Possible Modes of Transmission of Novel Coronavirus SARS-Cov-2
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An Atlas of Potentially Water-Related Diseases in South Africa
AN ATLAS OF POTENTIALLY WATER-RELATED DISEASES IN SOUTH AFRICA Volume 2 Bibliography Report to the WATER RESEARCH COMMISSION by N Coetzee and D E Bourne Department of Community Health University of Cape Town Medical School WRC Report no. 584/2/96 ISBN 1 86845 245 X ISBN Set No 1 86845 246 8 1 CONTENTS VOLUME 2 BIBLIOGRAPHY 1 Introduction 2 2 Amoebiasis 3 3 Arthropod-borne viral diseases 7 4 Cholera 10 5 Diarrhoeal diseases in childhood 14 6 Viral hepatitis A and E 17 7 Leptospirosis 20 3 Pediculosis 22 9 Malaria 23 10 Poliomyelitis 29 11 Scabies 33 12 Schistosomiasis 35 13 Trachoma 39 14 Typhoid Fever 42 15 Intestinal helminthiasis 46 1. INTRODUCTION As many professionals involved in the management of water resources do not have a medical or public health background, it was thought that an explanatory bibliography of the major water related diseases in South Africa would be of use. Each section of the bibliography has (where appropriate) the following sections: 1. Aetiology 2. Transmission 3. Preventive and curative steps 4. South African data 5. References The MEDLINE data base of the national Library of Medicine, Washington DC, and the WATERLIT data base of the CSIR were searched. These were supplemented by South African journals and reports not appearing in the MEDLINE data base. 3 2. AMOEBIASIS 2.1. Aetiology The protozoan parasite Entamoeba histolytica which causes amoebiasis may exist as a hardy infective cyst or a more fragile and potentially pathogenic trophozoite (the "amoebic" form). Amoebiasis most commonly affects the colon and rectum as primary sitas of infection, with extraintestinal (most commonly liver abscesses), local or systemic, spread possible if not treated early. -
Estimating the Instantaneous Asymptomatic Proportion with a Simple Approach: Exemplified with the Publicly Available COVID-19 Surveillance Data in Hong Kong
ORIGINAL RESEARCH published: 03 May 2021 doi: 10.3389/fpubh.2021.604455 Estimating the Instantaneous Asymptomatic Proportion With a Simple Approach: Exemplified With the Publicly Available COVID-19 Surveillance Data in Hong Kong Chunyu Li 1†, Shi Zhao 2,3*†, Biao Tang 4,5, Yuchen Zhu 1, Jinjun Ran 6, Xiujun Li 1*‡ and Daihai He 7*‡ 1 2 Edited by: Department of Biostatistics, School of Public Health, Cheeloo College of Medicine, Shandong University, Jinan, China, JC 3 Catherine Ropert, School of Public Health and Primary Care, Chinese University of Hong Kong, Hong Kong, China, Chinese University of 4 Federal University of Minas Hong Kong (CUHK) Shenzhen Research Institute, Shenzhen, China, School of Mathematics and Statistics, Xi’an Jiaotong 5 Gerais, Brazil University, Xi’an, China, Laboratory for Industrial and Applied Mathematics, Department of Mathematics and Statistics, York University, Toronto, ON, Canada, 6 School of Public Health, Li Ka Shing Faculty of Medicine, University of Hong Kong, Reviewed by: Hong Kong, China, 7 Department of Applied Mathematics, Hong Kong Polytechnic University, Hong Kong, China Mohammad Javanbakht, Baqiyatallah University of Medical Sciences, Iran Background: The asymptomatic proportion is a critical epidemiological characteristic Changjing Zhuge, that modulates the pandemic potential of emerging respiratory virus, which may vary Beijing University of Technology, China *Correspondence: depending on the nature of the disease source, population characteristics, source–host Daihai He interaction, and environmental factors. [email protected] Xiujun Li Methods: We developed a simple likelihood-based framework to estimate the [email protected] instantaneous asymptomatic proportion of infectious diseases. Taking the COVID-19 Shi Zhao epidemics in Hong Kong as a case study, we applied the estimation framework [email protected] to estimate the reported asymptomatic proportion (rAP) using the publicly available † These authors share first authorship surveillance data. -
Global Dynamics of a Vaccination Model for Infectious Diseases with Asymptomatic Carriers
