culture method, are 4 new records from Turkey. Key words: Physarales, Physarum, Didymium, new record, Konya, Turkey Türkiye’den Physarales için dört yeni kayıt Özet: Nem odası tekniğiyle geliştirilen Physarum didermoides (Pers.) Rostaf., Physarum gyrosum Rostaf., Didymium karstensii Nann.-Bremek., Didymium trachysporum G.Lister taksonları Türkiye’den 4 yeni kayıttır. Anahtar sözcükler: Physarales, Physarum, Didymium, yeni kayıt, Konya, Türkiye Introduction show parallelism. In recent years some macrofungi Myxomycetes (plasmodial slime moulds) are and Myxomycetes have been added to the Turkish primitive phagotrophic eukaryotes that generally myxobiota by some researchers (Dülger, 2008; occur in association with decaying or living plant Doğan & Karadelev, 2009; Alkan et al., 2010; Doğan material in terrestrial forest ecosystems. Th e et al., 2011). To date, only 1974 macrofungi and 222 Myxomycetes life cycle involves 2 morphologically Myxomycetes taxa have been determined in Turkey distinct stages: one consisting of uninucleate amoebae, (Sesli & Denchev, 2010). with or without fl agella, and the other a distinctive multinucleate structure, plasmodium (Martin et al., 1983). A signifi cant number of Myxomycetes samples Materials and methods are cosmopolite organisms. Th e materials appropriate for the growth of Th e climate and ecologic features of Turkey are Myxomycetes were collected in Hadim (Konya, very suitable for the growth of fungi (especially Turkey) district on various occasions during the macrofungi and Myxomycetes). -
Myxomycetes of Taiwan XXIV. the Genus Physarum
Taiwania, 58(3): 176‒188, 2013 DOI: 10.6165/tai.2013.58.176 RESEARCH ARTICLE Myxomycetes of Taiwan XXIV. The genus Physarum Chin-Hui Liu(1*), Jong-How Chang(1) and Fu-Ya Yeh(2) 1. Institute of Plant Science, National Taiwan University, Taipei, Taiwan 10617, R.O.C. 2. Department and Graduate School of Biotechnology, Fooyin University, Kaohsiung, Taiwan 83102, R.O.C. * Corresponding author. Email: [email protected] (Manuscript received 25 Febuary 2013; accepted 11 July 2013) ABSTRACT: Species of the genus Physarum collected from Taiwan were critically reviewed. In this paper, we also described and illustrated three new records of Taiwan: Physarum dictyosporum, P. nasuense, and P. tenerum, and a rediscovered species P. flavicomum. A key to the 51 Physarum species of Taiwan is also provided. KEY WORDS: Myxomycetes, Physaraceae, Physarum, Taiwan, taxonomy. INTRODUCTION 4’. Spores free, not in clusters ………………………………………. 5 5. Peridium double or triple …………………………………….…... 6 5’.Peridium single or appearing single ……………………………. 15 The genus Physarum, known as the largest genus in 6. Fructification strongly flattened, approximately isodiametric, Physaraceae and in Myxomycetes as well, comprises closely appressed and angular from pressure, and almost forming a pseudoaethalium; spores 12‒14 μm in diameter ...… P. tessellatum more than 141 species in the world records (Lado, 6’. Fructification not flattened, sporangiate or plasmodiocarpous, 2005–2013). As might be expected that members in this rarely forming a pseudoaethalium ……………………………….. 7 genus possess a wide range of characters as shown in 7. Fructification laterally compressed, usually dehiscing more or less the key to the species in this paper. They are, however, along a preformed longitudinal fissure ………………………..… 8 7’. -
Adaptive Behavior and Learning in Slime Moulds: the Role of Oscillations
Adaptive behavior and learning in slime moulds: the role of oscillations Aurèle Boussard, Adrian Fessel, Christina Oettmeier, Léa Briard, Hans-Gunther Dobereiner, Audrey Dussutour To cite this version: Aurèle Boussard, Adrian Fessel, Christina Oettmeier, Léa Briard, Hans-Gunther Dobereiner, et al.. Adaptive behavior and learning in slime moulds: the role of oscillations. Philosophical Transactions of the Royal Society of London. B (1887–1895), Royal Society, The, 2021. hal-02992905v1 HAL Id: hal-02992905 https://hal.archives-ouvertes.fr/hal-02992905v1 Submitted on 6 Nov 2020 (v1), last revised 25 Nov 2020 (v2) HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Submitted to Phil. Trans. R. Soc. B - Issue Adaptive behavior and learning in slime moulds: the role of oscillations Journal: Philosophical Transactions B Manuscript ID RSTB-2019-0757.R1 Article Type:ForReview Review Only Date Submitted by the n/a Author: Complete List of Authors: Boussard, Aurèle; CNRS, Research Center on Animal Cognition Fessel, Adrian; University of Bremen, Institut für Biophysik -
