A Productive Year for Describing New Crayfish Species !
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Evolutionary History of Inversions in the Direction of Architecture-Driven
bioRxiv preprint doi: https://doi.org/10.1101/2020.05.09.085712; this version posted May 10, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC 4.0 International license. Evolutionary history of inversions in the direction of architecture- driven mutational pressures in crustacean mitochondrial genomes Dong Zhang1,2, Hong Zou1, Jin Zhang3, Gui-Tang Wang1,2*, Ivan Jakovlić3* 1 Key Laboratory of Aquaculture Disease Control, Ministry of Agriculture, and State Key Laboratory of Freshwater Ecology and Biotechnology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, China. 2 University of Chinese Academy of Sciences, Beijing 100049, China 3 Bio-Transduction Lab, Wuhan 430075, China * Corresponding authors Short title: Evolutionary history of ORI events in crustaceans Abbreviations: CR: control region, RO: replication of origin, ROI: inversion of the replication of origin, D-I skew: double-inverted skew, LBA: long-branch attraction bioRxiv preprint doi: https://doi.org/10.1101/2020.05.09.085712; this version posted May 10, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC 4.0 International license. Abstract Inversions of the origin of replication (ORI) of mitochondrial genomes produce asymmetrical mutational pressures that can cause artefactual clustering in phylogenetic analyses. It is therefore an absolute prerequisite for all molecular evolution studies that use mitochondrial data to account for ORI events in the evolutionary history of their dataset. -
Acute and Sub-Chronic Effects of Copper on Survival, Respiratory
www.nature.com/scientificreports OPEN Acute and sub‑chronic efects of copper on survival, respiratory metabolism, and metal accumulation in Cambaroides dauricus Jie Bao, Yuenan Xing, Chengcheng Feng, Shiyu Kou, Hongbo Jiang* & Xiaodong Li* Trace metal contamination in the aquatic ecosystem occurs worldwide: although copper is an essential trace metal, it is considered as a pollutant at certain levels in China. Freshwater crayfsh Cambaroides dauricus is a commercially important wild species in northeastern China, in which is an important heavy industry area. The population of C. dauricus was decreasing sharply due to the environmental pollution and human intervention over the past 20 years. However, nothing is known regarding the responses of this species to trace metal toxicants. This study aimed to determine the acute and chronic toxicity of Cu and its toxicological efects on respiratory metabolism, as well as Cu accumulation in C. dauricus. The acute (96 h) median lethal concentration (LC50) value of 32.5 mg/L was detected in C. dauricus. Then, acute (96 h; 8.24, 16.48 mg/L) and sub‑chronic (14 days; 2.06, 4.12 mg/L) exposure in Cu was investigated by estimating the oxygen consumption rate, ammonium excretion rate, and Cu accumulation. Both acute and sub-chronic Cu exposure induced an inhibition of the oxygen consumption rate and ammonium excretion rate, and thereby, an increased O:N ratio. The shift in O:N ratio indicated a metabolic substrate shift towards lipid and carbohydrate metabolism under Cu stress. Cu accumulation in the hepatopancreas and muscles throughout the study was found to be time-dependent and concentration-dependent. -
Synopsis of Freshwater Crayfish Diseases and Commensal Organisms Brett .F Edgerton James Cook University, [email protected]
University of Nebraska - Lincoln DigitalCommons@University of Nebraska - Lincoln Faculty Publications from the Harold W. Manter Parasitology, Harold W. Manter Laboratory of Laboratory of Parasitology 3-2002 Synopsis of Freshwater Crayfish Diseases and Commensal Organisms Brett .F Edgerton James Cook University, [email protected] Louis H. Evans Curtin University of Technology Frances J. Stephens Curtin University of Technology Robin M. Overstreet Gulf Coast Research Laboratory, [email protected] Follow this and additional works at: https://digitalcommons.unl.edu/parasitologyfacpubs Part of the Aquaculture and Fisheries Commons, and the Parasitology Commons Edgerton, Brett .;F Evans, Louis H.; Stephens, Frances J.; and Overstreet, Robin M., "Synopsis of Freshwater Crayfish Diseases and Commensal Organisms" (2002). Faculty Publications from the Harold W. Manter Laboratory of Parasitology. 