Authors: Pallavi Subhraveti Ron Caspi Quang Ong Peter D Karp An online version of this diagram is available at BioCyc.org. Biosynthetic pathways are positioned in the left of the cytoplasm, degradative pathways on the right, and reactions not assigned to any pathway are in the far right of the cytoplasm. Transporters and membrane proteins are shown on the membrane. Ingrid Keseler Periplasmic (where appropriate) and extracellular reactions and proteins may also be shown. Pathways are colored according to their cellular function. Gcf_001570945Cyc: Janibacter anophelis NBRC 107843 Cellular Overview Connections between pathways are omitted for legibility. Anamika Kothari D-ala gly glycine betaine ferric gly dicitrate D-gluconate

RS11735 RS12285 FecE RS03635

glycine betaine ferric D-gluconate gly gly dicitrate D-ala

Amino Acid Biosynthesis Amino Acid Degradation tRNA processing Macromolecule Modification undecaprenyl- a (2R)-2-hydroxy α 2251 (3R,5S)-3- an NDP- - 3-phospho- guanosine long chain superpathway of L- L-valine degradation I a purine a ferrocytochrome a ferrocytochrome uroporphyrinogen-III acetyl-CoA (R)-citramalate L-lysine biosynthesis I diphospho-N- even numbered palmitoyl-CoA stearoyl-CoA D-glucose D-glycerate cob(I)yrinate in 23S rRNA hydroxy-1- met L-histidine biosynthesis superpathway of branched chain amino acid biosynthesis L-arginine biosynthesis II (acetyl cycle) L-arginine biosynthesis I (via L-ornithine) superpathway of L- Cell Structure Biosynthesis a polycistronic L-isoleucine degradation I L-histidine degradation I L-tryptophan L-aspartate ribonucleoside adenosylcobinamide b b ATP polyphosphate dATP ATP isoleucine biosynthesis I 5 5 glucosyl-3- a,c-diamide uroporphyrinogen-III isopropylmalate degradation I acetylmuramoyl- UDP-N-acetyl- straight chain stearoyl-CoA stearoyl-CoA acetyl-CoA carboxylase 23S rRNA polyphosphate pyrroline-5- N-acetylglutamate L-tryptophan biosynthesis threonine biosynthesis tRNA precursor degradation I 5'-triphosphate pyrophosphohydrolase: L-alanyl-γ-D- α-D-glucosamine adenosylcobinamide 2,3,4-saturated 9-desaturase: 9-desaturase: phosphoglycerate cob(I)yrinic acid C-methyltransferase: biotin carboxyl carrier (guanosine(2251) kinase 2: carboxylatepyrroline-5- synthase: isomerase: sulfate N-acetylglutamyl- val (via anthranilate) long-chain fatty oxaloacetate PRPP pyruvate asp Glu peptidoglycan biosynthesis I (meso-diaminopimelate containing) glutamyl-L-lysyl- undecaprenyldiphospho- kinase/ fatty acid synthase: a,c-diamide JAN01S_RS01015 protein subunit: -2'-O)- JAN01S_RS05580 JAN01S_RS05150 JAN01S_RS01350 adenylyltransferase: thr phosphate oxaloacetate ile his acid--CoA ligase: JAN01S_RS07625 JAN01S_RS07625 carboxylate JAN01S_RS11885 aspartate asp muramoylpentapeptide beta-N- NTP aspartate kinase: gln chorismate aspartate branched-chain histidine trp D-alanyl-D-alanine adenosylcobinamide JAN01S_RS15830 adenosyltransferase: bifunctional JAN01S_RS12215 methyltransferase reductase: isopropylmalate JAN01S_RS07685 aminotransferase: ATP acetolactate branched-chain aspartate ditrans,octacis- JAN01S_RS08870a (R)-2-hydroxy acyl-CoA acyl-CoA 2-O-(α-D- polyphosphate bifunctional ornithine N-acetylglutamate UDP-N-acetyl-α-D-glucosamine acetylglucosaminyltransferase: phosphate JAN01S_RS01025 RlmB: pyrophosphohydrolase: threonine JAN01S_RS06595 aminotransferase: amino acid ammonia-lyase: tryptophan 2,3- [+ 5 isozymes] desaturase: desaturase: a nucleoside glucopyranosyl) uroporphyrinogen-III acetyl-CoA carboxylase kinase (could be JAN01S_RS07290 acetyltransferase/ isomerase: sulfate JAN01S_RS14490 phosphoribosyltransferase: synthase: amino acid aminotransferase: undecaprenyldiphospho-JAN01S_RS02190 even numbered JAN01S_RS11195 trans-4-hydroxy- synthase: JAN01S_RS14490 UDP-N-acetylglucosamine a tRNA precursor aminotransferase: JAN01S_RS05115 guanyltransferase: cob(I)yrinic acid C-methyltransferase/ carboxyltransferase JAN01S_RS05275 JAN01S_RS01355 JAN01S_RS03300 JAN01S_RS06725 dehydratase: N-acetylglutamate anthranilate exoribonuclease: aminotransferase: dioxygenase: JAN01S_RS14490 N-acetyl-(N-acetyl-β-D- diphosphate AMP straight chain JAN01S_RS07630 JAN01S_RS07630 diphosphate -3-phospho- 2-O- polyphosphate AMP L-proline N-acetylglutamate adenylyltransferase asp L-aspartyl-4-phosphate JAN01S_RS11885 with a 5' extension urocanate UDP JAN01S_RS01005 dAMP JAN01S_RS00050 synthase: asp 1-carboxyvinyltransferase: JAN01S_RS09005 JAN01S_RS01435 JAN01S_RS02385 oxaloacetate a purine adenosyl- a ferricytochrome a ferricytochrome D-glycerate a c-diamide uroporphyrinogen- subunit: 2251 phosphotransferase synthase: citraconate small subunit: [+ 2 isozymes] synthase: JAN01S_RS01435 (S)-3-methyl-2- glucosaminyl)muramoyl- 2,3,4-saturated palmitoleoyl-CoA oleoyl-CoA methylguanosine 1-(5-phospho- bifunctional ornithine JAN01S_RS09785 and a long 3' trailer a tRNA precursor with N-formylkynurenine ribonucleoside cobinamide b b adenosyltransferase: III synthase: JAN01S_RS02285 (2Z)-2-aminobut- N-acetyl-gamma- JAN01S_RS03330 L-alanyl-γ-D-glutamyl-L- 5 5 in 23S rRNA (pap)): JAN01S_RS11140 JAN01S_RS07690 β-D-ribosyl)-ATP aspartate- JAN01S_RS11885 3-methyl-2- oxopentanoate urocanate fatty acyl CoA aspartate kinase: (S)-2-acetolactate glutamyl-phosphate acetyltransferase/ UDP-N-acetyl-α-D- a 5' extension and 5'-diphosphate phosphate adenosyl-JAN01S_RS08415 JAN01S_RS07230 malonyl-CoA JAN01S_RS13915 N-acetyl-L- APS 2-enoate semialdehyde bifunctional ornithine aspartate kinase: oxobutanoate hydratase: lysyl-D-alanyl-D-alanine JAN01S_RS06595 phosphoribosyl-ATP N-acetylglutamate anthranilate a short 3' extension PPP cobyrinate long chain reductase: glucosamine-enolpyruvate ribonuclease D: i precorrin-2 methionine diphosphatase: dehydrogenase: acetyltransferase/ acetylglutamate JAN01S_RS06595 ribonuclease D: ribonuclease PH: JAN01S_RS05120 ketol-acid JAN01S_RS11135 synthase: JAN01S_RS13845 ribonuclease P a,c-diamide polyphosphate JAN01S_RS08725 N-acetylglutamate anthranilate UDP-N- JAN01S_RS13845 JAN01S_RS03185 4-imidazolone- L-aspartyl- JAN01S_RS03295 reductoisomerase: kinase: JAN01S_RS11140 protein component: L-asparagine synthase: phosphoribosyltransferase: L-aspartyl- acetylenolpyruvoylglucosamine 2-methylbutanoyl-CoA 5-propanoate 4-phosphate 1-(5-phospho-β- JAN01S_RS01460 L-aspartate- JAN01S_RS11145 JAN01S_RS14555 L-kynurenine degradation I 2-iminobutanoate JAN01S_RS11140 N-acetyl-L- N-acetyl-L- JAN01S_RS08895 4-phosphate reductase: JAN01S_RS06265 D-ribosyl)-AMP (2R)-2,3- semialdehyde N-acetyl-L- isobutanoyl-CoA imidazolonepropionase: a single a 2-methyl all trans-decaprenyl- 6-methoxy-2-all- adenine 1518 / 4-(cytidine 5'- a guanine 527 a double a [lipoyl-carrier a 1-acyl-sn aspartate- Glu glutamate 5- glutamate N-(5- a tRNA precursor with preuroporphyrinogen ADP-D-ribose a kanamycin 6 citraconate dihydroxy-3- glutamate UDP-N-acetylmuramate a tRNA precursor O-acetyl-L-serine hydrogen selenide branched 2,3,4- 2-methoxy-6- trans-octaprenyl- 1519 diphospho)-2-C- protein]-N -[(R) -glycerol 3- phosphoribosyl-AMP semialdehyde aspartate- JAN01S_RS05130 kynureninase: stranded DNA adenine in 16S rRNA GTP H O in 16S rRNA stranded DNA semialdehyde 4-hydroxy- phosphoribosyl) with a 5' extension a short 3' extension asn 2 ADP-ribose aminoglycoside methylbutanoate acetylglutamate semialdehyde dehydrogenase: exodeoxyribonuclease cysteine synthase: saturated fattylong-chain acid fatty 1,4-benzoquinol 1,4-benzoquinone 16S rRNA bifunctional methyl-D-erythritol4-(cytidine 5'- 16S rRNA topoisomerase II: -dihydrolipoyl]- isopropylmalate phosphate1-acyl-sn-glycerol- dehydrogenase: cyclohydrolase: tetrahydrodipicolinate acetylornithine JAN01S_RS02380 bifunctional bifunctional -anthranilate JAN01S_RS09190 (E)-2- N-formimino- asparaginase: VII small subunit: (adenine(1518)-N(6)/ ribosome small uroporphyrinogen-III pyrophosphatase: (guanine(527)-N(7) phosphotransferase: JAN01S_RS15135 L-lysine isomerase: JAN01S_RS03325 2,3-dihydroxy- kinase: dehydrogenase: JAN01S_RS15665 acid--CoA ligase: demethylmenaquinone demethylmenaquinone diphospho)- dihydrolipoyl 3-phosphate JAN01S_RS08725 synthase: aminotransferase: bifunctional 1-(5- subunit-dependent JAN01S_RS06970 JAN01S_RS10730 β isovalerate JAN01S_RS11145 JAN01S_RS08725 ribonuclease: ribonuclease PH: ribonuclease D: methylcrotonoyl-CoA L-glutamate anthranilate JAN01S_RS05405 JAN01S_RS05080 JAN01S_RS08870 adenine(1519)-N(6))- C-methyltransferase/ 2-C-methyl-D- )-methyltransferase DNA gyrase dehydrogenase: JAN01S_RS01350 acyltransferase: 1-(5-phospho- -D-ribosyl)- 2-oxobutanoate JAN01S_RS09810 argD bifunctional o- methyltransferase/2- methyltransferase/2- L-aspartate- phosphoribosyl)-5-((5- Glu JAN01S_RS03185 JAN01S_RS13845 methylacrylyl-CoA dimethyltransferase: GTPase A: uroporphyrinogen- ADP-ribose RsmG: aminoglycoside subunit A: 5-[(5-phosphoribosylamino) dehydratase: N-acetylglutamyl- ala UDP-N-acetyl-α-D-muramate JAN01S_RS14555 asp exodeoxyribonuclease acetylhomoserine/ [+ 5 isozymes] methoxy-6-polyprenyl-1,4- methoxy-6-polyprenyl-1,4- erythritol kinase: JAN01S_RS14230 isopropylmalate a 1-acyl-2-JAN01S_RS04325 phosphoribosylamino) L-aspartate- formimidoylglutamase: a 2-methyl JAN01S_RS15150 semialdehyde JAN01S_RS01445 acetolactate 4-hydroxy- 6 JAN01S_RS071501518 III synthase: pyrophosphatase: 7 JAN01S_RS14575 phosphotransferase: JAN01S_RS12375 isomerase: methylideneamino]imidazole- N-acetylglutamate phosphate semialdehyde 3-hydroxy-isobutyryl- VII large subunit: o-acetylserine benzoquinol methylase: benzoquinol methylase: N -dimethyladenine 2-phospho-4-(cytidineJAN01S_RS07145 an N - dihydrolipoyl palmitoyl-sn tetrahydrodipicolinate methylideneamino)imidazole- JAN01S_RS05125 branched [+ 4 isozymes] a negatively homoserine synthase: glutamate racemase: JAN01S_RS05085 AMP diphosphate 6 1519 JAN01S_RS07230 JAN01S_RS10475 527 JAN01S_RS08300 JAN01S_RS01355 4-carboxamide 3-methyl-2- synthase: UDP-N-acetylmuramate- CoA hydro-lyase: sulfhydrylase: 2,3,4-saturated 6-methoxy-3-methyl-JAN01S_RS03685 3-methyl-6-methoxy-JAN01S_RS03685 /N -dimethyladenine 5'-diphospho)-2-C- methylguanine dehydrogenase: -glycerol 3- synthase: N-acetyl-gamma- 4- carboxamide isomerase/ homoserine (2S,3S)-3-hydroxy-2- a single-stranded a ribonucleoside phosphate GDP H + a kanamycin supercoiled DNA (2R,3S)-3- dehydrogenase: oxobutanoate JAN01S_RS06725 gln JAN01S_RS11885 JAN01S_RS03150 JAN01S_RS11715 JAN01S_RS15365 in 16S rRNA [+ 2 isozymes] in 16S rRNA a [lipoyl-carrierJAN01S_RS13460 phosphate bifunctional 1-(5- glutamyl-phosphate phosphoribosylanthranilate dehydrogenase: -L-alanine ligase: methylbutanoyl-CoA Glu fatty acyl-CoA 2-all-trans-decaprenyl- 2-octaprenyl-1,4- D-ribofuranose methyl-D-erythritol 3'-phosphate methylmalate JAN01S_RS13775 [+ 2 isozymes] JAN01S_RS09055 lipoprotein posttranslational oligodeoxyribonucleotide 5'-monophosphate AMP protein]-N 6 - phosphoribosyl)-5-((5- (2S,4S)-4- bifunctional ornithine JAN01S_RS02195 (S)-3-hydroxy- 1,4-benzoquinol benzoquinone uroporphyrinogen-III 5-phosphate + + reductase: isomerase PriA: JAN01S_RS13775 an uncharged tRNA 3-hydroxy-2- glycine cleavage acetate L-selenocysteine H RS08470 H 2-isopropylmalate branched-chain (S)-2-aceto-2- carbamoyl D-glt modification lipoyl-L-lysine phosphoribosylamino) hydroxy-2,3,4,5- acetyltransferase/ JAN01S_RS11135 JAN01S_RS11080 isobutanoyl-CoA L-homoserine synthase: UDP-N-acetyl-α-D-muramoyl-L-alanine methylbutyryl-CoA methylideneamino)imidazole- amino acid hydroxybutanoate tetrahydrodipicolinate phosphate N-acetylglutamate N-acetyl-L- L-homoserine a [prolipoprotein]- a [glycine- N-acetyl-L- 1-(o- 3-hydroxyisobutyryl- dehydrogenase: JAN01S_RS08690 aminotransferase: synthase 4- carboxamide isomerase/ ketol-acid 4-hydroxy- synthase: ornithine glutamate 5- carboxyphenylamino) L-cysteine CoA hydrolase: cleavage complex homoserine kinase: UDP-N-acetylmuramoyl- JAN01S_RS12690 6 an odd numbered a 3-methyl- 2-methoxy-6-all an [apo BCAA a 2'- a peptide with 966 (E)-4-hydroxy-3- a (9Z)-3- phosphoribosylanthranilate JAN01S_RS01435 reductoisomerase: large JAN01S_RS11140 semialdehyde H protein] N - glycine α-D- a guanine met RS06820 met tetrahydrodipicolinate -1'-deoxyribulose homoserine kinase: prolipoprotein JAN01S_RS11715 2-oxoglutarate branched 2,3,4- trans-heptaprenyl- deoxyribonucleoside [DNA] a uracil in DNA DMKH methylbut-2-en- DNA with lesion JAN01S_RS13785 (2S)-2- subunit: carB L-alanine--D- Metabolic Clusters dehydrogenase straight chain 4-methyl-2- dehydrogenase 2 an N-terminal in 16S rRNA oxohexadec- isomerase PriA: JAN01S_RS01460 reductase: acetylornithine 5'-phosphate JAN01S_RS13785 diacylglyceryl 2-methylacetoacetyl-CoA lipoyl-L-lysine glucopyranose ATP ATP dIDP isopropylmalate glutamate ligase: (S)-3-hydroxy- 2-oxoglutarate 2,3,4-saturated saturated fatty acid 1,4-benzoquinol oxopentanoate E2 protein] N 6 5'-triphosphate uracil-DNA bifunctional L-alanine aminopeptidase N: 16S rRNA 1-yl diphosphate 9-enoyl-[acp]3-oxoacyl-ACP excinuclease JAN01S_RS11080 JAN01S_RS09010 [+ 2 isozymes] hydrogencarbonate aminotransferase: indole-3-glycerol (aminomethyl- long-chain fatty bifunctional DNA polymerase 1-phosphate 4-hydroxy-3- O-phospho- (R)-2,3-dihydroxy- transferase: isobutanoate gcv system: ferredoxin fatty acidlong-chain fatty branched-chain glycosylase: (guanine(966)-N(2) ABC subunit C: adenylate/guanylate isopropylmalate val argD phosphate synthase: O-phospho- JAN01S_RS02180 N-end rule pathway I (prokaryotic) acetyl-CoA transferring): acid--CoA ligase: demethylmenaquinone -lipoyl-L-lysine III subunit glucose-1-phosphate demethylmenaquinone JAN01S_RS03890 methylbut-2-en-1- reductase: nucleoside- L-homoserine phosphoribulosylformimino- 3-methylpentanoate (S)-2,3,4,5- carbamoyl JAN01S_RS03365 JAN01S_RS01700 oxidoreductase acid--CoA ligase: alpha-keto acid JAN01S_RS15970 )-methyltransferase JAN01S_RS07845 cyclase domain- met RS10115 met isomerase: L-ornithine carbamoyl JAN01S_RS03340 L-homoserine acetyltransferase: JAN01S_RS01700 JAN01S_RS08870 methyltransferase/2- gamma and tau: adenylyltransferase: methyltransferase/2- aminopeptidase N: yl diphosphate JAN01S_RS00325 diphosphate kinase: tetrahydrodipicolinate phosphate L-isoleucine N-acetyl-L- meso-diaminopimelate α a [prolipoprotein]- JAN01S_RS08870 dehydrogenase AICAR-phosphate 2,3-dihydroxy-3- phosphate (1S,2R)-1- UDP-N-acetyl- -D-muramoyl- leucyl/phenylalanyl- JAN01S_RS07540 [+ 2 isozymes] subunit alpha: uracil-DNA JAN01S_RS08045 methoxy-6-polyprenyl-1,4- RsmD: excinuclease containing protein: threonine synthase: JAN01S_RS01350 biosynthesis IV (S-diacylglyceryl) an odd numbered [+ 5 isozymes]a 3-methyl- methoxy-6-polyprenyl-1,4- JAN01S_RS06610 JAN01S_RS10355 synthase: a (3R,9Z)-3-[+ 5 isozymes] JAN01S_RS13495 methylvalerate 2,3,4,5- ornithine L-alanyl-D-glutamate tRNA--protein JAN01S_RS03800 [+ 5 isozymes] subunit E2: JAN01S_RS01290 JAN01S_RS02525 synthase C-(indol-3- threonine synthase: [+ 6 isozymes] benzoquinol methylase: glycosylase: glucose-1-phosphate benzoquinol methylase: 