285 Safiya Et Al., 2019

Total Page:16

File Type:pdf, Size:1020Kb

285 Safiya Et Al., 2019 BAJOPAS Volume 11 Number 2 December, 2018 http://d x.doi.org/10.4314/bajopas.v 11i2.39 Bayero Journal of Pure and Applied Sciences, 11(2): 279 - 285 Received: July, 2018 Accepted: December, 2018 ISSN 2006 – 6996 A SURVEY OF BACTERIA AND FUNGI ASSOCIATED WITH SUSPECTED CASES OF MENINGITIS AMONG CHILDREN ATTENDING SOME SELECTED HOSPITALS IN KANO *Bello, S ., Mohammed, B. and Muhammad, Y. Department of Microbiology , Faculty of Life Sciences, Bayero University, Kano Correspondence Author: [email protected] ; 08064816750 ABSTRACT Bacterial meningitis is one of the most potentially serious infections occurring in the Children age group, with a high incidence of acute complications and risk of l ong-term morbidity and mortality. The aim of the research was to Survey the Bacteria and Fungi Associated with Suspected Cases of Meningitis among Children Attending Some Selected Hospitals in Kano State, Nigeria. Three hundred samples of cerebrospinal flu ids (CSF) were collected through lumbar puncture from Children aged 0-12years suspected of having Meningitis. The samples were subjected to macroscopic examination, microscopic examination, culture tests. Bacterial and fungal isolates were confirmed by bio chemical tests and serology. The isolates were subjected to antimicrobial sensitivity tests using standard techniques. The results obtained were analysed and a prevalence of 8.0% was obtained for bacteria while that of fungi was 0.33%. Analysis of the result according to age group showed that Children in the age group 0 -2years had the highest percentage of Meningitis (7.7%:23/300) while those in the age grougroupp 3 -4 years (0. 3%:1/300) and 11 -12 years had the lowest (0.3%:1/300). However there were no significant differences between the age group and the prevalence of Meningitis (0.1042). Analysis of the result accoaccordrdinging to occurrence of isolated organism showed that gram negat ive Bacteria Heamophilus influenzae type b had the highest frequency of occurrence (48:12/25) while thethe least were Neisseria meningitidis C/W135 (4%:1/25), Salmonella paratyphi C (4%:1/25), Streptococcus species (Viridans group) (4%:1/25) , Candida famata (4%:1/25). Analysis of the result in relation to the study sites showed that the highest number of positive cases were obtained from Muh ammad Specialist Hospital (MMSH) (52%:13/25) while the lowest from Aminu Kano TeachiTeachingng Hospiatal (AKTH) (4%:1/25). Howeve r there was a significant difference between the study sites and the number of positive cases (0.004). Antibiogram of the bacterial isolates showshoweded that ceftriaxone (91.7%:11/12) and ciprofloxacin (91.7%:11/12) were found to be most sensensitivesitive to Haemophilu s influenzae type b and least sensitive to trimethoprim sulfamethoxazole (8.3%:1/12). The yeast, Candida famata was found to be (100%:1/1) sensitive to ketaconazole, fflluconazole,uconazole, itraconazole and amphoteric in B. It can be concluded that the overall prevale nce of Bacteria in the study sites was 8.0% while that of fungi was 0.33%. Gram negative bacteria Haemophilus influenzae type b were found to be the major cause of meningitis in the study sites which are most sensitive to cefriaxone (91.7%:11/12) and cipro floxacin (91.7%:11/12) and least sensitive to trimethtrimethoprimoprim -sulfamethoxazole (8.3%:1/12). Keywords: Cerebrospinal fluid, Hospitals, isolates, meningitis, occurrence, paediatrics, sensitivity. INTRODUCTION pediatric population but may occur in Meningitis is an inflammation of the protective immunocompromised such as Children with cancer, membranes covering the brain and spinal cord, known previous neurosurgery, or cranial trauma or collectively as the meninges (Willey et al ., 2008; CDC, premature infants with low birth rates (Mann and 2014; Pick, et al ., 2016; Hasbun, 2017). The Jackson, 2008; Faust, 20 15; CDC, 2016). inflammation may be caused by infection with viruses, Kano state of Nigeria in sub- Saharan Africa is located bacteria, fungi, and parasites (Reid and Fallon, 1992; in the Meningitis belt where seasonal meningococcal Ginsberg, 2004; Cha´vez-Bueno and McCracken, epidemics occur during the dry season (Sultan et al., 2005; Willey et al ., 2008; Hasbun, 2017). 