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The Coral Trait Database, a Curated Database of Trait Information for Coral Species from the Global Oceans
www.nature.com/scientificdata OPEN The Coral Trait Database, a curated SUBJECT CATEGORIES » Community ecology database of trait information for » Marine biology » Biodiversity coral species from the global oceans » Biogeography 1 2 3 2 4 Joshua S. Madin , Kristen D. Anderson , Magnus Heide Andreasen , Tom C.L. Bridge , , » Coral reefs 5 2 6 7 1 1 Stephen D. Cairns , Sean R. Connolly , , Emily S. Darling , Marcela Diaz , Daniel S. Falster , 8 8 2 6 9 3 Erik C. Franklin , Ruth D. Gates , Mia O. Hoogenboom , , Danwei Huang , Sally A. Keith , 1 2 2 4 10 Matthew A. Kosnik , Chao-Yang Kuo , Janice M. Lough , , Catherine E. Lovelock , 1 1 1 11 12 13 Osmar Luiz , Julieta Martinelli , Toni Mizerek , John M. Pandolfi , Xavier Pochon , , 2 8 2 14 Morgan S. Pratchett , Hollie M. Putnam , T. Edward Roberts , Michael Stat , 15 16 2 Carden C. Wallace , Elizabeth Widman & Andrew H. Baird Received: 06 October 2015 28 2016 Accepted: January Trait-based approaches advance ecological and evolutionary research because traits provide a strong link to Published: 29 March 2016 an organism’s function and fitness. Trait-based research might lead to a deeper understanding of the functions of, and services provided by, ecosystems, thereby improving management, which is vital in the current era of rapid environmental change. Coral reef scientists have long collected trait data for corals; however, these are difficult to access and often under-utilized in addressing large-scale questions. We present the Coral Trait Database initiative that aims to bring together physiological, morphological, ecological, phylogenetic and biogeographic trait information into a single repository. -
Biological Results of the Chatham Islands 1954 Expedition
ISSN 2538-1016; 29 NEW ZEALAND DEPARTMENT OF SCIENTIFIC AND INDUSTRIAL RESEARCH BULLETIN 139 (6) Biological Results of The Chatham Islands 1954 Expedition PART 6 Scleractinia BY DONALD F. SQUIRES New Zealand Oceanographic Institute Memoir No. 29 1964 This publication is the sixth part of the Department of Scientificand Industrial Research Bulletin 139, which records the Biological Results of the Chatham Islands 1954 Expedition. Parts already published are: Part 1. Crustacea, by R. K. Dell, N. S. Jones, and J. C. Yaldwyn. Part 2. Archibenthal and Littoral Echinoderms, by H. Barraclough Fell. Part 3. Polychaeta Errantia, by G. A. Knox. Part 4. Marine Mollusca, by R. K. Dell; Sipunculoidea, by S. J. Edmonds. Part 5. Porifera: Demospongiae, by Patricia R. Bergquist; Porifera: Keratosa, by Patricia R. Bergquist; Crustacea Isopoda: Bopyridae, by R. B. Pike; Crustacea Isopoda: Serolidae, by D. E. Hurley; Hydroida, by Patricia M. Ralph. Additional parts are in preparation. A "General Account" of the Expedition was published as N.Z. Department of Scientific and Industrial Research Bulletin No. 122 (1957). BIOLOGICAL RESULTS OF THE CHATHAM ISLANDS 1954 EXPEDITION PART 6-SCLERACTINIA This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivs 3.0 Unported License. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-nd/3.0/ Photograph: G. A. Knox. The Sero/is bromleyana - Spatangus multispinus community on the sorting screen. Aberrant growth form of Flabellum knoxi is in the lower left(see also plate 1, figs. 4-6). The abundant tubes are those of Hya!inoecia tubicola, the large starfish is Zoroaster spinu!osus, the echinoids Parameretia multituberculata. -
The Global Body Size Biomass Spectrum Is Multimodal
Supplementary Information for The Global Body Size Biomass Spectrum is Multimodal Edward W. Tekwa, Katrina A. Catalano, Anna L. Bazzicalupo, Malin L. Pinsky Edward W. Tekwa Email: [email protected] This PDF file includes: SI Text Figures S1 to S2 Tables S1 to S8 SI References 1 Supplementary Information Text Statistical Evaluation of Allometric Trends and Multimodality. Statistical evaluations of the size- biomass relationship were performed among different classifications of organisms depending on ecological realms (marine, terrestrial, subterranean) and trophic levels (producer, consumer). The six classes are: all, terrestrial, marine, terrestrial and marine, producers, and consumers. To fit statistical relationships between size and biomass, we did not perform simple hypothesis tests directly on the best estimated spectra