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1 CARBOHYDRATES Introduction Carbohydrates Are a Group Of
CARBOHYDRATES Introduction Carbohydrates are a group of compounds which constitute the basic components of animal and plant tissues. The basic chemical unit represented by CnH2nOn, is used by living cells to make complex primary and secondary metabolites in tissues. Carbohydrates serve as: i. Sources of energy, e.g. sugars ii. Stores of energy, e.g. starch and glycogen iii. Constituents of shells e.g. chitin iv. Plant supportive tissue, e.g. cellulose The hierarchical complexity can be summarized as follows: Monosaccharides Disaccharides Trisaccharides, etc. Oligosaccharides Polysaccharides The word “saccharide” was derived from the Greek word sacharr which means sugar. 1 Create PDF files without this message by purchasing novaPDF printer (http://www.novapdf.com) Chemical Classification of Carbohydrates Monosaccharides The monosaccharides are known as the simple sugars. The smallest simple sugar is D-Glyceraldehyde: 2 Create PDF files without this message by purchasing novaPDF printer (http://www.novapdf.com) This is a 3 carbon hydroxyladehyde and is called an aldose or a triose. The isomer with a ketone group on the second carbon is termed a ketose. Thus the simple monosaccharides for a congeneric series of aldoses or ketoses with increasing molecular weight. Triose has 3 carbon atoms Tetrose has 4 carbon atoms Pentose has 5 carbon atoms Hexose has six carbon atoms Heptose has 7 carbon atoms Octose has 8 carbon atoms Nonose has 9 carbon atoms Decose has 10 carbon atoms Etc. Thus an aldose is an aldehyde with a terminal –CHO -
WO 2013/070444 Al 16 May 2013 (16.05.2013) W P O P C T
(12) INTERNATIONAL APPLICATION PUBLISHED UNDER THE PATENT COOPERATION TREATY (PCT) (19) World Intellectual Property Organization International Bureau (10) International Publication Number (43) International Publication Date WO 2013/070444 Al 16 May 2013 (16.05.2013) W P O P C T (51) International Patent Classification: (81) Designated States (unless otherwise indicated, for every A23G 4/00 (2006.01) kind of national protection available): AE, AG, AL, AM, AO, AT, AU, AZ, BA, BB, BG, BH, BN, BR, BW, BY, (21) International Application Number: BZ, CA, CH, CL, CN, CO, CR, CU, CZ, DE, DK, DM, PCT/US20 12/062043 DO, DZ, EC, EE, EG, ES, FI, GB, GD, GE, GH, GM, GT, (22) International Filing Date: HN, HR, HU, ID, IL, IN, IS, JP, KE, KG, KM, KN, KP, 26 October 2012 (26.10.2012) KR, KZ, LA, LC, LK, LR, LS, LT, LU, LY, MA, MD, ME, MG, MK, MN, MW, MX, MY, MZ, NA, NG, NI, (25) Filing Language: English NO, NZ, OM, PA, PE, PG, PH, PL, PT, QA, RO, RS, RU, (26) Publication Language: English RW, SC, SD, SE, SG, SK, SL, SM, ST, SV, SY, TH, TJ, TM, TN, TR, TT, TZ, UA, UG, US, UZ, VC, VN, ZA, (30) Priority Data: ZM, ZW. 61/556,546 7 November 20 11 (07. 11.201 1) US (84) Designated States (unless otherwise indicated, for every (71) Applicant (for all designated States except US): WVI. kind of regional protection available): ARIPO (BW, GH, WRIGLEY JR. COMPANY [US/US]; 1132 Blackhawk GM, KE, LR, LS, MW, MZ, NA, RW, SD, SL, SZ, TZ, Street, Chicago, IL 60642 (US). -
Food Carbohydrates: Monosaccharides and Oligosaccharides
Paper No. 01 Paper Title: Food Chemistry Module-04: Food carbohydrates: Monosaccharides and Oligosaccharides Monosaccharides The simplest form of carbohydrates is the monosaccharide. Monosaccharides are either aldoses or ketoses. Aldoses such as glucose consists of a carbon backbone and a carbonyl group (C=O) located at the end of the chain. Ketoses such as fructose consists of a carbon backbone with a carbonyl group located at any other carbon in the chain. The remaining carbon atoms are bound to hydroxyl groups (-OH). Monosaccharide classifications based on the number of carbons Number Category of Examples Name Carbons 4 Tetrose Erythrose, Threose 5 Pentose Arabinose, Ribose, Ribulose, Xylose, Xylulose, Lyxose