2005; WHO, 2015; CDC, 2014; Abdussalam et al., Bacterial Meningitis is one of t he most potentially 2014). Despite the advancement in diagnosis and serious infections in infants and older Children treatment of infectious diseases, meningitis is stillstill because it is associated with a high rate of acute considered as an important cause of mortality and complications, risk of long-term morbidity and morbidity, especially in the Children population (Tac(Taconon mortality (HudeckovaIde et al ., 2010; Ide and and Flower, 2012; Águeda et al., 2013: Abdulkareem Awopeju, 2015; Muller, 2016; Pick et al ., 2016; et al. , 2014). Hasbun, 2017). Fungal Meningitis is rare in the 279 BAJOPAS Volume 11 Number 2 December, 2018 Therefore, a regular surveillance of the etiology and Macroscopic Examination of Cerebrospinal Fluid their antibiotic susceptibility is imperative for Cerebrospinal fluid (CSF) samples were observed appropriate case management and infection control. macroscopically to determined the presence of The aim of the research was to Survey the Bacteria turbidity, blood, pigment and clots (Cheesbrough, and Fungi Associated with Suspected Cases of 2010). Meningitis among Children attending Aminu Kano Latex Agglutination Test Teaching Hospital (AKTH), Murtala Muhammad Directigen TM Meningitis combo Test is a presumptive Specialist Hospital (MMSH) and Hasiya Bayero Latex Agglutination test for the direct qualitative Pediatric Hospital (HBPH) in Kano, State. detection of antigens to Haemophilus influenzae type b, Streptococcus pneumoniae , Escherichia coli , group MATERIALS AND METHODS B Streptococcus and Neisseria meningitis group A, B, Study Area C, Y, or W135 in Cerebrospinal fluid. Three hospitals were selected for the study include; The test was conducted using (BD Directigen TM Aminu Kano Teaching Hospiatal (AKTH) located in Ireland-0214011JAA) test kit according to Tarauni Local Government Area of Kano State, Manufacturer’s instruction. A drop of positive control Murtala Muhmmad Specialist Hospital (MMSH) and was dispensed onto circles 1 through 6 of row, Hasiya Bayero Pediatric Hospital (HBPH) in Municipal negative control onto circles 1 through 6 of row and Local Government Area of Kano State, located at 50microlitre of test sample (CSF) was dispensed onto latitude 10 o 33N to 11 o 15N and longitude 34 oCE to 8 o circles 1 through 6 of sample rows and in circles 20CE (NPC, 2006).The Hospitals were strategically labeled “A” and “B” on the test card. Rows positive located for access to both urban and rural population and negative are used for control. Reagent A (control from the 44 Local Governments Areas of Kano State. latex suspension) was dispense onto the “A” Circle, Study Population Reagent “B” (control latex suspension) onto the ‘’B’’ The study population comprised of Children with circle. A drop of latex suspension Reagent 1 was suspected cases of Meningitis attending Aminu Kano dispensed onto the circle in column 1, rows positive, Teaching Hospital (AKTH), Murtala Muhmmad negative and sample. The procedure was repeated for Specialist Hospital (MMSH) and Hasiya Bayero the remaining latex suspensions (Reagent 2-6) in Paediatric Hospital (HBPH) in Kano State. rows positive, negative and sample columns. The Inclusion Criteria samples and latex reagents in each circle were mixed Children of both sexes aged 0-12years with suspected with a different plastic stirrer then placed on a rotator cases of Meningitis whose parents or caregivers at a speed of 12rpm for 10mins and read immediately consented were enrolled for the study. under a high intensity incandescent light. Positive test Exclusion Criteria shows agglutination. Any degree of agglutination Non- consenting parents or caregivers of Children present in one of the latex reagents indicates the from both sexes aged 0-12 years and Children above presence of corresponding antigen. 