Four New Records for Physarales from Turkey
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Zygote Gene Expression and Plasmodial Development in Didymium Iridis
DePaul University Via Sapientiae College of Science and Health Theses and Dissertations College of Science and Health Summer 8-25-2019 Zygote gene expression and plasmodial development in Didymium iridis Sean Schaefer DePaul University, [email protected] Follow this and additional works at: https://via.library.depaul.edu/csh_etd Part of the Biology Commons Recommended Citation Schaefer, Sean, "Zygote gene expression and plasmodial development in Didymium iridis" (2019). College of Science and Health Theses and Dissertations. 322. https://via.library.depaul.edu/csh_etd/322 This Thesis is brought to you for free and open access by the College of Science and Health at Via Sapientiae. It has been accepted for inclusion in College of Science and Health Theses and Dissertations by an authorized administrator of Via Sapientiae. For more information, please contact [email protected]. Zygote gene expression and plasmodial development in Didymium iridis A Thesis presented in Partial fulfillment of the Requirements for the Degree of Master of Biology By Sean Schaefer 2019 Advisor: Dr. Margaret Silliker Department of Biological Sciences College of Liberal Arts and Sciences DePaul University Chicago, IL Abstract: Didymium iridis is a cosmopolitan species of plasmodial slime mold consisting of two distinct life stages. Haploid amoebae and diploid plasmodia feed on microscopic organisms such as bacteria and fungi through phagocytosis. Sexually compatible haploid amoebae act as gametes which when fused embark on an irreversible developmental change resulting in a diploid zygote. The zygote can undergo closed mitosis resulting in a multinucleated plasmodium. Little is known about changes in gene expression during this developmental transition. Our principal goal in this study was to provide a comprehensive list of genes likely to be involved in plasmodial development. -
Afşar (Taşkent K-Kd’ Su, Konya) Te Ktono-Stratigrafisi
ÇUKUROVA ÜNİVERSİTESİ FEN BİLİMLERİ ENSTİTÜSÜ YÜKSEK LİSANS TEZİ T urgut AKSU G ÜLPINAR - AFŞAR (TAŞKENT K-KD’ SU, KONYA) TE KTONO-STRATİGRAFİSİ JEOLOJİ MÜHENDİSLİĞİ ANABİLİM DALI ADANA, 2009 ÖZ YÜKSEK LİSANS TEZİ GÜLPINAR – AFŞAR (TAŞKENT K-KD’ SU–KONYA) TEKTONO-STRATİGRAFİSİ Turgut AKSU ÇUKUROVA ÜNİVERSİTESİ FEN BİLİMLERİ ENSTİTÜSÜ JEOLOJİ MÜHENDİSLİĞİ ANABİLİM DALI Danışman : Prof. Dr. Cavit DEMİRKOL Yıl : 2009, Sayfa :75 Juri : Prof. Dr. Cavit DEMİRKOL Prof. Dr. Ulvi Can ÜNLÜGENÇ Doç. Dr. Erol ÖZER İnceleme alanı Orta Toroslar’ın bir kısım jeolojik özelliklerini sunmaktadır. Geyik Dağı, Aladağ, Bolkar Dağı ve Bozkır birlikleri; stratigrafik, yapısal ve metamorfizma özellikleri açısından farklı ortam koşullarını yansıtan birlikler yer almaktadır. Bu birlikler birbirleriyle tektonik dokanak ilişkisi içersindedirler. İnceleme alanınında allokton konumlu olan Aladağ ve Bolkar Dağı birlikleri, Geç Devoniyen-Geç Kretase aralığında çökelmiştir. Başlıca şelf tipi karbonat ve kırıntılı kaya birimleriyle Senoniyen yaşlı olistolit ve olistostromal yapılışlı denizel kırıntılılardan oluşmaktadır. Bu birimler inceleme alanının kuzeyinde Toroslar’ın tabanında yer alan göreceli otokton Geyik dağı birliğine ait olan Lütesiyen yaşlı denizel kırıntılıların üzerinde yatay naplar halinde yer almaktadırlar. Birbirleriyle sedimantolojik açıdan benzerlik gösteren bu tektonik birlikler; stratigrafi, metamorfizma ve yapısal özellikleri açısından farklılıklar göstermektedir. Bozkır Birliği, Triyas-Kretase zaman aralığındaki kayaçları kapsamaktadır. Bu birlik -
Slime Moulds
Queen’s University Biological Station Species List: Slime Molds The current list has been compiled by Richard Aaron, a naturalist and educator from Toronto, who has been running the Fabulous Fall Fungi workshop at QUBS between 2009 and 2019. Dr. Ivy Schoepf, QUBS Research Coordinator, edited the list in 2020 to include full taxonomy and information regarding species’ status using resources from The Natural Heritage Information Centre (April 2018) and The IUCN Red List of Threatened Species (February 2018); iNaturalist and GBIF. Contact Ivy to report any errors, omissions and/or new sightings. Based on the aforementioned criteria we can expect to find a total of 33 species of slime