884. https://digitalcommons.unl.edu/parasitologyfacpubs/884 This Article is brought to you for free and open access by the Parasitology, Harold W. Manter Laboratory of at DigitalCommons@University of Nebraska - Lincoln. It has been accepted for inclusion in Faculty Publications from the Harold W. Manter Laboratory of Parasitology by an authorized administrator of DigitalCommons@University of Nebraska - Lincoln. Published in Aquaculture 206:1–2 (March 2002), pp. 57–135; doi: 10.1016/S0044-8486(01)00865-1 Copyright © 2002 Elsevier Science. Creative Commons Attribution Non-Commercial No Deriva- tives License. Accepted October 18, 2001; published online November 30, 2001. Synopsis of Freshwater Crayfish Diseases and Commensal Organisms Brett F. Edgerton,1 Louis H. Evans,2 Frances J. Stephens,2 and Robin M. Overstreet3 1. Department of Microbiology and Immunology, James Cook University, Townsville, QLD 4810, Australia 2. -
Lake Tahoe Region Aquatic Invasive Species Management Plan CALIFORNIA ‐ NEVADA
Lake Tahoe Region Aquatic Invasive Species Management Plan CALIFORNIA ‐ NEVADA DRAFT September 2009 Pending approval by the Aquatic Nuisance Species Task Force This Aquatic Invasive Species Management Plan is part of a multi-stakeholder collaborative effort to minimize the deleterious effects of nuisance and invasive aquatic species in the Lake Tahoe Region. This specific product is authorized pursuant to Section 108 of Division C of the Consolidated Appropriations Act of 2005, Public Law 108-447 and an interagency agreement between the U.S. Army Corps of Engineers and the California Tahoe Conservancy. This product was prepared by: Suggested citation: USACE. 2009. Lake Tahoe Region Aquatic Invasive Species Management Plan, California - Nevada. 84 pp + Appendices. Cover photo credits: Lake Tahoe shoreline, Toni Pennington (Tetra Tech, Inc.); curlyleaf pondweed, Steve Wells (PSU); Asian clams, Brant Allen (UCD); bullfrog (USGS), zebra mussels (USGS); bluegill and largemouth bass (USACE) ii i Table of Contents Acknowledgements................................................................................................................ iii Acronyms ............................................................................................................................... iv Glossary.................................................................................................................................. vi Executive Summary ........................................................................................................... -
THE CHROMOSOMES of the CRAYFISH, CAMBAROIDES JAPONICUS (DE HAAN) (With 4 Figures in Text)
Title THE CHROMOSOMES OF THE CRAYFISH, CAMBAROIDES JAPONICUS (DE HAAN) (With 4 Figures in Text) Author(s) NIIYAMA, Hidejiro Citation 北海道帝國大學理學部紀要, 3(2), 41-53 Issue Date 1934-09 Doc URL http://hdl.handle.net/2115/26964 Type bulletin (article) File Information 3(2)_P41-53.pdf Instructions for use Hokkaido University Collection of Scholarly and Academic Papers : HUSCAP THE CHROMOSOMES OF THE CRAYFISH, CAMBAROIDES JAPONICUS (DE HAAN)l) BY Hidejiro NUYAMA (With 4. Figures in Text) As is well known, the chromosome of the decapod Crustacea is very conspicuous for its large number, probably being the largest so far discovered in the animal kingdom (see HARVEY'S list, '16, '20). StilI further, it exhibits different and unique characteristics when compared with other groups of Crustacea e. g., Copepoda (HACKER '08; BRAUN, '09; MATSCHEK, '09; '10, AMMA, '11; HEBERER, '32), Ostracoda (SCHLEIP, '09; SCHMALZ, '11, '12), Cladocera (TAYLOR, '14; CHAMBERS, '13) Isopoda (CARNOY, '85; KOMAI, '20, SUGIYAMA, '32), not only in the number but also in the shape. Though a number of memoirs have appeared on the cytology of the Decapoda, many important problems as to the chromosome morphology still remain obscure in this group of animals. The present paper embodies the results of a study on the chromosome history in the crayfish, Cambaroides japonicus, with the purpose of determining the chromosome number and discovering the sex chromosome, if possible. The work was carried out under the kind guidance of Professor OGUMA, to whom the author wishes to express his hearty thanks. The author is also greatly indebted to Mr. -
Pacifastacus Leniusculus) Ecological Risk Screening Summary
