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PDF Output of CLIC (Clustering by Inferred Co-Expression) PDF Output of CLIC (clustering by inferred co-expression) Dataset: Num of genes in input gene set: 13 Total number of genes: 16493 CLIC PDF output has three sections: 1) Overview of Co-Expression Modules (CEMs) Heatmap shows pairwise correlations between all genes in the input query gene set. Red lines shows the partition of input genes into CEMs, ordered by CEM strength. Each row shows one gene, and the brightness of squares indicates its correlations with other genes. Gene symbols are shown at left side and on the top of the heatmap. 2) Details of each CEM and its expansion CEM+ Top panel shows the posterior selection probability (dataset weights) for top GEO series datasets. Bottom panel shows the CEM genes (blue rows) as well as expanded CEM+ genes (green rows). Each column is one GEO series dataset, sorted by their posterior probability of being selected. The brightness of squares indicates the gene's correlations with CEM genes in the corresponding dataset. CEM+ includes genes that co-express with CEM genes in high-weight datasets, measured by LLR score. 3) Details of each GEO series dataset and its expression profile: Top panel shows the detailed information (e.g. title, summary) for the GEO series dataset. Bottom panel shows the background distribution and the expression profile for CEM genes in this dataset. Overview of Co-Expression Modules (CEMs) with Dataset Weighting Scale of average Pearson correlations Num of Genes in Query Geneset: 13. Num of CEMs: 1. 0.0 0.2 0.4 0.6 0.8 1.0 Dnah6 Dnali1 Dnah7a Dnah2 Dnah1 Dnah8 Dnah5 Dnah9 Dnal4 Dnah11 Dnaic2 Dync2li1 Dnah17 Dnah6 Dnali1 Dnah7a Dnah2 Dnah1 Dnah8 Dnah5 CEM 1 (36 datasets) Dnah9 Dnal4 Dnah11 Dnaic2 Dync2li1 Dnah17 1700003M02Rik 1700012B09Rik 1700088E04Rik 4930444P10Rik 1700019L03Rik 1700001L19Rik Symbol Num ofCEMGenes:13.Predicted1063.SelectedDatasets:36.Strength:0.7 CEM 1,Geneset"[G]axonemaldyneincomplex",Page1 Tsnaxip1 Dync2li1 Dynlrb2 Mapk15 Dnah17 Dnah11 Dnah7a Dnah12 Akap14 Ccdc11 Ccdc19 Maats1 B3gnt4 Gm101 Dnaic2 Ttc21a Armc4 Lrrc48 Lrrc23 Wdr63 Wdr65 Dnah9 Dnah5 Dnah8 Dnah1 Dnah2 Dnah6 Spag8 Dnali1 Fank1 Lrguk Dnal4 Stk33 Tcte1 Ttc29 Fsip1 Foxj1 Tekt4 Rtdr1 Eno4 Zbbx Mak Pifo Ak7 0.0 1.0 GSE40939 [10] GSE10813 [12] GSE8726 [7] Only showingfirst200datasets-Seetxtoutputforfulldetails. GSE10192 [24] GSE50122 [10] GSE32020 [26] GSE30865 [68] GSE15401 [18] GSE39391 [21] GSE17923 [6] GSE12769 [20] GSE31972 [6] GSE7831 [14] GSE23908 [31] GSE9038 [24] GSE42601 [6] GSE9977 [24] GSE56236 [12] GSE1871 [12] GSE27630 [8] GSE9743 [12] GSE18534 [15] GSE31013 [12] GSE27568 [16] GSE29081 [6] GSE9954 [70] GSE10246 [182] GSE24207 [73] GSE13106 [10] GSE3100 [23] GSE17097 [20] GSE1983 [6] GSE8498 [6] GSE17373 [24] GSE10849 [6] GSE45487 [9] GSE28664 [17] GSE49128 [17] GSE18765 [14] GSE34765 [6] GSE7275 [8] GSE31940 [8] GSE32330 [12] GSE35435 [6] GSE35436 [6] GSE33770 [8] GSE6837 [8] GSE14481 [12] GSE5128 [18] GSE23408 [39] GSE14843 [6] GSE13103 [8] GSE19517 [6] GSE22448 [6] GSE35219 [6] GSE10528 [6] GSE25029 [56] GSE23600 [10] GSE40655 [6] GSE7809 [8] GSE27261 [8] GSE27987 [31] GSE50123 [6] GSE22527 [6] GSE26476 [6] GSE40261 [8] GSE55607 [18] GSE31208 [8] GSE9735 [9] GSE36336 [6] GSE12536 [6] GSE23505 [10] GSE9330 [8] GSE10989 [6] GSE30655 [35] GSE32422 [6] GSE4260 [6] GSE13149 [25] GSE29145 [10] GSE27717 [11] GSE57425 [6] GSE3889 [20] GSE20260 [48] GSE23584 [36] GSE4193 [8] GSE34807 [20] GSE27546 [51] GSE18704 [9] GSE13306 [17] GSE38215 [11] GSE18660 [10] GSE47425 [7] GSE23200 [6] GSE11982 [6] GSE7605 [18] GSE24295 [7] GSE41807 [6] GSE10639 [8] GSE33101 [8] GSE25778 [6] GSE14354 [6] GSE20954 [14] GSE17745 [6] GSE32681 [61] GSE18551 [18] GSE11759 [6] GSE49283 [12] GSE13225 [6] GSE19668 [50] GSE19194 [14] GSE35091 [11] GSE35226 [12] GSE33341 [227] GSE17096 [20] GSE31797 [6] GSE22034 [8] GSE15724 [9] GSE13229 [6] GSE27675 [14] GSE27720 [6] GSE15458 [8] GSE21193 [10] GSE7020 [8] GSE9443 [24] GSE22180 [60] GSE4765 [6] GSE4230 [8] GSE20366 [23] GSE21546 [24] GSE10239 [12] GSE19338 [24] GSE7699 [6] GSE17553 [16] GSE8407 [17] GSE7333 [6] GSE26461 [6] GSE20390 [6] GSE25640 [12] GSE54976 [17] GSE7596 [6] GSE43635 [9] GSE23081 [6] GSE5298 [8] GSE8349 [10] GSE17783 [19] GSE20152 [8] GSE33134 [31] GSE18745 [6] GSE19997 [9] GSE32963 [6] GSE20426 [35] GSE18341 [30] GSE18993 [13] GSE10478 [6] CEM+ CEM GSE22989 [10] GSE58915 [21] GSE55028 [6] GSE12465 [14] GSE18010 [29] GSE28417 [12] 0.0 GSE52101 [17] GSE13526 [6] GSE7958 [12] Scale ofaveragePearsoncorrelations GSE13753 [10] GSE42008 [6] GSE23016 [9] GSE8249 [46] GSE11259 [9] GSE5763 [9] 0.2 GSE36378 [20] GSE5891 [6] GSE37301 [20] GSE9975 [36] GSE9338 [42] GSE17112 [8] GSE22140 [13] GSE19079 [6] GSE34863 [8] 0.4 GSE38672 [6] GSE24614 [6] GSE45044 [12] GSE17404 [9] GSE16564 [15] GSE29382 [36] GSE46496 [9] GSE35761 [6] GSE46150 [8] 0.6 GSE16874 [12] GSE24489 [14] GSE43197 [27] GSE6675 [8] GSE8488 [15] GSE18597 [42] GSE9441 [36] GSE11818 [6] GSE10904 [6] 0.8 GSE13148 [10] GSE19925 [6] GSE40087 [15] GSE29082 [6] Score 13.78 13.84 13.91 13.97 14.38 14.48 14.66 14.75 14.76 14.82 14.83 15.01 15.05 15.16 15.21 15.37 15.43 15.51 15.62 15.62 15.75 15.78 15.87 15.99 16.11 16.22 16.61 16.62 16.72 17.14 17.14 17.25 17.51 17.55 17.63 17.88 18.35 1.0 Notes 1700007G11Rik 6820408C15Rik 1700026D08Rik 4930430A15Rik 1700016K19Rik 1700028P14Rik 1700023E05Rik 4933412E24Rik 1700013F07Rik Symbol Num ofCEMGenes:13.Predicted1063.SelectedDatasets:36.Strength:0.7 CEM 1,Geneset"[G]axonemaldyneincomplex",Page2 Zmynd12 Zmynd10 Fam179a Fam227a Rsph10b Ccdc176 Ccdc74a Ccdc113 Ccdc146 Ccdc103 Ppp1r42 Efcab10 Spata33 Ccdc13 Ccdc96 Dnaic1 Zfp474 Mdh1b Vwa3b Got1l1 Lrrc34 Wdr96 Wdr16 Wdr66 Wdr27 Riiad1 Dydc2 Spag6 Caps2 Morn5 Styxl1 Enkur Nme5 Cdkl4 Ttc16 Btg4 Efhb Ulk4 Iqcd Ttll6 Kif9 0.0 1.0 GSE40939 [10] GSE10813 [12] GSE8726 [7] Only showingfirst200datasets-Seetxtoutputforfulldetails. GSE10192 [24] GSE50122 [10] GSE32020 [26] GSE30865 [68] GSE15401 [18] GSE39391 [21] GSE17923 [6] GSE12769 [20] GSE31972 [6] GSE7831 [14] GSE23908 [31] GSE9038 [24] GSE42601 [6] GSE9977 [24] GSE56236 [12] GSE1871 [12] GSE27630 [8] GSE9743 [12] GSE18534 [15] GSE31013 [12] GSE27568 [16] GSE29081 [6] GSE9954 [70] GSE10246 [182] GSE24207 [73] GSE13106 [10] GSE3100 [23] GSE17097 [20] GSE1983 [6] GSE8498 [6] GSE17373 [24] GSE10849 [6] GSE45487 [9] GSE28664 [17] GSE49128 [17] GSE18765 [14] GSE34765 [6] GSE7275 [8] GSE31940 [8] GSE32330 [12] GSE35435 [6] GSE35436 [6] GSE33770 [8] GSE6837 [8] GSE14481 [12] GSE5128 [18] GSE23408 [39] GSE14843 [6] GSE13103 [8] GSE19517 [6] GSE22448 [6] GSE35219 [6] GSE10528 [6] GSE25029 [56] GSE23600 [10] GSE40655 [6] GSE7809 [8] GSE27261 [8] GSE27987 [31] GSE50123 [6] GSE22527 [6] GSE26476 [6] GSE40261 [8] GSE55607 [18] GSE31208 [8] GSE9735 [9] GSE36336 [6] GSE12536 [6] GSE23505 [10] GSE9330 [8] GSE10989 [6] GSE30655 [35] GSE32422 [6] GSE4260 [6] GSE13149 [25] GSE29145 [10] GSE27717 [11] GSE57425 [6] GSE3889 [20] GSE20260 [48] GSE23584 [36] GSE4193 [8] GSE34807 [20] GSE27546 [51] GSE18704 [9] GSE13306 [17] GSE38215 [11] GSE18660 [10] GSE47425 [7] GSE23200 [6] GSE11982 [6] GSE7605 [18] GSE24295 [7] GSE41807 [6] GSE10639 [8] GSE33101 [8] GSE25778 [6] GSE14354 [6] GSE20954 [14] GSE17745 [6] GSE32681 [61] GSE18551 [18] GSE11759 [6] GSE49283 [12] GSE13225 [6] GSE19668 [50] GSE19194 [14] GSE35091 [11] GSE35226 [12] GSE33341 [227] GSE17096 [20] GSE31797 [6] GSE22034 [8] GSE15724 [9] GSE13229 [6] GSE27675 [14] GSE27720 [6] GSE15458 [8] GSE21193 [10] GSE7020 [8] GSE9443 [24] GSE22180 [60] GSE4765 [6] GSE4230 [8] GSE20366 [23] GSE21546 [24] GSE10239 [12] GSE19338 [24] GSE7699 [6] GSE17553 [16] GSE8407 [17] GSE7333 [6] GSE26461 [6] GSE20390 [6] GSE25640 [12] GSE54976 [17] GSE7596 [6] GSE43635 [9] GSE23081 [6] GSE5298 [8] GSE8349 [10] GSE17783 [19] GSE20152 [8] GSE33134 [31] GSE18745 [6] GSE19997 [9] GSE32963 [6] GSE20426 [35] GSE18341 [30] GSE18993 [13] GSE10478 [6] CEM+ CEM GSE22989 [10] GSE58915 [21] GSE55028 [6] GSE12465 [14] GSE18010 [29] GSE28417 [12] 0.0 GSE52101 [17] GSE13526 [6] GSE7958 [12] Scale ofaveragePearsoncorrelations GSE13753 [10] GSE42008 [6] GSE23016 [9] GSE8249 [46] GSE11259 [9] GSE5763 [9] 0.2 GSE36378 [20] GSE5891 [6] GSE37301 [20] GSE9975 [36] GSE9338 [42] GSE17112 [8] GSE22140 [13] GSE19079 [6] GSE34863 [8] 0.4 GSE38672 [6] GSE24614 [6] GSE45044 [12] GSE17404 [9] GSE16564 [15] GSE29382 [36] GSE46496 [9] GSE35761 [6] GSE46150 [8] 0.6 GSE16874 [12] GSE24489 [14] GSE43197 [27] GSE6675 [8] GSE8488 [15] GSE18597 [42] GSE9441 [36] GSE11818 [6] GSE10904 [6] 0.8 GSE13148 [10] GSE19925 [6] GSE40087 [15] GSE29082 [6] Score 11.66 11.69 11.71 11.72 11.80 11.86 11.87 11.88 11.91 11.91 11.93 11.98 12.05 12.06 12.08 12.08 12.09 12.10 12.13 12.50 12.58 12.60 12.65 12.69 12.81 12.89 12.92 12.98 12.99 13.09 13.12 13.15 13.20 13.22 13.23 13.28 13.37 13.37 13.41 13.47 13.48 13.50 13.50 13.55 13.56 13.63 13.68 13.70 13.71 13.76 1.0 Notes E230008N13Rik 1110017D15Rik 4921536K21Rik 1700129C05Rik 4932418E24Rik 1700009P17Rik 2410004P03Rik Symbol Num ofCEMGenes:13.Predicted1063.SelectedDatasets:36.Strength:0.7 CEM 1,Geneset"[G]axonemaldyneincomplex",Page3 Tmem30c Fam183b Mycbpap Trpd52l3 Ccdc151 Ccdc108 Ccdc110 Ssmem1 Ccdc114 Ankrd45 Ppp1r36 Efcab12 Spata18 Lrrc10b Ubxn10 Mroh2b Spag17 Spag16 Ccdc40 Ccdc67 Ccdc89 Fbxo36 Gm884 Dnaaf1 Spats1 Spata4 Efcab6 Ttc39d Tcam1 Armc3 Adad1 Dydc1 Tcp11 Odf3b Stpg1 Tdrd5 Efhc1 Ribc1 Spef2 Lrrc6 Cib4 Frs3 Acr 0.0 1.0 GSE40939 [10] GSE10813 [12] GSE8726 [7] Only showingfirst200datasets-Seetxtoutputforfulldetails. GSE10192 [24] GSE50122 [10] GSE32020 [26] GSE30865 [68] GSE15401 [18] GSE39391 [21] GSE17923 [6] GSE12769 [20] GSE31972 [6] GSE7831
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