because 1) biomass datapoints are not independent across sizes within groups, and 2) the cross-taxa biomass at any size depends on all groups, making the error structure correlated across the size range. To obtain confidence bounds, we rely on a parametric bootstrapped ensemble of possible spectra. For each bootstrap, the possible continuous spectrum is sampled once per log size bin from -18 to 11, for a sample size of 30. This is a lower resolution than used for graphical purposes; here, 30 is likely a conservative estimate of the number of independent datapoints that contribute to the cross-taxa spectrum in any trophic or habitat class. We then performed statistical regressions on 200 bootstrap sampled sets, each obtained by independently sampling from the biomass error distribution of each group and summing by size. We then found the 2.5th and 97.5th percentiles of the outputs as each regression model’s 95% confidence bounds. -
Checklist of Fish and Invertebrates Listed in the CITES Appendices
JOINTS NATURE \=^ CONSERVATION COMMITTEE Checklist of fish and mvertebrates Usted in the CITES appendices JNCC REPORT (SSN0963-«OStl JOINT NATURE CONSERVATION COMMITTEE Report distribution Report Number: No. 238 Contract Number/JNCC project number: F7 1-12-332 Date received: 9 June 1995 Report tide: Checklist of fish and invertebrates listed in the CITES appendices Contract tide: Revised Checklists of CITES species database Contractor: World Conservation Monitoring Centre 219 Huntingdon Road, Cambridge, CB3 ODL Comments: A further fish and invertebrate edition in the Checklist series begun by NCC in 1979, revised and brought up to date with current CITES listings Restrictions: Distribution: JNCC report collection 2 copies Nature Conservancy Council for England, HQ, Library 1 copy Scottish Natural Heritage, HQ, Library 1 copy Countryside Council for Wales, HQ, Library 1 copy A T Smail, Copyright Libraries Agent, 100 Euston Road, London, NWl 2HQ 5 copies British Library, Legal Deposit Office, Boston Spa, Wetherby, West Yorkshire, LS23 7BQ 1 copy Chadwick-Healey Ltd, Cambridge Place, Cambridge, CB2 INR 1 copy BIOSIS UK, Garforth House, 54 Michlegate, York, YOl ILF 1 copy CITES Management and Scientific Authorities of EC Member States total 30 copies CITES Authorities, UK Dependencies total 13 copies CITES Secretariat 5 copies CITES Animals Committee chairman 1 copy European Commission DG Xl/D/2 1 copy World Conservation Monitoring Centre 20 copies TRAFFIC International 5 copies Animal Quarantine Station, Heathrow 1 copy Department of the Environment (GWD) 5 copies Foreign & Commonwealth Office (ESED) 1 copy HM Customs & Excise 3 copies M Bradley Taylor (ACPO) 1 copy ^\(\\ Joint Nature Conservation Committee Report No. -
Guide to Some Harvested Aquarium Corals Version 1.3
Guide to some harvested aquarium corals Version 1.3 ( )1 Large septal Guide to some harvested aquarium teeth corals Version 1.3 Septa Authors Morgan Pratchett & Russell Kelley, May 2020 ARC Centre of Excellence for Coral Reef Studies Septa James Cook University Townsville, Queensland 4811 Australia Contents • Overview in life… p3 • Overview of skeletons… p4 • Cynarina lacrymalis p5 • Acanthophyllia deshayesiana p6 • Homophyllia australis p7 • Micromussa pacifica p8 • Unidentified Lobophylliid p9 • Lobophyllia vitiensis p10 • Catalaphyllia jardinei p11 • Trachyphyllia geoffroyi p12 Mouth • Heterocyathus aequicostatus & Heteropsammia cochlea p13 Small • Cycloseris spp. p14 septal • Diaseris spp. p15 teeth • Truncatoflabellum sp. p16 Oral disk Meandering valley Bibliography p17 Acknowledgements FRDC (Project 2014-029) Image support: Russell Kelley, Cairns Marine, Ultra Coral, JEN Veron, Jake Adams, Roberto Arrigioni ( )2 Small septal teeth Guide to some commonly harvested aquarium corals - Version 1.3 Overview in life… SOLID DISKS WITH FLESHY POLYPS AND PROMINENT SEPTAL TEETH Cynarina p5 Acanthophyllia p6 Homophyllia p7 Micromussa p8 Unidentified Lobophylliid p9 5cm disc, 1-2cm deep, large, thick, white 5-10cm disc at top of 10cm curved horn. Tissue 5cm disc, 1-2cm deep. Cycles of septa strongly <5cm disc, 1-2cm deep. Cycles of septa slightly septal teeth usually visible through tissue. In unequal. Large, tall teeth at inner marigns of primary unequal. Teeth of primary septa less large / tall at conceals septa. In Australia usually brown with inner margins. Australia usually translucent green or red. blue / green trim. septa. In Australia traded specimens are typically variegated green / red / orange. 2-3cm disc, 1-2cm deep. Undescribed species traded as Homophyllia australis in West Australia and Northern Territory but now recognised as distinct on genetic and morphological grounds. -