MATHEMATICAL BIOSCIENCES doi:10.3934/mbe.2016019 AND ENGINEERING Volume 13, Number 4, August 2016 pp. 813{840 GLOBAL DYNAMICS OF A VACCINATION MODEL FOR INFECTIOUS DISEASES WITH ASYMPTOMATIC CARRIERS Martin Luther Mann Manyombe1;2 and Joseph Mbang1;2 Department of Mathematics, Faculty of Science University of Yaounde 1, P.O. Box 812 Yaounde, Cameroon 1;2;3; Jean Lubuma and Berge Tsanou ∗ Department of Mathematics and Applied Mathematics University of Pretoria, Pretoria 0002, South Africa (Communicated by Abba Gumel) Abstract. In this paper, an epidemic model is investigated for infectious dis- eases that can be transmitted through both the infectious individuals and the asymptomatic carriers (i.e., infected individuals who are contagious but do not show any disease symptoms). We propose a dose-structured vaccination model with multiple transmission pathways. Based on the range of the explic- itly computed basic reproduction number, we prove the global stability of the disease-free when this threshold number is less or equal to the unity. Moreover, whenever it is greater than one, the existence of the unique endemic equilibrium is shown and its global stability is established for the case where the changes of displaying the disease symptoms are independent of the vulnerable classes. Further, the model is shown to exhibit a transcritical bifurcation with the unit basic reproduction number being the bifurcation parameter. The impacts of the asymptomatic carriers and the effectiveness of vaccination on the disease transmission are discussed through through the local and the global sensitivity analyses of the basic reproduction number. Finally, a case study of hepatitis B virus disease (HBV) is considered, with the numerical simulations presented to support the analytical results. -
REALM Research Briefing: Vaccines, Variants, and Venitlation
Briefing: Vaccines, Variants, and Ventilation A Briefing on Recent Scientific Literature Focused on SARS-CoV-2 Vaccines and Variants, Plus the Effects of Ventilation on Virus Spread Dates of Search: 01 January 2021 through 05 July 2021 Published: 22 July 2021 This document synthesizes various studies and data; however, the scientific understanding regarding COVID-19 is continuously evolving. This material is being provided for informational purposes only, and readers are encouraged to review federal, state, tribal, territorial, and local guidance. The authors, sponsors, and researchers are not liable for any damages resulting from use, misuse, or reliance upon this information, or any errors or omissions herein. INTRODUCTION Purpose of This Briefing • Access to the latest scientific research is critical as libraries, archives, and museums (LAMs) work to sustain modified operations during the continuing severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) pandemic. • As an emerging event, the SARS-CoV-2 pandemic continually presents new challenges and scientific questions. At present, SARS-CoV-2 vaccines and variants in the US are two critical areas of focus. The effects of ventilation-based interventions on the spread of SARS-CoV-2 are also an interest area for LAMs. This briefing provides key information and results from the latest scientific literature to help inform LAMs making decisions related to these topics. How to Use This Briefing: This briefing is intended to provide timely information about SARS-CoV-2 vaccines, variants, and ventilation to LAMs and their stakeholders. Due to the evolving nature of scientific research on these topics, the information provided here is not intended to be comprehensive or final. -
COVID-19 Scientific Advisory Group Rapid Response Report
COVID-19 Scientific Advisory Group Rapid Response Report Key Research Question: What is the evidence supporting the possibility of asymptomatic transmission of SARS-CoV-2? [Updated April 13, 2020] Context • Asymptomatic transmission (including pre-symptomatic transmission) of SARS-CoV-2 could reduce the effectiveness of control measures that are related to symptom onset (isolation, face masks and enhanced hygiene for symptomatic persons, and parameters of contact tracing), particularly if routine practices, including the use of diligent hand hygiene and environmental disinfection after patient encounters are not adhered to. • Concerns regarding asymptomatic transmission are driven by observations in various populations that suggested 18% – 50.5% of people with positive RT-PCR in various settings were asymptomatic at testing, and epidemiologic modelling suggesting that asymptomatic or presymptomatic cases may be responsible for potentially significant transmission, with a wide range of estimates from 0% to 44%. However, this is discrepant from epidemiologic descriptions from the initial epidemic in China and elsewhere which do not suggest that asymptomatic transmission is a