12years were excluded in the study. Agglutination in two or more latex reagents or the Sample Size Determination corresponding Reagent A (Reagent 1-5) or Reagent B Sample size was 200 obtained using the formular (Reagent 6) renders the reaction uninterpretable. below Negative test shows no agglutination. Positive control Where; (Lwanga and Lemeshow, 1991) yield strong agglutination within 10 minutes, negative N = minimum sample size control shows no agglutination. Agglutination in any z = point of normal distribution curve equivalent at of the negative control circles renders the reaction 95% (1.960) confidence interval uninterpretable. q = complementary probability of q = 1- p Microscopic Examination of Cerebrospinal Fluid p = prevalence rate from previous work = 13.7% Gram Staining and Auramine-Phenol Fluorochrome (Mado et al. , 2013) Staining for the Detection of Mycobacterium d = degree of precision margin of error = 0.05 tuberculosis were carried out (Cheesbrough, 2010). N= (1.960) 2x 0.137 x (1-0.137) Culture (0.05) 2 A centrifuged sediment of cerebrospinal fluid was = 3.8416x0.137 x 0.863 inoculated onto blood agar, chocolate agar, 0.0025 MacConkey for bacterial culture and Sabauroud = 0.4541962096 37 dextrose agar for fungal culture (Cheesbrough, 2010). 0.0025 Colonies observed were further characterized by Gram = 181.67848384 staining, biochemical tests and serological tests. N = 181 Based on the local prevalence obtained
Recommended publications
  • Pasteurella Multocida Isolated from Cattle
    Journal of Applied Pharmaceutical Science Vol. 3 (04), pp. 106-110, April, 2013 Available online at http://www.japsonline.com DOI: 10.7324/JAPS.2013.3419 ISSN 2231-3354 Antibiotic Susceptibility and Molecular Analysis of Bacterial Pathogen Pasteurella Multocida Isolated from Cattle Azmat Jabeen, Mahrukh Khattak, Shahzad Munir*, Qaiser Jamal, Mubashir Hussain Department of Microbiology, Kohat University of Science and Technology, Kohat, Khyber Pakhtunkhwa, Pakistan. ARTICLE INFO ABSTRACT Article history: Pasteurella multocida is a Gram negative, non motile and coccobacillus bacterium. It has 5 strains i.e. A, B, D, Received on: 01/02/2013 E and F and 16 serotypes (1-16). In present study, we analyzed Pasteurella multocida B: 2 strains, responsible Revised on: 19/02/2013 for Hemorrhagic Septicemia (HS) in cattle, on morphological/microbial, biochemical, molecular level and to Accepted on: 15/03/2013 check the antibiotic sensitivity of the Pasteurella multocida. Microbial analysis showed that while grown on Available online: 27/04/2013 Brain Heart Infusion agar plates and Blood Agar Base Medium, grayish lustrous colonies of Pasteurella multocida were observed. Gram staining showed that Pasteurella multocida are gram negative. Microscopic Key words: observations revealed it to be coccobacillus and it was non- motile. Identification was conducted by Pasteurella multocida, conventional biochemical tests and percentage identification of Analytical Profile Index was 96 %. Antibiotic Hemorrhagic Septicemia, sensitivity with different antibiotics was checked by disk diffusion method and was found resistant to Analytical Profile Index, Augmentin, Amoxicillin and Aztreonam and was more susceptible to Ceftiofur. On molecular level its DNA Antibiotic sensitivity. was extracted and was run with marker having range from 0.5 – 10 kb.