2 JAN01S_RS00930 ABC subunit B: JAN01S_RS13780 isopropylmalate -L-cysteine (S)-methylmalonate- a [glycine- a reduced straight chain branched a [apo BCAA dehydrogenase [+ 6 isozymes] a peptide ala an N - 2-C-methyl-D- hydroxyhexadec- imidazole glycerol hydro-lyase: tetrahydropyridine- large acetylornithine yl)glycerol JAN01S_RS13780 transferase: diphosphate AMP diphosphate AMP JAN01S_RS12955 JAN01S_RS04275 JAN01S_RS03685 JAN01S_RS03525 cyclic-AMP dITP acetate acetate propanoate a [glycine-cleavage H + ferredoxin [iron- CO succinyl-CoA 6-methoxy-3-methyl-2-JAN01S_RS03685 E2 protein] N 6 -S-[3- [DNA] adenylyltransferase: methylguanine 966 erythritol-2,4- 9-enoyl-[acp] isomerase: Mur ligase: a [protein] semialdehyde cleavage complex 2 2,3,4-saturated 2,3,4-saturated phosphate synthase JAN01S_RS01445 2,6-dicarboxylate N- subunit: carB deacetylase: 3-phosphate JAN01S_RS08960 propanoyl-CoA acetyl-CoA 6 an apyrimidinic DNA without RS14135 long-chain fatty signal peptidase II: an N-terminal 6 complex H protein] N - uracil JAN01S_RS03240 MQH thr JAN01S_RS01355 JAN01S_RS04320 N-terminal L- H protein] N - sulfur] cluster fatty acyl CoA fatty acyl-CoA all-trans-heptaprenyl- methylbutanoyl]dihydrolipoyl- 2 in 16S rRNA cyclodiphosphate subunit HisH: (S)-3-methyl-2- succinyltransferase: JAN01S_RS07550 tryptophan synthase thr arginyl-[protein] site in DNA ADP-α-D-glucose lesion acid--CoA ligase: [+ 2 isozymes] JAN01S_RS02240 leucyl-L-arginine aminomethyldihydrolipoyl- 1,4-benzoquinol L-lysine a cation a cation JAN01S_RS16090 UDP-N-acetylmuramoyl- methylmalonate- dihydrolipoyl- JAN01S_RS11075 2-isopropylmaleate oxopentanoate JAN01S_RS08870 subunit beta: D-ala L-lysine acetate acetate threonine carbamoyl L-alanyl-D- semialdehyde L-lysine branched-chain N-succinyl-2-amino- ornithine L-ornithine JAN01S_RS03345 L-glutamate an (S-diacyl- RS14145 dehydratase: imidazole glycerol [+ 5 isozymes] phosphate a lipoprotein dehydrogenase isopropylmalate carbamoyltransferase: glutamate--2, 6- sn-glyceryl) leucyl/phenylalanyl- 2-methoxy-6-all 1-stearoyl- a 5'-half-tRNA an [amino group carrier a 3- a peptide with a (9Z)-3-oxo- (2R,3S)-3- phosphate synthase amino acid 6-ketopimelate propanoyl-CoA tryptophan synthase biosynthesis II D-alanine--D- signal peptide (S)-3-amino-2- a CDP- sn-glycerol a 2,3,4-saturated a 2,3,4-saturated 2- a 3'-half-tRNA a 3-oxopimeloyl- a cation a cation JAN01S_RS00050 isomerase: diaminopimelate ligase: tRNA--protein (CoA acylating): L-methionine degradation 16-hydroxypalmitate trans-octaprenyl- DMKH2-13 adenosylcobinamide protein]-C-terminal-γ- oxododecanoyl- an N-terminal octadec-9- MEP aminotransferase: JAN01S_RS11155 subunit alpha: alanine ligase: -L-cysteinyl- methylpropanoate a palmitoyl-[acp] sn-glycerol molecule with isopropylmalate IDP cyclase subunit: succinyldiaminopimelate JAN01S_RS10590 I (to L-homocysteine) diacylglycerol 3-phosphate fatty acyl-[acp] lysophosphatidate molecule with [acp] methyl ester a sugar RS02725 a sugar (2Z)-2-aminobut- JAN01S_RS01350 2-oxoacid:ferredoxin ornithine JAN01S_RS02165 [apolipoprotein] transferase: aminomethyltransferase: long-chain fatty CDP-diacylglycerol-- 1,4-benzoquinol 3-phosphate a 2',3'-cyclic bifunctional adenosylcobinamide (L-glutamyl)-L-glutamate [acp] 3-oxoacyl-ACP L-methioninemethionine 3-oxoacyl-ACP enoyl-[acp]beta-ketoacyl- isopropylmalate 1-deoxy-D-xylulose- JAN01S_RS03315 JAN01S_RS01435 transaminase: JAN01S_RS03350 2-oxoglutarate JAN01S_RS01320 a [protein] L-serine degradation 1-acyl-sn-glycerol- bifunctional 1-acyl-sn-glycerol- a 5'-OH end acetylglutamate 2-enoate isopropylmalate oxidoreductase carbamoyltransferase: an N-terminal JAN01S_RS08960 L-arginine degradation JAN01S_RS05420 acid--CoA ligase: glycerol-3-phosphate 3- phosphate end 2'-5' RNA ligase: demethylmenaquinone kinase/ reductase: aminopeptidase: reductase: ACP reductase: isomerase: 5-phosphate JAN01S_RS10020 glutamate N-terminal L- 3-phosphate demethylmenaquinone 3-phosphate nucleoside- JAN01S_RS11155 ser UDP-N-acetyl-α-D-muramoyl-L-alanyl- met X (arginine JAN01S_RS08870 adenosylcobinamide kinase: JAN01S_RS01355 D-erythro- isomerase: ile subunit beta: indole dehydrogenase: D-alanyl-D-alanine L-lysyl-[protein] propanoyl-CoA gcv system: phosphatidyltransferase: acyltransferase: methyltransferase/2- acyltransferase: JAN01S_RS02765 methyltransferase/2- JAN01S_RS00325 JAN01S_RS11390 JAN01S_RS00325 JAN01S_RS08030 reductoisomerase: diphosphate kinase: N-succinyl-L,L-2,6- γ-D-glutamyl-meso-2,6-diaminopimelate leucyl-L-lysine JAN01S_RS11145 AICAR imidazole-glycerol- JAN01S_RS01355 JAN01S_RS03795 JAN01S_RS05650 a peptide methionine monooxygenase pathway) JAN01S_RS01700 [+ 5 isozymes] JAN01S_RS09095 2'-5' RNA ligase: methoxy-6-polyprenyl-1,4- phosphate isopropylmalate JAN01S_RS00920 JAN01S_RS13495 a sugar RS05050 a sugar diaminopimelate an N-acyl-(S- ser 1-(3-sn- JAN01S_RS04325a 2,3,4-saturated methoxy-6-polyprenyl-1,4- JAN01S_RS043251-stearoyl- an [amino group carrier a (3R)-3-[+ 5 isozymes] [+ 2 isozymes] a (3R)-3-[+ 5 isozymes] a (3R,9Z)-3-[+ 5 isozymes] 1-deoxy-D- adenosyltransferase: benzoquinol methylase: guanyltransferase: phosphate (2R,3S)-3- glutamate L-serine 16-hydroxypalmitoyl- benzoquinol methylase: JAN01S_RS10875 protein]-C-terminal- isomerase: xylulose 5- succinyl- 2-oxobutanoate L-citrulline tryptophan synthase UDP-N-acetylmuramoyl- diacyl-sn-glyceryl) arg AMP diphosphate phosphatidyl) 1,2-diacyl-sn 2-palmitoyl- a ligated tRNA hydroxydodecanoyl- a peptide met hydroxypimeloyl- hydroxy-octadec- 2-iminobutanoate imidazoleglycerol- JAN01S_RS16145 CMP acyl-carrier protein acyl-carrier protein JAN01S_RS03685 JAN01S_RS01005 γ JAN01S_RS01350 ITP isopropylmalate subunit beta: dehydrogenase: tripeptide--D-alanyl- -L-cysteinyl- ammonia-lyase: CoA -sn-glycerol -glycerol 3- 6-methoxy-3-methyl-JAN01S_RS03685 sn-glycerol with a 2'-5' linkage -(5-phospho-L- [acp] [acp] methyl ester 9-enoyl-[acp] phosphate diaminopimelate L-citrulline SAM adenosyl-cobinamide (2S)-2- phosphate JAN01S_RS04045 JAN01S_RS15340 menaquinol-13 glutamyl)-L-glutamate 3-isopropylmalate desuccinylase: acetolactate argininosuccinate JAN01S_RS03345 D- alanine ligase: [lipoprotein] Pentose Phosphate Pathways 2-aminoprop- 3-phosphate phosphate 2-all-trans-octaprenyl- 3-phosphate isopropylmalate a sugar RS10570 a sugar dehydratase: L-threonine L-glutamate phosphate dehydrogenase: L-proline biosynthesis I JAN01S_RS04865 synthase: synthase: Glu JAN01S_RS02170 2-enoate 1,4-benzoquinol JAN01S_RS11065 argininosuccinate degradation II 4-guanidinobutyramide degradation X JAN01S_RS01440 JAN01S_RS06725 JAN01S_RS11515 pentose phosphate pathway (non-oxidative branch) synthase: trp α 2-oxobutanoate imidazole acetol- (2S)-2-isopropyl- L,L-diaminopimelate [+ 2 isozymes] UDP-N-acetyl- -D-muramoyl-L- amidase: JAN01S_RS11515 L-arginino- (15Z)- 2-methoxy-6-all 1-stearoyl- a (7Z,10Z,13Z,16Z 6-methoxy-3-methyl- a (7Z)-3- a 1-acyl-sn a sugar RS13045 a sugar phosphate Glu superpathway of L-serine alanyl-γ-D-glutamyl-meso-2,6- di-trans,octa-cis-undecaprenyl phosphate 5-oxo-L-proline metabolism thr Glu Secondary Metabolite Degradation 18-hydroxystearate pristanate adenosylcobinamide 1-myristoylglycerol a 3-oxoicosanoyl- a cis-delta21-3- 3-oxosuccinate (S)-2-aceto-2- succinate D-ribulose JAN01S_RS05620 trans-nonaprenyl- a stearoyl-[acp] sn-glycerol ,19Z)-3-oxodocosa- DMK-12 2-all-trans-octaprenyl- an acetoacetyl-[acp] oxohexacos- -glycerol 3- L-arginino- L-threonine 3- SAH tetracosenoate 3-phosphate IMP acetolactate glutamate 5-kinase: diaminopimelate and glycine biosynthesis I diaminopimeloyl-D-alanyl-D-alanine 5-phosphate [+ 2 isozymes] glutamate [acp] oxo-C40:1-[acp] histidinol-phosphate hydroxybutanoate argininosuccinate an N-terminal dehydrogenase: 2-iminopropanoate long-chain fatty long-chain fatty long-chain fatty 1,4-benzoquinol 3-phosphate 7,10,13,16,19-pentaenoyl-[acp]3-oxoacyl-ACP bifunctional adenosylcobinamide 1,4-benzoquinol 3-oxoacyl-ACP 1-acyl-sn-glycerol- 3-oxoacyl-ACP 7-enoyl-[acp]3-oxoacyl-ACP 3-oxoacyl-ACP phosphate1-acyl-sn-glycerol- synthase: JAN01S_RS09260 succinate bifunctional 1-acyl-sn-glycerol- 2-octaprenyl-3- transaminase: epimerase: dehydrogenase: myo-, chiro- and scyllo-inositol degradation acid--CoA ligase: acid--CoA ligase: acid--CoA ligase: demethylmenaquinone kinase/ guanosine γ-L-glutamyl argininosuccinate 2-aceto-2-hydroxy- lyase: 3-phospho-D-glycerate L-glutamine UDP-N-acetylmuramyl L-glutaminyl- an N-terminal L- JAN01S_RS13710 adenosylhomocysteinase: 4-guanidinobutanoate demethylmenaquinone 3-phosphate reductase: methyl-6-methoxy- reductase: 3-phosphate reductase: reductase: reductase: 3-phosphate JAN01S_RS06725 JAN01S_RS05890 ribulose-phosphate ribose-5-phosphate L-2-amino-3- JAN01S_RS05650 monophosphate a sugar RS10055 a sugar JAN01S_RS11060 5-phosphate butanoate JAN01S_RS11165 biosynthesis I [protein] glutamyl-[protein] JAN01S_RS08870 JAN01S_RS08870 JAN01S_RS08870 JAN01S_RS00325 methyltransferase/2- adenosylcobinamide JAN01S_RS00325 acyltransferase: JAN01S_RS00325 JAN01S_RS00325 JAN01S_RS00325 acyltransferase: 4-methyl-2- lyase: D-3-phosphoglycerate pentapeptide JAN01S_RS10795 methyltransferase/2- acyltransferase: 1,4-benzoquinol [+ 2 isozymes] 3-epimerase: isomerase: oxobutanoate glutamate [+ 5 isozymes] [+ 5 isozymes] [+ 5 isozymes] methoxy-6-polyprenyl-1,4- phosphate reductase: L-histidinol- JAN01S_RS11165 isomeroreductase: dehydrogenase: phosphotransferase: 1D-chiro-inositol methoxy-6-polyprenyl-1,4- JAN01S_RS04325 [+ 5 isozymes] hydroxylase: [+ 5 isozymes] 1-myristoyl-2-JAN01S_RS04325 [+ 5 isozymes] [+ 5 isozymes] [+ 5 isozymes] a 1,2-diacyl-JAN01S_RS04325 (S)-2-aceto-2- oxopentanoate gamma-glutamyl- meso-diaminopimelate Aromatic Compound JAN01S_RS03285 JAN01S_RS05105 1-stearoyl-2- a (3R,7Z,10Z,13Z,16Z a (3R)-3- a (3R)-3- a (3R,7Z)-3- a cis-delta21-3- JAN01S_RS04370 phosphate JAN01S_RS01460 arg glycine C- dehydrogenase: benzoquinol methylase: guanyltransferase: phosphate JAN01S_RS04475 Glu JAN01S_RS08485 Biosynthesis L-homocysteine 18-hydroxystearoyl- (Z)-15- benzoquinol methylase: stearoyl-sn ,19Z)-3-hydroxydocosa- JAN01S_RS12530 hydroxybutanoyl- palmitoleoyl hydroxyicosanoyl- hydroxyhexacos- hydroxyC40:1- sn-glycerol hydroxybutanoate branched-chain ribose-5-phosphate acetyltransferase: JAN01S_RS04045 pyruvate AMP diphosphate AMP diphosphate AMP diphosphate pristanoyl-CoA acyl-carrier protein JAN01S_RS03685 JAN01S_RS01005 a sugar RS05510 a sugar diaminopimelate arg (R)-2,3-dihydroxy- 3-phosphooxypyruvate glutamine synthetase: CoA tetracosenoyl-CoA JAN01S_RS03685 phosphatidate 3-phosphate GMP histidinol- amino acid reductase: D-xylulose 2-oxoglutarate 6-methoxy-3-methyl-2- -glycerol 3- 7,10,13,16,19-pentaenoyl-[acp] 3-demethylubiquinol-8 [acp] [acp] 7-enoyl-[acp] [acp] ketol-acid L-methionine biosynthesis III undecaprenyldiphospho- a [protein] with isomerase: JAN01S_RS13715 4-aminobutanoate myo-inositol adenosyl-cobinamide phosphatase: JAN01S_RS09275 decarboxylase: 3-methylpentanoate JAN01S_RS13620 chorismate biosynthesis I all-trans-nonaprenyl- phosphate menaquinol-12 reductoisomerase: aminotransferase: phosphoserine γ-L-glutamyl 5-phosphate JAN01S_RS10365 phosphate JAN01S_RS13770 N-acetylmuramoyl-L-alanyl- an N-terminal 5- JAN01S_RS13985 JAN01S_RS01435 2,3-dihydroxy-3- glutamine synthetase: 5-phosphate glutathione gly 1-keto-D- 1,4-benzoquinol JAN01S_RS01460 L-glutamate-5- aminotransferase: γ-D-glutamyl-meso-2,6- D-erythrose oxo-L-proline scyllo-inositol L-asparagine methylvalerate L-homoserine JAN01S_RS11045 inositol 2- chiro-inositol a cation RS14730 a cation (R)-2,3-dihydroxy- histidinol semialdehyde lys JAN01S_RS12150 diaminopimeloyl-D-alanyl-D-alanine 4-phosphate D-ribose 5- biosynthesis III hydro-lyase: homoserine O- gln L-glutamine leu phosphate dehydrogenase: DNA combined with exogenous DNA 2-methoxy-6-all a 3,5,7,9,11,13,15- 4-hydroxy-2- a 6-(N-acetyl-α- a 3- (2Z,4E)-2-amino- a (7Z)-3- 3-methylpentanoate JAN01S_RS01445 undecaprenyldiphospho- 3-deoxy-7- L-phenylalanine degradation I (aerobic) degradation I a 3-oxoglutaryl- a cis-delta19-3- a [protein]-L- histidinol (tRNA-dependent) acetyltransferase: 3-phospho-L-serine L-glutamate JAN01S_RS10585 18-hydroxyoleate palmitate trans-hexaprenyl- oleate hepta-oxo- nonenal-[Cys- D-glucosaminyl)- oxaloacetate oxodocosanoyl- 5-methyl-muconate oxotetradec- Ap4A 2,3-dihydroxy-3- S-adenosyl-L-methionine cycle II muramoylpentapeptide beta-N- phosphoheptulonate to form a recombinational junction [acp] methyl ester oxo-C38:1-[acp] methionine (S)-3-methyl-2- JAN01S_RS02115 transketolase: degradation I L-glutamate Holliday junction resolvase long-chain fatty long-chain fatty 1,4-benzoquinol long-chain fatty Gly] conjugate type II citrate synthase: semialdehyde dehydrogenase: O-acetyl-L- (6R)-4a-hydroxy- bifunctional hexadecanoyl-[PKS-acp]aldo/keto reductase: aminopeptidase N: 1-phosphatidyl- [acp] 3-oxoacyl-ACP 3-oxoacyl-ACP 7-enoyl-[acp]beta-ketoacyl- 3-oxoacyl-ACP peptide-methionine diadenosine a cation RS01635 a cation methylvalerate asp hydrogen sulfide acetylglucosaminyltransferase: synthase: JAN01S_RS07915 degradation IX (via 2-hydroxymuconic JAN01S_RS11055 (S)-1-pyrroline- oxopentanoate phosphoserine 5-oxo-L-proline 4a-hydroxytetrahydrobiopterin gln RuvX: JAN01S_RS06915 acid--CoA ligase: acid--CoA ligase: acid--CoA ligase: 1D-myo-inositolGlcNAc-PI de- JAN01S_RS16080 (S)-S-oxide tetraphosphate hydro-lyase: homoserine JAN01S_RS02190 JAN01S_RS08810 tetrahydrobiopterin scyllo-inosose demethylmenaquinone JAN01S_RS06040 JAN01S_RS10355 reductase: semialdehyde reductase: ACP reductase: reductase: phosphatase SerB: dehydratase: 4-aminobutanoate) carbamoyl JAN01S_RS08870 JAN01S_RS08870 JAN01S_RS08870 N-acetylase: 5-carboxylate met branched-chain D-sedoheptulose D-glyceraldehyde Glu crossover junction methyltransferase/2- aldo/keto reductase: citrate synthase/ JAN01S_RS00325 JAN01S_RS00325 JAN01S_RS08030 JAN01S_RS00325 reductase: hydrolase: JAN01S_RS01445 histidinal O-acetylhomoserine 3-deoxy- aminopeptidase N: dehydrogenase: methionine amino acid JAN01S_RS08040 lipid II (meso diaminopimelate containing) 5-oxoprolinase: 7-phosphate 3-phosphate phenylalanine 4- JAN01S_RS04215 phosphate endodeoxyribonuclease [+ 5 isozymes] [+ 5 isozymes] [+ 5 isozymes] JAN01S_RS04760 methylcitrate synthase: JAN01S_RS13060 JAN01S_RS01550 pyrroline-5- an L-aspartyl- sulfhydrylase: D-arabino- NAD-glutamate Glu methoxy-6-polyprenyl-1,4- 9-hydroxy-3,5,7,11,13,15-JAN01S_RS04095 4-hydroxy-2-JAN01S_RS03890 α a (3R)-3-[+ 5 isozymes] JAN01S_RS12410 a (3R)-3-[+ 5 isozymes] a (3R,7Z)-3-[+ 5 isozymes] a cis-delta19-3-[+ 5 isozymes] a protein-L- (S)-3-methyl-2- L-cysteine adenosyltransferase: JAN01S_RS15895 monooxygenase: synthase large 6-( -D- [+ 2 isozymes] an anion RS15065 an anion histidinol carboxylate Asn aminotransferase: [+ 2 isozymes] dehydrogenase: RuvC: JAN01S_RS02020 benzoquinol methylase: JAN01S_RS12160 (2Z,4E)-2-amino- oxopentanoate biosynthesis I [tRNA ] JAN01S_RS15365 ser heptulosonate glutamate 