major driver for the COVID19 epidemic. • The Public Health Agency of Canada (PHAC) has indicated that wearing a non-medical (cloth) mask in the community has not been proven to protect the person wearing it, however, it can be an additional measure to protect others around you, and might be useful in situations where physical distancing is not possible (e.g., grocery stores and public transit). (Tasker, 2020; Public Health Agency of Canada, 2020) Key Messages from the Evidence Summary • It is biologically plausible that SARS-CoV-2 can be transmitted when patients are asymptomatic, pre-symptomatic, or mildly symptomatic (potentially from 2.5 days prior to onset of symptoms), based on the finding that RT-PCR levels are high early in infection. -
A Predictive Modelling Framework for COVID-19 Transmission to Inform the Management of Mass Events
medRxiv preprint doi: https://doi.org/10.1101/2021.05.13.21256857; this version posted May 16, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted medRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license . A Predictive Modelling Framework for COVID-19 Transmission to Inform the Management of Mass Events Claire Donnat Freddy Bunbury Department of Statistics Department of Plant Biology University of Chicago, Chicago, USA Carnegie Institution for Science, Stanford, USA [email protected] [email protected] Jack Kreindler Filippos T. Filippidis School of Public Health School of Public Health Imperial College, London, UK Imperial College, London, UK [email protected] [email protected] Austen El-Osta Tõnu Esko Matthew Harris School of Public Health Institute of Genomics School of Public Health Imperial College, London, UK University of Tartu, Tartu, Estonia Imperial College, London, UK [email protected] [email protected] [email protected] Abstract Modelling COVID-19 transmission at live events and public gatherings is essential to evaluate and control the probability of subsequent outbreaks. Model estimates can be used to inform event organizers about the possibility of super-spreading and the predicted efficacy of safety protocols, as well as to communicate to participants their personalised risk so that they may choose whether to attend. Yet, despite the fast-growing body of literature on COVID transmission dynamics, current risk models either neglect contextual information on vaccination rates or disease prevalence or do not attempt to quantitatively model transmission, thus limiting their potential to provide insightful estimates. -
From the COCCI Syndemic to the COVID-19 Pandemic
Scholars Insight Publishers Journal of Epidemiology and Global Health Research Research Article Open Access From the COCCI Syndemic to the COVID-19 Pandemic: A Cautionary Tale Interaction of Metabolic Syndrome, Obesity, Particulate Matter (PM), SARS-CoV-2 and the inflammatory response Clearfield M*, Gayer G, Wagner A, Stevenson T, Shubrook J and Gugliucci A Touro University College of Osteopathic Medicine, California, USA Corresponding Author: Dr. Clearfield M, Touro University Abstract College of Osteopathic Medicine, California, USA. A narrative review of the literature was conducted to determine E-mail id: [email protected] associations between cardiovascular (CV) risk factors associated with the COCCI syndemic (Cardiovascular disease as a result of the Received Date: March 15, 2021; interactions between obesity, climate change and inflammation) and Accepted Date: May 19, 2021; COVID-19. Published Date: May 21, 2021; The COCCI syndemic consists of two health conditions Publisher: Scholars Insight Online Publishers (dysmetabolic obesity and air pollution) that interact via biologic Citation: Clearfield M*, Gayer G, Wagner A, Stevenson T, pathways admixed with social, economic and ecologic drivers Shubrook J and Gugliucci A “From the COCCI Syndemic to augmenting adverse clinical outcomes in excess of either of these the COVID-19 Pandemic: A Cautionary Tale Interaction of health conditions individually. Metabolic Syndrome, Obesity, Particulate Matter (PM), SARS- The comorbidities noted with COVID-19 are in large part aligned CoV-2 and the inflammatory response”. J Epidemiol Glob Health with those traditional risk factors associated with CVD. In addition, Res. 2021; 1:102 when the traditional CV comorbidities are combined with the Copyright: ©2021 Clearfield M. -
Zoonotic Diseases Fact Sheet