molds (kingdom: Protozoa, phylum: Mycetozoa) present at QUBS. Species are Figure 1. One of the most commonly encountered reported using their full taxonomy; common slime mold at QUBS is the Dog Vomit Slime Mold (Fuligo septica). Slime molds are unique in the way name and status, based on whether the species is that they do not have cell walls. Unlike fungi, they of global or provincial concern (see Table 1 for also phagocytose their food before they digest it. details). All species are considered QUBS Photo courtesy of Mark Conboy. residents unless otherwise stated. Table 1. Status classification reported for the amphibians of QUBS. Global status based on IUCN Red List of Threatened Species rankings. Provincial status based on Ontario Natural Heritage Information Centre SRank. Global Status Provincial Status Extinct (EX) Presumed Extirpated (SX) Extinct in the -
Biodiversity of Plasmodial Slime Moulds (Myxogastria): Measurement and Interpretation
Protistology 1 (4), 161–178 (2000) Protistology August, 2000 Biodiversity of plasmodial slime moulds (Myxogastria): measurement and interpretation Yuri K. Novozhilova, Martin Schnittlerb, InnaV. Zemlianskaiac and Konstantin A. Fefelovd a V.L.Komarov Botanical Institute of the Russian Academy of Sciences, St. Petersburg, Russia, b Fairmont State College, Fairmont, West Virginia, U.S.A., c Volgograd Medical Academy, Department of Pharmacology and Botany, Volgograd, Russia, d Ural State University, Department of Botany, Yekaterinburg, Russia Summary For myxomycetes the understanding of their diversity and of their ecological function remains underdeveloped. Various problems in recording myxomycetes and analysis of their diversity are discussed by the examples taken from tundra, boreal, and arid areas of Russia and Kazakhstan. Recent advances in inventory of some regions of these areas are summarised. A rapid technique of moist chamber cultures can be used to obtain quantitative estimates of myxomycete species diversity and species abundance. Substrate sampling and species isolation by the moist chamber technique are indispensable for myxomycete inventory, measurement of species richness, and species abundance. General principles for the analysis of myxomycete diversity are discussed. Key words: slime moulds, Mycetozoa, Myxomycetes, biodiversity, ecology, distribu- tion, habitats Introduction decay (Madelin, 1984). The life cycle of myxomycetes includes two trophic stages: uninucleate myxoflagellates General patterns of community structure of terrestrial or amoebae, and a multi-nucleate plasmodium (Fig. 1). macro-organisms (plants, animals, and macrofungi) are The entire plasmodium turns almost all into fruit bodies, well known. Some mathematics methods are used for their called sporocarps (sporangia, aethalia, pseudoaethalia, or studying, from which the most popular are the quantita- plasmodiocarps). -
Slime Molds: Biology and Diversity
Glime, J. M. 2019. Slime Molds: Biology and Diversity. Chapt. 3-1. In: Glime, J. M. Bryophyte Ecology. Volume 2. Bryological 3-1-1 Interaction. Ebook sponsored by Michigan Technological University and the International Association of Bryologists. Last updated 18 July 2020 and available at <https://digitalcommons.mtu.edu/bryophyte-ecology/>. CHAPTER 3-1 SLIME MOLDS: BIOLOGY AND DIVERSITY TABLE OF CONTENTS What are Slime Molds? ....................................................................................................................................... 3-1-2 Identification Difficulties ...................................................................................................................................... 3-1- Reproduction and Colonization ........................................................................................................................... 3-1-5 General Life Cycle ....................................................................................................................................... 3-1-6 Seasonal Changes ......................................................................................................................................... 3-1-7 Environmental Stimuli ............................................................................................................................... 3-1-13 Light .................................................................................................................................................... 3-1-13 pH and Volatile Substances -
