A Preliminary Checklistof Boletales from Brazil And
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<I>Phylloporus
VOLUME 2 DECEMBER 2018 Fungal Systematics and Evolution PAGES 341–359 doi.org/10.3114/fuse.2018.02.10 Phylloporus and Phylloboletellus are no longer alone: Phylloporopsis gen. nov. (Boletaceae), a new smooth-spored lamellate genus to accommodate the American species Phylloporus boletinoides A. Farid1*§, M. Gelardi2*, C. Angelini3,4, A.R. Franck5, F. Costanzo2, L. Kaminsky6, E. Ercole7, T.J. Baroni8, A.L. White1, J.R. Garey1, M.E. Smith6, A. Vizzini7§ 1Herbarium, Department of Cell Biology, Micriobiology and Molecular Biology, University of South Florida, Tampa, Florida 33620, USA 2Via Angelo Custode 4A, I-00061 Anguillara Sabazia, RM, Italy 3Via Cappuccini 78/8, I-33170 Pordenone, Italy 4National Botanical Garden of Santo Domingo, Santo Domingo, Dominican Republic 5Wertheim Conservatory, Department of Biological Sciences, Florida International University, Miami, Florida, 33199, USA 6Department of Plant pathology, University of Florida, Gainesville, Florida 32611, USA 7Department of Life Sciences and Systems Biology, University of Turin, Viale P.A. Mattioli 25, I-10125 Torino, Italy 8Department of Biological Sciences, State University of New York – College at Cortland, Cortland, NY 1304, USA *Authors contributed equally to this manuscript §Corresponding authors: [email protected], [email protected] Key words: Abstract: The monotypic genus Phylloporopsis is described as new to science based on Phylloporus boletinoides. This Boletales species occurs widely in eastern North America and Central America. It is reported for the first time from a neotropical lamellate boletes montane pine woodland in the Dominican Republic. The confirmation of this newly recognised monophyletic genus is molecular phylogeny supported and molecularly confirmed by phylogenetic inference based on multiple loci (ITS, 28S, TEF1-α, and RPB1). -
How Many Fungi Make Sclerotia?
fungal ecology xxx (2014) 1e10 available at www.sciencedirect.com ScienceDirect journal homepage: www.elsevier.com/locate/funeco Short Communication How many fungi make sclerotia? Matthew E. SMITHa,*, Terry W. HENKELb, Jeffrey A. ROLLINSa aUniversity of Florida, Department of Plant Pathology, Gainesville, FL 32611-0680, USA bHumboldt State University of Florida, Department of Biological Sciences, Arcata, CA 95521, USA article info abstract Article history: Most fungi produce some type of durable microscopic structure such as a spore that is Received 25 April 2014 important for dispersal and/or survival under adverse conditions, but many species also Revision received 23 July 2014 produce dense aggregations of tissue called sclerotia. These structures help fungi to survive Accepted 28 July 2014 challenging conditions such as freezing, desiccation, microbial attack, or the absence of a Available online - host. During studies of hypogeous fungi we encountered morphologically distinct sclerotia Corresponding editor: in nature that were not linked with a known fungus. These observations suggested that Dr. Jean Lodge many unrelated fungi with diverse trophic modes may form sclerotia, but that these structures have been overlooked. To identify the phylogenetic affiliations and trophic Keywords: modes of sclerotium-forming fungi, we conducted a literature review and sequenced DNA Chemical defense from fresh sclerotium collections. We found that sclerotium-forming fungi are ecologically Ectomycorrhizal diverse and phylogenetically dispersed among 85 genera in 20 orders of Dikarya, suggesting Plant pathogens that the ability to form sclerotia probably evolved 14 different times in fungi. Saprotrophic ª 2014 Elsevier Ltd and The British Mycological Society. All rights reserved. Sclerotium Fungi are among the most diverse lineages of eukaryotes with features such as a hyphal thallus, non-flagellated cells, and an estimated 5.1 million species (Blackwell, 2011). -
Diversity, Distribution and Morphological Characterization of Wild Macro Fungi from Gajni Forest