18-hydroxyoleoyl- hexaoxohexadecanoyl- gly nonenal-[L- glucosaminyl)- hydroxydocosanoyl- hydroxyglutaryl- hydroxytetradec- hydroxyC38:1- methionine- methionine synthase: JAN01S_RS16145 JAN01S_RS01435 transaldolase: JAN01S_RS14180 subunit: carB resolution of recombinational junction AMP diphosphate AMP diphosphate palmitoyl-CoA diphosphate AMP oleoyl-CoA acetate 5-methyl-muconate ADP dehydrogenase: reductase: 7-phosphate JAN01S_RS14035 decarboxylase: 3D-(3,5/4)- CoA 6-methoxy-3-methyl-2-JAN01S_RS03685 [PKS-acp] Cys] conjugate 1-phosphatidyl- citrate [acp] [acp] methyl ester 7-enoyl-[acp] [acp] (S)-S-oxide branched-chain aspartyl/glutamyl- JAN01S_RS01605 Glu JAN01S_RS07910 [+ 7 isozymes] formation of two intact strands JAN01S_RS11055 JAN01S_RS07290 L-glutamate L-homocysteine (6R)-L-erythro-5,6,7,8- L-erythro-7,8- [+ 2 isozymes] JAN01S_RS15425 trihydroxycyclohexane- tRNA(Asn/Gln) serine 3-dehydroquinate all-trans-hexaprenyl- 1D-myo-inositol pro ProY pro amino acid ser methionine synthase: ile biosynthesis III 2-oxoglutarate 4-aminobutanoate Glu an anion RS15505 an anion hydroxymethyltransferase: synthase: tetrahydrobiopterin dihydrobiopterin 1,2-dione 1,4-benzoquinol aminotransferase: serine amidotransferase JAN01S_RS07430 D-erythrose his pro methionine methionine JAN01S_RS08490 F6P 3D-(3,5/4)- JAN01S_RS01435 acetyltransferase: subunit C: JAN01S_RS06890 4-phosphate 2-oxoglutarate synthase: synthase: trihydroxycyclohexane- JAN01S_RS11755 JAN01S_RS01530 glutamate a 2-methoxy-6-all- an N-terminal- a 3- a (5Z)-3- L-homocysteine SAM JAN01S_RS01605 JAN01S_RS07430 gly 3-dehydroquinate transketolase: 1,2-dione acylhydrolase methylmalonate a very-long- a nucleoside an N-terminal-L-methionyl- a phosphate predicted ile O-acetyl-L-serine 6 37 linoleate a 3-oxohexacosanoyl- roseoflavin a 3-oxohexanoyl- a cis-delta17-3- cerotoyl-CoA an anion RS11235 an anion an L-asparaginyl- dehydrogenase: N -L-threonylcarbamoyladenosine semialdehyde chain fatty acid trans-polyprenyl- a ribonucleic acid L-cysteinyl-[protein] L-methionyl-L- a protein oxodocosanoyl- oxotetracos- ABC efflux methionine methionine JAN01S_RS07915 (decyclizing): triphosphate [acp] [acp] oxo-C36:1-[acp] monoester Asn 3-dehydroquinate -modified tRNA biosynthesis methylmalonate- acyl-CoA long-chain fatty 1,4-benzoquinol methionine seryl-[protein] [acp] bifunctional riboflavin 5-enoyl-[acp] acetyl-/propionyl- [tRNA ] JAN01S_RS04045 bifunctional DNA-directed methionine ATP-dependent 3-oxoacyl-ACP 3-oxoacyl-ACP 3-oxoacyl-ACP 3-oxoacyl-ACP 3-oxoacyl-ACP alkaline thiol transporter thiol cysteine synthase: synthase: synthase: D-glyceraldehyde JAN01S_RS10565 L-alanine dehydratase: Carboxylate Degradation semialdehyde synthetase: acid--CoA ligase: aminopeptidase: reductase: reductase: kinase/FMN reductase: reductase: reductase: CoA carboxylase peptidyl-tRNA glutamate JAN01S_RS07430 JAN01S_RS01605 3-phosphate demethylmenaquinone RNA polymerase aminopeptidase: Clp protease phosphatase: of a thiol biosynthesis III JAN01S_RS15665 JAN01S_RS11835 5-deoxy-D- dehydrogenase JAN01S_RS06200 JAN01S_RS08870 JAN01S_RS11390 adenylyltransferase: subunit alpha: dehydrogenase: thr methyltransferase/2- subunit omega: JAN01S_RS11390 proteolytic subunit: JAN01S_RS00325 JAN01S_RS00325 JAN01S_RS00325 JAN01S_RS00325 JAN01S_RS00325 JAN01S_RS06235 Mg 2+ RS07475 Mg 2+ group [+ 2 isozymes] hydrolase: glucuronate JAN01S_RS13415 JAN01S_RS05650 (CoA acylating): [+ 5 isozymes] [+ 5 isozymes] [+ 2 isozymes] JAN01S_RS01840 JAN01S_RS02655 JAN01S_RS07055 met 3-dehydroshikimate threonylcarbamoyl- propanoyl-CoA methoxy-6-polyprenyl-1,4- JAN01S_RS16135 [+ 2 isozymes] a (3R)-3-[+ 5 isozymes] a (3R)-3-[+ 5 isozymes] a (3R)-3-[+ 5 isozymes] a (3R,5Z)-3-[+ 5 isozymes] a cis-delta17-3-[+ 5 isozymes] [+ 3 isozymes] adenosylhomocysteinase: pyruvate decarboxylation to acetyl CoA 5-deoxy-glucuronate JAN01S_RS10590 an N-terminal L- an N-terminal roseoflavin nitrate RS03130 nitrate cys AMP synthase: degradation II propanoyl CoA D-gluconate a very-long-chain benzoquinol methylase: [+ 3 isozymes] [+ 3 isozymes] an alcohol [+ 2 isozymes] cys Glu isomerase: AMP diphosphate AMP diphosphate linoleoyl-CoA met met hydroxyhexacosanoyl- hydroxydocosanoyl- 5'-phosphate hydroxyhexanoyl- hydroxytetracos- hydroxyC36:1- 2-carboxy- cysteine desulfurase: asn JAN01S_RS10795 JAN01S_RS13720 degradation I degradation H + NADH hydrogencarbonate propanoyl-CoA fatty acyl-CoA JAN01S_RS03685 cysteinyl-[protein] L-seryl-[protein] shikimate a 6-methoxy-3-methyl- a ribonucleic acid a peptide a peptide [acp] [acp] [acp] 5-enoyl-[acp] [acp] cerotoyl-CoA 2+ 2+ JAN01S_RS07965 a [pyruvate dehydrogenase JAN01S_RS10560 Mg RS04805 Mg SAH dehydrogenase: threonylcarbamoyl- propanoyl-CoA 2-all-trans-polyprenyl- E2 protein] N 6 pyruvate-lipoyl-L-lysine D-gluconate 5-dehydro- [+ 3 isozymes] JAN01S_RS06905 propanoyl-CoA lactate RS04000 lactate AMP synthase: acyl-CoA oxidase: 2-deoxy-D- 1,4-benzoquinol ala Fermentation acetyl-/propionyl- dehydrogenase gluconate kinase: JAN01S_RS16630 JAN01S_RS07560 dihydrolipoyl gluconate Fatty Acid and Lipid Biosynthesis shikimate CoA carboxylase (acetyl-transferring) JAN01S_RS15990 2+ 2+ L-threonylcarbamoyladenylate acryloyl-CoA dehydrogenase: pyruvate D-gluconate Co RS01055 Co E1 component 5-dehydro-2- a [2-oxoglutarate- an N-terminal- 1402 a (7Z)-3-oxo- an (11Z)-3- pyruvate fermentation to propanoate I subunit alpha: long chain an N-terminal-L-methionyl- a 3-oxohexadecanoyl- a cytidine a cis-delta15-3- 6 JAN01S_RS13460 6-phosphate deoxygluconokinase: 7-hydroxylaurate 1-myristoylglycerol D-glucopyranose glycerophosphoserine oleoyl-CoA H O cholesterol stearate biosynthesis CDP-diacylglycerol biosynthesis III shikimate kinase: N -L- subunit alpha: dehydrogenase a sulfurated a myristoyl-[acp] L-threonyl-[protein] L-methionyl-L- roseoflavin in 16S rRNA 2 hexadec-7- oxooctadec- his cyanate RS10160 cyanate fatty acid elongation -- saturated JAN01S_RS02655 SAM 3-phosphate polyphosphate ATP [acp] oxo-C34:1-[acp] gondoate biosynthesis biotin-carboxyl carrier threonylcarbamoyladenine dihydrolipoyl JAN01S_RS12945 JAN01S_RS10550 E2 protein] N 6 - [sulfur carrier] long-chain fatty polyphosphate glycerophosphodiester methionine alanyl-[protein] 5'-phosphate 16S rRNA acyl-CoA enoyl-[acp] 11-enoyl-[acp] cholesterol oxidase: Nucleoside and Nucleotide Biosynthesis II (bacteria and plants) JAN01S_RS06895 [+ 2 isozymes] 1-acyl-sn-glycerol- methionine 3-oxoacyl-ACP beta-ketoacyl- 3-oxoacyl-ACP 3-oxoacyl-ACP (anaerobic) protein assembly oxaloacetate (S)-methylmalonyl- dehydrogenase: 5-dehydro- acid--CoA ligase: thioesterase: JAN01S_RS03900 L-histidine N(alpha) synthase: JAN01S_RS04530 octanoyl-L-lysine lipoyl synthase: 3-phosphate glucokinase: phosphodiesterase: aminopeptidase: aminopeptidase: bifunctional riboflavin reductase: (cytidine(1402)-2'-O) ACP reductase: reductase: reductase: predicted DHAP 6 2-deoxy-D- shikimate 3- an N -L- 3-hydroxypropanoyl- CoA JAN01S_RS14230 JAN01S_RS08870 JAN01S_RS11400 JAN01S_RS06475 JAN01S_RS11390 kinase/FMN -methyltransferase: JAN01S_RS00915 cholesterol oxidase: -methyltransferase: ABC an acetoacetyl-[acp] a [biotin carboxyl- JAN01S_RS14195a [2-oxoglutarate acyltransferase: JAN01S_RS11390 JAN01S_RS00325 JAN01S_RS08030 JAN01S_RS00325 JAN01S_RS00325 2+ 2+ chloride RS14805 chloride superpathway of pyrimidine a palmitoyl-[acp] an acyl-[acyl- phosphate 37 malate gluconate 6- JAN01S_RS04135 Co Co superpathway of pyrimidine guanine and adenine and a malonyl-[acp] an oleoyl-[acp] carrier protein]-L-lysine threonylcarbamoyladenine CoA methylmalonyl- a [pyruvate dehydrogenase [+ 5 isozymes] polyphosphate [+ 2 isozymes] [+ 2 isozymes] adenylyltransferase: JAN01S_RS03570 [+ 2 isozymes] JAN01S_RS04360 transporter superpathway of guanosine superpathway of adenosine 3-oxo-stearoyl- glycerol-3- carrier protein] dehydrogenase: phosphate an unsulfurated dehydrogenase JAN01S_RS04325 [+ 2 isozymes] a (3R)-3-[+ 5 isozymes] a 2'-O- a (3R,7Z)-3-[+ 5 isozymes] a (3R,11Z)-3-[+ 5 isozymes] a cis-delta15-3-[+ 5 isozymes] deoxyribonucleotides de novo biosynthesis a [pyruvate dehydrogenase E2 6 5'-deoxyadenosine met cholest-4- nucleobases salvage (11Z)-3-oxo- 3-phosphoshikimate 1- in tRNA 3-hydroxyisobutyryl- CoA epimerase: 6 dimyristoyl sn-glycerol an N-terminal L- an N-terminal L- JAN01S_RS13415 1402 of Co2+ nucleotides de novo biosynthesis I nucleotides de novo biosynthesis I guanosine salvage adenosine salvage I [acp] synthase: phosphate biotin--[acetyl-CoA- 6 E2 protein] N -S- [sulfur carrier] E2 protein] N 7-hydroxylauroyl- glucokinase: roseoflavin adenine methylcytidine oleate hercynine methylmalonyl-CoAJAN01S_RS10220 protein] N -dihydrolipoyl-L-lysine AMP diphosphate acyl-carrier protein ser met met hydroxyhexadecanoyl- hydroxy-hexadec- hydroxyoctadec- hydroxyC34:1- en-3-one icos-11-enoyl- carboxyvinyltransferase: CoA hydrolase: JAN01S_RS08350 acetyldihydrolipoyl-L-lysine phosphatidate JAN01S_RS01885 3-phosphate threonyl-[protein] alanyl-[protein] uracil JAN01S_RS11540 dehydrogenase: carboxylase] ligase: -lipoyl-L-lysine CoA dinucleotide [acp] in 16S rRNA 7-enoyl-[acp] 11-enoyl-[acp] [acp] gln hydrogencarbonate a 3-oxooctadecanoyl- [acp] synthase: JAN01S_RS13995 carboxyltransferase: long chain D-glucopyranose Cd 2+ RS08520 Cd 2+ JAN01S_RS01330 JAN01S_RS02530 (S)-methylmalonyl- JAN01S_RS11715 (R)-methylmalonyl- predicted bifunctional pyr operon guanosine adenosine 5-enolpyruvoyl- JAN01S_RS02535 (S)-malate IMP IMP asp [acp] an (11Z)-3-JAN01S_RS11540 a [biotin carboxyl- CoA CoA polyphosphate 6-phosphate ABC transcriptional regulator/uracil purine-nucleoside purine-nucleoside sn-glycerol a 3-oxoacyl-[acp] shikimate 3- 3-hydroxypropanoate Peptide Peptide carbamoyl 3-oxoacyl-ACP an acyl phosphate oxo-icos-11- carrier protein]-N 3-oxopropanoate transporter phosphoribosyltransferase: methylmalonyl- class II fumarate methylmalonyl- phosphate synthase inosine 5- phosphorylase: phosphorylase: 3-phosphate enoyl-[acp] 6 phosphate lipoate reductase: -biotinyl-L-lysine Glycolysis hydratase: CoA mutase: acetate conversion of a peptide adenylosuccinate JAN01S_RS06815 JAN01S_RS02675 JAN01S_RS02675 beta-ketoacyl- CoA epimerase: acetyltransferase: a [pyruvate a Chi-site containing 2-phospho-4-(cytidine 5'- an [amino group carrier protein]- an N-terminal- 1402 a (6Z)-3- allantoin RS05960 allantoin large subunit: carB monophosphate JAN01S_RS00325 chorismate acetyl-CoA an (L-cysteinylglycine) a cytidine (7Z)- 1-oleyl-2-lyso- synthetase: JAN01S_RS08350 JAN01S_RS12895 JAN01S_RS06760 to acetyl-CoA 1-myristoylglycerol γ a purine a 3-oxodecanoyl- a cis-delta13-3- uracil guanine adenine acyl-phosphate ACP reductase: synthase: JAN01S_RS14225 malonate DHAP dehydrogenase a sulfurated a palmitoleoyl-[acp] double stranded RecA diphospho)-2-C-methyl-D-erythritol C-terminal- -(L-glutamate 5- L-methionyl-L- -S-conjugate a protein in 16S rRNA hexadecenoyl-CoA oxooctadec- phosphatidate cys [+ 2 isozymes] dehydrogenase: [+ 5 isozymes] SAM 3-phosphate [acp] oxo-C32:1-[acp] Peptide RS12045 Peptide JAN01S_RS14455 phosphoribosyltransferase: JAN01S_RS08030 glycolysis III (from glucose) [+ 2 isozymes] semialdehyde E2 protein] N 6 - [sulfur carrier] DNA with a blunt end 2-C-methyl-D- semialdehyde-2-yl)-L-glutamate ribonucleoside valyl-[protein] aminopeptidase N: 16S rRNA acyl-CoA 6-enoyl-[acp] 1-acyl-sn-glycerol- JAN01S_RS08115 a (3R)-3- glycerol 3- beta-ketoacyl- JAN01S_RS06900 (R)-methylmalonyl- 1-acyl-sn-glycerol- exodeoxyribonuclease N-acetyl-gamma- methionine trypsin: 3-oxoacyl-ACP 3-oxoacyl-ACP 3-oxoacyl-ACP a [biotin carboxyl- fumarate 3-oxopropanoate acetate erythritol 2,4- purine-nucleoside dehydrogenase: cystathionine carbamoyl phosphate asp JAN01S_RS06695 hypoxanthine adenine phosphate [+ 5 isozymes] CoA succinyl-CoA dehydrogenase: octanoyl-L-lysine lipoyl synthase: 3-phosphate V subunit beta: glutamyl-phosphate aminopeptidase: JAN01S_RS03890 JAN01S_RS12065 (cytosine(1402)-N(4) reductase: reductase: reductase: 3-phosphate choline RS08730 choline IMP dehydrogenase: adenylo-succinate hydroxyoctadecanoyl- ACP reductase: carrier-protein dimer]- acetyl-coenzyme phosphorylase: beta-synthase: UMP phosphoribosyltransferase: phosphoribosyltransferase: a (3R,11Z)-3- chorismate JAN01S_RS10590 cyclodiphosphate aminopeptidase N: )-methyltransferase: JAN01S_RS15925 acyltransferase: [acp] acyltransferase: JAN01S_RS08030 6 D-glucopyranose methylmalonyl- malonate JAN01S_RS14195 a [pyruvate acyltransferase: JAN01S_RS07435 reductase: JAN01S_RS11390 trypsin: JAN01S_RS00325 JAN01S_RS00325 JAN01S_RS00325 JAN01S_RS04455 β N -biotinyl-L-lysine A synthetase: synthase: JAN01S_RS02675 JAN01S_RS13105 a reduced adenylosuccinate JAN01S_RS09475 JAN01S_RS01990 JAN01S_RS12335 -ketoacyl- hydroxy-icos- JAN01S_RS11135 α-D-ribose- JAN01S_RS10355 4 JAN01S_RS02150 [+ 11 isozymes] JAN01S_RS04325 cytidylate kinase: [+ 5 isozymes] CoA mutase: semialdehyde JAN01S_RS14185 an unsulfurated dehydrogenase JAN01S_RS043251-myristoyl-2- a double stranded[+ 2DNA isozymes] an [amino group carrier protein]- [+ 2 isozymes] JAN01S_RS00745 an N - a (3R)-3-[+ 5 isozymes] a (3R,6Z)-3-[+ 5 isozymes] a cis-delta13-3-[+ 5 isozymes] H O c-type acetyl-CoA carboxyl glucokinase: 5'-deoxyadenosine met JAN01S_RS05325 a purine base (2E,7Z)- dioleoyl 2 aspartate lyase: ACP synthase: 11-enoyl-[acp] 6 1-phosphate an N-terminal an L-cysteine- 1402 XMP JAN01S_RS01930 acyl-phosphate JAN01S_RS06760 dehydrogenase: acetyl-CoA acetyl-CoA [sulfur carrier] E2 protein] N acyl-carrier protein palmitoleoyl with a RecA protein C-terminal-γ-(5-phospho- met gly a peptide a peptide methylcytidine hydroxydecanoyl- hydroxyoctadec- hydroxyC32:1- lanthionine cytochrome carbamoyltransferase: GMP AMP JAN01S_RS11540 transferase: biotin carboxylase: JAN01S_RS08840 2-C-methyl-D-erythritol- L-valyl-[protein] S-conjugate hexadecenoyl-CoA phosphatidate RS08945 an oxidized hemin RS12570 hemin JAN01S_RS11690 a (3R)-3- JAN01S_RS10590 -lipoyl-L-lysine CMP L-glutamyl)-L-glutamate in 16S rRNA UMP kinase: glycerol 3- a 2,3,4-saturated JAN01S_RS15350 JAN01S_RS02280 [+ 2 isozymes] phosphatidate loaded 3' overhang [acp] 6-enoyl-[acp] [acp] JAN01S_RS06810 a (2E)-octadec- hydroxyacyl-[acyl- glucokinase: 2,4-cyclodiphosphate O c-type xanthosine-5'- JAN01S_RS00830 phosphate Secondary Metabolite succinyl-CoA succinate 2 fatty acyl-[acp] [+ 3 isozymes] JAN01S_RS08845 acytochrome reduced CMP phosphorylation 2-enoyl-[acp] carrier protein] Biosynthesis acetyl-CoA phosphate:L- AMP UDP acyltransferase: a (2E,11Z)-icosa- a [carboxyl-carrier H O c-type D-glucopyranose 2 K + RS14385 K + N-carbamoyl-L-aspartate glutamine amido- steroyl-[acp] JAN01S_RS08825 2,11-dienoyl-[acp] protein dimer]-N 6 - Chlorinated Compound Degradation undecaprenyl-diphospho-N 1-cis- α,ω-9Z- a [protein]- (1S,2R)-1- an N-terminal- a (3R,5Z)-3- a double- cytochrome CMP myo-inositol biosynthesis 6-phosphate 1-palmitoylglycerol a [glutamine- a cis-delta11-3- RS08950 an oxidized ligase (AMP-forming) nucleoside-diphosphate