The Evolution of Ogres: Cannibalistic Growth in Giant Phagotrophs
bioRxiv preprint doi: https://doi.org/10.1101/262378; this version posted February 12, 2018. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Bloomfield, 2018-02-08 – preprint copy - bioRχiv The evolution of ogres: cannibalistic growth in giant phagotrophs Gareth Bloomfell MRC Laboratory of Molecular Biology, Cambrilge, UK [email protected] twitter.com/iliomorph Abstract Eukaryotes span a very large size range, with macroscopic species most often formel in multicellular lifecycle stages, but sometimes as very large single cells containing many nuclei. The Mycetozoa are a group of amoebae that form macroscopic fruiting structures. However the structures formel by the two major mycetozoan groups are not homologous to each other. Here, it is proposel that the large size of mycetozoans frst arose after selection for cannibalistic feeling by zygotes. In one group, Myxogastria, these zygotes became omnivorous plasmolia; in Dictyostelia the evolution of aggregative multicellularity enablel zygotes to attract anl consume surrounling conspecifc cells. The cannibalism occurring in these protists strongly resembles the transfer of nutrients into metazoan oocytes. If oogamy evolvel early in holozoans, it is possible that aggregative multicellularity centrel on oocytes coull have precelel anl given rise to the clonal multicellularity of crown metazoa. Keyworls: Mycetozoa; amoebae; sex; cannibalism; oogamy Introduction – the evolution of Mycetozoa independently in several diverse lineages, presumably reflecting strong selection for effective dispersal [9]. The dictyostelids (social amoebae or cellular slime moulds) and myxogastrids (also known as myxomycetes and true or The close relationship between dictyostelia and myxogastria acellular slime moulds) are protists that form macroscopic suggests that they shared a common ancestor that formed fruiting bodies (Fig. -
Annotated Checklist of the Myxomycetes (Slime Molds) Observed at the Gordon Natural Area West Chester University, PA) - Version I
West Chester University Digital Commons @ West Chester University Gordon Natural Area Biodiversity Studies Documents Gordon Natural Area Biodiversity Studies 7-24-2020 Annotated Checklist of the Myxomycetes (Slime Molds) Observed at the Gordon Natural Area West Chester University, PA) - Version I Nur Ritter Paige Vermeulen Maribeth Beatty Arianna Rivellini Alexandra Hodowanec Follow this and additional works at: https://digitalcommons.wcupa.edu/gna_bds_series Part of the Biodiversity Commons Annotated Checklist of the Myxomycetes (Slime Molds) Observed at the Gordon Natural Area West Chester University, PA) - Version I Description This checklist was compiled from Gordon Natural Area (GNA) Staff fieldwork during 2017-2020, augmented by photos from students and visitors to the GNA. The checklist contains 34 species in 18 Genera and 11 Families. Common Names Common names marked with an asterisk are those that were 'assigned' to a species by GNA staff. 'Monthly Presence' Data were taken from four sources: 1) fieldwork in the GNA; 2) the mycological literature; 3) field trip data from the New Jersey Mycological Association, New York Mycological Society, and the Western Pennsylvania Mushroom Club (see References); and, 4) observations in iNaturalist for Pennsylvania and six 'nearby' states: Connecticut, Delaware, Maryland, New Jersey, New York, and Ohio; (Data last updated: 7/7/2020). Associated Plants' GNA data are from field observations from 2017 to present. 'Literature' data were primarily taken from the USDA National Fungus Collection's Fungus-Host database (https://nt.ars-grin.gov/fungaldatabases/fungushost/fungushost.cfm), supplemented by a small number of observations from the literature. Species in red are non- native to Pennsylvania.