Allose, Altrose, Fructose, Galactose, Glucose, Gulose, Idose, 6 Hexose Mannose, Sorbose, Talose, Tagatose 7 Heptose Sedoheptulose, Mannoheptulose Monosaccharides Three common sugars glucose, galactose and fructose share the same molecular formula: C6H12O6. Because of their six carbon atoms, each is a hexose. Although all three share the same molecular formula, the arrangement of atoms differs in each case. Substances such as these three, which have identical molecular formulas but different structural formulas, are known as structural isomers. Glucose "Blood sugar" is the immediate source of energy for cellular respiration. Glucose, which is also referred to as dextrose, is a moderately sweet sugar found in vegetables and fruit. When glucose is fermented by the enzyme zymase, in yeast, it results in the formation of carbon dioxide and ethyl alcohol. It is the basic structure to which all carbohydrates are reduced to in the end, for transport via the bloodstream and use by the cells of the body. -
Ii- Carbohydrates of Biological Importance
Carbohydrates of Biological Importance 9 II- CARBOHYDRATES OF BIOLOGICAL IMPORTANCE ILOs: By the end of the course, the student should be able to: 1. Define carbohydrates and list their classification. 2. Recognize the structure and functions of monosaccharides. 3. Identify the various chemical and physical properties that distinguish monosaccharides. 4. List the important monosaccharides and their derivatives and point out their importance. 5. List the important disaccharides, recognize their structure and mention their importance. 6. Define glycosides and mention biologically important examples. 7. State examples of homopolysaccharides and describe their structure and functions. 8. Classify glycosaminoglycans, mention their constituents and their biological importance. 9. Define proteoglycans and point out their functions. 10. Differentiate between glycoproteins and proteoglycans. CONTENTS: I. Chemical Nature of Carbohydrates II. Biomedical importance of Carbohydrates III. Monosaccharides - Classification - Forms of Isomerism of monosaccharides. - Importance of monosaccharides. - Monosaccharides derivatives. IV. Disaccharides - Reducing disaccharides. - Non- Reducing disaccharides V. Oligosaccarides. VI. Polysaccarides - Homopolysaccharides - Heteropolysaccharides - Carbohydrates of Biological Importance 10 CARBOHYDRATES OF BIOLOGICAL IMPORTANCE Chemical Nature of Carbohydrates Carbohydrates are polyhydroxyalcohols with an aldehyde or keto group. They are represented with general formulae Cn(H2O)n and hence called hydrates of carbons. -
Structure Elucidations of Bacterial Polysaccharides Using Nmr Spectroscopy and Bioinformatics
! "#! #"$"" %& '( ) ' *#+,$ - $. / $0 1 / $ / $ 2%3 ' / $ . / $ . 2%3 ' - $ . / 4,' $ 5 / / 4,$. 43' / $ / $ . / 1 / $. 6 $. 2%3 / $5 ' / +7' 87$ 5 1 '/ , / $. / ' / 1 $ ! " ! " "#! 9:: $$ : ; < 99 9 9 #=+>+! 5,28!>8#!+=88? > 5,28!>8#!+=88?7? # $ % '#"+8# STRUCTURE ELUCIDATIONS OF BACTERIAL POLYSACCHARIDES USING NMR SPECTROSCOPY AND BIOINFORMATICS Jonas Ståhle Structure Elucidations of Bacterial Polysaccharides using NMR Spectroscopy and Bioinformatics Jonas Ståhle ©Jonas Ståhle, Stockholm University 2017 ISBN print 978-91-7649-952-8 ISBN PDF 978-91-7649-953-5 Cover Picture: kolhydratskurbits Printed by Universitetsservice US-AB, Stockholm 2017 Distributor: Department of Organic Chemistry ӏ್峯峫岾峇 ෫್峯峫岾峇 ઉ峘峯Ո峛ॷ峂್峯峫岾峙 峗岸島屺峿峯峎 ཋ峜峗岼 ݀峄峓ᛊ岣峇 岱峑峯峄峇岸್峼島峐峓峽峸 ݣ࣑ୖٸ Abstract Carbohydrates are ubiquitous components in nature involved in a range of tasks. They cover every cell and contribute both structural stability as well as identity. Lipopolysaccharides are the outermost exposed -
Structures and Characteristics of Carbohydrates in Diets Fed to Pigs: a Review Diego M