Asian Journal of Biology 9(2): 19-32, 2020; Article no.AJOB.55647 ISSN: 2456-7124 Diversity, Distribution and Morphological Characterization of Wild Macro Fungi from Gajni Forest D. R. B. Sonchita1, F. M. Aminuzzaman1*, A. A. Joty1, J. F. Tanni1, M. N. Islam1 and M. Rahaman1 1Department of Plant Pathology, Faculty of Agriculture, Sher-e-Bangla Agricultural University, Sher-e-Bangla Nagar, Dhaka-1207, Bangladesh. Authors’ contributions This work was carried out in collaboration among all authors. Author DRBS collected the samples and conducted the research work. Author FMA designed and supervised the research work, collected the samples, wrote and edited the manuscript. Authors AAJ and MNI collected the samples. Authors JFT and MR managed the literature searches. All authors read and approved the final manuscript. Article Information DOI: 10.9734/AJOB/2020/v9i230084 Editor(s): (1) Dr. P. Dhasarathan, Anna University, India. Reviewers: (1) Blagoy Uzunov, Sofia University “St. Kliment Ohridski”, Bulgaria. (2) Siddhant, Durgesh Nandini Degree College, India. (3) Shengrong Liu, Ningde Normal University, China. Complete Peer review History: http://www.sdiarticle4.com/review-history/55647 Received 20 March 2020 Original Research Article Accepted 27 May 2020 Published 05 June 2020 ABSTRACT Survey on macro fungi was made in Gajni forest, Sherpur, Bangladesh which is located in between 24°18' and 25°18' north latitudes and in between 89°53' and 90°91' east longitudes. It is bounded by Meghalaya state of India on the north, Mymensingh and Jamalpur districts on the south with a wide range of ecosystem. The survey was conducted on July to December, 2018 to identify and preserve wood-rot causal macro fungi for future industrial utilization. -
Amplicon-Based Sequencing of Soil Fungi from Wood Preservative Test Sites
ORIGINAL RESEARCH published: 18 October 2017 doi: 10.3389/fmicb.2017.01997 Amplicon-Based Sequencing of Soil Fungi from Wood Preservative Test Sites Grant T. Kirker 1*, Amy B. Bishell 1, Michelle A. Jusino 2, Jonathan M. Palmer 2, William J. Hickey 3 and Daniel L. Lindner 2 1 FPL, United States Department of Agriculture-Forest Service (USDA-FS), Durability and Wood Protection, Madison, WI, United States, 2 NRS, United States Department of Agriculture-Forest Service (USDA-FS), Center for Forest Mycology Research, Madison, WI, United States, 3 Department of Soil Science, University of Wisconsin-Madison, Madison, WI, United States Soil samples were collected from field sites in two AWPA (American Wood Protection Association) wood decay hazard zones in North America. Two field plots at each site were exposed to differing preservative chemistries via in-ground installations of treated wood stakes for approximately 50 years. The purpose of this study is to characterize soil fungal species and to determine if long term exposure to various wood preservatives impacts soil fungal community composition. Soil fungal communities were compared using amplicon-based DNA sequencing of the internal transcribed spacer 1 (ITS1) region of the rDNA array. Data show that soil fungal community composition differs significantly Edited by: Florence Abram, between the two sites and that long-term exposure to different preservative chemistries National University of Ireland Galway, is correlated with different species composition of soil fungi. However, chemical analyses Ireland using ICP-OES found levels of select residual preservative actives (copper, chromium and Reviewed by: Seung Gu Shin, arsenic) to be similar to naturally occurring levels in unexposed areas. -
9B Taxonomy to Genus
Fungus and Lichen Genera in the NEMF Database Taxonomic hierarchy: phyllum > class (-etes) > order (-ales) > family (-ceae) > genus. Total number of genera in the database: 526 Anamorphic fungi (see p. 4), which are disseminated by propagules not formed from cells where meiosis has occurred, are presently not grouped by class, order, etc. Most propagules can be referred to as "conidia," but some are derived from unspecialized vegetative mycelium. A significant number are correlated with fungal states that produce spores derived from cells where meiosis has, or is assumed to have, occurred. These are, where known, members of the ascomycetes or basidiomycetes. However, in many cases, they are still undescribed, unrecognized or poorly known. (Explanation paraphrased from "Dictionary of the Fungi, 9th Edition.") Principal authority for this taxonomy is the Dictionary of the Fungi and its online database, www.indexfungorum.org. For lichens, see Lecanoromycetes on p. 3. Basidiomycota Aegerita Poria Macrolepiota Grandinia Poronidulus Melanophyllum Agaricomycetes Hyphoderma Postia Amanitaceae Cantharellales Meripilaceae Pycnoporellus Amanita Cantharellaceae Abortiporus Skeletocutis Bolbitiaceae Cantharellus Antrodia Trichaptum Agrocybe Craterellus Grifola Tyromyces Bolbitius Clavulinaceae Meripilus Sistotremataceae Conocybe Clavulina Physisporinus Trechispora Hebeloma Hydnaceae Meruliaceae Sparassidaceae Panaeolina Hydnum Climacodon Sparassis Clavariaceae Polyporales Gloeoporus Steccherinaceae Clavaria Albatrellaceae Hyphodermopsis Antrodiella -