reductase: acyl-CoA hydrolysis -acetylmuramoyl-L-alanyl-γ- UDP-N-acetyl-α-D-glucosamine a [protein]-L-lysine C-(indol-3- L-methionyl- a protein 2,3-DHP palmitoleoyl-CoA hydroxy-tetradec- oxaloacetate carboxybiotinyl-L-lysine Carbohydrate Degradation a palmitoleoyl-[acp] vaccenoylglycerol- a myristoyl-[acp] octadecenedioate L-glutamine synthetase]- ATP helix DNA a protein adenylate kinase: kinase: JAN01S_RS13495 cytidylate kinase: a 1-acyl-sn (2E,11Z)-icosa- glucose-6-phosphate propionyl- 3-phosphate ser oxo-C30:1-[acp] O c-type : JAN01S_RS04345 JAN01S_RS08035 D-glutamyl-L-lysyl- D-alanine 3-phosphate acyl-CoA transglutaminase: yl)glycerol glycyl-[protein] proteasome 3-(2,3- acyl-CoA 5-enoyl-[acp]beta-ketoacyl- DNA helicase: 3-oxoacyl-ACP citrate synthase/ 2 dihydroorotase: JAN01S_RS04920 JAN01S_RS01930 2,11-dienoyl- D-glucopyranose CoA:succinate 4,5-dichlorocatechol degradation undecaprenyldiphospho- 1-acyl-sn-glycerol- 1-acyl-sn-glycerol- methionine L-tyrosine glutamine-synthetase cytochrome UTP -glycerol 3- a 2,3,4-saturated isomerase: synthetase: JAN01S_RS04170 3-phosphate tryptophan synthase dihydroxyphenyl) dehydrogenase: JAN01S_RS04705 methylcitrate proteasome biotin RS02840 biotin 2+ 2+ CDP 6-phosphate muramoylpentapeptide beta-N- 3-phosphate 3-phosphate aminopeptidase: subunit alpha: ACP reductase: reductase: Mo RS15950 Mo JAN01S_RS06805 a stearoyl-[acp] phosphate [acp] reductase: inositol-3-phosphate JAN01S_RS07905 CoA transferase: heparin degradation adenylyltransferase: ATPase: GMP fatty acyl CoA chitin degradation II (Vibrio) sucrose degradation III (sucrose invertase) Entner-Doudoroff JAN01S_RS06200 transglutaminase: subunit beta: JAN01S_RS07365 propionate JAN01S_RS15925 JAN01S_RS08030 DNA helicase PcrA: JAN01S_RS00325 synthase: CTP synthetase: JAN01S_RS08035 acyl-CoA JAN01S_RS13590 4,5-dichlorobenzene- acetylglucosaminyltransferase: acyltransferase: acyltransferase: JAN01S_RS11390 a [glutamineJAN01S_RS11050 nucleoside- 1-acyl-sn-glycerol- synthase: JAN01S_RS03345 dioxygenase: mhpB JAN01S_RS10310 JAN01S_RS07415 (S)-dihydroorotate ADP JAN01S_RS06975 thioesterase: F6P pathway I 1,2-diol JAN01S_RS02190 JAN01S_RS04325 JAN01S_RS04325 [+ 5 isozymes] a protein withJAN01S_RS09200 an D-glyceraldehyde [+ 2 isozymes] synthetase]-O [+ 2 isozymes] (2Z,4E)-2-hydroxy- [+ 11 isozymes] [+ 5 isozymes] an unwound [+ 5 isozymes] JAN01S_RS12160 diphosphate kinase: 3-phosphate JAN01S_RS12225 heparin ditrans,octacis-undecaprenyldiphospho- 1-cis-vaccenoyl- 1-palmitoyl- ω (2E,9Z)- a (5Z)-3-oxo- a cis-delta11-3- (2S,3S)-2- -carboxy- 6 trp an N-terminal 4 a trans-2- a gondoyl-[acp] JAN01S_RS00915 chitin sucrose D-gluconate UDP N-acetyl-(N-acetylglucosaminyl)muramoyl- acyl-carrier protein 2-palmitoleoyl acyl-carrier protein 2-myristoyl N -(γ-glutamyl)- 3-phosphate met -(5'-adenylyl) a peptide a peptide 6-oxonona-2,4- tetradec-5- double- hydroxyC30:1- a peptide guanylate kinase: CTP JAN01S_RS13495 acyltransferase: Ins(3)P AMP diphosphate (9Z)-octadec- hexadecenoyl-CoA methylcitrate D-ribose RS10575 D-ribose dihydroorotate a 2,3,4-saturated long-chain fatty γ L-lysine crosslink glycyl-[protein] -L-tyrosine diene-1,9-dioate stranded DNA JAN01S_RS16130 JAN01S_RS04325 enoyl-[acyl- [+ 2 isozymes] 6-phosphate 2,3-dichloro- L-alanyl- -D-glutamyl-L-lysyl-D-alanine phosphatidate phosphatidate enoyl-[acp] [acp] oxidase: CTP fatty acyl-[acp] a 2,3,4-saturated phosphogluconate 9-enoyl-CoA ATP synthase ADP reductase: a 1,2-diacyl- carrier protein] acid activation 4-deoxy-2-O-sulfo- stearate fatty acid inositol invertase: cis,cis-muconate JAN01S_RS06790 subunit beta: JAN01S_RS09390 β Respiration β-L-erythro-hex-4- dehydratase: sn-glycerol 2,3,4-saturated fatty a long-chain monophosphatase: -D-fructose 1,6- JAN01S_RS13825 GDP JAN01S_RS08440 enopyranuronosyl-(1,4)-D-N JAN01S_RS01875 ectoine RS11565 ectoine long-chain fatty 3-phosphate fatty acid JAN01S_RS09720 bisphosphate a chitodextrin a 2-oxo an (S)-2- 3-benzyl-3,6 - 6-O-α-mycolyl- orotate PRPP acyl-[acp]:NAD+ KDGP 1-palmitoylglycerol 1-palmitoylglycerol 5'-deoxy-5'- a 3-oxotetracosanoyl- a 3-oxooctanoyl- [+ 6 isozymes] acid--CoA ligase: phosphatidate acyl-CoA 2-oxoisovalerate decarboxylation to isobutanoyl-CoA -sulfoglucosamine 6-O-sulfate decanoate glycerophosphoglycerol ethylphosphate a folate trehalose 6- oxidoreductase: β carboxylate a palmitoleoyl-[acp] a palmitoyl-[acp] halocarboxylate bis(cysteinylglycine) fluoroadenosine a decanoyl-[acp] GTP cys dADP synthetase: -D-fructofuranose D-glucopyranose 2-chloro-2-(2-chloro- 3-phosphate 3-phosphate [acp] [acp] orotate JAN01S_RS08870 cytidylyltransferase: myo-inositol class II fructose- iduronate sulfatase: 2-oxoacid:ferredoxin long-chain fatty glycerophosphodiester HAD family - 6-(hydroxymethyl) purine-nucleoside 3-oxoacyl-ACP dihydrofolate 3-oxoacyl-ACP phosphate JAN01S_RS08035 an [apo BCAA 2-keto-3- 1-acyl-sn-glycerol- 1-acyl-sn-glycerol- bifunctional RNase nucleoside- GDP reductase: JAN01S_RS00840 JAN01S_RS06200 JAN01S_RS07570 5-oxofuran-2-yl)acetate oxidoreductase acid--CoA ligase: phosphodiesterase: hydrolase: membrane phosphorylase: reductase: adenylate/guanylate trehalose- cystathionine phosphoribosyltransferase: [+ 5 isozymes] bisphosphate glucokinase: 3-phosphate 3-phosphate -diketopiperazine reductase: H/acid phosphatase: reductase: acyl-CoA oxidase: predicted diphosphate kinase: JAN01S_RS09390 superpathway of pyrimidine deoxyribonucleoside salvage [+ 5 isozymes] dehydrogenase deoxygluconate 6- dipeptidase: phosphatase: beta-synthase: JAN01S_RS15810 ATP nucleoside- a CDP- a long-chain aldolase: 4-deoxy-β-L-erythro-hex-4- JAN01S_RS08840 subunit beta: JAN01S_RS08870 JAN01S_RS10995 JAN01S_RS15225 JAN01S_RS02675 JAN01S_RS00325 JAN01S_RS14720 JAN01S_RS00325 cyclase domain- ABC E2 protein] N 6 branched-chain a chitodextrin phosphate aldolase: acyltransferase: acyltransferase: 3-benzyl-3,6 - JAN01S_RS11445 JAN01S_RS07560 JAN01S_RS13495 diphosphate kinase: stearoyl-CoA enopyranuronosyl-(1,4)-D-N JAN01S_RS03795 JAN01S_RS04385 5-fluoro-5- containing protein: JAN01S_RS05255 JAN01S_RS13105 ectoine ectoine orotate 2'-deoxycytidine diacylglycerol fatty acyl-CoA JAN01S_RS14470 glucokinase: a reduced JAN01S_RS04325 JAN01S_RS04325 [+ 5 isozymes] [+ 2 isozymes] [+ 3 isozymes] [+ 5 isozymes] [+ 4 isozymes] [+ 2 isozymes] [+ 5 isozymes] transporter -lipoyl-L-lysine alpha-keto acid JAN01S_RS01880 1-palmitoyl-2- an (R)-2- bis(cysteinyl)- 6- deoxy-D-ribose adenine a (3R)-3- a (3R)-3- α, α'-trehalose JAN01S_RS13495 -sulfoglucosamine 6-O-sulfate + dipalmitoyl sn-glycerol gly a (2E)-dec- JAN01S_RS02525 phosphoribosyltransferase: JAN01S_RS08845 H ferredoxin [iron- CO an acyl-CoA glycerol a halide anion ethanol a 7,8-dihydrofolate α ser of ectoine dihydrolipoyl dehydrogenase 5-chloro-trans 2 acyl-carrier protein palmitoleoyl acyl-carrier protein hydroxyacid (hydroxymethyl) 1-phosphate hydroxytetracosanoyl- hydroxyoctanoyl- 6- -mycolate dGDP pyruvate phosphatidate diphosphate AMP decanoyl-CoA 3-phosphate 2-enoyl-[acp] cyclic-GMP JAN01S_RS00120 cytidine deaminase: triose-phosphate dehydrogenase: subunit E2: D-glucopyranose -dienelactone sulfur] cluster phosphatidate -diketopiperazine [acp] [acp] GTP dATP JAN01S_RS02715 isomerase: JAN01S_RS13460 JAN01S_RS12955 6-phosphate lys RS03540 lys nucleoside- carboxymethylenebutenolidase: orotidine 5'-phosphate JAN01S_RS07875 beta- diphosphate kinase: dCMP Carbohydrate Biosynthesis D-glyceraldehyde dihydrolipoyl N,6-O-disulfo-D-glucosamine glucose-6-phosphate JAN01S_RS11005 2'-deoxyuridine DHAP 3-phosphate dehydrogenase: hexosaminidase: isomerase: [+ 2 isozymes] decaprenyl-diphospho-N- UDP-N-acetyl- 1-stearoyl- (25S)-3- 5'-chloro-5'- (5Z)- 1-cis- a D-5- a (5Z)-3- JAN01S_RS13495 cytidylate kinase: a cis- 1-palmitoylglycerol laurate a 3-oxotetradecanoyl- orotidine-5'- an [apo BCAA JAN01S_RS04525 acetylmuramoyl-pentapeptide α-D-glucosamine an oleoyl-[acp] sn-glycerol a purine 2-oxoglutarate oxocholest- coenzyme A 3',5'-ADP sulfite vaccenoylglycerol- monosubstituted oxododec- thr ala JAN01S_RS01930 UDP-N-acetyl-D- glyceraldehyde- JAN01S_RS14230 an [apo BCAA dehydrogenase N,N'- N,N',N''- JAN01S_RS07905 D-mannose degradation arsenate deoxyadenosine tetradecenoyl-CoA thymidine kinase: α UDP-α-D-galactose 5-chloromaleylacetate undecaprenyldiphospho- vaccenoyl-[acp] 3-phosphate ribonucleoside [acp] phosphate dTDP-L-rhamnose UDP- -D-glucose dehydrogenase 6 diacetylchitobiose triacetylchitotriose 3-phosphate long-chain fatty 2-oxoglutarate 4-en-26-oate acyl-CoA purine-nucleoside 3-oxoacyl-ACP phosphoadenosine acyl-CoA 3-phosphate hydantoin 5-enoyl-[acp]beta-ketoacyl- dGTP glucosamine biosynthesis I 3-phosphate E2 protein] N -S-[2- 1-acyl-sn-glycerol- 1-acyl-sn-glycerol- purine-nucleoside 1-acyl-sn-glycerol- decarboxylase: JAN01S_RS09705 dCDP biosynthesis I biosynthesis E2 protein] N 6 F6P muramoylpentapeptide beta-N- acid--CoA ligase: dehydrogenase phosphorylase: dehydrogenase: Asp/Glu/hydantoin L-threonine 3- biosynthesis I beta- D-mannopyranose 3-phosphate 3-phosphate synthetase: reductase: phosphosulfate 3-phosphate ACP reductase: alanine racemase: D-glucopyranose dehydrogenase: methylpropanoyl]dihydrolipoyl- phosphorylase: racemase: dehydrogenase: JAN01S_RS06780 thymidine α-D- -dihydrolipoyl- N-sulfo-D-glucosamine 6-phosphate acetylglucosaminyltransferase: JAN01S_RS08870 E1 component: JAN01S_RS06200 JAN01S_RS02675 JAN01S_RS00325 reductase: JAN01S_RS15925 JAN01S_RS08030 inosine-5'-phosphate biosynthesis I nucleoside- D-glucopyranose UDP-α-D-glucose JAN01S_RS07865 L-lysine hexosaminidase: acyltransferase: acyltransferase: JAN01S_RS02675 acyltransferase: JAN01S_RS04555 dUMP 6-phosphate L-lysine mannose-6- JAN01S_RS02190 JAN01S_RS07805 5-chloro-5- JAN01S_RS05630 JAN01S_RS13710 UMP diphosphate kinase: glucose-6-phosphate glucopyranose JAN01S_RS04525 acetoin degradation JAN01S_RS04325 JAN01S_RS04325 [+ 5 isozymes] (25S)-3- [+ 2 isozymes] [+ 5 isozymes] JAN01S_RS08000 [+ 11 isozymes] 1-cis-vaccenoyl-JAN01S_RS04325 an L-5- [+ 5 isozymes] 6-phosphate UDP-glucose phosphate (2Z,4Z)-2-chloro- decaprenyl-pyrophosphoryl- 1-stearoyl-2- 1-palmitoyl-2- ribose-1-arsenate a purine base adenine deoxyribose a (3R)-3- (2E,5Z)- a (3R,5Z)-3- thymidine kinase: isomerase: 1-phosphate phosphoglucomutase: NADH CO succinyl-CoA monosubstituted aminoacetone thymidylate JAN01S_RS13495 glucose-1-phosphate 4-epimerase: 13-DPG N-acetyl-D- UDP (N-acetylglucosamine)-N- acyl-carrier protein oleoyl-sn-glycerol acyl-carrier protein cis-vaccenoyl 2 oxocholest-4- hydroxytetradecanoyl- PAPS 2-palmitoleoyl hydroxydodec- D-ala cytidylate kinase: AIR JAN01S_RS00035 isomerase: 3-hydroxyhexa- AMP diphosphate lauroyl-CoA 1-phosphate tetradecenoyl-CoA synthase: JAN01S_RS09705 JAN01S_RS07905 glucosamine coenzyme A acetoin acetylmuramyl-(pentapeptide) en-26-oyl-CoA phosphatidate hydantoin JAN01S_RS01930 dCTP thymidylyltransferase: JAN01S_RS07635 JAN01S_RS05390 2,4-dienedioate 3-phosphate phosphatidate [acp] 5-enoyl-[acp] F6P phosphomannomutase/ phosphoglycerate 5-(carboxyamino)imidazole JAN01S_RS09050 JAN01S_RS07755 branched-chain D-glucosamine acetoin F6P UMP kinase: dTDP-α-D-glucose phosphoglucomutase: UDP-glucose ribonucleotide synthase: kinase: alpha-keto acid dehydrogenase: JAN01S_RS00830 L-glutamine--D- JAN01S_RS10770 4-epimerase: dTDP-glucose α Aminoacyl-tRNA Charging JAN01S_RS07870 JAN01S_RS00690 JAN01S_RS02505 fructose-6- -D-glucopyranose JAN01S_RS00045 dehydrogenase 2-amino-6-[1-hydroxyethyl]- a ring-opened 7- 1-cis- 1-stearoyl- an [amino group carrier protein]-C- 1-[18-hydroxyoleyl]- 1-cis- a (9Z)-3- UDP-α-D- a cis- an acyl-[acyl- propanoyl-CoA H O long chain cis-vaccenoyl-CoA a D-hexose UDP 4,6-dehydratase: 1-phosphate subunit E2: acetaldehyde acetyl-CoA (2Z)-5-chloro-4- MEP CTP 2 vaccenoylglycerol- 3-methylcatechol oxooctacos- asp adenine and phosphate 3-phospho-D-glycerate 7-methyl-7,8-dihydropterin methylguanine in DNA vaccenoylglycerol- sn-glycerol terminal-γ-(L-ornithyl)-L-glutamate 2-lyso-phosphatidate N5-CAIR galactose hydroxyhex-2-enedioate vaccenoyl-[acp] carrier protein] GTP polyphosphate glucokinase: dTMP superpathway of 5-aminoimidazole aminotransferase: JAN01S_RS07725 UTP--glucose- tRNA charging JAN01S_RS12955 2-amino-4-hydroxy-6- DNA- 3-phosphate 3-phosphate 2-C-methyl-D- acyl-CoA 1-acyl-sn-glycerol- acyl-CoA 3-phosphate 9-enoyl-[acp]3-oxoacyl-ACP adenosine salvage III GDP-mannose biosynthesis 1-acyl-sn-glycerol- 1-acyl-sn-glycerol- acetylornithine exopolyphosphatase: 1-acyl-sn-glycerol- catechol 2,3- ribonucleotide biosynthesis phosphoglycerate hydroxymethyldihydropteridine formamidopyrimidine GTP cyclohydrolase thioesterase: 3-phosphate dehydrogenase: aspartate JAN01S_RS08840 N5-carboxyaminoimidazole thymidylate kinase: JAN01S_RS04575 dTDP-glucose 1-phosphate glutaminyl-tRNA gln 3-phosphate 3-phosphate aminotransferase: erythritol 4-phosphate 3-phosphate dioxygenase: reductase: JAN01S_RS07325 aminotransferase: 4,6-dehydratase: uridylyltransferase: mutase: diphosphokinase: glycosylase: I FolE: cytidylyltransferase: JAN01S_RS00915 acyltransferase: JAN01S_RS15925 JAN01S_RS00325 glucokinase: ribonucleotide mutase: JAN01S_RS09560 D-glucosamine D-glucopyranose arginine-- biosynthesis via acyltransferase: acyltransferase: argD [+ 2 isozymes] acyltransferase: JAN01S_RS15585 nucleoside- adenine PRPP arg JAN01S_RS05365 JAN01S_RS09455 JAN01S_RS01260 an [amino group carrier protein]- 7,8- JAN01S_RS09465 JAN01S_RS04325 2-hydroxy- JAN01S_RS14490 JAN01S_RS08845 JAN01S_RS02500 6-phosphate JAN01S_RS07765 6-phosphate JAN01S_RS14395 tRNA ligase: transamidation [1-(2-amino-7-methyl-4-oxo- 2,6-diamino-4- JAN01S_RS04325 JAN01S_RS04325 JAN01S_RS05335 [+ 2 isozymes] 1-[18-hydroxyoeoyl]-2- [+ 11 isozymes] 1,2-dicis-JAN01S_RS04325 [+ 5 isozymes] diphosphate kinase: dTDP 2-oxoglutarate decarboxylation to succinyl-CoA 1,2-dicis- a 1-stearoyl 2- 4-(cytidine 5'- long chain (2E,11Z)- a cis-delta9-3- purine-nucleoside amidophosphoribosyltransferase: glucose-6-phosphate Amine and Polyamine Degradation 2-maleylacetate an apurinic site C-terminal-γ-(L-glutamate 5- dihydroneopterin formate propanoate 6-oxohepta- oxaloacetate D-hexose 6- asp phosphoglucosamine dTDP-4-dehydro- α JAN01S_RS13765 an L-arginyl- 2-phospho-D-glycerate 7,8-dihydro-3H-pteridin- hydroxy-5-(N-methyl) acyl-carrier protein vaccenoyl- acyl-carrier protein acyl-sn-glycerol diphospho)-2-C- [18-hydroxy-lioleoyl]-sn polyphosphate vaccenoyl- hydroxyC28:1- JAN01S_RS13495 CAIR nucleoside- phosphorylase: JAN01S_RS08255 isomerase: UDP- -D-glucose within DNA semialdehyde-2-yl)-L-glutamate 3'-triphosphate octadecenoyl-CoA 2,4-dienoate phosphate 6-deoxy-α-D- Arg Glu 6-yl)]ethyl diphosphate formamidopyrimidine methyl-D-erythritol -glycerol 3-phosphate phosphatidate 5-phospho-β- mutase: JAN01S_RS07905 [tRNA ] a [2-oxoglutarate phosphatidate 3-phosphate [acp] dUDP diphosphate kinase: JAN01S_RS02675 Arg 4-aminobutanoate D-ribosylamine JAN01S_RS05020 glucopyranose a tRNA enolase: dehydrogenase JAN01S_RS13495 adenosine F6P