ZOONOTIC DISEASES FACT SHEET s e ion ecie s n t n p is ms n e e s tio s g s m to a a o u t Rang s p t tme to e th n s n m c a s a ra y a re ho Di P Ge Ho T S Incub F T P Brucella (B. Infected animals Skin or mucous membrane High and protracted (extended) fever. 1-15 weeks Most commonly Antibiotic melitensis, B. (swine, cattle, goats, contact with infected Infection affects bone, heart, reported U.S. combination: abortus, B. suis, B. sheep, dogs) animals, their blood, tissue, gallbladder, kidney, spleen, and laboratory-associated streptomycina, Brucellosis* Bacteria canis ) and other body fluids causes highly disseminated lesions bacterial infection in tetracycline, and and abscess man sulfonamides Salmonella (S. Domestic (dogs, cats, Direct contact as well as Mild gastroenteritiis (diarrhea) to high 6 hours to 3 Fatality rate of 5-10% Antibiotic cholera-suis, S. monkeys, rodents, indirect consumption fever, severe headache, and spleen days combination: enteriditis, S. labor-atory rodents, (eggs, food vehicles using enlargement. May lead to focal chloramphenicol, typhymurium, S. rep-tiles [especially eggs, etc.). Human to infection in any organ or tissue of the neomycin, ampicillin Salmonellosis Bacteria typhi) turtles], chickens and human transmission also body) fish) and herd animals possible (cattle, chickens, pigs) All Shigella species Captive non-human Oral-fecal route Ranges from asymptomatic carrier to Varies by Highly infective. Low Intravenous fluids primates severe bacillary dysentery with high species. 16 number of organisms and electrolytes, fevers, weakness, severe abdominal hours to 7 capable of causing Antibiotics: ampicillin, cramps, prostration, edema of the days. -
Office & Workplace
Office & Workplace Health & Safety Best Practices in the time of COVID-19 – a guide 1 May 2020 CONTENT A. Purpose of Document 3 B. The Importance of a Healthy & Safe Workplace 4 C. Health & Safety Framework 5 D. Office Building • Ingress / Egress…………………………….6 1. Screening at Points of Entry 2. Handling Package deliveries • Environmental Cleanliness…………………8 1. Sanitiser stations 2. Signage & Posters 3. Cleaning & Disinfecting surfaces 4. Waste Management 5. Air Ventilation & Humidity 6. Door handles & knobs and lifts • Workspace & Facilities……………………..12 1. Desk space distancing 2. Sidewalk/5-foot ways/Stairs/Lifts 3. Telecommunication/Internet 4. Meeting Rooms 5. Event Rooms / Congregation Space 6. Pantry/Cafeteria 7. Washroom & Washing Facilities 8. Toilet Enhancements 9. Printing/Stationery room 10. Surau/Prayer room/Nursing room/Rest area • Social Practice…………………………...….18 1. Physical Distancing 2. Personal Hygiene 3. Respiratory Etiquette 4. Be a Digital Nomad 5. Paperwork & Filing System 6. Keep Each Other Protected • Administration Control…………………….22 1. COVID-19 Response Plan 2. Contingency Plan 3. Software & Apps 4. Daily Records 5. Provide Support 6. Isolation room / area E. References 25 F. Hotlines 26 2 BASIC PROTECTIVE MEASURES AGAINST COVID-19 A. PURPOSE OF DOCUMENT While the practice of remote working has sufficed for the short run, physical offices and construction sites will need to begin operating again in larger and smaller cities. Various entities at federal, provincial and municipal level have already prepared extensive post- quarantine COVID-19 Guidelines, SOP’s and Response Plans. These have now been made available online and can be used as a reference for companies and organisations to create documents of their own tailored to their specific needs. -
Epidemiology Annual Report
2018 Epidemiology Annual Report 535 South Loop 288 Denton, TX 76205-4502 www.DentonCounty.gov/Health Denton County Public Health Director Matt Richardson, DrPH, MPH Epidemiology Division Chief Epidemiologist Juan Rodriguez, MPH Epidemiologist Lily Metzler, MPH Epidemiologist Taylor Keplin, MPH Epidemiologist Abby Hoffman, M.S. Acknowledgments This report was prepared by the Epidemiology Division staff. We wish to acknowledge the contribution of our health care providers for reporting notifiable conditions and their cooperation in diseases investigations. In addition, we wish to thank Denton County Public Health staff and Medical Reserve Corp for their assistance in disease surveillance and investigations along with our colleagues at the Texas Department of State Health Services for providing data used in this report. Methodology The total population estimates used in this report were collected from the Texas Demographic Center1 and represent the population estimates for Denton County as of July 1, 2018. Population estimates may vary from previous Epidemiology Annual Reports due to changes