U.S. Fish and Wildlife Service Signal Crayfish (Pacifastacus leniusculus) Ecological Risk Screening Summary U.S. Fish and Wildlife Service, February 2011 Revised, June 2015 Photo: National Park Service 1 Native Range, and Status in the United States Native Range From GISD (2005): “Endemic to western North America between the Pacific Ocean and the Rocky Mountains. Occurs from British Columbia in the north, central California in the south, and Utah in the east.” Status in the United States From Schuster et al. (2010): “California - Introduced, Idaho, Nevada - Introduced, Oregon, Utah - Introduced, Washington” Means of Introductions in the United States From Fofonoff et al. (2003): “Pacifastacus leniusculus was introduced to various California watersheds, possibly as early as 1898, in San Francisco. An official transplant was made in 1912 to hatcheries in Santa Cruz County, and in later years, they were introduced to the Sacramento-San Joaquin watershed. They were present in the Delta by 1959, and are now abundant (Riegel 1959). Other California locations include the Monterey Bay watershed, and upper reaches of the Sacramento watershed in the Sierras (USGS Nonindigenous Aquatic Species Program 2010). Two records near the coast were from the Carmel River and the Little Sur Rivers, south of Monterey Bay, two and one miles from the ocean, respectively (Riegel 1959).” “In 2002, one specimen was caught in the Buskin River on Kodiak Island, Alaska (USGS Nonindigenous Aquatic Species Program 2011). This could have been a bait release.” 2 Biology -
Synopsis of the Families and Genera of Crayfishes (Crustacea: Decapoda)
Synopsis of the Families and Genera of Crayfishes (Crustacea: Decapoda) HORTON H, HOBBS, JR. m SMITHSONIAN CONTRIBUTIONS TO ZOOLOGY • NUMBER 164 SERIAL PUBLICATIONS OF THE SMITHSONIAN INSTITUTION The emphasis upon publications as a means of diffusing knowledge was expressed by the first Secretary of the Smithsonian Institution. In his formal plan for the Insti- tution, Joseph Henry articulated a program that included the following statement: "It is proposed to publish a series of reports, giving an account of the new discoveries in science, and of the changes made from year to year in all branches of knowledge." This keynote of basic research has been adhered to over the years in the issuance of thousands of titles in serial publications under the Smithsonian imprint, com- mencing with Smithsonian Contributions to Knowledge in 1848 and continuing with the following active series: Smithsonian Annals of Flight Smithsonian Contributions to Anthropology Smithsonian Contributions to Astrophysics Smithsonian Contributions to Botany Smithsonian Contributions to the Earth Sciences Smithsonian Contributions to Paleobiology Smithsonian Contributions to Zoology Smithsonian Studies in History and Technology In these series, the Institution publishes original articles and monographs dealing with the research and collections of its several museums and offices and of professional colleagues at other institutions of learning. These papers report newly acquired facts, synoptic interpretations of data, or original theory in specialized fields. These pub- lications are distributed by mailing lists to libraries, laboratories, and other interested institutions and specialists throughout the world. Individual copies may be obtained from the Smithsonian Institution Press as long as stocks are available. S. DILLON RIPLEY Secretary Smithsonian Institution SMITHSONIAN CONTRIBUTIONS TO ZOOLOGY • NUMBER 164 Synopsis of the Families and Genera of Crayfishes (Crustacea: Decapoda) Horton H. -
Phylogeography and Population Genetics of a Headwater-Stream Adapted Crayfish
Phylogeography and population genetics of a headwater-stream adapted crayfish, Cambarus pristinus (Decapoda: Cambaridae), from the Cumberland Plateau in Tennessee A thesis Presented to The College of Graduate Studies Austin Peay State University In Partial Fulfillment Of the Requirements for the Degree Master of Science in Biology Brooke A. Grubb December, 2019 Statement of Permission to Use In presenting this thesis in partial fulfillment of the requirements for the Master of Science in Biology at Austin Peay State University, I agree that the library shall make it available to borrowers under the rules of the library. Brief quotations from this field study are allowable