AR TICLE New Sequestrate Fungi from Guyana: Jimtrappea Guyanensis
IMA FUNGUS · 6(2): 297–317 (2015) doi:10.5598/imafungus.2015.06.02.03 New sequestrate fungi from Guyana: Jimtrappea guyanensis gen. sp. nov., ARTICLE Castellanea pakaraimophila gen. sp. nov., and Costatisporus cyanescens gen. sp. nov. (Boletaceae, Boletales) Matthew E. Smith1, Kevin R. Amses2, Todd F. Elliott3, Keisuke Obase1, M. Catherine Aime4, and Terry W. Henkel2 1Department of Plant Pathology, University of Florida, Gainesville, FL 32611, USA 2Department of Biological Sciences, Humboldt State University, Arcata, CA 95521, USA; corresponding author email: Terry.Henkel@humboldt. edu 3Department of Integrative Studies, Warren Wilson College, Asheville, NC 28815, USA 4Department of Botany & Plant Pathology, Purdue University, West Lafayette, IN 47907, USA Abstract: Jimtrappea guyanensis gen. sp. nov., Castellanea pakaraimophila gen. sp. nov., and Costatisporus Key words: cyanescens gen. sp. nov. are described as new to science. These sequestrate, hypogeous fungi were collected Boletineae in Guyana under closed canopy tropical forests in association with ectomycorrhizal (ECM) host tree genera Caesalpinioideae Dicymbe (Fabaceae subfam. Caesalpinioideae), Aldina (Fabaceae subfam. Papilionoideae), and Pakaraimaea Dipterocarpaceae (Dipterocarpaceae). Molecular data place these fungi in Boletaceae (Boletales, Agaricomycetes, Basidiomycota) ectomycorrhizal fungi and inform their relationships to other known epigeous and sequestrate taxa within that family. Macro- and gasteroid fungi micromorphological characters, habitat, and multi-locus DNA sequence data are provided for each new taxon. Guiana Shield Unique morphological features and a molecular phylogenetic analysis of 185 taxa across the order Boletales justify the recognition of the three new genera. Article info: Submitted: 31 May 2015; Accepted: 19 September 2015; Published: 2 October 2015. INTRODUCTION 2010, Gube & Dorfelt 2012, Lebel & Syme 2012, Ge & Smith 2013). -
Universidad De San Carlos De Guatemala Facultad De Ciencias Químicas Y Farmacia
UNIVERSIDAD DE SAN CARLOS DE GUATEMALA FACULTAD DE CIENCIAS QUÍMICAS Y FARMACIA Descripción microscópica y determinación de 8 especies del orden Boletales recolectadas como primer registro en Guatemala LYS MARIELA HERNÁNDEZ MONTUFAR QUÍMICA BIÓLOGA GUATEMALA, AGOSTO 2013 UNIVERSIDAD DE SAN CARLOS DE GUATEMALA FACULTAD DE CIENCIAS QUÍMICAS Y FARMACIA Descripción microscópica y determinación de 8 especies del orden Boletales recolectadas como primer registro en Guatemala Informe de Tesis Presentado por LYS MARIELA HERNÁNDEZ MONTUFAR Para optar al título de QUÍMICA BIÓLOGA GUATEMALA, AGOSTO 2013 JUNTA DIRECTIVA Oscar Cóbar Pinto, Ph.D. Decano Lic. Pablo Ernesto Oliva Soto, M.A. Secretario Licda. Liliana Vides de Urizar Vocal I Dr. Sergio Alejandro Melgar Valladares Vocal II Lic. José Rodrigo Vargas Vocal III Br. Fayver Manuel de león Mayorga Vocal IV Br. Maidy Graciela Córdova Audón Vocal V ACTO QUE DEDICO A DIOS: Por darme fe, salud, fortaleza, sabiduría y sobre todo una maravillosa familia que me ayudó a alcanzar esta meta. A MIS PADRES: Marco Antonio Hernández y Sandra Montufar, quienes con su esfuerzo, sacrificio, amor y apoyo incondicional me han acompañado en todo momento, sin ustedes no hubiera alcanzado esta meta. Gracias por todo. A MI ESPOSO: Julio Matías, por el amor y apoyo incondicional, porque siempre me has animado a seguir adelante y a no darme por vencida, gracias por todo,te amo. A MI HIJO: Sergio Antonio, porque eres mi motivación para seguir adelante y ser un buen ejemplo, gracias por el amor y alegrías que me das a cada instante. Te amo. A MIS HERMANAS: Patty y Kari, gracias por todos los buenos momentos que hemos compartido, por el cariño, paciencia y apoyo que me han brindado siempre, las quiero mucho y sin ustedes no estaría aquí hoy. -