    [Show full text]
  • Physico-Chemical and Bacteriological Quality of Water, And
    PHYSICO-CHEMICAL AND BACTERIOLOGICAL QUALITY OF WATER, AND ANTIMICROBIAL SUSCEPTIBILITY OF PATHOGENIC ISOLATES FROM SELECTED WATER SOURCES IN SAMBURU SOUTH. BY JEOPHITA JUNE MWAJUMA (B.Sc, P.G.D.E) REG. NO. I56/7341/02 DEPARTMENT OF PLANT AND MICROBIAL SCIENCES A thesis submitted in partial fulfillment of the requirements for the award of the degree of Master of Science (Microbiology) in the School of Pure and Applied Sciences, Kenyatta University April 2010 ii DECLARATION I, Jeophita June Mwajuma, declare that this thesis is my original work and has not been presented for the award of a degree in any other University or any other award. Signature…………………………………... Date………………………….. We confirm that the work reported in this thesis was carried out by the candidate under our supervision. SUPERVISORS: Prof. Paul Okemo Department of Plant and Microbial Sciences Kenyatta University Signature…………………………………... Date………………………….. Dr. Alexander Njue Department of Plant and Microbial Sciences Kenyatta University Signature…………………………………... Date………………………….. Prof. Kiplagat Kotut Department of Plant and Microbial Sciences Kenyatta University Signature…………………………………... Date………………………….. iii DEDICATION For my girls, Neema and Wema. Babies, the sky is the limit! iv Formatted: Centered, Indent: Left: 0.25", 1. ACKNOWLEDGEMENT No bullets or numbering I wish to thank my supervisors Prof. Paul Okemo, Dr. Alexander Njue and Prof. Kiplagat Kotut for their expert advice and encouragement throughout the period of this study. My gratitude also goes to Earthwatch Institute for funding my research work through the Samburu Communities, Water and Wildlife project. I also wish to thank KEMRI, Welcome Trust Laboratories Kilifi, Wamba Mission Hospital and Mombasa Polytechnic University College for providing me with laboratory space and analytical tools.
    [Show full text]
  • Resistant Gram-Negative Bacteria in Urine of Pregnant Women Attending Antenatal Clinic of Mother and Child Hospital, Ondo, Nigeria
    Vol. 15(5), pp. 209-216, May, 2021 DOI: 10.5897/AJMR2021.9491 Article Number: FAE2CD666760 ISSN: 1996-0808 Copyright ©2021 Author(s) retain the copyright of this article African Journal of Microbiology Research http://www.academicjournals.org/AJMR Full Length Research Paper Phenotypic and molecular characterization of multiple- resistant gram-negative bacteria in urine of pregnant women attending antenatal clinic of Mother and Child hospital, Ondo, Nigeria 1 1 2* Eunice Damilola Wilkie , Anthonia Olufunke Oluduro , Thonda Oluwakemi Abike and Chidinma Vivian Chukwudum1 1Department of Microbiology, Faculty of Sciences, Obafemi Awolowo University, Ile-Ife, Osun State, Nigeria. 2Department of Biological Sciences, Faculty of Sciences, Kings University, Odeomu, Osun State, Nigeria. Received 27 January, 2021; Accepted 12 March, 2021 Phenotypic and molecular characterization of multiple antibiotic resistant Gram-negative bacteria in urine samples of pregnant women in Mother and Child Hospital, Nigeria was reported. In the study, 407 apparently healthy pregnant women were recruited. Structured questionnaire was administered to the patients to obtain their socio-demographic information and the medical history. Urine samples were collected, processed and analysed using standard microbiological procedures. Detailed identification of the bacteria isolates was done using biochemical characterization using Bergey’s Manual of Determinative Bacteriology and Analytical Profile Index (API) Kit. The antimicrobial susceptibility testing of the bacteria isolates was carried out using the Kirby-Bauer’s disk diffusion technique. Detection of the beta lactamase resistance genes (bla CTX-M and Tet A) was done by polymerase chain reactions (PCR) with appropriate primers. The following Gram-negative bacteria were recovered comprising Pseudomonas aeruginosa 48 (34.0%), Escherichia coli 30 (21.3%), Klebsiella sp.