of these estimates and are not directly associated to population estimates produced by the U.S. Census Bureau. The Sexually Transmitted Disease (STD) and Human Immunodeficiency Virus (HIV) case numbers and rates for Denton County were obtained from the Texas Department of State Health Services STD Surveillance Program Dashboard2. STD and HIV rates were calculated by the Texas Department of State Health Services based on population projections from the U.S. Census Bureau3. Data for Denton County notifiable conditions was collected from the Texas Department of State Health Services National Electronic Disease Surveillance System (NEDSS)4. This system delivers public health data to both state and local agencies, allowing data sharing and the ability to conduct disease surveillance. -
Arxiv:2101.11990V1 [Physics.Flu-Dyn] 28 Jan 2021 in the Study Reported That All of the Restroom Surfaces Appeared Teria Recovered from Air Samples
Aerosol generation in public restrooms Jesse H. Schreck,1, a) Masoud Jahandar Lashaki,2, b) Javad Hashemi,1, c) Manhar Dhanak,1, d) and Siddhartha Verma1, e) 1)Department of Ocean and Mechanical Engineering, Florida Atlantic University, Boca Raton, FL 33431, USA 2)Department of Civil, Environmental and Geomatics Engineering, Florida Atlantic University, Boca Raton, FL 33431, USA (Dated: 29 January 2021) Aerosolized droplets play a central role in the transmission of various infectious diseases, including Legionnaire’s disease, gastroenteritis-causing norovirus, and most recently COVID-19. Respiratory droplets are known to be the most prominent source of transmission for COVID-19, however, alternative routes may exist given the discovery of small numbers of viable viruses in urine and stool samples. Flushing biomatter can lead to the aerosolization of microorganisms, thus, there is a likelihood that bioaerosols generated in public restrooms may pose a concern for the transmission of COVID-19, especially since these areas are relatively confined, experience heavy foot traffic, and may suffer from inadequate ventilation. To quantify the extent of aerosolization, we measure the size and number of droplets generated by flushing toilets and urinals in a public restroom. The results indicate that the particular designs tested in the study generate a large number of droplets in the size range 0:3mm to 3mm, which can reach heights of at least 1:52m. Covering the toilet reduced aerosol levels but did not eliminate them completely, suggesting that aerosolized droplets escaped through small gaps between the cover and the seat. In addition to consistent increases in aerosol levels immediately after flushing, there was a notable rise in ambient aerosol levels due to the accumulation of droplets from multiple flushes conducted during the tests. -
Intersecting Infections of Public Health Significance Page I Intersecting Infections of Public Health Significance
Intersecting Infections of Public Health Significance Page i Intersecting Infections of Public Health Significance The Epidemiology of HIV, Viral Hepatitis, Sexually Transmitted Diseases, and Tuberculosis in King County 2008 Intersecting Infections of Public Health Significance was supported by a cooperative agreement from the Centers for Disease Control and Prevention Published December 2009 Alternate formats of this report are available upon request Intersecting Infections of Public Health Significance Page ii David Fleming, MD, Director Jeffrey Duchin, MD, Director, Communicable Disease Epidemiology & Immunization Program Matthew Golden, MD, MPH, Director, STD Program Masa Narita, MD, Director, TB Program Robert Wood, MD, Director, HIV/AIDS Program Prepared by: Hanne Thiede, DVM, MPH Elizabeth Barash, MPH Jim Kent, MS Jane Koehler, DVM, MPH Other contributors: Amy Bennett, MPH Richard Burt, PhD Susan Buskin, PhD, MPH Christina Thibault, MPH Roxanne Pieper Kerani, PhD Eyal Oren, MS Shelly McKeirnan, RN, MPH Amy Laurent, MSPH Cover design and formatting by Tanya Hunnell The report is available at www.kingcounty.gov/health/hiv For additional copies of this report contact: HIV/AIDS Epidemiology Program Public Health – Seattle & King County 400 Yesler Way, 3rd Floor Seattle, WA 98104 206-296-4645 Intersecting Infections of Public Health Significance Page iii Table of Contents INDEX OF TABLES AND FIGURES ········································································ vi EXECUTIVE SUMMARY ······················································································