putrescine degradation IV urea degradation I 4-aminobutanoate putrescine degradation I nucleoside- phosphoribosylaminoimidazolesuccinocarboxamide dTDP-4- JAN01S_RS13135 E2 protein] N 6 degradation I gln phosphoribosylamine- D-glucosamine 2-oxoglutarate a 1-alkyl-sn a [protein]- diphosphate kinase: an L-glutamyl- degradation III 6-(hydroxymethyl) an L-phenylalanyl- (S)-4-hydroxy- (7Z)- 1-palmitoylglycerol a nucleoside synthase: JAN01S_RS14990 dTTP 1-phosphate dehydrorhamnose mannose-6- -lipoyl-L-lysine 3-oxoadipate an N-terminal [DNA] a [protein]-L-glutamine serotonin succinyl-CoA acetoacetate a [protein] Ser/Thr stearoyl-CoA H O π UTP adenosine deaminase: -glycine ligase: Gln dehydrogenase 2 -glycerol 3- Ins(1)P N -phospho- JAN01S_RS13495 3,5-epimerase: phosphate [tRNA ] phosphoenolpyruvate 4-aminobutanoate putrescine urea putrescine dGTP -7,8-dihydropterin [tRNA Phe ] arginyl-[protein] ATP H O 2-oxopentanoate tetradecenoyl-CoA 3-phosphate diphosphate JAN01S_RS15015 2-oxoglutarate E1 component: 2 JAN01S_RS06270 UDP-N- 4-aminobutyrate 4-aminobutanoate 2-amino-4-hydroxy-6- leucyl/phenylalanyl- exodeoxyribonuclease transglutaminase: succinyl-CoA-- 4-hydroxy-2- serine/threonine acyl-CoA acyl-CoA 1-acyl-sn-glycerol- phosphate1-acyl-sn-glycerol- L-histidine JAN01S_RS07760 isomerase: α glutamyl-tRNA dehydrogenase deoxyguanosinetriphosphate ATPase: nucleoside- inositol histidine CTP synthetase: dUTP SAICAR adenosine deaminase: acetylglucosamine UDP- -D-glucuronate cysteine-- JAN01S_RS07805 4-aminobutyrate hydroxymethyldihydropteridine III: JAN01S_RS04035 JAN01S_RS04170 3-ketoacid-CoA oxovalerate protein kinase: thioesterase: dehydrogenase: 3-phosphate GAR dTDP-4-dehydro- JAN01S_RS05390 cys amidotransferase: pyruvate kinase: aminotransferase: tRNA--protein diphosphate kinase: 3-phosphate monophosphatase: phosphatase: JAN01S_RS06975 biosynthesis (from tRNA ligase: E1 component: triphosphohydrolase: JAN01S_RS15745 JAN01S_RS15725 JAN01S_RS00915 JAN01S_RS15925 dUTPase: JAN01S_RS02700 diphosphorylase/ JAN01S_RS03380 JAN01S_RS05610 aminotransferase: diphosphokinase: transferase: exodeoxyribonuclease transglutaminase: transferase: aldolase: acyltransferase: acyltransferase: β-L-rhamnose D-mannopyranose JAN01S_RS06535 JAN01S_RS07805 succinate urea-1-carboxylate 4-aminobutanal JAN01S_RS08600 [+ 7 isozymes] JAN01S_RS13495 JAN01S_RS09720 JAN01S_RS07090 adenylosuccinate lyase: xanthine and glucosamine-1- UDP-glucose) JAN01S_RS05280 an L-cysteinyl- JAN01S_RS05610 JAN01S_RS09455 III: JAN01S_RS00145 JAN01S_RS09200 JAN01S_RS02460 JAN01S_RS12425 [+ 4 isozymes] [+ 2 isozymes] [+ 11 isozymes] JAN01S_RS04325 JAN01S_RS09725 JAN01S_RS08960 6 JAN01S_RS04325 dTDP-4- 6-phosphate [+ 3 isozymes] semialdehyde succinate (7,8-dihydropterin- a 2'- + 1-palmitoyl- a nucleoside a 2-acyl-1-alkyl- [+ 2 isozymes] CTP JAN01S_RS11690 xanthosine salvage inosine phosphate N- UDP-α-D-glucose [tRNA Cys ] [+ 2 isozymes]a [2-oxoglutarate a [2-oxoglutarate 4-aminobutanal 2'-deoxyguanosine PPP L-phenylalanyl-L- a [protein] N -[(5-hydroxy-1H H phosphate ADP a [protein] (L-serine/L- (2E,7Z)- myo-inositol [+ 2 isozymes] pyruvate allophanate semialdehyde gamma- i 6-yl)methyl a tRNA Phe acetoacetyl-CoA succinate pyruvate acetaldehyde stearate 2-myristoyl sn-glycerol a [protein]- dehydrorhamnose Cys deoxyribonucleoside [DNA] -indol-3-yl)ethyl]-L-glutamine tetradecenoyl-CoA triphosphate acetyltransferase: phosphomannomutase: UDP-glucose 6- a tRNA an L-glutaminyl- dehydrogenase dehydrogenase NAD-dependent arginyl-[protein] threonine) phosphate L-histidine hydrolase: aminobutyraldehyde diphosphate 5'-monophosphate phosphatidate 3-phosphate dUMP AICAR reductase: JAN01S_RS02680 Gln 6 6 succinate- purine-nucleoside FGAR JAN01S_RS07085 dehydrogenase: [tRNA ] E2 protein] N E2 protein] N -S- succinate- dehydrogenase: JAN01S_RS07760 gamma- JAN01S_RS01810 semialdehyde xanthosine α phosphomannomutase/ JAN01S_RS02490 -dihydrolipoyl- succinyldihydrolipoyl- semialdehyde thymidylate bifunctional phosphorylase: N-acetyl- -D- β UDP-α-D- JAN01S_RS00875 CDP dTDP- -L- aminobutyraldehyde allophanate dehydrogenase: a dimer of 38- a [protein]- synthase: nucleosidase: JAN01S_RS02675 phosphoribosylformylglycinamidine glucosamine phosphoglucomutase: L-lysine L-lysine dehydrogenase: 3E,5Z- D-glyceraldehyde D-firefly a uridine 1-palmitoylglycerol 4-cis- phosphoribosylaminoimidazolecarboxamide glucuronate α-linolenate phytenate an L-phenylalanyl- an N-terminal pyruvate H O L(or D)-O- τ rhamnose dehydrogenase: hydrolase: JAN01S_RS00895 4-aminobutanoate isovalerate 3'-dephospho- non-adjacent NADH 2 Ins(2)P N -phospho- JAN01S_RS09050 JAN01S_RS12910 synthase II: JAN01S_RS14960 1-phosphate JAN01S_RS10770 JAN01S_RS05605 1-pyrroline Phe tetradecadienoyl-CoA 3-phosphate ATP luciferyl-CoA 40 in tRNA 3-phosphate undecenoyl-CoA formyltransferase/inosine monophosphate JAN01S_RS00875 JAN01S_RS01815 [tRNA ] L-lysyl-[protein] phosphoserine [+ 2 isozymes] α gln acyl-CoA synthetase: acyl-CoA synthetase: acetyl-coenzyme acyl-CoA 1-deoxy-D-xylulose- CoA thymidines in DNA NADH acyl-CoA tRNA 1-acyl-sn-glycerol- L-histidine cyclohydrolase: JAN01S_RS10240 purine-nucleoside hypoxanthine UDP-N- -D-mannose NAD-dependent succinate leucyl/phenylalanyl- dephospho- inositol histidine dTMP JAN01S_RS06200 JAN01S_RS06200 A synthetase: thioesterase: 5-phosphate deoxyribodipyrimidine pyrophosphatase: pseudouridine(38- acyl-CoA oxidase: phosphoserine phosphorylase: 1-phosphate succinate- ammonium tRNA--protein thioesterase: 3-phosphate dCDP FGAM acetylglucosamine PRPP biosynthesis I an L-glutaminyl- 2-oxoglutarate CoA kinase: photolyase: JAN01S_RS07560 phosphatase SerB: monophosphatase: phosphatase: thymidylate kinase: 4-aminobutanoate [+ 5 isozymes] [+ 5 isozymes] JAN01S_RS14185 JAN01S_RS04065 synthase: JAN01S_RS04665 JAN01S_RS04065 40) synthase TruA: acyltransferase: FAICAR JAN01S_RS02675 hypoxanthine diphosphorylase/ Gln dehydrogenase semialdehyde transferase: JAN01S_RS03515 JAN01S_RS09720 JAN01S_RS07090 nucleoside- xanthine [tRNA ] JAN01S_RS09780 JAN01S_RS04150 reduced β- JAN01S_RS04990 2-trans, 4-cis- JAN01S_RS08040 JAN01S_RS09560 Gln [+ 2 isozymes] [+ 2 isozymes] JAN01S_RS04325 phosphoribosyltransferase: glucosamine-1- E1 component: dehydrogenase: JAN01S_RS08960 + 38- 1-palmitoyl-2- diphosphate kinase: phosphoribosylformylglycinamidine D-ribose 5- a tRNA AMP diphosphate α-linolenoyl-CoA diphosphate AMP phytenoyl-CoA isovaleryl-CoA AMP diphosphate (3E,5Z)- 1-deoxy-D-xylulose ADP coenzyme A H nicotinamide D- AMP a pseudouridine [+ 2 isozymes] bifunctional Phe L-phenylalanyl- coenzyme A a thymine in DNA D-firefly luciferin undecadienoyl- myo-inositol a [protein]- dTDP JAN01S_RS09475 phosphate N- phosphate JAN01S_RS07805 JAN01S_RS00895 a tRNA 5-phosphate palmitoleoyl serine JAN01S_RS13495 phosphoribosylaminoimidazolecarboxamide cyclo-ligase: JAN01S_RS08250 GDP-α-D- ribose-phosphate L-lysyl-[protein] tetradecadienoate ribonucleotide 40 in tRNA CoA phosphatidate L-histidine acetyltransferase: mannose formyltransferase/inosine monophosphate pyrophosphokinase: succinate dCTP nucleoside- IMP AIR JAN01S_RS07085 cyclohydrolase: JAN01S_RS10240 JAN01S_RS07080 diphosphate kinase: UDP-N-acetyl- Nucleoside and Nucleotide Degradation PRPP sn-glycero-3- a double S-(hydroxymethyl) 4-trans- a uracil 1498 a [protein]- XMP α Glu protoporphyrin IX Mg 2+ an unsulfurated F6P an acyl-CoA H O 1-palmitoylglycerol JAN01S_RS13495 -D-glucosamine pyruvate 2-methylbutanoate cys a purine 2'- phosphoenol 2 homogentisate N-phospho- phosphoethanolamine stranded DNA dGDP mycothiol 3-phosphate undecenoyl-CoA in 16S rRNA IMP superpathway of pyrimidine [sulfur carrier] pyruvate, acetyl-coenzyme glycerophosphodiester exodeoxyribonuclease magnesium chelatase: cysteine desulfurase: deoxyribonucleoside pyrophosphate-- pyruvate acyl-CoA S-(hydroxymethyl) 1-acyl-sn-glycerol- 16S rRNA L-histidine an L-glutamyl- superpathway of purine deoxyribonucleosides degradation purine-nucleoside homogentisate histidine dTTP deoxyribonucleosides degradation phosphate dikinase: A synthetase: phosphodiesterase: V subunit beta: JAN01S_RS01830 fructose-6-phosphate thioesterase: mycothiol acyl-CoA oxidase: (uracil(1498)-N(3))- [tRNA Glu ] JAN01S_RS09065 pyruvate kinase: 3-phosphate 1,2-dioxygenase: Metabolic Regulator Biosynthesis phosphorylase: JAN01S_RS07560 phosphatase: a tRNA glu 2'-deoxycytidine JAN01S_RS00570 JAN01S_RS14185 JAN01S_RS06475 JAN01S_RS07435 magnesium chelatase: [+ 3 isozymes] 1-phosphotransferase: JAN01S_RS03380 JAN01S_RS04065 dehydrogenase: acyltransferase: methyltransferase: JAN01S_RS02425 2-deoxy-α- JAN01S_RS02675 JAN01S_RS07090 [+ 2 isozymes] [+ 2 isozymes] JAN01S_RS01030 a sulfurated JAN01S_RS06580 [+ 2 isozymes] JAN01S_RS05295 JAN01S_RS04325 2-trans, 4-trans 3 JAN01S_RS08760 phosphoenol + 2-methylbutanoyl- ala β-D-fructose 1,6- 1-palmitoyl-2- an N - 4-maleyl- [+ 2 isozymes] ppGpp biosynthesis 2'-deoxyguanosine diphosphate AMP H AMP diphosphate sn-glycerol [sulfur carrier] D-ribose 1- a purine base dGTP pyruvate -undecadienoyl- trehalose biosynthesis I cytidine deaminase: pyruvate CoA ethanolamine a 5'-phosphooligonucleotide Mg-protoporphyrin a carboxylate S-formylmycothiol cis-vaccenoyl methyluracil 1498 acetoacetate a [protein]- mannosylglucosylglycerate glucosylglycerate phosphate bisphosphate Amine and Polyamine Biosynthesis 2'-deoxyadenosine 3-phosphate CoA L-histidine biosynthesis I biosynthesis I JAN01S_RS02715 phosphatidate in 16S rRNA pppGpp D-glucopyranose UDP-α-D-glucose isoleucine-- thymidine 3-phospho- ile 2'-deoxyuridine ectoine biosynthesis 3-phospho-D-glycerate UDP-α-D-glucose GDP-α-D-glucose 6-phosphate tRNA ligase: purine-nucleoside spermidine biosynthesis I GTP pyrophosphokinase: D-glycerate trehalose-phosphate thymidine all-trans- a 7,8-dihydro-8- 6-phospho 3-oxo-2-(cis-2'-pentenyl)- (1R,6R)-6-hydroxy-2- a negatively S-(hydroxymethyl) 6-O-cis-methoxy- a [protein]-L- (5R)-5-benzyl- a [protein]- glucosyl-3- glucosyl-3- JAN01S_RS10505 adenosine phosphorylase: an (R)-2-halocarboxylate isobutanoate 2-carboxy-1,4- a peptide with a JAN01S_RS16365 synthase: an L-isoleucyl- tridecaprenyl D-glucono- succinylcyclohexa-2,4- phosphoenol supercoiled DNA mycolyl-trehalose proline (ω = 180) repressor LexA L-tyrosine guanosine 3'-diphosphate phosphorylase: JAN01S_RS02675 naphthoquinol oxoguanine in DNA leader sequence cyclopentane-1-hexanoyl-CoA dADP bacillithiol hydantoin phosphoglycerate phosphoglycerate JAN01S_RS05250 [tRNA Ile ] deaminase: HAD family hydrolase: acetyl-coenzyme diphosphate DNA- 1,5-lactone diene-1-carboxylate pyruvate DNA topoisomerase S-(hydroxymethyl) 6-phosphate peptidylprolyl phosphate asp [+ 2 isozymes] 5'-triphosphate 3'- α,α-trehalose JAN01S_RS02710 purine-nucleoside 1,4-dihydroxy- signal peptidase I: Asp/Glu/hydantoin protein-tyrosine- SAM synthase: synthase: a tRNA Ile uracil phosphorylase: JAN01S_RS06270 acyl-CoA oxidase: O-succinylbenzoate trehalose- trehalose phosphorylase: JAN01S_RS15225 A synthetase: formamidopyrimidine 6-phosphogluconolactonase: JAN01S_RS04995 pyruvate kinase: IV subunit B: mycothiol isomerase: repressor LexA: racemase: aspartate kinase: diphosphatase: JAN01S_RS15830 6-phosphate 2-naphthoate synthase: phosphatase: phosphatase: α 2-O-(α-D-JAN01S_RS15830 JAN01S_RS02710 thymine adenosine HAD family hydrolase: JAN01S_RS14185 glycosylase: JAN01S_RS07560 JAN01S_RS03380 JAN01S_RS09675 dehydrogenase: JAN01S_RS07350 JAN01S_RS01985 2-O-( -D-glucopyranosyl) biosynthesis IV JAN01S_RS02675 polyprenyltransferase: JAN01S_RS07890 [+ 2 isozymes] JAN01S_RS09375 JAN01S_RS05630 JAN01S_RS06105 JAN01S_RS06595 trehalose- deaminase: JAN01S_RS03660 JAN01S_RS05255 -3-phospho-D-glycerate glucopyranosyl) JAN01S_RS00110 JAN01S_RS01260 3-oxo-2-(cis-2'-pentenyl) [+ 2 isozymes] JAN01S_RS05295 trehalose- [+ 2 isozymes] L-aspartyl- phosphatase: inosine 5'-phosphate JAN01S_RS03605 D-gluconate a leader sequence a peptide dATP pyruvate (5S)-5-benzyl- [+ 3 isozymes] -3-phospho- α-maltose purine-nucleoside JAN01S_RS02700 isobutanoyl-CoA AMP diphosphate an apurinic site 7,8-dihydro- -cyclopentane-1-(E- 2-succinylbenzoate a [protein]-L- cleaved putrescine dAdoMet degradation a halide anion an (S)-2-hydroxycarboxylate DMKH2-13 6-phosphate a relaxed DNA S-formylbacillithiol cis-methoxy- hydantoin a [protein]- 4-phosphate JAN01S_RS05255 maltose alpha-D- α within DNA 8-oxoguanine proline (ω = 0) GTP ppGpp D-glycerate uracil 2-deoxy- - phosphorylase: hexa-2-enoyl)-CoA mono-mycolate repressor LexA L-tyrosine spermidine glucosyltransferase: leu D-ribose 1- JAN01S_RS02675 aspartate- α,α-trehalose leucine--tRNA ligase: 2-deoxy-α-D-ribose 1-phosphate synthase: 2-[2-O-(α-D-mannopyranosyl) semialdehyde JAN01S_RS10425 phosphate 2'-deoxyinosine IMP -(1->2)-α-D-glucopyranosyl]- α α JAN01S_RS09325 an L-leucyl- α 6-O-trans-keto- JAN01S_RS08070 α , -trehalose inosine 5- all-trans- a 2-O-( -D-mannosyl)-1- a peptide with 3-oxo-2-(cis-2'-pentenyl)- an insertion sequence (5Z)- dehydrogenase: 2-O-( -D- [tRNA Leu ] an (S)-2-halocarboxylate 2-carboxy-1,4- isobutanal agmatine lauroyl-CoA H O acryloyl-CoA NAD + a quinone histidinol GTP pyrophosphokinase: 3-phospho-D-glycerate dodecaprenyl phosphatidyl-1D-myo-inositol an N-terminal 2 mycolyl-trehalose JAN01S_RS08725 glucopyranosyl) Leu monophosphate 4'-phosphopantetheine ATP cyclopentane-1-butanoyl-CoA element IS30 dodecenoyl-CoA spermidine a tRNA naphthoquinol phosphatidylinositol JAN01S_RS16365 HAD family hydrolase: diphosphate acetaldehyde Xaa-L-prolineleucyl transposase: acyl-CoA crotonyl-CoA 6-phosphate acyl-CoA NADH NADPH:quinone histidinol guanosine-3',5'- -D-glycerate dehydrogenase: 1,4-dihydroxy- trehalose- L-aspartate- [+ 2 isozymes] 2-deoxy-D-ribose JAN01S_RS15225 pantetheine-phosphate dehydrogenase mannoside acyl-CoA oxidase: agmatine deiminase: thioesterase: carboxylase/ dehydrogenase: pyrophosphatase: bis(diphosphate) 2-deoxy-D-ribose 5-phosphate JAN01S_RS08115 2-naphthoate aminopeptidase: JAN01S_RS16380 reductase: dehydrogenase: semialdehyde 5-phosphate acyltransferase: JAN01S_RS07560 JAN01S_RS09150 phosphatase: nucleoside-diphosphate HAD family hydrolase: adenylyltransferase: (acetylating): JAN01S_RS14235 JAN01S_RS00915 reductase: JAN01S_RS15925 JAN01S_RS04665 JAN01S_RS04280 JAN01S_RS11055 3'-diphosphatase: 2-[2-O-(α-D-mannopyranosyl)-(1->2) IMP dehydrogenase: polyprenyltransferase: a peptide with [+ 2 isozymes] JAN01S_RS05255 kinase: JAN01S_RS13495 JAN01S_RS00110 JAN01S_RS01280 JAN01S_RS12430 JAN01S_RS02085 a proteinogenic 3-oxo-2-(cis-2'-pentenyl) an insertion [+ 2 isozymes] JAN01S_RS08355 [+ 11 isozymes] diaminobutyrate- JAN01S_RS01985 -α-D-glucopyranosyl]-D-glycerate JAN01S_RS03605 a 2-O-(6-O-acyl-α-D-mannosyl)- an N-terminal trehalose- 2-deoxyribose-5- 2-deoxyribose-5- JAN01S_RS04455 3'-dephospho-CoA N-carbamoylputrescine (R)-methylmalonyl- (2E,5Z)- NMN AMP a semiquinone -2-oxoglutarate GDP a halide anion an (S)-2-hydroxycarboxylate H + NADH isobutanoyl-CoA amino acid -cyclopentane-1-(E- sequence IS30 with laurate