MUSHROOMS of the OTTAWA NATIONAL FOREST Compiled By
MUSHROOMS OF THE OTTAWA NATIONAL FOREST Compiled by Dana L. Richter, School of Forest Resources and Environmental Science, Michigan Technological University, Houghton, MI for Ottawa National Forest, Ironwood, MI March, 2011 Introduction There are many thousands of fungi in the Ottawa National Forest filling every possible niche imaginable. A remarkable feature of the fungi is that they are ubiquitous! The mushroom is the large spore-producing structure made by certain fungi. Only a relatively small number of all the fungi in the Ottawa forest ecosystem make mushrooms. Some are distinctive and easily identifiable, while others are cryptic and require microscopic and chemical analyses to accurately name. This is a list of some of the most common and obvious mushrooms that can be found in the Ottawa National Forest, including a few that are uncommon or relatively rare. The mushrooms considered here are within the phyla Ascomycetes – the morel and cup fungi, and Basidiomycetes – the toadstool and shelf-like fungi. There are perhaps 2000 to 3000 mushrooms in the Ottawa, and this is simply a guess, since many species have yet to be discovered or named. This number is based on lists of fungi compiled in areas such as the Huron Mountains of northern Michigan (Richter 2008) and in the state of Wisconsin (Parker 2006). The list contains 227 species from several authoritative sources and from the author’s experience teaching, studying and collecting mushrooms in the northern Great Lakes States for the past thirty years. Although comments on edibility of certain species are given, the author neither endorses nor encourages the eating of wild mushrooms except with extreme caution and with the awareness that some mushrooms may cause life-threatening illness or even death. -
Sequencing Abstracts Msa Annual Meeting Berkeley, California 7-11 August 2016
M S A 2 0 1 6 SEQUENCING ABSTRACTS MSA ANNUAL MEETING BERKELEY, CALIFORNIA 7-11 AUGUST 2016 MSA Special Addresses Presidential Address Kerry O’Donnell MSA President 2015–2016 Who do you love? Karling Lecture Arturo Casadevall Johns Hopkins Bloomberg School of Public Health Thoughts on virulence, melanin and the rise of mammals Workshops Nomenclature UNITE Student Workshop on Professional Development Abstracts for Symposia, Contributed formats for downloading and using locally or in a Talks, and Poster Sessions arranged by range of applications (e.g. QIIME, Mothur, SCATA). 4. Analysis tools - UNITE provides variety of analysis last name of primary author. Presenting tools including, for example, massBLASTer for author in *bold. blasting hundreds of sequences in one batch, ITSx for detecting and extracting ITS1 and ITS2 regions of ITS 1. UNITE - Unified system for the DNA based sequences from environmental communities, or fungal species linked to the classification ATOSH for assigning your unknown sequences to *Abarenkov, Kessy (1), Kõljalg, Urmas (1,2), SHs. 5. Custom search functions and unique views to Nilsson, R. Henrik (3), Taylor, Andy F. S. (4), fungal barcode sequences - these include extended Larsson, Karl-Hnerik (5), UNITE Community (6) search filters (e.g. source, locality, habitat, traits) for 1.Natural History Museum, University of Tartu, sequences and SHs, interactive maps and graphs, and Vanemuise 46, Tartu 51014; 2.Institute of Ecology views to the largest unidentified sequence clusters and Earth Sciences, University of Tartu, Lai 40, Tartu formed by sequences from multiple independent 51005, Estonia; 3.Department of Biological and ecological studies, and for which no metadata Environmental Sciences, University of Gothenburg, currently exists. -
Notes, Outline and Divergence Times of Basidiomycota