    [Show full text]
  • Characterization, Prevalance and Antimicrobial Susceptibility Pattern
    International Journal of Clinical Obstetrics and Gynaecology 2018; 2(6): 31-42 ISSN (P): 2522-6614 ISSN (E): 2522-6622 © Gynaecology Journal Characterization, prevalance and antimicrobial www.gynaecologyjournal.com 2018; 2(6): 31-42 susceptibility pattern of bacterial uropathogens isolated Received: 21-09-2018 Accepted: 24-10-2018 from pregnant women at Lahore general hospital, Lahore, Pakistan Rabia Habib Institute of Molecular Biology and Biotechnology, University of Lahore, Pakistan Rabia Habib, Muhammad Danish Mehmood, Sana Noreen, Huma Anwar, Mehreen Gul, Nazia Ayub and Almas Raza Muhammad Danish Mehmood Ottoman Pharma (Immuno Division), Raiwind Road Lahore, Abstract Pakistan Urinary tract infection (UTI) is common in ladies living in developing countries which may progress to complications such as pyelonephritis and preterm delivery during pregnancy. The present study provides an Sana Noreen insight for causative agent of UTI, their prevalence in pregnant ladies and its association with age, Ottoman Pharma (Immuno metabolic disorder and gestational period. Total of 375 midstream samples were collected from pregnant Division), Raiwind Road Lahore, women, pure culture were segregated on selective media and identified through analytical profile index Pakistan (API) to evaluate prevalence of uropathogens in UTI and ASB patients. Isolated uropathogenic E. coli were further characterized by polymerase chain reaction (PCR) using specific primers for genotype cjrA, cjrB, Huma Anwar and cjrC. Among 375 midstream urine samples of pregnant women, 160 cases of UTI and ASB (≥105 Ottoman Pharma (Immuno CFU) were recorded. API analysis of such samples showed 65(40.6%), 55(34.35%) and 40(25%) of E. coli, Division), Raiwind Road Lahore, Pakistan Enterococci and Staphylococci respectively.
    [Show full text]
  • Rapid Identification and Antimicrobial Susceptibility Profiling of Anaerobic Bacteria in Clinical Specimens
    Egyptian Journal of Medical Microbiology, July 2012 Vol. 21, No. 3 Rapid Identification and Antimicrobial Susceptibility Profiling of Anaerobic Bacteria in Clinical Specimens *Wafaa N. El-tayab, **Fatma Alzhraa M. Gomaa *Associate Professor of Microbiology & Immunology, Faculty of Pharmacy Misr International University, Cairo, Egypt **Associate Professor of Microbiology & Immunology, Faculty of Pharmacy for girls- Al-Azhar University, Egypt ABSTRACT Objective: The aim of the current study was to evaluate the ability of API 20A, and Microscan Rapid- Anaerobe identification system to identify a spectrum of clinically significant anaerobic isolates against the gold standard conventional method. Also to determine the antimicrobial susceptibility of anaerobic isolates using different methods. Materials and Methods: Anaerobes were isolated from the different clinical specimens and all isolates were initially identified by conventional tests. Identification of isolates were made also by using the API 20A and Microscan systems. Antimicrobial susceptibility of all isolates were determined by disc diffusion and broth-disk method and compared to MIC determined by broth dilution method. Results: A total of 51 isolates were recovered from clinical specimens. API 20A and Microscan correctly identified 70.6% and 82.4% of strains to species level respectively. Eight strains were misidentified by API 20A and 9 were misidentified by Microscan. B. fragilis group isolates were the most encountered clinically significant isolates among the gram-negative anaerobes. Penicillin and ampicillin had poor activity against B. fragilis group, Prevotella spp. Eubacterium spp. and Veillonella spp. Members of the B. fragilis group were more resistant to cefoxitin, than other anaerobes (66.6%). Resistance to clindamycin varied among the species range from 11.1% to 50%.