Sexual Reproduction of the Solitary Sunset Cup Coral Leptopsammia Pruvoti (Scleractinia: Dendrophylliidae) in the Mediterranean
Marine Biology (2005) 147: 485–495 DOI 10.1007/s00227-005-1567-z RESEARCH ARTICLE S. Goffredo Æ J. Radetic´Æ V. Airi Æ F. Zaccanti Sexual reproduction of the solitary sunset cup coral Leptopsammia pruvoti (Scleractinia: Dendrophylliidae) in the Mediterranean. 1. Morphological aspects of gametogenesis and ontogenesis Received: 16 July 2004 / Accepted: 18 December 2004 / Published online: 3 March 2005 Ó Springer-Verlag 2005 Abstract Information on the reproduction in scleractin- came indented, assuming a sickle or dome shape. We can ian solitary corals and in those living in temperate zones hypothesize that the nucleus’ migration and change of is notably scant. Leptopsammia pruvoti is a solitary coral shape may have to do with facilitating fertilization and living in the Mediterranean Sea and along Atlantic determining the future embryonic axis. During oogene- coasts from Portugal to southern England. This coral sis, oocyte diameter increased from a minimum of 20 lm lives in shaded habitats, from the surface to 70 m in during the immature stage to a maximum of 680 lm depth, reaching population densities of >17,000 indi- when mature. Embryogenesis took place in the coelen- viduals mÀ2. In this paper, we discuss the morphological teron. We did not see any evidence that even hinted at aspects of sexual reproduction in this species. In a sep- the formation of a blastocoel; embryonic development arate paper, we report the quantitative data on the an- proceeded via stereoblastulae with superficial cleavage. nual reproductive cycle and make an interspecific Gastrulation took place by delamination. Early and late comparison of reproductive traits among Dend- embryos had diameters of 204–724 lm and 290–736 lm, rophylliidae aimed at defining different reproductive respectively. -
Volume 2. Animals
AC20 Doc. 8.5 Annex (English only/Seulement en anglais/Únicamente en inglés) REVIEW OF SIGNIFICANT TRADE ANALYSIS OF TRADE TRENDS WITH NOTES ON THE CONSERVATION STATUS OF SELECTED SPECIES Volume 2. Animals Prepared for the CITES Animals Committee, CITES Secretariat by the United Nations Environment Programme World Conservation Monitoring Centre JANUARY 2004 AC20 Doc. 8.5 – p. 3 Prepared and produced by: UNEP World Conservation Monitoring Centre, Cambridge, UK UNEP WORLD CONSERVATION MONITORING CENTRE (UNEP-WCMC) www.unep-wcmc.org The UNEP World Conservation Monitoring Centre is the biodiversity assessment and policy implementation arm of the United Nations Environment Programme, the world’s foremost intergovernmental environmental organisation. UNEP-WCMC aims to help decision-makers recognise the value of biodiversity to people everywhere, and to apply this knowledge to all that they do. The Centre’s challenge is to transform complex data into policy-relevant information, to build tools and systems for analysis and integration, and to support the needs of nations and the international community as they engage in joint programmes of action. UNEP-WCMC provides objective, scientifically rigorous products and services that include ecosystem assessments, support for implementation of environmental agreements, regional and global biodiversity information, research on threats and impacts, and development of future scenarios for the living world. Prepared for: The CITES Secretariat, Geneva A contribution to UNEP - The United Nations Environment Programme Printed by: UNEP World Conservation Monitoring Centre 219 Huntingdon Road, Cambridge CB3 0DL, UK © Copyright: UNEP World Conservation Monitoring Centre/CITES Secretariat The contents of this report do not necessarily reflect the views or policies of UNEP or contributory organisations. -
Sipunculans Associated with Coral Communities