Navarro et al. Journal of Animal Science and Biotechnology (2019) 10:39 https://doi.org/10.1186/s40104-019-0345-6 REVIEW Open Access Structures and characteristics of carbohydrates in diets fed to pigs: a review Diego M. D. L. Navarro1, Jerubella J. Abelilla1 and Hans H. Stein1,2* Abstract The current paper reviews the content and variation of fiber fractions in feed ingredients commonly used in swine diets. Carbohydrates serve as the main source of energy in diets fed to pigs. Carbohydrates may be classified according to their degree of polymerization: monosaccharides, disaccharides, oligosaccharides, and polysaccharides. Digestible carbohydrates include sugars, digestible starch, and glycogen that may be digested by enzymes secreted in the gastrointestinal tract of the pig. Non-digestible carbohydrates, also known as fiber, may be fermented by microbial populations along the gastrointestinal tract to synthesize short-chain fatty acids that may be absorbed and metabolized by the pig. These non-digestible carbohydrates include two disaccharides, oligosaccharides, resistant starch, and non-starch polysaccharides. The concentration and structure of non-digestible carbohydrates in diets fed to pigs depend on the type of feed ingredients that are included in the mixed diet. Cellulose, arabinoxylans, and mixed linked β-(1,3) (1,4)-D-glucans are the main cell wall polysaccharides in cereal grains, but vary in proportion and structure depending on the grain and tissue within the grain. Cell walls of oilseeds, oilseed meals, and pulse crops contain cellulose, pectic polysaccharides, lignin, and xyloglucans. Pulse crops and legumes also contain significant quantities of galacto-oligosaccharides including raffinose, stachyose, and verbascose. -
25 05.Html.Ppt [Read-Only]
25.5 A Mnemonic for Carbohydrate Configurations The Eight D-Aldohexoses CH O H OH CH2OH The Eight D-Aldohexoses All CH O Altruists Gladly Make Gum In H OH Gallon CH2OH Tanks The Eight D-Aldohexoses All Allose CH O Altruists Altrose Gladly Glucose Make Mannose Gum Gulose In Idose H OH Gallon Galactose CH2OH Tanks Talose The Eight D-Aldohexoses Allose CH O Altrose Glucose Mannose Gulose Idose H OH Galactose CH2OH Talose The Eight D-Aldohexoses Allose CH O Altrose Glucose Mannose Gulose H OH Idose H OH Galactose CH2OH Talose The Eight D-Aldohexoses Allose CH O Altrose Glucose Mannose Gulose HO H Idose H OH Galactose CH2OH Talose The Eight D-Aldohexoses Allose CH O Altrose Glucose Mannose Gulose H OH Idose H OH Galactose CH2OH Talose The Eight D-Aldohexoses Allose CH O Altrose Glucose Mannose H OH Gulose H OH Idose H OH Galactose CH2OH Talose The Eight D-Aldohexoses Allose CH O Altrose Glucose Mannose HO H Gulose H OH Idose H OH Galactose CH2OH Talose The Eight D-Aldohexoses Allose CH O Altrose Glucose Mannose Gulose HO H Idose H OH Galactose CH2OH Talose The Eight D-Aldohexoses Allose CH O Altrose Glucose Mannose H OH Gulose HO H Idose H OH Galactose CH2OH Talose The Eight D-Aldohexoses Allose CH O Altrose Glucose Mannose HO H Gulose HO H Idose H OH Galactose CH2OH Talose The Eight D-Aldohexoses Allose CH O Altrose Glucose Mannose H OH Gulose H OH Idose H OH Galactose CH2OH Talose The Eight D-Aldohexoses Allose CH O Altrose Glucose H OH Mannose H OH Gulose H OH Idose H OH Galactose CH2OH Talose The Eight D-Aldohexoses Allose CH O Altrose -
Extending Enzyme Molecular Recognition with an Expanded Amino Acid Alphabet
Extending enzyme molecular recognition with an expanded amino acid alphabet Claire L. Windlea,b, Katie J. Simmonsa,c, James R. Aulta,b, Chi H. Trinha,b, Adam Nelsona,c,1, Arwen R. Pearsona,2,3, and Alan Berrya,b,1 aAstbury Centre for Structural Molecular Biology, University of Leeds, Leeds LS2 9JT, United Kingdom; bSchool of Molecular and Cellular Biology, University of Leeds, Leeds LS2 9JT, United Kingdom; and cSchool of Chemistry, University of Leeds, Leeds LS2 9JT, United Kingdom Edited by Perry Allen Frey, University of Wisconsin–Madison, Madison, WI, and approved January 20, 2017 (received for review October 26, 2016) Natural enzymes are constructed from the 20 proteogenic amino for