trans-keto- his val phosphate aldolase: phosphate aldolase: XMP DMK-12 1-phosphatidyl-1D-myo-inositol L-proline CoA dodecenoyl-CoA transaminase: valine--tRNA ligase: buta-2-enoyl)-CoA integrated transposon mono-mycolate JAN01S_RS02695 JAN01S_RS02695 JAN01S_RS01755 JAN01S_RS10455 an L-valyl- [tRNA Val ] deoxyribose- deoxyribose- L-2,4- Val an all-trans- 747 (2Z,4E)-2-amino- a tRNA phosphate aldolase: phosphate aldolase: an oxidized 10 keto- 3-oxo-2-(cis-2'-pentenyl)- (+)-7-epi- a uracil (S)-4-amino-5- an organic a [protein]- N 5 -methyltetrahydromethanopterin 2-carboxy-1,4- 4-hydroxyphenylpyruvate a [ThiI sulfur-carrier an N - porphobilinogen H O N,N-dimethylaniline a dipeptide diaminobutanoate polyisoprenyl cys phe jasmonoyl-CoA 2 6-oxohexa- JAN01S_RS10555 JAN01S_RS10555 factor 420 naphthoquinol protein]-L-cysteine formyltetrahydrofolate phenylpyruvate cyclopentane-1-octanoyl-CoA in 23S rRNA oxopentanoate hydroperoxide L-histidine 5,10-methylene diphosphate acyl-CoA FAD-containing 23S rRNA 2,4-dienoate glutamate-1- diaminobutyrate 1,4-dihydroxy- 4-hydroxyphenylpyruvate cysteine desulfurase: phenylalanine 4- 4-hydroxyphenylpyruvate hydroxymethylbilane 2-hydroxymuconic membrane peroxiredoxin: histidine kinase: xanthosine tetrahydromethanopterin acyl-CoA oxidase: thioesterase: monooxygenase (uracil(747)-C(5))- semialdehyde acetyltransferase: D-glyceraldehyde 2-naphthoate dioxygenase: JAN01S_RS09065 monooxygenase: dioxygenase: synthase: semialdehyde dipeptidase: JAN01S_RS03225 JAN01S_RS05245 acetaldehyde acetaldehyde D-glyceraldehyde 3-phosphate reductase: JAN01S_RS07560 JAN01S_RS04065 EthA: methyltransferase: aminotransferase: JAN01S_RS01750 3-phosphate polyprenyltransferase: JAN01S_RS03055 a [ThiI[+ 3sulfur- isozymes] JAN01S_RS14180 JAN01S_RS03055 JAN01S_RS07235 dehydrogenase: JAN01S_RS04385 [+ 3 isozymes] [+ 3 isozymes] JAN01S_RS12670 4a-hydroxy-N 10 - 3-oxo-2-(cis-2'-pentenyl) JAN01S_RS00695 JAN01S_RS13695 JAN01S_RS07215 a [protein]- ala nucleosidase: JAN01S_RS03605 (2-hydroxyphenyl) [+ 2 isozymes] JAN01S_RS12410 (2S)-4-acetamido- acetaldehyde acetaldehyde a reduced 5,10-methylene- homogentisate ala carrier protein]-S- tyr preuroporphyrinogen (+)-7-epi- N,N-dimethylaniline- a 5-methyluracil 747 a proteinogenic an alcohol alanine--tRNA ligase: JAN01S_RS12910 formyltetrahydrofolate -cyclopentane-1-(E- (2Z,4E)-2- 5-aminolevulinate N-phospho- 2-aminobutanoate Cofactor, Prosthetic Group, Electron Carrier, and Vitamin Biosynthesis dehydrogenase dehydrogenase DMKH sulfanyl-L-cysteine acetate amino acid JAN01S_RS06920 an L-alanyl- factor 420 tetrahydromethanopterin 2 octa-2-enoyl)-CoA jasmonate N-oxide in 23S rRNA aminomuconate L-histidine (acetylating): (acetylating): purine-nucleoside L-ectoine [tRNA Ala ] phosphorylase: synthase: cob(II)yrinate a,c-diamide a tRNA Ala JAN01S_RS12430 JAN01S_RS12430 [2Fe-2S] iron-sulfur cluster biosynthesis flavin biosynthesis I (bacteria and plants) N 10 -formyl-tetrahydrofolate biosynthesis thiamine diphosphate NAD biosynthesis I (from aspartate) thiamine diphosphate JAN01S_RS02675 ectC biosynthesis II (late an apo-[LYS2 L- an N-acylated (6Z,9Z,12Z,15Z,18Z)- dihomo γ- a double-stranded a supercoiled an organic biosynthesis biosynthesis I (E. coli) acetyl-CoA acetyl-CoA isochorismate 2-oxoglutarate an (R)-2-halocarboxylate ethylnitronate O-succinyl-L- a nucleoside H O phytosphingosine 1-myristoylglycerol acetyl-CoA cobalt incorporation) 2-aminoadipyl- coenzyme A aliphatic-L- tetracosapentaenoyl-CoA linolenoyl-CoA 2 oligonucleotide β-alanine duplex DNA molecule purine ribonucleosides degradation xanthine homoserine triphosphate 3-phosphate ectoine II (Bacillus) 2-succinyl-5-enolpyruvyl-6- HAD family hydrolase: 2-nitropropane carrier-protein] amino acid acyl-CoA acetyl-CoA cytochrome P450: uroporphyrinogen-III a tetrahydrofolate O-succinylhomoserine N-acyl-L-amino acid 1-acyl-sn-glycerol- helicase: L-cysteine desulfurase GTP asp HMP-PP dioxygenase: holo-ACP synthase: NTP acyl-CoA oxidase: sphingosine kinase: oligoribonuclease: 4-aminobutyrate HMP-PP hydroxy-3- cyclohexene-1- JAN01S_RS15225 sulfhydrylase: amidohydrolase: thioesterase: 3-phosphate acetyltransferase: JAN01S_RS15020 JAN01S_RS12220 bifunctional thiamine phosphate JAN01S_RS04570 pyrophosphohydrolase: thiamine phosphate L-aspartate oxidase: carboxylic-acid synthase: HAD family hydrolase: JAN01S_RS00685 a holo-[LYS2 L- JAN01S_RS07560 JAN01S_RS04065 JAN01S_RS09995 JAN01S_RS03255 aminotransferase: JAN01S_RS07540 cytochrome P450: cysteine desulfurase: synthase: asn [unspecified JAN01S_RS11430 JAN01S_RS02740 acyltransferase: [+ 5 isozymes] uroporphyrinogen-III JAN01S_RS11995 adenosine JAN01S_RS11195 JAN01S_RS05610 bifunctional synthase: JAN01S_RS03675 JAN01S_RS00110 2-aminoadipyl- 3',5'-ADP an aliphatic [+ 2 isozymes] JAN01S_RS04325 [+ 6 isozymes] JAN01S_RS00660 C-methyltransferase/ JAN01S_RS07965 methionine synthase: JAN01S_RS10165 degradation nitrite acetaldehyde succinate L-homocysteine a carboxylate a nucleoside 5'- (2E,6Z,9Z,12Z,15Z,18Z) γ phytosphingosine a nucleoside 5'- a single 3,4-dihydroxy- JAN01S_RS10165 2-iminosuccinate an L-asparaginyl- pyrimidine deoxyribonucleotides 2-succinyl-5-enolpyruvoyl-6-hydroxy- carrier-protein] L-amino acid di-homo- - dimyristoyl 3-oxopropanoate [+ 3 isozymes] JAN01S_RS07430 thiamine urate a halide anion an (R)-2-hydroxyacid products] -tetracosahexaenoyl-CoA 1-phosphate monophosphate acetoacetyl-CoA stranded DNA an alcohol uroporphyrinogen- thiamine Asn dephosphorylation adenosine deaminase: 3-cyclohexene-1-carboxylate monophosphate linolenate 2-butanone- phosphate [tRNA ] phosphatidate III synthase: methionine synthase: phosphate quinolinate phosphopantothenate biosynthesis I Asn JAN01S_RS06270 an S-sulfanyl-[L- 4-phosphate tRNA NTP JAN01S_RS07230 JAN01S_RS01605 synthetase: thiamine- cysteine desulfurase] synthase/GTP thiamine- pyrophosphohydrolase: adenosine deaminase: dihydrofolate JAN01S_RS08980 phosphate kinase: xanthosine (R)-4'- 4a-hydroxy-N 10 - a 3-methyl-branched a [DNA]-3'- a 5'-phospho- a dimer of non-adjacent 3-oxopentanoyl- (3R)-3-hydroxy-2-oxo- adenosyl-cobyrinate 4-(2'- uroporphyrinogen-III cyclohydrolase II: phosphate kinase: 3-methyl-2-oxobutanoate JAN01S_RS11195 JAN01S_RS02700 NAD + 3-hydroxy- palmitoyl-CoA H O a sphingoid base 3-methylcatechol sphingosine chorismate (S)-nicotine reductase: JAN01S_RS01310 dCTP dCMP phosphopantothenoyl- formyltetrahydrofolate 2,3,4-saturated 2-oxoglutarate hydroxyl [DNA] 2'-deoxycytidines in DNA CoA 4 phosphooxybutanoate 2 a,c-diamide carboxyphenyl)- C-methyltransferase: JAN01S_RS10275 JAN01S_RS01310 L-kynurenine JAN01S_RS14720 quinolinate 3-methyl-2-oxobutanoate L-cysteine 4a-hydroxytetrahydrobiopterin fatty acyl-CoA DNA ligase: acetyl-CoA acyl-CoA 4-oxobutyryl-CoA FAD-containing JAN01S_RS01015 2,5-diamino-6- thiamine adenosine inosine guanosine phytanoyl-CoA deoxyribodipyrimidine phosphoserine cobyric acid catechol 2,3- isochorismate thiamine aspartate-- kynureninase: sphingosine kinase: naphthoate sphingosine kinase: an S-sulfanyl-[cysteine [+ 2 isozymes] hydroxymethyltransferase: diphosphate asp phosphopantothenoylcysteine dehydratase: dioxygenase: JAN01S_RS11950 photolyase: acetyltransferase: aminotransferase: thioesterase: synthase CobQ: dioxygenase: synthase: monooxygenase precorrin-1 (5-phospho-D- nicotinate-nucleotide dUTPase: nucleosidase: JAN01S_RS02380 synthase: serine diphosphate JAN01S_RS11380 tRNA ligase: JAN01S_RS04215 JAN01S_RS07540 JAN01S_RS00915 JAN01S_RS09995 JAN01S_RS09995 EthA: desulfurase]-[disordered- ribosylamino) gcv system: pyrophosphorylase: JAN01S_RS12910 decarboxylase: JAN01S_RS16140 a 2-hydroxy-3-methyl-JAN01S_RS10635 JAN01S_RS04150 JAN01S_RS12150 JAN01S_RS01110 JAN01S_RS15585 JAN01S_RS03680 a 7,8-dihydrofolate hydroxymethyltransferase: a 5-methyltetrahydrofolate JAN01S_RS06965 JAN01S_RS09725 JAN01S_RS03625 bifunctional form scaffold an L-aspartyl- [+ 2 isozymes] NMN AMP [DNA] ala 3-hydroxyanthranilate [+ 6 isozymes] [+ 2 isozymes] cis,cis-2-hydroxy- JAN01S_RS00695 pyrimidin- JAN01S_RS01700 JAN01S_RS11990 [+ 2 isozymes] purine-nucleoside purine-nucleoside purine-nucleoside purine-nucleoside 10 succinate branched 2,3,4- 4-phosphooxy- a sphingoid 1,4-dihydroxy-2- sphingosine JAN01S_RS08490 2-dehydropantoate [tRNA asp ] 4'-phosphopantetheine an N -formyl- a cytosine in DNA adenosylcobyrate 6-oxohepta- isochorismate nicotine- uroporphyrinogen-III protein] complex 4(3H)-one dUTP dUMP saturated fatty acyl-CoA propanoyl-CoA acetyl-CoA L-threonine palmitate 1-phosphate 1-phosphate tRNA asp phosphorylase: phosphorylase: phosphorylase: phosphorylase: 7,8-dihydrofolate naphthoyl-CoA 1'-N-oxide C-methyltransferase/ cysteine desulfurase: NaMN 2,4-dienoate D-ribulose diaminohydroxyphosphoribosylaminopyrimidine thymidylate JAN01S_RS02675 JAN01S_RS02675 JAN01S_RS02675 JAN01S_RS02675 uroporphyrinogen- JAN01S_RS07965 heme a biosynthesis 5-phosphate deaminase: JAN01S_RS10285 synthase: nicotinate-nicotinamide III synthase: [+ 3 isozymes] 5-hydroxy-CTP 5-hydroxy-CMP a [cysteine desulfurase]- UDP-N-acetyl-α-D-muramoyl- a single- RNase III mRNA (6R)-L-erythro a [heparan-sulfate]-2- a long-chain 2-keto-D- β-D-glucose D-erythro- 3,4-dihydroxy- 5-amino-6-(5- JAN01S_RS09050 nucleotide β-alanine α-D-ribose-1-phosphate D-alanyl-D-alanine an acyl- an N-modified H O 4-methylcatechol oleoyl-CoA 3-ethylmalate JAN01S_RS07230 (R)-pantoate γ processing coenzyme A -5,6,7,8- phe 2 6-phosphate ser S-sulfanyl-[disordered- 2-butanone 4- phospho-D- adenylyltransferase: ferroheme b L-alanyl- -D-glutamyl-L-lysine a tRNA precursor CTP ATP stranded RNA aminoacyl-[tRNA] O-sulfo-α-L-iduronate fatty acyl-CoA gluconate sphinganine bifunctional tyrosine-- polyribonucleotide carrier protein acyl-CoA acyl-CoA uroporphyrinogen-III form scaffold a (6S)-5-formyltetrahydrofolate protoheme IX α UDP-N-acetylmuramoyl- substrate peptidyl-tRNA tetrahydrobiopterin phenylalanine 4- catechol 2,3- 2,5-diketo-D-gluconic inositol-3-phosphate 3-isopropylmalate phosphate synthase: ribosylamino)uracil methylenetetrahydrofolate JAN01S_RS09285 tyr -D-ribose 1,5- ribonuclease III: holo-ACP synthase: sphingosine kinase: L-serine farnesyltransferase: tRNA ligase: tripeptide--D-alanyl- CCA tRNA nucleotidyltransferase: iduronate sulfatase: thioesterase: dehydrogenase: synthase: C-methyltransferase: protein] complex JAN01S_RS12340 5-amino-6-(5- phosphomutase: JAN01S_RS01265 JAN01S_RS04570 hydrolase: monooxygenase: dioxygenase: acid reductase: dehydrogenase: dehydrogenase/ 5-formyltetrahydrofolate nicotinate adenine pantoate--beta-alanine JAN01S_RS11180 nucleotidyltransferase: JAN01S_RS09005 RNase III JAN01S_RS07570 JAN01S_RS00915 JAN01S_RS15925 JAN01S_RS09995 ammonia-lyase: JAN01S_RS01015 cysteine desulfurase: JAN01S_RS07920 an L-tyrosyl- D- alanine ligase: JAN01S_RS07055 JAN01S_RS14180 JAN01S_RS15585 JAN01S_RS00680 JAN01S_RS12225 JAN01S_RS01440 phosphoribosylamino) methenyltetrahydrofolate dinucleotide ligase: JAN01S_RS12005 JAN01S_RS02680 a nucleoside a single- JAN01S_RS15340 JAN01S_RS07965 bifunctional cyclo-ligase: ferroheme o [tRNA Tyr ] JAN01S_RS02170 a tRNA JAN01S_RS15280 an mRNA fragment processing acyl-carrier protein 3',5'-ADP an N-modified an uncharged (6R)-6,7- [+ 2 isozymes] [+ 11 isozymes] uracil reductase: α tyr a [heparan sulfate]- 2-hydroxy-5-methyl-6- 2,5-didehydro- sphinganine precorrin-2 3,4-dihydroxy- cyclohydrolase: JAN01S_RS14390 NAD+ synthetase, Tyr UDP-N-acetyl- -D-muramoyl-L-alanyl- containing a diphosphate stranded RNA product mRNA tRNA a long-chain (2E,9Z)- Ins(3)P 2-oxovalerate [+ 3 isozymes] a tRNA D-ribose 5-phosphate amino acid dihydrobiopterin α-L-iduronate oxohexa-2,4-dienoate D-gluconate pyruvate an S-sulfanyl-[cysteine JAN01S_RS12555 JAN01S_RS10235 NAD(+) synthase: γ-D-glutamyl-L-lysyl-D-alanyl-D-alanine fatty acid octadecenoyl-CoA 1-phosphate 2-butanone- glutamine (R)-pantothenate 3' CCA end precorrin-2 C(20)- 5-amino-6-(5- a 5,10-methylenetetrahydrofolate a 5,10-methenyltetrahydrofolate desulfurase]-S- 4-phosphate dependent: JAN01S_RS00650 methyltransferase: phospho-D- Aromatic Compound Degradation sulfanyl-[disordered- synthase/GTP JAN01S_RS00650 pantothenate kinase: JAN01S_RS01080 ribitylamino)uracil bifunctional 2,5-dichloro-trans a 2,3,4-saturated a long-linear (6Z,9Z,12Z,15Z,18Z,21Z) 6-O-trans-methoxy- 6-trans- form scaffold cyclohydrolase II: JAN01S_RS04580 ferroheme i quinoxaline-2- nicotinate PRPP [EntF L-seryl- a uridine in tRNA N-acetyl- wound RNA 5-aminolevulinate ethanol pyruvate methylenetetrahydrofolate + acyl-carrier protein CTP 1,2-diacyl-sn- coenzyme A α-D-glucan mycolyl-trehalose phe NAD Trp tryptophan-- 4-chloronitrobenzene -dienelactone -tetracosahexaenoyl-CoA tridecenoyl-CoA protein] complex JAN01S_RS10275 a tRNA carboxyl adenylate carrier protein] glycogen L-citrulline precorrin-3A cysteine desulfurase: dehydrogenase/ tRNA ligase: catechol degradation to carboxymethylenebutenolidase: glycerol 3-phosphate nicotinate tRNA dihydrouridine 6-phosphate acetylornithine RNA helicase: porphobilinogen pyruvate 1-deoxy-L- (R)-4'-phosphopantothenate degradation acyl carrier protein: phosphatidate holo-ACP synthase: trehalose- L-cysteine biosynthesis methenyltetrahydrofolate 2-oxopent-4-enoate II Detoxification phosphoribosyltransferase: phosphorylase: acyl-CoA oxidase: acyl-CoA oxidase: JAN01S_RS04060 aspartate catalase: JAN01S_RS07965 JAN01S_RS02770 an L-tryptophanyl- JAN01S_RS11005 JAN01S_RS11535 cytidylyltransferase: synthase DusB: deacetylase: synthase: carboxylase: glycero-tetrulose VI (from L-methionine) JAN01S_RS04570 JAN01S_RS08290 JAN01S_RS07560 phosphatase: JAN01S_RS07560 aminotransferase: JAN01S_RS11110 ARP mycothiol biosynthesis cyclohydrolase: Trp 1-chloro-4-nitrobenzene a quinoxaline-2- JAN01S_RS03135 a holo-[EntF JAN01S_RS08615 JAN01S_RS07550 RNA helicase: JAN01S_RS07225 JAN01S_RS08605 [+ 3 isozymes] 4-phosphate [tRNA ] [+ 2 isozymes] JAN01S_RS00840 α-D- JAN01S_RS05255 a [cysteine JAN01S_RS10235 catechol reactive oxygen species degradation a CDP-2,3,4-saturated- 3',5'-ADP L-seryl-carrier a long-linear JAN01S_RS09990 JAN01S_RS14490 hydroxyferroheme i trp AMP carboxyl-[aryl- NaMN glucopyranose (2E,6Z,9Z,12Z,15Z,18Z,21Z) a 5,6-dihydrouridine acetate L-citrulline 2-trans-6-trans- arsenate 2,5-dichloromaleylacetate α-D-glucan trehalose-trans- porphobilinogen keto- acetaldehyde oxaloacetate desulfurase]-(S- D-glucopyranose met catechol 2,3- carrier protein] diacylglycerol protein] an unwound RNA precorrin-3B 6,7-dimethyl-8- 10 demethylmenaquinol- 1-phosphate -tetracosaheptaenoyl-CoA in tRNA methoxy-mono-mycolate tridecadienoyl-CoA phenylpyruvate sulfanyl) -[disordered- 6-phosphate methionine an N -formyltetrahydrofolate 1-chloro-4- dioxygenase: detoxification 2 6 biosynthesis I tetrahydrofolate biosynthesis superoxide form scaffold ribityllumazine JAN01S_RS15585 protocatechuate degradation II (glutaredoxin) precorrin-3B (C 17 )- inositol-3-phosphate adenosyltransferase: nitrosobenzene synthase: all-trans- HMS protein] complex