without special permission, provided that accurate acknowledgement of the source is made. Permissions for extensive quotations or reproduction of this field study may be granted by my major professor, or in his/her absence, by the Head of the Interlibrary Services when, in the opinion of either, the proposed use of the material is for scholarly purposes. Any copying or use of the material in this thesis for financial gain shall not be allowed without my written permission. Brooke A. Grubb Date: _____________________________ ___________________ For Rose Mier She introduced me to the wonderful world of crayfish. ACKNOWLEDGMENTS First, I want to thank Dr. Rebecca Blanton Johansen for all her help, guidance, and feedback during my master’s work. Without Rebecca focusing my enthusiasm, I likely would have followed every ‘shiny object’ and my master’s work would’ve been a much longer process. I also want to thank her for all the invaluable advice related to pursuing a PhD and being available to answer any and all questions I might have had and thank her for allowing me to pursue my Ph.D. -
Feeding Behaviour of the Japanese Crayfish Cambaroides Japonicus (Decapoda, ASTACOIDEA)In a Stream in Hokkaido, Japan
Fisheries Science 61(4), 720-721 (1995) Short Paper Feeding Behaviour of the Japanese Crayfish Cambaroides japonicus (Decapoda, ASTACOIDEA)in a Stream in Hokkaido, Japan Tadashi Kawai,*1 Tatsuo Hamano,*2 and Shuhei Matsuura*3 *1Hokkaido Central Fisheries Experimental Station , Hamanaka, Yoichi, Hokkaido 046, Japan *2National Fisheries University , Yoshimi, Shimonoseki 759-65, Japan *3Faculty of Agriculture , Kyushu University, Hakozaki, Higashi, Fukuoka 812, Japan (Received July 1, 1994) Key words: Japanese crayfish, Cambaroides japonicus, food habits, stomach contents, detritus The Japanese crayfish Cambaroides japonicus lives in degrees: 0, 0.3, 0.6, and 1. Zero degree designates empty streams and lakes of Hokkaido, Aomori, Akita,1) and and 1 degree for fully extended stomachs. Data are sum Iwate Prefectures, in northern Japan. There are few eco marrized for each season i.e., Spring (March-May), Sum logical studies of this animal, although it is rare and a pro mer (June-August), Autumn (September-November), Win tected species. Futhermore, this species is edible2) and ter (December-February). reaches up to 70mm in body length.3) The study area is a Thirteen males and 12 females, mean 15.8 mm (range stream in Atsuta, Hokkaido. The stream has tributaries 9.4-21.3 mm) POCL, collected on 10 August, 1992 were and is about 1 km long, maximum width of 1m and maxi kept in an aquarium at 20•Ž for seven days without food. mum depth of 5 cm. Crayfish were collected monthly from These individuals with empty stomachs were released into 1990 to 1992, using a 1•~1 m quadrate (25 m2 in total) by the stream on 16 August and their feeding behavior was ob hand. -
Crayfish News Volume 41 Issue 2: Page 1 Dear IAA Members Dauricus
Summer Issue July 2019 Volume 41, Issue 2 p-ISSN: 1023-8174 (print) e-ISSN: 2150-9239 (online) Inside this issue Cover Story 1 President’s Corner 2 Meeting 3 announcements Short articles 5 Big Brother is watching - perhaps thankfully in 5 this case? A Record-sized Barbicambarus 6 cornutus Antique specimen of the Japanese crayfish 7 Cambaroides Japonicus Figure 1. Male specimen of Austropotamobius bihariensis. Literature of Interest 9 to Astacologists Recently, a new species of Austropotamobius were described as a new species of crayfish, was described in Europe. How could this named Austropotamobius bihariensis, after the species have remained hidden for such a long region of Biharia where the species is endemic. IAA online time, in a high research-activity area like The diagnostic morphological features are the Europe? lack of denticulation on the lower edge of the The highly divergent populations of the new antennal scale, a significantly shorter bell- crayfish species found in the Apuseni shaped rostrum, and fewer tubercles on the Mountains, Romania, were estimated to have palms of the chelae than its relatives split 15 million years ago from the Dinarides (Pârvulescu, 2019). and evolved in isolation due to the tectonic Historically, the populations of A. bihariensis north-eastern movement of the Tisza-Dacia were ascribed as A. torrentium, with no mega-unit (including the Apuseni Mountains) consideration that they might be different through the Pannonian Basin during the subspecies based on morphology (e.g., Băcescu, Miocene (Pârvulescu et al., 2019). Supported by 1967, Holdich et al., 2006). These populations morphological evidence, these populations (Continued on page5 ) Crayfish News Volume 41 Issue 2: Page 1 Dear IAA members dauricus. -