catalysis and arise through posttranslational modifications of acids, which may then require posttranslational modification or the the polypeptide chain (21, 22), allowing access to chemistries not recruitment of coenzymes or metal ions to achieve catalytic function. otherwise provided by the 20 proteogenic amino acids. Here, we demonstrate that expansion of the alphabet of amino acids Technologies for the protein engineer to incorporate Ncas into can also enable the properties of enzymes to be extended. A proteins at specifically chosen sites, either by genetic means (23–25) chemical mutagenesis strategy allowed a wide range of noncanon- or by chemical modification (26, 27), have recently been developed. ical amino acids to be systematically incorporated throughout an These approaches are powerful because, unlike traditional protein active site to alter enzymic substrate specificity. Specifically, 13 engineering with the 20 canonical amino acids, protein engineering different noncanonical side chains were incorporated at 12 different with Ncas has almost unlimited novel side-chain structures and positions within the active site of N-acetylneuraminic acid lyase chemistries from which to choose. -
20H-Carbohydrates.Pdf
Carbohydrates Carbohydrates are compounds that have the general formula CnH2nOn Because CnH2nOn can also be written Cn(H2O)n, they appear to be “hydrates of carbon” Carbohydrates are also called “sugars” or “saccharides” Carbohydrates can be either aldoses (ald is for aldehyde and ose means a carbohydrate) or ketoses (ket is for ketone) OH OH O OH CH2OH CH2OH OHC HOH2C OH OH OH OH An Aldose A Ketose (D-Glucose) (D-Fructose) Carbohydrates Due to the multiple chiral centers along a linear carbon chain for carbohydrates, Emil Fischer developed the “Fischer Projection” in order to represent these compounds Remember how to draw a Fischer projection: 1) View the linear carbon chain along the vertical axis (always place the more oxidized carbon [aldehyde in an aldose] towards the top) 2) The horizontal lines are coming out of the page toward the viewer 3) Will need to change the viewpoint for each carbon so the horizontal substituents are always pointing towards the viewer CHO OH OH H OH HO H CH2OH = OHC H OH OH OH H OH CH2OH Emil Fischer (1852-1919) Carbohydrates The aldoses are thus all related by having an aldehyde group at one end, a primary alcohol group at the other end, and the two ends connected by a series of H-C-OH groups CHO CHO CHO CHO CHO H OH H OH H OH H OH HO H CH2OH H OH H OH H OH HO H CH2OH H OH H OH HO H CH2OH H OH HO H CH2OH CH2OH Aldotriose Aldotetrose Aldopentose Aldohexose Aldohexose D-glyceraldehyde D-erythose D-ribose D-allose L-allose The D-aldoses are named according to glyceraldehyde, the D refers to the configurational -
Reaction of Glucose Catalyzed by Framework and Extraframework Tin Sites in Zeolite Beta
Reaction of Glucose Catalyzed by Framework and Extraframework Tin Sites in Zeolite Beta Thesis by Ricardo Bermejo-Deval In Partial Fulfillment of the Requirements for the degree of Doctor of Philosophy CALIFORNIA INSTITUTE OF TECHNOLOGY Pasadena, California 2014 (Defended 12 May 2014) ii 2014 Ricardo Bermejo-Deval All Rights Reserved iii ACKNOWLEDGEMENTS The past years at Caltech have been one of the most challenging periods of my life, learning to be a better person and being part of the world of science. I feel privileged to have interacted with such talented and inspiring colleagues and scientists, as well as those I have disagreed with. The variety of people I have encountered and the experiences I have gathered have helped me to gain scholarship, wisdom, confidence and critical thinking, as much as to become an open-minded person to any opinion or people. First and foremost, I am very grateful to my advisor and mentor, Professor Mark E. Davis, for his financial, scientific and personal support. I appreciate his patience, flexibility, advice and scientific discussions, helping me to grow and mature scientifically. I would like to thank the thesis committee Professors Richard Flagan, Jay Labinger and Theodor Agapie, for their discussions and kindness. I appreciate everyone in the Davis group for helping me in the lab throughout these years. Special thanks to Yasho for helping me get started in the lab, to Bingjun and Raj for scientific advice, and to Marat for helpful talks. I am also very thankful to Sonjong Hwang for SS NMR, David Vandervelde for NMR and Mona Shahgholi for mass spectrometry. -