synthase: JAN01S_RS16145 2-carboxy-1,4- (7,8-dihydropterin- II (ortho-cleavage pathway) arsenate [dermatan-sulfate] methyltransferase: JAN01S_RS10270 hexaprenyl threonine-- superoxide dismutase: 2-chloro-cis- a [protein] (L-serine/L- 2-hydroxy-2- 6-cis- 3-[(3'-methylthio) SAM naphthoquinol 6-yl)methyl 4-aminobenzoate ferroheme a thr trans-dienelactone icosapentaenoate coenzyme A maltohexaose phytanoyl-CoA 2-oxoglutarate crotonyl-CoA MeOH nicotinamide JAN01S_RS01080 JAN01S_RS12225 glutathione biosynthesis JAN01S_RS06750 arsenate reductase VibB coenzyme A L-cystathionine containing 2-O- thr diphosphate1,4-dihydroxy- tRNA ligase: 2-hydroxymuconate protocatechuate dienelactone threonine) phosphate methylpropanenitrile tridecenoyl-CoA propyl]malate diphosphate (glutaredoxin): acyl-CoA synthetase: glycogen phytanoyl-CoA sulfo-α-L-iduronate crotonyl-CoA 6,7-dimethyl-8-(1- 2-naphthoate JAN01S_RS15105 6-semialdehyde carboxymethylenebutenolidase: carboxymethylenebutenolidase: cystathionine 3-isopropylmalate precorrin-4 Ins(3)P UDP-N-acetyl- molybdenum cofactor biosynthesis an L-threonyl- 1-chloro-4- phosphorylase: holo-ACP synthase: protein nitrilase: acyl-CoA oxidase: threonine catalase: nicotinamidase: a [cysteine desulfurase]- 7,8- hydrogen peroxide JAN01S_RS04030 JAN01S_RS06200 dioxygenase: iduronate sulfatase: carboxylase/ D-ribityl)lumazine polyprenyltransferase: [tRNA Thr ] hydroxylaminobenzene dehydrogenase: JAN01S_RS11005 JAN01S_RS11005 JAN01S_RS04570 beta-lyase: phosphatase: dehydrogenase: α-D-glucosamine dihydropteroate cys Glu arsenite [+ 5 isozymes] JAN01S_RS08290 JAN01S_RS10635 JAN01S_RS01540 JAN01S_RS07560 reductase: dehydratase: JAN01S_RS11110 JAN01S_RS03080 precorrin-4 C(11)- [scaffold protein- JAN01S_RS03605 a tRNA Thr JAN01S_RS12410 3-carboxy-cis [+ 2 isozymes] [+ 2 isozymes] JAN01S_RS08910 JAN01S_RS07570 JAN01S_RS01440 riboflavin synthase: α-D-glucopyranose 2-hydroxyphytanoyl- a holo-[VibB aryl- JAN01S_RS15300 JAN01S_RS00050 (2Fe-2S)] complex demethylmenaquinol-6 dihydrofolate glutamate-- (2Z,4E)-2- icosapentaenoyl-CoA maltopentaose succinate 3',5'-ADP JAN01S_RS08355 methyltransferase: D-inositol-3-phosphate ,cis-muconate catalase: carrier protein] L-homocysteine pyruvate a [dermatan] containing 2-hydroxy-2- 2-trans,6-cis- 6-(methylthio)- JAN01S_RS10280 ATP synthase: cysteine ligase: 2-chloromaleylacetate 2-maleylacetate 1-phosphate CoA a [protein] Ser/Thr (2S)- formaldehyde nicotinate JAN01S_RS01040 SAH GTP hydroxyhexa- JAN01S_RS11110 α-L-iduronate methylpropanoate tridecadienoyl-CoA 2-oxohexanoate 2-oxobutanoate glycosyltransferase: ethylmalonyl-CoA cys JAN01S_RS13510 JAN01S_RS05015 2,4-dienedioate riboflavin JAN01S_RS05375 2-amino-5-chlorophenol precorrin-5 molybdopterin- GTP 3',8- 7,8-dihydrofolate glutamate-- 4-oxalocrotonate H O hydroxyl radical a [co-chaperone]- (2-carboxy- O 2 arsenite cysteine desulfurase: synthase monoglutamate cysteine ligase: tautomerase: 2 6-O-cis-keto- [scaffold protein- bifunctional riboflavin 1-O-(2-acetamido- cyclase MoaA: ser 2-chloro-trans a plant soluble 3-[(6'-methylthio) cobalt- precorrin- serine--tRNA ligase: 2,5-dihydro- cis-dienelactone a glycogen maltotetraose [EntB aryl- 3-sulfocatechol 3-mercaptopyruvate a DNA segment an L-cysteinyl- propionamide kinase/FMN 2-deoxy-α-D- JAN01S_RS07965 adenylyltransferase: JAN01S_RS10910 JAN01S_RS13745 JAN01S_RS12415 heteroglycan coenzyme A cys L-homocysteine mycolyl-trehalose leu 6A synthase (2Fe-2S)] complex γ-L-glutamyl- -dienelactone carrier protein] [tRNA Cys ] hexyl]malate precorrin-6A S-ribosyl-L- [+ 3 isozymes] JAN01S_RS10940(8S)-3',8-cyclo-7,8- JAN01S_RS15980 an L-seryl- 5-oxofuran- glycogen glycogen glycogen catechol 2,3- 6-phosphate adenylyltransferase: glucopyranosyl)-1D-myo L-cysteine (3E)-2-oxohex- carboxymethylenebutenolidase: carboxymethylenebutenolidase: cystathionine 3-mercaptopyruvate recombinase XerD: peptidyl-tRNA 3-isopropylmalate amidase: cobalt-precorrin- (deacetylating): SSQ1 chaperone: homocysteine an [L-cysteine a carboxy-adenylated [tRNA ser ] (2Z,4Z)-2-amino-5- 2-yl)-acetate phosphorylase: phosphorylase: phosphorylase: holo-ACP synthase: trehalose- leucine JAN01S_RS13415 -inositol 3-phosphate dihydroguanosine 3-enedioate dioxygenase: JAN01S_RS01105 JAN01S_RS00235 ser chloro-6-oxohexa- 4-carboxymuconolactone JAN01S_RS11005 JAN01S_RS11005 JAN01S_RS04570 beta-synthase: sulfurtransferase: JAN01S_RS01960 hydrolase: dehydrogenase: JAN01S_RS05620 6A reductase: desulfurase]-S- [small subunit of 5'-triphosphate a tRNA JAN01S_RS08290 JAN01S_RS08290 JAN01S_RS08290 JAN01S_RS15585 phosphatase: dehydrogenase: a 7,8-dihydrofolate 4-oxalocrotonate [+ 2 isozymes] [+ 2 isozymes] JAN01S_RS13105 (2Z,4E)-2- JAN01S_RS08630 [+ 3 isozymes] JAN01S_RS07055 JAN01S_RS01440 [+ 2 isozymes] JAN01S_RS00995 a [chaperone-ATP]- FMN sulfanyl-L-cysteine molybdopterin synthase] 2,4-dienoate decarboxylase: α-D-glucopyranose α-D-glucopyranose a plant soluble α-D-glucopyranose a holo-[EntB aryl- JAN01S_RS05255 JAN01S_RS05030 cyclic pyranopterin an α-limit dextrin maltotriose 3',5'-ADP Cys precorrin-6A 2-hydroxymuconic decarboxylase: JAN01S_RS09130 carrier protein] L-cystathionine sulfite hydroxyhexa- a DNA segment in a tRNA cys trehalose-cis-keto- 9-(methylthio)- 4-methyl-2- cobalt- [co-chaperone]- monophosphate dihydrofolate 2-chloromaleylacetate 2-maleylacetate 1-phosphate 1-phosphate heteroglycan 1-phosphate pyruvate propanoate bifunctional riboflavin 1-(2-acetamido- glutathione semialdehyde JAN01S_RS12420 (4,5-dihydro- 2,4-dienedioate reverse orientation mono-mycolate 2-oxononanoate oxopentanoate precorrin-6B [scaffold protein- synthase MoaC: reductase: dehydrogenase: 5-oxofuran- (2Fe-2S)] complex kinase/FMN 2-deoxy-α-D- L-homocysteine 2-oxopent- JAN01S_RS10930 thiamine salvage II JAN01S_RS14720 2-yl)-acetate adenylyltransferase: glucopyranosyl)- a thiocarboxylated pro JAN01S_RS12410 4-enoate [+ 2 isozymes] C1 Compound Utilization and Assimilation a DNA containing proline--tRNA ligase: (2Z,4Z)-2-amino- 10 a linear malto- SSQ1 chaperone JAN01S_RS13415 1D-myo-inositol cystathionine cyclic pyranopterin an L-methionyl- + a [protein]- an organic a monocarboxylic 3-[(5'-methylthio) precorrin-6B [small subunit of 4-amino-2-methyl-5- an N - a plastoquinone NAD(P)H H leukotriene-D4 2-hydroxyisobutyramide 3-phenylpropionitrile selenide chorismate isoquinoline JAN01S_RS00980 an L-prolyl- 5-chlorohexa- Met DL-allothreonine oligosaccharide an apurinic/ a mercapturate ATPase: N-acetyl-1-D-myo- beta-synthase: molybdopterin synthase] phosphate a tetrahydrofolate formyltetrahydrofolate [initiator tRNA ] L-cysteine hydroperoxide acid amide pentyl]malate biotin ATP pyrimidinemethanol Pro glycogen membrane FAD JAN01S_RS13105 [tRNA ] 2,4-dienedioate formaldehyde oxidation methionyl-tRNA serine NAD(P)H-quinone apyrimidinic site peroxiredoxin: N-acyl-L-amino acid amidase: amidase: selenide, water 3-isopropylmalate isoquinoline 1- JAN01S_RS00235 inositol-2-amino- 4-aminobenzoate formate assimilation into 5,10- formaldehyde endonuclease III: hydroxymethylpyrimidine/ a tRNA Pro VII (THF pathway) phosphorylase: dehydrogenase: JAN01S_RS03225 dipeptidase: nitrilase: biotin--[acetyl-CoA- chorismate mutase: molybdopterin biosynthesis 3-oxoadipate formyltransferase: hydroxymethyltransferase: JAN01S_RS06495 amidohydrolase: JAN01S_RS05620 JAN01S_RS05620 dikinase SelD: dehydrogenase: oxidoreductase: 2-deoxy-alpha- D- methylenetetrahydrofolate oxidation II JAN01S_RS08290 JAN01S_RS04385 JAN01S_RS01540 JAN01S_RS01245 a [chaperone- L-cystathionine phosphomethylpyrimidine JAN01S_RS03270 JAN01S_RS08490 JAN01S_RS02670 a 3'-terminal a 5'-phospho- [+ 2 isozymes] JAN01S_RS02740 JAN01S_RS15635 JAN01S_RS01440 carboxylase] ligase: JAN01S_RS03885 glucopyranoside synthase: heme b biosynthesis (glutathione-dependent) an N-formyl- α-D-glucopyranose a linear malto- an intra- [+ 2 isozymes] [+ 2 isozymes] an [2Fe-2S] kinase: JAN01S_RS15705 formaldehyde + an L-cysteine- JAN01S_RS02530 ADP]-[disordered- JAN01S_RS10905 chorismate (2Z,4Z)-2-chloro- L-methionyl- a tetrahydrofolate gly acetaldehyde NAD(P) a plastoquinol unsaturated sugar [DNA] an alcohol acetate leukotriene-E4 gly 2-hydroxy-2- 8-(methylthio)- biotinyl-5'- isoquinolin- precorrin-7 cluster protein deacetylase: 5-(2-hydroxyethyl) I (aerobic) formate 1-phosphate oligosaccharide protein disulfide 3-phenylpropanoate a monocarboxylate selenophosphate prephenate form scaffold aminodeoxychorismate/ 5-hydroxyhexa- formaldehyde met S-conjugate 5,6-dimethylbenzimidazole JAN01S_RS10070 -4-methylthiazole HMP-P [initiator tRNA ] methylpropanoate 2-oxooctanoate adenylate 2(1H)-one protein] complex anthranilate synthase phenylalanine- 2,4-dienedioate biosynthesis I (aerobic) hydroxyethylthiazole uroporphyrinogen-III a 5,10- molybdopterin parathion degradation 10 non-chaperonin GlcN-Ins hydroxymethylpyrimidine/ component II: -tRNA ligase an N - kinase: uroporphyrinogen methylenetetrahydrofolate S-(hydroxymethyl) phosphomethylpyrimidine JAN01S_RS13280 subunit alpha: 3-[(3aS,4S,7aS)-7a-methyl- a long-linear molecular riboflavin cys JAN01S_RS10170 decarboxylase: formyltetrahydrofolate α-D-glucopyranose a glucan maltotriose (S)-4-amino-5- 5-cis, 7-trans- (S)-4-hydroxy- (5Z)- 3-[(7'-methylthio) (2R,3S)-3- L-cysteine : 1 D- 4-amino-4- bifunctional glutathione 1,5-dioxo-octahydro-1H coenzyme A icosapentaenoyl-CoA α a maltodextrin glu a RNA-DNA hybrid an acyl phosphate cobyrinate acetamide precorrin-8x chaperone ATPase: kinase: JAN01S_RS15705 JAN01S_RS11125 parathion -D-glucan asp fumarate a tRNA tetradecadienoyl-CoA 2-oxopentanoate tetradecenoyl-CoA heptyl]malate isopropylmalate bifunctional riboflavin kinase/ 4-methyl-5-(2- JAN01S_RS13855 deoxychorismate (3E)-2-chloro-5- bifunctional 4-alpha- 4-alpha- oxopentanoate myo-inositol 2- methylenetetrahydrofolate glutathione- -inden-4-yl]propanoate acyl-CoA synthetase: acyl-CoA thioesterase: glycogen ribonuclease HI: JAN01S_RS00235 FMN adenylyltransferase: phosphooxyethyl) coproporphyrinogen III phenylalanine- methylenetetrahydrofolate L-aspartate oxidase: glutamyl-tRNA 2-keto-4-pentenoate 3-isopropylmalate 3-isopropylmalate cobyrinic acid a,c- amidase: precorrin-8X amino-2-deoxy-α- HMP-PP 4-amino-4- oxohex-3-enedioate dehydrogenase/ dependent JAN01S_RS04065 glucanotransferase: phosphorylase: glucanotransferase: acyl-CoA oxidase: acyl-CoA oxidase: an [Fe-S cluster a [disordered- molybdopterin -tRNA ligase JAN01S_RS06200 reductase: JAN01S_RS02560 hydratase: acylphosphatase: dehydrogenase: dehydrogenase: diamide synthase: JAN01S_RS13010 JAN01S_RS13415 thiazole phosphotriesterase: dehydrogenase/ JAN01S_RS10135 JAN01S_RS11995 JAN01S_RS10135 methylmutase: D-glucopyranoside S-adenosyl-L-methionine cycle I adenine dinucleotide deoxychorismate phe 2-oxopent-5- methenyltetrahydrofolate formaldehyde [+ 2 isozymes] JAN01S_RS08290 [+ 2 isozymes] JAN01S_RS07560 JAN01S_RS07560 JAN01S_RS01250 biosynthesis form [Fe-S] cluster FMN subunit beta: methenyltetrahydrofolate 3-[(3aS,4S,7aS)-7a-methyl-[+ 2 isozymes] JAN01S_RS07240 JAN01S_RS12435 JAN01S_RS01440 JAN01S_RS01440 JAN01S_RS01020 [+ 2 isozymes] cobH ligase: lyase: chloro-3-enoate JAN01S_RS15245 cyclohydrolase: dehydrogenase: a short glucan a short glucan α-D-glucopyranose succinate 2-iminosuccinate D-glucopyranose a glucan an L-glutamyl- a nucleoside 5'- chaperone]-ATP scaffold protein] thiamine phosphate menaquinol-7 biosynthesis JAN01S_RS11130 1,5-dioxo-octahydro-1H- coenzyme A icosapentaenoate a maltodextrin DNA 2-trans, 5-cis, 7-trans- 2-oxopent- (2E,5Z)- 10-(methylthio)- 4-methyl-2- cob(II)yrinate an L-phenylalanyl- cyclohydrolase: 1-phosphate Glu NADPH-dependent JAN01S_RS07450 JAN01S_RS14810 decarboxylase: JAN01S_RS10235 JAN01S_RS14330 [tRNA ] monophosphate a carboxylate acetate hydrogenobyrinate synthase: [tRNA Phe ] JAN01S_RS10235 inden-4-yl]propanoyl-CoA tetradecatrienoyl-CoA 4-enoate tetradecenoyl-CoA 2-oxodecanoate oxopentanoate a,c-diamide SAM all-trans- JAN01S_RS12435 FMN reductase: JAN01S_RS10165 2-carboxy-1,4- protoporphyrinogen IX Phe 4-nitrophenol paraoxon degradation a 5,10- deacetylmycothiol MoO -molybdopterin heptaprenyl 4-aminobenzoate a tRNA diethylthiophosphate a 5,10- S-formylglutathione cobyrinic acid a,c- JAN01S_RS06615 2 naphthoquinol (3E)-5-chloro-2- methenyltetrahydrofolate cofactor diphosphate protoporphyrinogen methenyltetrahydrofolate 1,4-dihydroxy- oxopent-3-enoate a [glycine-cleavage an N-formyl-L- a (1->4)- diamide synthase: menaquinol-10 biosynthesis [+ 2 isozymes] paraoxon bifunctional + + D-sedoheptulose 4-hydroxybutanoyl- 3-[(4'-methylthio) a (5Z)-alkan- mycothiol synthase: methionine thiamine 2-naphthoate oxidase: maltopentaose D-glucopyranose a glycogen a ribonucleic acid hydrogencarbonate H FMNH NADP uroporphyrinogen-I reduced riboflavin octanoyl-CoA maleate bifunctional SAM complex H protein] a sulfurated [sulfur carrier] methionylaminoacyl- α-D-glucan 2 JAN01S_RS01020 JAN01S_RS05445 adenosyltransferase: phosphate 2-keto-4-pentenoate phosphotriesterase: methylenetetrahydrofolate 7-phosphate CoA butyl]malate 5-enoyl-CoA all-trans- FMNH polyprenyltransferase: JAN01S_RS13865 methylenetetrahydrofolate 6 tRNA 4-alpha- glycogen ribonuclease PH: glycogen flavin reductase: hydrogenobyrinate 2 hydratase: JAN01S_RS15245 dehydrogenase/ N -octanoyl-L-lysine carbonic anhydrase: uroporphyrinogen phosphoheptose sulfite reductase: 3-isopropylmalate maleate cis- 2-carboxy-1,4- JAN01S_RS16145 thiamine- JAN01S_RS03605 methionine-- lipoyl synthase: peptide deformylase: glucanotransferase: phosphorylase: phosphorylase: acyl-CoA oxidase: acyl-CoA oxidase: acyl-CoA oxidase: decaprenyl dehydrogenase/ JAN01S_RS03185 JAN01S_RS05035 JAN01S_RS11930 isomerase: a,c-diamide naphthoquinol mycothiol demethylmenaquinol-7 protoporphyrin IX met JAN01S_RS12435 diethylphosphate diethylphosphate 4-nitrophenol methenyltetrahydrofolate formate JAN01S_RS14195 JAN01S_RS05880 decarboxylase: JAN01S_RS07995 dehydrogenase: trans isomerase: diphosphate 5,6-dimethylbenzimidazole menaquinol-11 biosynthesis phosphate kinase: tRNA ligase: methenyltetrahydrofolate a [glycine-cleavage JAN01S_RS10135 JAN01S_RS08290 a nucleoside JAN01S_RS08290 [+ 2 isozymes] JAN01S_RS07560 JAN01S_RS07560 JAN01S_RS07560 1,4-dihydroxy- met SAH cyclohydrolase: a L-methionylaminoacyl- a ribonucleic acid H O CO α-D- JAN01S_RS13855 JAN01S_RS03490 [+ 3 isozymes] JAN01S_RS01440 JAN01S_RS05635 cobaltochelatase synthase: JAN01S_RS01100 an L-methionyl- 5-chloro-4-hydroxy- an unsulfurated α-D-glucopyranose 2 2 2-naphthoate JAN01S_RS01310 JAN01S_RS07165 cyclohydrolase: 5'-deoxyadenosine met complex H protein] formate maltose maltotetraose diphosphate a (1->4)- H + NADPH FMN subunit CobN: all-trans- bifunctional ferrochelatase: [elongator 2-oxopentanoate JAN01S_RS10235 [sulfur carrier] tRNA maltotetraose glucopyranose D-glycero-D-manno- 4-hydroxycrotonyl- 7-(methylthio)-2- a (2E,5Z)-alka- (2E)-oct-2- N 6 -lipoyl-L-lysine 1-phosphate α-D-glucan coproporphyrinogen I riboflavin fumarate polyprenyltransferase: 