Decapod Crustacean Phylogenetics
CRUSTACEAN ISSUES ] 3 II %. m Decapod Crustacean Phylogenetics edited by Joel W. Martin, Keith A. Crandall, and Darryl L. Felder £\ CRC Press J Taylor & Francis Group Decapod Crustacean Phylogenetics Edited by Joel W. Martin Natural History Museum of L. A. County Los Angeles, California, U.S.A. KeithA.Crandall Brigham Young University Provo,Utah,U.S.A. Darryl L. Felder University of Louisiana Lafayette, Louisiana, U. S. A. CRC Press is an imprint of the Taylor & Francis Croup, an informa business CRC Press Taylor & Francis Group 6000 Broken Sound Parkway NW, Suite 300 Boca Raton, Fl. 33487 2742 <r) 2009 by Taylor & Francis Group, I.I.G CRC Press is an imprint of 'Taylor & Francis Group, an In forma business No claim to original U.S. Government works Printed in the United States of America on acid-free paper 109 8765 43 21 International Standard Book Number-13: 978-1-4200-9258-5 (Hardcover) Ibis book contains information obtained from authentic and highly regarded sources. Reasonable efforts have been made to publish reliable data and information, but the author and publisher cannot assume responsibility for the valid ity of all materials or the consequences of their use. The authors and publishers have attempted to trace the copyright holders of all material reproduced in this publication and apologize to copyright holders if permission to publish in this form has not been obtained. If any copyright material has not been acknowledged please write and let us know so we may rectify in any future reprint. Except as permitted under U.S. Copyright Faw, no part of this book maybe reprinted, reproduced, transmitted, or uti lized in any form by any electronic, mechanical, or other means, now known or hereafter invented, including photocopy ing, microfilming, and recording, or in any information storage or retrieval system, without written permission from the publishers. -
A Dictionary of Non-Scientific Names of Freshwater Crayfishes (Astacoidea and Parastacoidea), Including Other Words and Phrases Incorporating Crayfish Names
£\ A Dictionary of Non-Scientific Names of Freshwater Crayfishes (Astacoidea and Parastacoidea), Including Other Words and Phrases Incorporating Crayfish Names V5 C.W. HART, JR. SWF- SMITHSONIAN CONTRIBUTIONS TO ANTHROPOLOGY • NUMBER 38 SERIES PUBLICATIONS OF THE SMITHSONIAN INSTITUTION Emphasis upon publication as a means of "diffusing knowledge" was expressed by the first Secretary of the Smithsonian. In his formal plan for the institution, Joseph Henry outlined a program that included the following statement: "It is proposed to publish a series of reports, giving an account of the new discoveries in science, and of the changes made from year to year in all branches of knowledge." This theme of basic research has been adhered to through the years by thousands of titles issued in series publications under the Smithsonian imprint, commencing with Smithsonian Contributions to Knowledge in 1848 and continuing with the following active series: Smithsonian Contributions to Anthropology Smithsonian Contributions to Botany Smithsonian Contributions to the Earth Sciences Smithsonian Contributions to the Marine Sciences Smithsonian Contributions to Paleobiology Smithsonian Contributions to Zoology Smithsonian Folklife Studies Smithsonian Studies in Air and Space Smithsonian Studies in History and Technology In these series, the Institution publishes small papers and full-scale monographs that report the research and collections of its various museums and bureaux or of professional colleagues in the world of science and scholarship. The publications are distributed by mailing lists to libraries, universities, and similar institutions throughout the world. Papers or monographs submitted for series publication are received by the Smithsonian Institution Press, subject to its own review for format and style, only through departments of the various Smithsonian museums or bureaux, where the manuscripts are given substantive review.