    [Show full text]
  • Pdf 1032003 6
    Peer-Reviewed Journal Tracking and Analyzing Disease Trends pages 1891–2100 EDITOR-IN-CHIEF D. Peter Drotman Managing Senior Editor EDITORIAL BOARD Polyxeni Potter, Atlanta, Georgia, USA Dennis Alexander, Addlestone Surrey, United Kingdom Senior Associate Editor Barry J. Beaty, Ft. Collins, Colorado, USA Brian W.J. Mahy, Atlanta, Georgia, USA Martin J. Blaser, New York, New York, USA Christopher Braden, Atlanta, GA, USA Associate Editors Carolyn Bridges, Atlanta, GA, USA Paul Arguin, Atlanta, Georgia, USA Arturo Casadevall, New York, New York, USA Charles Ben Beard, Ft. Collins, Colorado, USA Kenneth C. Castro, Atlanta, Georgia, USA David Bell, Atlanta, Georgia, USA Thomas Cleary, Houston, Texas, USA Charles H. Calisher, Ft. Collins, Colorado, USA Anne DeGroot, Providence, Rhode Island, USA Michel Drancourt, Marseille, France Vincent Deubel, Shanghai, China Paul V. Effl er, Perth, Australia Ed Eitzen, Washington, DC, USA K. Mills McNeill, Kampala, Uganda David Freedman, Birmingham, AL, USA Nina Marano, Atlanta, Georgia, USA Kathleen Gensheimer, Cambridge, MA, USA Martin I. Meltzer, Atlanta, Georgia, USA Peter Gerner-Smidt, Atlanta, GA, USA David Morens, Bethesda, Maryland, USA Duane J. Gubler, Singapore J. Glenn Morris, Gainesville, Florida, USA Richard L. Guerrant, Charlottesville, Virginia, USA Patrice Nordmann, Paris, France Scott Halstead, Arlington, Virginia, USA Tanja Popovic, Atlanta, Georgia, USA David L. Heymann, Geneva, Switzerland Jocelyn A. Rankin, Atlanta, Georgia, USA Daniel B. Jernigan, Atlanta, Georgia, USA Didier Raoult, Marseille, France Charles King, Cleveland, Ohio, USA Pierre Rollin, Atlanta, Georgia, USA Keith Klugman, Atlanta, Georgia, USA Dixie E. Snider, Atlanta, Georgia, USA Takeshi Kurata, Tokyo, Japan Frank Sorvillo, Los Angeles, California, USA S.K. Lam, Kuala Lumpur, Malaysia David Walker, Galveston, Texas, USA Bruce R.
    [Show full text]
  • API 20E Manufacture Instructions
    REF 20 100 / 20 160 07584D - GB - 2002/10 ® IVD 20 E Identification system for Enterobacteriaceae and other non-fastidious Gram-negative rods SUMMARY AND EXPLANATION Material : API 20 E is a standardized identification system for - Pipettes or PSIpettes Enterobacteriaceae and other non-fastidious, Gram- - Ampule protector negative rods which uses 21 miniaturized biochemical - Ampule rack tests and a database. The complete list of those - General microbiology laboratory equipment organisms that it is possible to identify with this system is given in the Identification Table at the end of this package POSSIBLE ADDITIONAL REAGENTS : insert. - API OF Medium (Ref. 50 110) : Test for the determination of fermentative or oxidative PRINCIPLE metabolism. The API 20 E strip consists of 20 microtubes containing - API M Medium (Ref. 50 120) : dehydrated substrates. These tests are inoculated with Test for motility of facultative anaerobic bacteria. a bacterial suspension that reconstitutes the media. During incubation, metabolism produces color changes WARNINGS AND PRECAUTIONS that are either spontaneous or revealed by the addition of • For in vitro diagnostic use and microbiological reagents. control. The reactions are read according to the Reading Table • For professional use only. and the identification is obtained by referring to the • This kit contains products of animal origin. Certified Analytical Profile Index or using the identification software. knowledge of the origin and/or sanitary state of the animals does not totally guarantee the absence of CONTENT OF THE KIT transmissible pathogenic agents. It is therefore Kit for 25 tests (ref. 20 100) recommended that these products be treated as - 25 API 20 E strips potentially infectious, and handled observing the usual - 25 incubation boxes safety precautions (do not ingest or inhale).