2-carboxy-1,4- thiamine Met JAN01S_RS10235 heptose 7-phosphate JAN01S_RS01095 5,6-dimethylbenzimidazole undecaprenyl demethylmenaquinone JAN01S_RS09715 elongator tRNA ] an N 10 - 1-phosphate CoA oxoheptanoate 2,5-dienoyl-CoA enoyl-CoA JAN01S_RS03605 naphthoquinol diphosphate Met methionine synthase: diphosphate methyltransferase/2- tRNA a 5,10- cob(II)yrinate DMKH2-10 1,4-dihydroxy- Fatty Acid and Lipid Degradation formyltetrahydrofolate pyridoxal 5'-phosphate salvage I ferroheme b methylenetetrahydrofolate a,c-diamide JAN01S_RS01605 2-naphthoate methoxy-6-polyprenyl-1,4- formyltetrahydrofolate N-acetyl-β-D-glucosamine- a dimer of non-adjacent 2'- 4-fumaryl- 34 an organic (indol-3-yl) (S)-2- methionine synthase: benzoquinol methylase: a sulfurated maltohexaose maltose maltoheptaose a single a ribonucleoside FMNH NAD + a cytidine prephenate a nitrile citrate bifunctional polyprenyltransferase: β deformylase: SAM dethiobiotin 1,6-anhydro-N- 2 H O diphosphate lys fatty acid -oxidation I deoxycytidine and thymidine in DNA stranded DNA triphosphate acetoacetate 2 in tRNA Ile2 hydroperoxide acetamide hydroxyglutarate demethylmenaquinone pyridoxine pyridoxamine JAN01S_RS07430 JAN01S_RS03605 JAN01S_RS03685 di-trans,poly-cis JAN01S_RS00850 [sulfur carrier] deoxyribodipyrimidine 4-alpha- glycogen acetyl-β-D-muramate flavin reductase: L-homocysteine S-ribosyl-L-homocysteine DNA primase: fumarylacetoacetase: beta- inorganic tRNA(Ile)-lysidine alkyl hydroperoxide amidase: hydroxyglutarate prephenate aconitate lipoate biosynthesis DMKH2-11 4-amino-2-methyl-5- -undecaprenyl Lys biotin synthase BioB: glucanotransferase: methyltransferase/2- a tRNA photolyase: phosphorylase: JAN01S_RS02415 JAN01S_RS11930 pyrophosphatase: nitrilase: menaquinol-7 lysine--tRNA ligase: JAN01S_RS14150 JAN01S_RS08580 hexosaminidase: synthetase: reductase subunit F: JAN01S_RS05620 oxidase: dehydratase: hydratase: methoxy-6-polyprenyl-1,4- and incorporation I pyridoxal kinase: pyridoxal kinase: diphosphomethylpyrimidine phosphate biosynthesis a (3Z)-alk-3-enoyl-CoA formate JAN01S_RS04150 JAN01S_RS10135 JAN01S_RS08290 JAN01S_RS01540 ssDNA/pppN(pN) acetoacetate fumarate JAN01S_RS04525 [+ 2 isozymes] JAN01S_RS09495 JAN01S_RS09480 JAN01S_RS00735 [+ 2 isozymes] JAN01S_RS06650 JAN01S_RS12470 acnA bifunctional JAN01S_RS11975 an unsulfurated 34 mycothiol JAN01S_RS09270 JAN01S_RS09270 biosynthesis an L-lysyl- α-D-glucopyranose + benzoquinol methylase: (2E,6E)-farnesyl met 5'-deoxyadenosine biotin a thymine in DNA a cytosine in DNA D-glucopyranose maltoheptaose maltohexaose hybrid 1,6-anhydro-N- H NADH FMN + a lysidine demethylmenaquinone thioredoxin pathway IPP Lys [sulfur carrier] n -1 GlcNAc phosphate H keto- oxidation JAN01S_RS03685 an octanoyl-[acp] diphosphate [tRNA ] 1-phosphate acetyl-β-muramate in tRNA Ile2 an alcohol (indol-3-yl)acetate 2-oxoglutarate a carboxylate D-threo-isocitrate pyridoxine pyridoxamine AIR phenylpyruvate methyltransferase/2- lys lipoate-protein phosphomethylpyrimidine di-trans,octa-cis 5'-phosphate 5'-phosphate methoxy-6-polyprenyl-1,4- mycothiol menaquinol-10 ligase B: NAD phosphorylation an oxidized synthase ThiC: -undecaprenyl acyl-CoA a [lipoyl-carrier and dephosphorylation benzoquinol methylase: a (2E)-2-enoyl-CoA β JAN01S_RS14205 pyridoxal JAN01S_RS15710 thioredoxin diphosphate enoyl-CoA Alcohol Degradation 5,10-methylene- 3-methyl-2- a [protein] N-terminal- mercuriphenyl an N-acetyl- - (indole-3-yl) a 2,3,4-saturated a damaged a (1->4)- 6 pyridoxamine 5'- pyridoxamine 5'- JAN01S_RS03685 a 2,3,4-saturated synthetase: amino-parathion maltohexaose D-glucopyranose maltopentaose canavaninosuccinate O-ureido-L- a (1->4)-α-D-glucan a cytosine in DNA methylglyoxal protein] N - HMP-P coenzyme A hydratase: D-hexosaminide asp α-D-glucan phosphate oxidase: phosphate oxidase: + undecaprenyl- fatty acid JAN01S_RS06200 tetrahydromethanopterin oxobutanoate formyl-L-methionine acetate homoserine acetonitrile fatty acyl CoA DNA pyrimidine mycothione octanoyl-L-lysine NAD acyl-CoA JAN01S_RS12535 3-methyl-2-oxobutanoate phosphotriesterase: 4-alpha- glycogen beta- argininosuccinate menaquinol-11 diphosphatase: histidine-- glycerol and glycerophosphodiester degradation peptide deformylase: alkylmercury lyase: argininosuccinate glycogen- DNA glycosylase: glyoxalase: glycogen- reductase: JAN01S_RS07605 JAN01S_RS07605 pyridoxal kinase: hydroxymethylpyrimidine/ his [+ 5 isozymes] dehydrogenase: a 2,3,4-saturated (3R hydroxymethyltransferase: glucanotransferase: phosphorylase: hexosaminidase: lyase: DNA methylase: nitrilase: acyl-CoA oxidase: lipoyl synthase: thioredoxin- JAN01S_RS13500 tRNA ligase: JAN01S_RS15245 JAN01S_RS05880 JAN01S_RS13835 synthase: branching enzyme: JAN01S_RS11935 JAN01S_RS07510 branching enzyme: JAN01S_RS10785 guanylyl molybdenum [+ 4 isozymes] [+ 4 isozymes] JAN01S_RS09270 JAN01S_RS15925 )-3-hydroxyacyl-CoA JAN01S_RS10135 JAN01S_RS08290 JAN01S_RS04525 JAN01S_RS11795 JAN01S_RS01540 JAN01S_RS07560 JAN01S_RS14195 alkaline phosphomethylpyrimidine disulfide reductase: JAN01S_RS01970 JAN01S_RS11380 an N-terminal L- 2+ JAN01S_RS11165 JAN01S_RS08305 JAN01S_RS08305 cofactor biosynthesis di-trans,octa-cis- an L-histidyl- 4-aminophenol diethylthiophosphate formate acetate benzene Hg β JAN01S_RS11515 [+ 2 isozymes] [+ 13 isozymes] kinase: JAN01S_RS15705 [+ 11 isozymes] a glycerophosphodiester maltose maltopentaose α-D-glucopyranose methionyl-[protein] an N-acetyl- - a (1,6)-α-D-glucosyl- a [lipoyl-carrier phosphatase: NAD kinase: geranylgeranyl JAN01S_RS14595 [tRNA His ] a 2,3,4-saturated a 2,3,4-saturated (3S THMPT 2-dehydropantoate maltotetraose an alcohol fumarate L-canavanine a 5-methylcytosine a (2E)-2- an apyrimidinic MoO - undecaprenyl phosphate 1-phosphate D-hexosamine canavaninosuccinate α a glycogen 2 6 JAN01S_RS06235 His fatty acyl CoA )-3-hydroxyacyl-CoA (1,4)- -glucan (indol-3-yl)acetate (R)-lactate protein]-N - PLP JAN01S_RS07010 diphosphate a tRNA in DNA enoyl-CoA site in DNA mycothione molybdopterin HMP-PP lipoyl-L-lysine [+ 4 isozymes] menaquinol-9 biosynthesis biosynthesis glycerol glycerophosphodiester cofactor molybdopterin- menaquinol-6 biosynthesis menaquinol-8 biosynthesis (2E,6E)-farnesyl a reduced Degradation/Utilization/Assimilation - Other phosphodiesterase: guanine dinucleotide a plant soluble a (1->4)- a (1->4)- NADP + diphosphate thioredoxin JAN01S_RS06475 5-amino-4- D-glucopyranose maltohexaose 1-18:1-2- a dipetide with an N- α (2S)- phosphoenol biosynthesis demethylmenaquinol-9 geranylgeranyl glycerol kinase: PRPP methyl parathion α an -limit dextrin H O acetyl-CoA D-glucopyranose 2-deoxy-D-ribose L-cysteate demethylmenaquinol-6 demethylmenaquinol-8 demethylmenaquinol- imidazolecarboxyamide heteroglycan lysophosphatidylethanolamine -D-glucan a tRNA precursor terminal L-aspartate 2 ethylmalonyl-CoA pyruvate α-D-glucan protein A: bifunctional pyrophosphate octane oxidation JAN01S_RS05910 [+ 2 isozymes] adenine 4-alpha- alpha-glucosidase: alpha-glucosidase: acetyl-CoA bifunctional bifunctional 8 biosynthesis I gly a 2,3,4-saturated a 2,3,4-saturated phosphotriesterase: lysophospholipase: dipeptidase: 4-alpha- glucose sorbosone methylmalonyl- aspartate glycogen- demethylmenaquinol- acrylonitrile glucanotransferase: JAN01S_RS01860 JAN01S_RS01860 ribonuclease D: ribokinase: guanylyl JAN01S_RS10920 demethylmenaquinone synthase: glycine--tRNA ligase: fatty acyl CoA 3-oxoacyl-CoA phosphoribosyltransferase: JAN01S_RS15245 JAN01S_RS10600 JAN01S_RS14255 glucanotransferase: hydrolase: dehydrogenase: pyruvate kinase: branching enzyme: 9 biosynthesis demethylmenaquinone demethylmenaquinone all-trans- degradation I a (1->4)- JAN01S_RS13845 CoA epimerase: aminotransferase: molybdenum methyltransferase/2- JAN01S_RS03765 2-carboxy-1,4- JAN01S_RS08640 JAN01S_RS01990 JAN01S_RS10135 sn-glycero-3- JAN01S_RS13590 JAN01S_RS08965 JAN01S_RS03380 Gly sn-glycerol 3-phosphate D-glucopyranose maltopentaose D-glucopyranose a proteinogenic JAN01S_RS10135 JAN01S_RS01495 JAN01S_RS08305 all-trans- methyltransferase/2- methyltransferase/2- octaprenyl a glycyl-[tRNA ] NADH dimethylthiophosphate 4-nitrophenol a plant soluble oleate α-D-glucan a nucleoside 5'- asp JAN01S_RS08350 JAN01S_RS14490 cofactor 2-carboxy-1,4- methoxy-6-polyprenyl-1,4- GGPP naphthoquinol AICAR maltose phosphoethanolamine a tRNA amino acid a α-limit dextrin acetate 2-deoxy-D-ribose methoxy-6-polyprenyl-1,4- methoxy-6-polyprenyl-1,4- thiamine salvage III diphosphate1,4-dihydroxy- acrylonitrile heteroglycan monophosphate D-glucono- (2R)- starch nonaprenyl benzoquinol methylase: a tRNA Gly with short branches 3-sulfopyruvate pyruvate naphthoquinol benzoquinol methylase: benzoquinol methylase: 2-naphthoate glycerol-3-phosphate 1,5-lactone ethylmalonyl-CoA 5-phosphate diphosphate 1,4-dihydroxy- JAN01S_RS03685 JAN01S_RS03685 JAN01S_RS03685 polyprenyltransferase: a reduced dehydrogenase: 2-naphthoate thiamine menaquinol-9 n-octane menaquinol-6 menaquinol-8 rubredoxin acetyl-CoA JAN01S_RS05915 polyprenyltransferase: JAN01S_RS03605 acrylamide L-4-hydroxyphenylglycine-L- a 1-(1-alkenyl) thiamin a 1-acyl-sn-glycero- an O-acetyl- a debranched β-D-fructose 1,6- cytidine demethylmenaquinol-8 maltotetraose D-glucopyranose maltoheptaose a glycogen an aryl dialkyl chitin maltose α-D-ribofuranose pyrazinamide JAN01S_RS03605 pyrophosphokinase: alkane 1- DHAP arginyl-D-4-hydroxyphenylglycine- -sn-glycero-3- ADP-ribose a protein α-limit dextrin methionine-- amidase: 3-phosphocholine phosphate bisphosphate demethylmenaquinol-9 JAN01S_RS07000 met monooxygenase: L-seryl-L 4-hydroxyphenylglycine phosphocholine 4-alpha- alpha-glucosidase: glucoamylase: O-acetyl-ADP- beta- cytidine deaminase: trypsin: JAN01S_RS12065 lysophospholipase: phosphotriesterase: glycogen fructose 1,6- amidase: thiamine tRNA ligase: JAN01S_RS05620 lysoplasmalogenase: glucanotransferase: JAN01S_RS01860 JAN01S_RS03555 ribose deacetylase: metalloprotease: hexosaminidase: alpha-glucosidase: ribokinase: JAN01S_RS16115 JAN01S_RS10600 JAN01S_RS15245 phosphorylase: bisphosphatase: JAN01S_RS05620 JAN01S_RS02715 diphosphate JAN01S_RS07165 an L-methionyl- [+ 2 isozymes] trypsin: JAN01S_RS00745 JAN01S_RS13235 JAN01S_RS10135 JAN01S_RS14265 JAN01S_RS11830 JAN01S_RS04525 JAN01S_RS01860 JAN01S_RS08965 [+ 2 isozymes] D-4-hydroxyphenylglycine-L- sn-glycero-3- D-glucopyranose maltohexaose sn-glycero-3- D-glucopyranose a glycogen a dialkyl JAN01S_RS08290 JAN01S_RS10990 Met a carboxylate a phenol N-acetyl-D- [+ 2 isozymes] [initiator tRNA ] L-4-hydroxyphenylglycine-L-arginine a fatty aldehyde maltose maltotriose phosphocholine phosphate a peptide a peptide α α uridine Met acrylate selenate reduction Inorganic Nutrient Metabolism seryl-L 4-hydroxyphenylglycine phosphocholine acetate ADP-D-ribose chitin -D-glucopyranose -D-ribose pyrazine-2- initiator tRNA 1-octanol hydrogen sulfide glucosamine D-glucopyranose F6P 1-phosphate 5-phosphate carboxylate biosynthesis I selenate sulfate a β-D- cys a 1-O-(alk-1-enyl)-sn-glycero- 3-hydroxy- a (1->4)- a debranched a glucosylated α adenylyltransferase: HMG-CoA a maltodextrin D-glucopyranose maltopentaose maltotriose H O (S)-citramalate sec an alkylmercury carbonic acid -amylose 3-phosphoethanolamine fructofuranoside isobutanoyl-CoA 2 a tRNA ser α-D-glucan α-limit dextrin glycogenin 1-octanal JAN01S_RS07685 4-alpha- alpha-glucosidase: invertase: alpha-glucosidase: lysoplasmalogenase: hydroxymethylglutaryl-CoA 3-hydroxyisobutyryl- citramalate synthase: alkylmercury lyase: carbonic anhydrase: glycogen- glycogen- glycogen- glucanotransferase: JAN01S_RS01860 JAN01S_RS13825 JAN01S_RS01860 serine--tRNA ligase: glucoamylase: sulfate JAN01S_RS13235 lyase: JAN01S_RS12110 CoA hydrolase: JAN01S_RS01425 JAN01S_RS13835 JAN01S_RS05035 branching enzyme: branching enzyme: branching enzyme: 4-trimethylaminobutyraldehyde 3-mercaptopyruvate JAN01S_RS10135 JAN01S_RS15980 JAN01S_RS03555 adenylyltransferase sn-glycero-3- D-glucopyranose maltotetraose a glycoside β-D-fructofuranose D-glucopyranose maltose JAN01S_RS11715 2+ dehydrogenase: a fatty aldehyde acetyl-CoA acetoacetate acetate pyruvate an L-seryl- Hg an alkane CO H O JAN01S_RS08305 JAN01S_RS08305 JAN01S_RS08305 phosphoethanolamine maltose a maltodextrin 3-hydroxy- 2 2 small subunit: urea cycle 3-mercaptopyruvate [tRNA sec ] JAN01S_RS00040 isobutanoate a GlgE-glycogen D-glucopyranose a glycogen amylopectin JAN01S_RS07690 sulfurtransferase: adenosine 5'- octanoate JAN01S_RS08630 phosphoselenate arg long-chain fatty hydrogen sulfide acid--CoA ligase: ammonium JAN01S_RS08870 argininosuccinate carbamoyl [+ 5 isozymes] selenite lyase: JAN01S_RS11165 phosphate octanoyl-CoA synthase phosphate acquisition L-arginino- large L-ornithine succinate subunit: carB a phosphate selenodiglutathione monoester [+ 2 isozymes] bifunctional RNase carbamoyl H/acid phosphatase: JAN01S_RS11445 ornithine phosphate argininosuccinate phosphate carbamoyltransferase: synthase: glutathioselenol JAN01S_RS11155 JAN01S_RS11515 L-citrulline

hydrogen selenide a branched- a branched- chain chain amino acid amino acid Ni 2+ phosphate glutamate a branched- a branched- an oligopeptide an amino an amino an amino an amino 3,5- a C4- chain chain cis-vaccenoyl-CoA cis-vaccenoyl-CoA cis-vaccenoyl-CoA cis-vaccenoyl-CoA cis-vaccenoyl-CoA cis-vaccenoyl-CoA phosphate glycine betaine a tricarboxylate a macrolide enterobactin chromate molybdate daunorubicin acid acid acid acid an antibiotic ammonium ferrichrome dimethoxytoluene dicarboxylate a 2,3,4-saturated fatty acyl CoA a 2,3,4-saturated fatty acyl CoA a 2,3,4-saturated fatty acyl CoA a 2,3,4-saturated fatty acyl CoA a 2,3,4-saturated fatty acyl CoA a 2,3,4-saturated fatty acyl CoA phosphate L-proline betaine predicted amino acid predicted amino acid ABC ABC predicted ABC predicted predicted transporter transporter transporter of ABC ABC RS08715 RS00485 RS12860 RS04950 RS13955 RS05505 RS14515 RS08705 of a RS09020 of a RS09015 RS05940 RS09930 RS09680 RS08545 RS07305 RS08870 RS01595 RS09580 RS09575 RS06200 RS11355 RS08225 RS05480 RS15770 RS11720 RS13535 a dipeptide/an transporter transporter branched- branched- oligopeptide/ of phosphate of glutamate chain chain Ni2+ 3,5- a C4- a branched- a branched- cis-vaccenate cis-vaccenate cis-vaccenate cis-vaccenate cis-vaccenate cis-vaccenate glycine betaine a tricarboxylate a macrolide enterobactin chromate molybdate daunorubicin amino acid amino acid an amino an amino an amino an amino an antibiotic ammonium ferrichrome dimethoxytoluene dicarboxylate chain chain a 2,3,4-saturated fatty acid a 2,3,4-saturated fatty acid a 2,3,4-saturated fatty acid a 2,3,4-saturated fatty acid a 2,3,4-saturated fatty acid a 2,3,4-saturated fatty acid phosphate L-proline betaine acid acid acid acid amino acid amino acid phosphate phosphate glutamate Ni 2+ a branched- a branched- an oligopeptide chain chain amino acid amino acid This diagram was automatically generated by SRI International Pathway Tools version 25.0, authors S. Paley and P.D. Karp.