Sipunculans Associated with Coral Communities MARY E. RICE Reprinted from MICRONESICA, Vol. 12, No. 1, 1976 I'riiilc'd in Japan Sipunculans Associated with Coral Communities' MARY E. RICE Department of Invertebrate Zoology, National Museum of Natural History Smithsonian Ins^litution, Washington, D.C. 20560 INTRODUCTION Sipunculans occupy several habitats within the coral-reef community, often occurring in great densities. They may be found in burrows of their own formation within dead coral rock, wedged into crevices of rock and rubble, under rocks, or within algal mats covering the surfaces of rocks. In addition, sand-burrowing species commonly occur in the sand around coral heads and on the sand flats of lagoons. Only one species of sipunculan is known to be associated with a living coral. This is Aspidosiphon jukesi Baird 1873 which lives commensally in the base of two genera of solitary corals, Heteropsammia and Heterocyatlnis. This review will consider first the mutualistic association of the sipunculan and solitary coral and then the association, more broadly defined, of the rock-boring and sand-burrowing sipun- culans as members of the coral reef community. MUTUALISM OF SIPUNCULAN AND SOLITARY CORAL The rather remarkable mutualistic association between the sipunculan Aspi- dosiphon jukesi and two genera of ahermatypic corals, Heteropsammia and Hetero- cyathus, is a classical example of commensalism (Edwards and Haime, 1848a, b; Bouvier, 1895; Sluiter, 1902; Schindewolf, 1958; Feustel, 1965; Goreau and Yonge, 1968; Yonge, 1975). The Aspidosiphon inhabits a spiral cavity in the base of the coral and, through an opening of the cavity on the under surface of the coral, the sipunculan extends its introvert into the surrounding substratum pulling the coral about as it probes and feeds in the sand (Figs. -
Structure of Mediterranean 'Cnidarian Populations In
Homage to Ramon Marga/et,· or, Why there is such p/easure in studying nature 243 (J. D. Ros & N. Prat, eds.). 1991 . Oec% gia aquatica, 10: 243-254 STRUCTURE OF 'CNIDARIAN POPULATIONS IN MEDITERRANEAN SUBLITTORAL BENTHIC COMMUNITIES AS A RESUL T OF ADAPTATION TO DIFFERENT ENVIRONMENTAL CONDITIONS 2 JOSEP-MARIA GILIl & ENRIe BALLESTEROs .• 1 Insti t de Ciencies del Mar (CSIC). Passeig Nacional, s/n. 08039 Barcelona. Spain 2 � Centre d'Estudis Avanc;:atsde Blanes (CSIC). Camí de Santa Barbara, s/n. 17300 Blanes. Spain Received: March 1990 SUMMARY The presence and abundance of Cnidarians, extremely cornmon in Mediterranean sublittoral benthic communities, exerts a profound effect on the entire structure of such communities, although the roles of Anthozoans and Hydrozoans differ in accordance with their different biological characteristics. Structural differences in benthic cnidarian populations were observed in three sublittoral cornmunities located within 100 m of each other yet differing considerably in light intensity and water movement. Species-area and Shannon's diversity-area curves were computed for each community from reticulate samples constituted by 18 subsamples 2 of 289 cm . Species-area curves were fitted to semilogarithmic functions, while diversity-area curves were fitted to Michaelis-Menten functions by the method of least squares. Species richness, species distribution, alpha-diversity, and pattem diversity were estimated from the fitted curves. Patch size for Anthozoans was smaller than that for Hydrozoans in all three communities. Diversity was greatest in the cornmunities with the lowest and with the highest light intensity and water flow levels, but species richness was highest in the intermediate community. -
Fauna of Australia 4A Phylum Sipuncula
FAUNA of AUSTRALIA Volume 4A POLYCHAETES & ALLIES The Southern Synthesis 5. PHYLUM SIPUNCULA STANLEY J. EDMONDS (Deceased 16 July 1995) © Commonwealth of Australia 2000. All material CC-BY unless otherwise stated. At night, Eunice Aphroditois emerges from its burrow to feed. Photo by Roger Steene DEFINITION AND GENERAL DESCRIPTION The Sipuncula is a group of soft-bodied, unsegmented, coelomate, worm-like marine invertebrates (Fig. 5.1; Pls 12.1–12.4). The body consists of a muscular trunk and an anteriorly placed, more slender introvert (Fig. 5.2), which bears the mouth at the anterior extremity of an introvert and a long, recurved, spirally wound alimentary canal lies within the spacious body cavity or coelom. The anus lies dorsally, usually on the anterior surface of the trunk near the base of the introvert. Tentacles either surround, or are associated with the mouth. Chaetae or bristles are absent. Two nephridia are present, occasionally only one. The nervous system, although unsegmented, is annelidan-like, consisting of a long ventral nerve cord and an anteriorly placed brain. The sexes are separate, fertilisation is external and cleavage of the zygote is spiral. The larva is a free-swimming trochophore. They are known commonly as peanut worms. AB D 40 mm 10 mm 5 mm C E 5 mm 5 mm Figure 5.1 External appearance of Australian sipunculans. A, SIPUNCULUS ROBUSTUS (Sipunculidae); B, GOLFINGIA VULGARIS HERDMANI (Golfingiidae); C, THEMISTE VARIOSPINOSA (Themistidae); D, PHASCOLOSOMA ANNULATUM (Phascolosomatidae); E, ASPIDOSIPHON LAEVIS (Aspidosiphonidae). (A, B, D, from Edmonds 1982; C, E, from Edmonds 1980) 2 Sipunculans live in burrows, tubes and protected places. -