    [Show full text]
  • Biochemical Characterization and Identification of Bacterial Strains
    Biochemical characterization and identification of bacterial strains isolated from drinking water sources of Kohat, Pakistan Tassadaq Hussain, Aneela Roohi, Shehzad Munir, Iftikhar Ahmed, Jafar Khan, Veronique Edel-Hermann, Kil Yong Kim, Muhammad Anees To cite this version: Tassadaq Hussain, Aneela Roohi, Shehzad Munir, Iftikhar Ahmed, Jafar Khan, et al.. Biochemical characterization and identification of bacterial strains isolated from drinking water sources ofKohat, Pakistan. African Journal of Microbiology Research, Academic Journal, 2013, 7 (16), pp.1579-1590. 10.5897/AJMR12.2204. hal-01005074 HAL Id: hal-01005074 https://hal.archives-ouvertes.fr/hal-01005074 Submitted on 29 May 2020 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Vol. 7(16), pp. 1579-1590, 16 April, 2013 DOI: 10.5897/AJMR12.2204 ISSN 1996-0808 ©2013 Academic Journals African Journal of Microbiology Research http://www.academicjournals.org/AJMR Full Length Research Paper Biochemical characterization and identification of bacterial strains isolated from drinking water sources of Kohat, Pakistan Tassadaq Hussain1, Aneela Roohi1, Shehzad Munir1, Iftikhar Ahmed2, Jafar Khan1, Veronique Edel-Hermann3, Kil Yong Kim4 and Muhammad Anees1* 1Department of Microbiology, Kohat University of Science and Technology, Kohat, Pakistan.
    [Show full text]
  • Factors Affecting Experimental Streptococcus Agalactiae Infection in Tilapia, Oreochromis Niloticus
    View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Stirling Online Research Repository FACTORS AFFECTING EXPERIMENTAL STREPTOCOCCUS AGALACTIAE INFECTION IN TILAPIA, OREOCHROMIS NILOTICUS THESIS SUBMITTED TO THE UNIVERSITY OF STIRLING FOR THE DEGREE OF DOCTOR OF PHILOSOPHY BY DILOK WONGSATHEIN 27 SEPTEMBER 2012 INSTITUTE OF AQUACULTURE Declaration Declaration I declare that this thesis has been composed in its entirety by me. Except where specifically acknowledged, the work described in this thesis has been conducted by me and has not been submitted for any other degree. Signature: _________________________________________ Signature of supervisor: _________________________________________ Date: _________________________________________ II Abstract Abstract Streptococcus agalactiae infection is one of the major disease problems affecting farmed tilapia (Oreochromis niloticus) worldwide. Tilapia are highly susceptible to this disease which results in mortality of up to 70% over a period of around 7 days and significant economic losses for farmers. Affected tilapia commonly present with an irregular behaviour associated with meningoencephalitis and septicaemia. Currently, factors affecting the virulence and transmission of S. agalactiae in fish including tilapia are poorly understood. Reports from natural outbreaks of S. agalactiae infection on tilapia farms have suggested larvae and juvenile or fish smaller than 20 g are not susceptible. In addition, there is variability in individual response to experimental inflammatory challenge associated with coping styles (bold, shy) in common carp (Cyprinus carpio). The central hypotheses of this thesis were that weight, age and coping style might affect the development and progression of this bacterial disease. This study investigated these three factors with experimental S. agalactiae infection in Nile tilapia.
    [Show full text]
  • Antimicrobial Sensitivity Pattern of Urine Isolates from Asymptomatic Bacteriuria During Pregnancy
    E:/Biomedica Vol.22 Jan. – Jun. 2006/Bio-9 (A) ANTIMICROBIAL SENSITIVITY PATTERN OF URINE ISOLATES FROM ASYMPTOMATIC BACTERIURIA DURING PREGNANCY 1AZIZ MARJAN KHATTAK, 2HABIB-ULLAH KHAN, 3IHSAN-ULLAH MASHUD 4BUSHRA ASHIQ AND 5SYED HUMAYUN SHAH Departments of 1,5 Pathology, 2,3 Medicine, Gomal Medical College, Dera Ismail Khan – Pakistan 4Departments of Microbiology, BMSI, JPMC, Karachi Screening women for asymptomatic bacteriuria (ASB) on the first antenatal visit is a part of standard obstetric care. Treating women with ASB decreases the chances of maternal and foetal complications. This study was conducted to find out the spectrum of urine pathogens and their drug susceptibility pattern for ASB during pregnancy. The study was conducted in the Basic Medical Sciences Institute, Jinnah Postgraduate Medical Centre Karachi, from September 2001 to March 2002. Two hundred and ninety women, apparently normal with confirmed pregnancy, were registered. A voided midstream urine specimen was collected and cultured. A significant growth i.e. ≥10 5 organisms/ml was identified with Analytical Profile Index 20 tests for identification of Enterobacteraceae (API-20-E) and for Gram positive cocci by other standard methods. The prevalence of ASB was found 6.2%. Antimicrobial sensitivity was determined by disc diffusion Kirby Bauyer method after matching the turbidity with 0.5 McFarland ,s standard. Most of the recommended drugs were found to have encouraging results, however, Escherichia coli showed 66.67% resistance to ampicillins and sulphonamides. Enterobacters showed 100% resistance to ampicillins, cephalosporins and nitrofurantoin. Staphylococcus saprophyticus showed 66.67% resistance to ampicillins and sulphonamides. It was concluded that detection of ASB during pregnancy and appropriate use of antimicrobials is only possible after culture of urine.