Çekiç Dağı Ve Gevne Vadisi Florası ( Hadim-Konya)*
S.Ü. Fen-Edebiyat Fakültesi Fen Dergisi Sayı 20 (2002) 99-139, KONYA Çekiç Dağı ve Gevne Vadisi Florası ( Hadim-Konya)* Kuddisi ERTUĞRUL1, Hüseyin DURAL 2, Mustafa KARGIOĞLU2 Özet: Bu araştırma, l995-1997 yılları arasında Gevne Vadisi ile Çekiç Dağı ve çevresinin florasını tespit etmek amacıyla yapılmıştır. Konya il sınırları içerisinde yer alan araştırma alanının güney ucu Konya-Antalya il sınırını oluşturur. Araştırma alanı Davis’in kareleme sistemine göre C4 karesinde yer almaktadır. Araştırma sonucunda bölgeden 68 familya ve 282 cinse ait 607 tür ve tür altı takson tespit edilmiştir. Taksonların 133’ü endemik (% 21.9) tir. Floristik elemanların fitocoğrafik bölgelere göre dağılımları şöyledir: Iran-Turan 132 (% 21.7), Akdeniz 109 (% 17.9), Avrupa-Sibirya 30 (% 4.9), geniş yayılışlı ve yayılış alanları bilinmeyenler 336 (% 54.4) şeklindedir. Anahtar Kelimeler: Flora, Gevne Vadisi, Çekiç dağı, Hadim, Konya, Türkiye The Flora of Çekiç Mountain and Gevne Valley (Hadim-Konya) Abstract: The flora of Çekiç Mountain and Gevne Valley were carried out bwetween 1995 and 1997. The study area is located in southern part of Konya province and it is border between Konya and Antalya provinces. According the Grid systems it falls within C4 square. Sixty eight families, 282 genera and 607 taxa were identified in study area. The number of endemic taxa is 133 (21.9 %). The phytogeographic elements are represented as follows: Irano-Turanian 132 (21.7 %), Mediterranean 109 (17.9%), and Euro-Siberian 30 (4.9 %). The phytogeographic regions of 336 (54.4 %) taxa are undetermined and multi-regional. Key Words: Flora, Gevne valley, Çekiç mountain, Hadim, Konya, Turkey GİRİŞ Araştırma alanı Konya il sınırları içerisindedir. -
Myxomyceten (Schleimpilze) Und Mycetozoa (Pilztiere) - Lebensform Zwischen Pflanze Und Tier 7-37 © Biologiezentrum Linz/Austria; Download Unter
ZOBODAT - www.zobodat.at Zoologisch-Botanische Datenbank/Zoological-Botanical Database Digitale Literatur/Digital Literature Zeitschrift/Journal: Stapfia Jahr/Year: 2000 Band/Volume: 0073 Autor(en)/Author(s): Nowotny Wolfgang Artikel/Article: Myxomyceten (Schleimpilze) und Mycetozoa (Pilztiere) - Lebensform zwischen Pflanze und Tier 7-37 © Biologiezentrum Linz/Austria; download unter www.biologiezentrum.at Myxomyceten (Schleimpilze) und Mycetozoa (Pilztiere) - Lebensformen zwischen Pflanze und Tier W. NOWOTNY Abstract Myxomycetes (slime molds) and Myce- structures is described in detail. In the tozoa (fungal animals) - Intermediate chapters "Distribution and Phenology" as forms between plant and animal. well as "Habitats and Substrata" mainly Myxomycetes and Mycetozoa are extra- own experiences from Upper Austria are ordinary, but not widely known largely taken into account. Relations to other or- microscopic organisms. Some terminologi- ganisms including humans could only be cal considerations are followed by a short exemplified. A glossary and a classification history of research. The complex life cycle of subclasses, orders, families and genera including spores, myxoflagellates, plasmo- of myxomycetes should fasciliate a basic dia and fructifications with their particular overview. Inhalt 1. Einleitung 8 2. Entwicklungszyklus der Myxomyceten 9 2.1. Sporen 11 2.2. Myxoflagellaten und Mikrozysten 13 2.3. Plasmodium und Sklerotium 14 2.4- Bildung der Fruktifikationen 16 2.4.1. Sporocarpien, Plasmodiocarpien, Aethalien und Pseudoaethalien 17 2.4.2. Strukturen der Fruktifikationen 19 3. Verbreitung und Phänologie 25 4- Lebensraum und Substrate 28 4-1. Myxomyceten auf Borke lebender Bäume in feuchter Kammer 29 42. Nivicole Myxomyceten 30 5. Beziehung zu anderen Lebewesen 31 6. Nomenklatur 32 7. Glossar 33 Stapfia 73, 8. -
Physarum Polycephalum (Plasmodial Slime Mold)