Conformational Study of the Open-Chain and Furanose Structures of D-Erythrose and D-Threose ⇑ Luis Miguel Azofra A, Ibon Alkorta A, , José Elguero A, Paul L
Carbohydrate Research 358 (2012) 96–105 Contents lists available at SciVerse ScienceDirect Carbohydrate Research journal homepage: www.elsevier.com/locate/carres Conformational study of the open-chain and furanose structures of D-erythrose and D-threose ⇑ Luis Miguel Azofra a, Ibon Alkorta a, , José Elguero a, Paul L. A. Popelier b,c a Instituto de Química Médica, CSIC, Juan de la Cierva, 3, E-28006 Madrid, Spain b Manchester Interdisciplinary Biocentre (MIB), 131 Princess Street, Manchester M1 7DN, United Kingdom c School of Chemistry, University of Manchester, Oxford Road, Manchester M13 9PL, United Kingdom article info abstract Article history: The potential energy surfaces for the different configurations of the D-erythrose and D-threose (open- Received 3 May 2012 chain, a- and b-furanoses) have been studied in order to find the most stable structures in the gas phase. Received in revised form 18 June 2012 For that purpose, a large number of initial structures were explored at B3LYP/6-31G(d) level. All the min- Accepted 19 June 2012 ima obtained at this level were compared and duplicates removed. A further reoptimization of the Available online 27 June 2012 remaining structures was carried out at B3LYP/6-311++G(d,p) level. We characterized 174 and 170 min- ima for the open-chain structures of D-erythrose and D-threose, respectively, with relative energies that Keywords: range over an interval of just over 50 kJ/mol. In the case of the furanose configurations, the number of D-Erythrose minima is smaller by approximately one to two dozen. G3B3 calculations on the most stable minima indi- D-Threose DFT cate that the a-furanose configuration is the most stable for both D-erythrose and D-threose. -
(12) United States Patent (10) Patent No.: US 9,012,411 B2 Jacob (45) Date of Patent: Apr
USOO90 12411 B2 (12) United States Patent (10) Patent No.: US 9,012,411 B2 Jacob (45) Date of Patent: Apr. 21, 2015 (54) FORMULATIONS FROM DERIVATIVES OF 7,682,636 B2 3/2010 Babish et al. 7,736,679 B2 6/2010 Antony CURCUMIN, PACLITAXEL, AND ASPIRIN 2003/O147979 A1 8, 2003 Mae et al. 2003/O153512 A1 8/2003 Hergenhahn et al. (75) Inventor: James N. Jacob, Saunderstown, RI (US) 2005, OOO8682 A1 1/2005 Tramontana 2005, 0181036 A1 8/2005 Aggarwal et al. (73) Assignee: Organomed Corporation, Coventry, RI 2005/0208157 A1 9, 2005 Navarro et al. (US) 2005/0215487 A1* 9, 2005 Holicket al. ................... 514, 23 2005/0267221 A1 12/2005 Wellen 2006, OO67998 A1 3/2006 Kurzrock et al. (*) Notice: Subject to any disclaimer, the term of this 2006/0210656 A1 9/2006 Aggarwal patent is extended or adjusted under 35 2006/02284.03 A1 10, 2006 Zimmerman U.S.C. 154(b) by 58 days. 2007/0060644 A1 3/2007 Vander Jagt et al. 2007. O148263 A1 6/2007 Antony (21) Appl. No.: 13/537,814 2008/O193573 A1 8, 2008 Gow et al. 2009, O104294 A1 4/2009 Wenk et al. 2009/O131373 A1 5/2009 Giori et al. (22) Filed: Jun. 29, 2012 2009,0280199 A1 11/2009 Russell 2009, 0291 102 A1 11/2009 Fortin (65) Prior Publication Data 2010.0048901 A1 2/2010 Takahashi et al. US 2013/OO29922 A1 Jan. 31, 2013 2010, 0196496 A1 8, 2010 Fortin FOREIGN PATENT DOCUMENTS Related U.S. Application Data CN 1739509 A 3, 2006 (63) Continuation-in-part of application No.