    [Show full text]
  • Practical Bacteriology Laboratory Manual
    Practical Bacteriology Laboratory Manual CLS 413 Prepared By: Deemah M. Al-Dabbagh Demonstrator, CLS Department King Saud University Practical Bacteriology CLS 413 Laboratory Safety General Safety Rules and Procedures 1. No food or drinks are permitted in the laboratory at any time. 2. Only closed-toe shoes are to be worn in the laboratory. Sandals are not permitted. 3. Keep hands and other objects away from your face, nose, eyes, ears, and mouth. The application of cosmetics in the laboratory is prohibited in the laboratory 4. Work areas/surfaces must be disinfected before and after use. 5. Laboratory coats must be worn and buttoned while in the laboratory. 6. Long hair should be secured behind your head. 7. Hands must be washed before leaving the laboratory. 8. All unnecessary books, purses, briefcases, etc., must be kept off the countertops. 9. Label all materials with your name, date, and any other applicable information (e.g., media, organism, etc.). 10. Dispose of wastes in their proper containers. 11. When handling chemicals, note the hazard code on the bottle and take the appropriate precautions indicated. 12. Do not pour chemicals down the sink. 13. Return all chemicals, reagents, cultures, and glassware to their appropriate places. 14. Flame (sterilize) transfer loops, wires, or needles before and immediately after use to transfer biological material. 15. Do not walk about the laboratory with transfer loops, wires, needles, or pipettes containing infectious material. 16. Turn off incinerators before leaving the laboratory. 17. Report any broken equipment. 18. If you are injured in the laboratory, immediately contact your course instructor or TA.
    [Show full text]
  • Medical Microbiology Manual
    LABORATORY EXERCISES to accompany MICROBIOLOGY LABORATORY BSL 214 Professor Susan C. Kavanaugh Bluegrass Community & Technical College 2010 INTRODUCTION TO CULTURING, MEDIA, AND ASEPTIC TECHNIQUES Even though you may be starting a career in a health-related field, you may be unaware of the number and variety of microorganisms (microbes) found everywhere in our environment, including the human body. In this laboratory you will learn new techniques and observations which relate to the concepts of microbiology and to your future health career. Most of the microorganisms that you will use in these laboratories are normal inhabitants of our environment. These microbes are called normal microbiota for the environment in which they normally reside. Health professionals need this knowledge in order to be able to distinguish normal flora from a possible infectious agent when interpreting microbiological reports. They also need to understand how normal flora can occasionally cause an infection when they invade a different area of the body, or when the patient's immune responses have been compromised. Microorganisms are found almost everywhere. In these first laboratory exercises you will be introduced to aseptic techniques, the procedures followed by microbiologists and healthcare workers to prevent contamination of cultures from outside sources and to prevent introduction of potentially disease-causing microbes (pathogens) into the human body. The methods for handling previously sterilized materials, for taking samples, for handling cultures, and for disposing contaminated materials are all designed to prevent the spread of microbes from one area to another. Pay close attention to the details in the written procedures and to the instructor's demonstrations to prevent contamination of your cultures, yourself, your environment, and the other people in your laboratory as well as prevention of infecting people outside of the laboratory, such as your friends and family.
    [Show full text]