Fungal Diversity (2019) 99:105–367 https://doi.org/10.1007/s13225-019-00435-4 (0123456789().,-volV)(0123456789().,- volV) Notes, outline and divergence times of Basidiomycota 1,2,3 1,4 3 5 5 Mao-Qiang He • Rui-Lin Zhao • Kevin D. Hyde • Dominik Begerow • Martin Kemler • 6 7 8,9 10 11 Andrey Yurkov • Eric H. C. McKenzie • Olivier Raspe´ • Makoto Kakishima • Santiago Sa´nchez-Ramı´rez • 12 13 14 15 16 Else C. Vellinga • Roy Halling • Viktor Papp • Ivan V. Zmitrovich • Bart Buyck • 8,9 3 17 18 1 Damien Ertz • Nalin N. Wijayawardene • Bao-Kai Cui • Nathan Schoutteten • Xin-Zhan Liu • 19 1 1,3 1 1 1 Tai-Hui Li • Yi-Jian Yao • Xin-Yu Zhu • An-Qi Liu • Guo-Jie Li • Ming-Zhe Zhang • 1 1 20 21,22 23 Zhi-Lin Ling • Bin Cao • Vladimı´r Antonı´n • Teun Boekhout • Bianca Denise Barbosa da Silva • 18 24 25 26 27 Eske De Crop • Cony Decock • Ba´lint Dima • Arun Kumar Dutta • Jack W. Fell • 28 29 30 31 Jo´ zsef Geml • Masoomeh Ghobad-Nejhad • Admir J. Giachini • Tatiana B. Gibertoni • 32 33,34 17 35 Sergio P. Gorjo´ n • Danny Haelewaters • Shuang-Hui He • Brendan P. Hodkinson • 36 37 38 39 40,41 Egon Horak • Tamotsu Hoshino • Alfredo Justo • Young Woon Lim • Nelson Menolli Jr. • 42 43,44 45 46 47 Armin Mesˇic´ • Jean-Marc Moncalvo • Gregory M. Mueller • La´szlo´ G. Nagy • R. Henrik Nilsson • 48 48 49 2 Machiel Noordeloos • Jorinde Nuytinck • Takamichi Orihara • Cheewangkoon Ratchadawan • 50,51 52 53 Mario Rajchenberg • Alexandre G. -
Patterns of Vegetative Growth and Gene Flow in Rhizopogon Vinicolor and R
Molecular Ecology (2005) 14,2259-2268 doi: 10.111 1/j.1365-294X.2005.02547.x Patterns of vegetative growth and gene flow in Rhizopogon vinicolor and R. vesiculosus (Boletales, Basidiomycota) ANNETTE M. KRETZER,"SUSIE DUNHAM,+ RANDY MOLINAS and JOSEPH W. SPATAFORAt *SUNYCollege of Environmental Science and Forest y, Faculty of Environmental and Forest Biology, 1 Forest y Drive, Syracuse, NY 13210, toregon State University, Department of Botany and Plant Pathology, 2082 Cordley Hall, Corvallis, OR 97331, SUSDA Forest Service; 620 SW Main St., Suite 400, Portland, OR 97205 Abstract We have collected sporocarps and tuberculate ectomycorrhizae of both Rhizopogon vini- color and Rhizopogon vesiculosus from three 50 x 100 m plots located at Mary's Peak in the Oregon Coast Range (USA); linear map distances between plots ranged from c. 1km to c. 5.5 km. Six and seven previously developed microsatellite markers were used to map the approximate size and distribution of R. vinicolor and R. vesiculosus genets, respectively. Genetic structure within plots was analysed using spatial autocorrelation analyses. No sig- nificant clustering of similar genotypes was detected in either species when redundant samples from the same genets were culled from the data sets. In contrast, strong clustering was detected in R. vesiculosus when all samples were analysed, but not in R. vinicolor. These results demonstrate that isolation by distance does not occur in either species at the intraplot sampling scale and that clonal propagation (vegetative growth) is significantly more prevalent in R. vesiculosus than in R. vinicolor. Significant genetic differentiation was detected between some of the plots and appeared greater in the more clonal species R. -
Duke University Dissertation Template
Systematics, Phylogeography and Ecology of Elaphomycetaceae by Hannah Theresa Reynolds Department of Biology Duke University Date:_______________________ Approved: ___________________________ Rytas Vilgalys, Supervisor ___________________________ Marc Cubeta ___________________________ Katia Koelle ___________________________ François Lutzoni ___________________________ Paul Manos Dissertation submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy in the Department of Biology in the Graduate School of Duke University 2011 iv ABSTRACTU Systematics, Phylogeography and Ecology of Elaphomycetaceae by Hannah Theresa Reynolds Department of Biology Duke University Date:_______________________ Approved: ___________________________ Rytas Vilgalys, Supervisor ___________________________ Marc Cubeta ___________________________ Katia Koelle ___________________________ François Lutzoni ___________________________ Paul Manos An abstract of a dissertation submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy in the Department of Biology in the Graduate School of Duke University 2011 Copyright by Hannah Theresa Reynolds 2011 Abstract This dissertation is an investigation of the systematics, phylogeography, and ecology of a globally distributed fungal family, the Elaphomycetaceae. In Chapter 1, we assess the literature on fungal phylogeography, reviewing large-scale phylogenetics studies and performing a meta-data analysis of fungal population genetics. In particular, we examined