Physarum polycephalum (plasmodial slime mold) Species: polycephalum Genus: Physarum Family: Physaraceae Order: Physarales Class: Myxomycetes Phylum: Mycetozoa Kingdom: Amoebozoa Conditions for Customer Ownership We hold permits allowing us to transport these organisms. To access permit conditions, click here. Never purchase living specimens without having a disposition strategy in place. There are currently no USDA permits required for this organism. In order to protect our environment, never release a live laboratory organism into the wild. Primary Hazard Considerations Always wash your hands thoroughly before and after you handle your cultures, or anything it has touched. It is recommended to use gloves when working with mold, fungus, or bacteria. Availability Physarum is available year round. Care Habitat • Plasmodial stage are shipped in a Petri dish on Physarum agar with oats. Your Physarum should be bright yellow in color, and fan shaped. If your Physarum takes on a different appearance it may be contaminated. Contaminated cultures occur when a foreign specimen (something other than Physarum) makes its way onto your culture. This culture should be stored at room temperature in a dark place. The culture should be viable for about 1–2 weeks in its current container. • Sclerotia are hardened masses of irregular form consisting of many minute cell-like components. These are shipped on cut strips of filter paper in a tube. The culture should be stored at room temperature and can be stored in this stage for several months. Care: • Physarum is subcultured onto Physarum agar, and is incubated at room temperature or 25 °C. To maintain viability, plasmodial Physarum should be subcultured weekly. -
BULLETIN of the MINERAL RESEARCH and EXPLORATION Bulletin of the Foreign Edition 2014 148 ISSN : 1304 - 334X
Bulletin of MTA (2014) 148: 1-17 BULLETIN OF THE MINERAL RESEARCH AND EXPLORATION Bulletin of the Foreign Edition 2014 148 ISSN : 1304 - 334X CONTENTS Possible Incision Time of The Large Valleys In Southern Marmara Region, NW Turkey ...........................................................Nizamettin KAZANCI, Ömer EMRE, Korhan ERTURAÇ, Suzan A.G. LEROY, ...........................................................................................................Salim ÖNCEL, Özden ‹LER‹ and Özlem TOPRAK 1 Tectono - Sedimentary Evolution of Bucakk›flla Region (SW Karaman) In Central Taurides .................................................................................................................................................................Tolga ES‹RTGEN 19 Neogene Stratigraphy of The Northern Part of Karaburun Peninsula Mineral Research and Exploration ....................................................................................................................................................................Fikret GÖKTAfi 43 The Importance of Benthic Foraminiferas In Detecting Features of Ecological and Geological Structures In Edremit Bay And On Coastal Areas of Dikili Channel (NE Aegean Sea) .....................Engin MER‹Ç, Niyazi AVfiAR, ‹pek F. BARUT, Mustafa ERYILMAZ, Fulya YÜCESOY ERYILMAZ, ..................................................................................................................................M. Baki YOKEfi and Feyza D‹NÇER 63 Geochemical Characteristics of Laterites: The Ailibaltalu Deposit, -
Annotated Checklist of the Myxomycetes (Slime Molds) Observed at the Gordon Natural Area West Chester University, PA) - Version I
West Chester University Digital Commons @ West Chester University Gordon Natural Area Biodiversity Studies Documents Gordon Natural Area Biodiversity Studies 7-24-2020 Annotated Checklist of the Myxomycetes (Slime Molds) Observed at the Gordon Natural Area West Chester University, PA) - Version I Nur Ritter Paige Vermeulen Maribeth Beatty Arianna Rivellini Alexandra Hodowanec Follow this and additional works at: https://digitalcommons.wcupa.edu/gna_bds_series Part of the Biodiversity Commons Annotated Checklist of the Myxomycetes (Slime Molds) Observed at the Gordon Natural Area West Chester University, PA) - Version I Description This checklist was compiled from Gordon Natural Area (GNA) Staff fieldwork during 2017-2020, augmented by photos from students and visitors to the GNA. The checklist contains 34 species in 18 Genera and 11 Families. Common Names Common names marked with an asterisk are those that were 'assigned' to a species by GNA staff. 'Monthly Presence' Data were taken from four sources: 1) fieldwork in the GNA; 2) the mycological literature; 3) field trip data from the New Jersey Mycological Association, New York Mycological Society, and the Western Pennsylvania Mushroom Club (see References); and, 4) observations in iNaturalist for Pennsylvania and six 'nearby' states: Connecticut, Delaware, Maryland, New Jersey, New York, and Ohio; (Data last updated: 7/7/2020). Associated Plants' GNA data are from field observations from 2017 to present. 'Literature' data were primarily taken from the USDA National Fungus Collection's Fungus-Host database (https://nt.ars-grin.gov/fungaldatabases/fungushost/fungushost.cfm), supplemented by a small number of observations from the literature. Species in red are non- native to Pennsylvania. -