The Reproductive Biology of the Scleractinian Coral Plesiastrea Versipora in Sydney Harbour, Australia
Vol. 1: 25–33, 2014 SEXUALITY AND EARLY DEVELOPMENT IN AQUATIC ORGANISMS Published online February 6 doi: 10.3354/sedao00004 Sex Early Dev Aquat Org OPEN ACCESS The reproductive biology of the scleractinian coral Plesiastrea versipora in Sydney Harbour, Australia Alisha Madsen1, Joshua S. Madin1, Chung-Hong Tan2, Andrew H. Baird2,* 1Department of Biological Sciences, Macquarie University, Sydney, New South Wales 2109, Australia 2ARC Centre of Excellence for Coral Reef Studies, James Cook University, Townsville, Queensland 4811, Australia ABSTRACT: The scleractinian coral Plesiastrea versipora occurs throughout most of the Indo- Pacific; however, the species is only abundant in temperate regions, including Sydney Harbour, in New South Wales, Australia, where it can be the dominant sessile organism over small spatial scales. Population genetics indicates that the Sydney Harbour population is highly isolated, sug- gesting long-term persistence will depend upon on the local production of recruits. To determine the potential role of sexual reproduction in population persistence, we examined a number of fea- tures of the reproductive biology of P. versipora for the first time, including the sexual system, the length of the gametogenetic cycles and size-specific fecundity. P. versipora was gonochoric, sup- porting recent molecular work removing the species from the Family Merulinidae, in which the species are exclusively hermaphroditic. The oogenic cycle was between 13 and 14 mo and the spermatogenetic cycle between 7 and 8 mo, with broadcast spawning inferred to occur in either January or February. Colony sex was strongly influenced by colony size: the probability of being male increased with colony area. The longer oogenic cycle suggests that females are investing energy in reproduction rather than growth, and consequently, males are on average larger for a given age. -
CNIDARIA Corals, Medusae, Hydroids, Myxozoans
FOUR Phylum CNIDARIA corals, medusae, hydroids, myxozoans STEPHEN D. CAIRNS, LISA-ANN GERSHWIN, FRED J. BROOK, PHILIP PUGH, ELLIOT W. Dawson, OscaR OcaÑA V., WILLEM VERvooRT, GARY WILLIAMS, JEANETTE E. Watson, DENNIS M. OPREsko, PETER SCHUCHERT, P. MICHAEL HINE, DENNIS P. GORDON, HAMISH J. CAMPBELL, ANTHONY J. WRIGHT, JUAN A. SÁNCHEZ, DAPHNE G. FAUTIN his ancient phylum of mostly marine organisms is best known for its contribution to geomorphological features, forming thousands of square Tkilometres of coral reefs in warm tropical waters. Their fossil remains contribute to some limestones. Cnidarians are also significant components of the plankton, where large medusae – popularly called jellyfish – and colonial forms like Portuguese man-of-war and stringy siphonophores prey on other organisms including small fish. Some of these species are justly feared by humans for their stings, which in some cases can be fatal. Certainly, most New Zealanders will have encountered cnidarians when rambling along beaches and fossicking in rock pools where sea anemones and diminutive bushy hydroids abound. In New Zealand’s fiords and in deeper water on seamounts, black corals and branching gorgonians can form veritable trees five metres high or more. In contrast, inland inhabitants of continental landmasses who have never, or rarely, seen an ocean or visited a seashore can hardly be impressed with the Cnidaria as a phylum – freshwater cnidarians are relatively few, restricted to tiny hydras, the branching hydroid Cordylophora, and rare medusae. Worldwide, there are about 10,000 described species, with perhaps half as many again undescribed. All cnidarians have nettle cells known as nematocysts (or cnidae – from the Greek, knide, a nettle), extraordinarily complex structures that are effectively invaginated coiled tubes within a cell.