A Phylogeny of Cribrariaceae Among Myxomycetes Derived from Morphological Characters
MYCOTAXON Volume 110, pp. 331–355 October–December 2009 A phylogeny of Cribrariaceae among Myxomycetes derived from morphological characters José Martín Ramírez-Ortega1, Efraín De Luna2 & Arturo Estrada-Torres3 [email protected] 1Instituto de Ecología A.C. Posgrado, Km. 2.5 carr. Antigua a Coatepec 351 Congregación el Haya, Xalapa, Veracruz, 91070, México 2Departamento de Biodiversidad y Sistemática, Instituto de Ecología A.C. Xalapa, Veracruz, 91070, México 3Centro de Investigación en Ciencias Biológicas, Universidad Autónoma de Tlaxcala Ixtacuixtla, Tlaxcala, 90122, México Abstract – A cladistic study of the Cribrariaceae was performed to examine its phylogenetic position among the Myxomycetes based on a data matrix comprising 54 morphological characters and 55 exemplar myxomycete species. Parsimony ratchet with implied weighting was employed as tree search strategy. Results show the Cribrariaceae as a monophyletic group that includes Cribraria and Dictydium but not Lindbladia and suggest Trichiales as the sister group. Our analyses neither support Dictydium as a genus separated from Cribraria nor the Liceales as monophyletic. This is the first attempt to evaluate the phylogenetic relationships of this group using morphological characters from representative species of all Myxomycetes within a cladistic framework. Keywords – Echinosteliales, Physarales, slime molds, Stemonitales, taxonomy Introduction According to Alexopoulos (1973), Zopf (in Die Pilzthiere oder Schleimpilze, 1885) included Cribrariaceae within the Endosporeae in the division Eumycetozoa based on the presence of swarm cells, true plasmodia, and the formation of spores in sporocysts. Massee (1892), who based his classification on the capillitium as the primary taxonomic criterion, divided the Myxogastres into four orders, placing Cribrariaceae in order Peritricheae suborder Cribrariae together with the suborder Tubulinae. -
Deltocephalinae (Hemiptera, Cicadellidae) Species in Southwestern Turkey with New Records* Emine Demir
Entomologica romanica 20: 49-55, 2016 ISSN 1224-2594 / article no.: ER20201601 Deltocephalinae (Hemiptera, Cicadellidae) species in Southwestern Turkey with new records* Emine Demir Summary: In this study, Deltocephalinae (Cicadellidae) species collected from Gevne Valley and surrounding located in south western Turkey are evaluated faunistically, ecologically and zoo geographically. 57 species belonging to 36 genera from 10 tribes in the area have been identified. Determined species contain new records for Mediterranean and Central Anatolia Regions and Platymetopius (s. str.) pseudoguttatus (Abdul-Nour, 1987) species are new record for Turkey. It is determined that the species identified in the study area are belonging to 21 different zoogeographical elements of endemism and the endemism ratio of area is 8.77 %. Also it is determined that Athysanini is the most dominant tribe in the area in terms of individual density with the ratio 46.84%. And 56.14% of species, wich have been determined, were collected from light trap, respectively. Key words: Deltocephalinae (Cicadellidae), faunistic assessment, zoogeographical assessment, ecological assessment, new records, south western Turkey. Introduction maquis dominated by 1000m, although the area has been destroyed by humans in many places. Sometimes Faunistic records belonging to this suborder P. brutia occurs at over 1000m. These plant formations from Turkey have been given by Demir (2008). In are included in the Quercetalia ilicis order in the the following years, Demir and Demirsoy (2008, Quercetea ilicis class. Forests in 1500m above zone 2016); Güçlü (2010); Önder et al. (2011); Koçak consist of Cedrus libani, Abies cilicica, Pinus nigra and Kemal (2012); Tezcan et al. (2003, 2010, ssp.