The Structure, Arrangement and Intracellular Origin of Tubular Mastigonemes in Ochrqmonas Minute and Nonas Sp
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Freshwater Algae in Britain and Ireland - Bibliography
Freshwater algae in Britain and Ireland - Bibliography Floras, monographs, articles with records and environmental information, together with papers dealing with taxonomic/nomenclatural changes since 2003 (previous update of ‘Coded List’) as well as those helpful for identification purposes. Theses are listed only where available online and include unpublished information. Useful websites are listed at the end of the bibliography. Further links to relevant information (catalogues, websites, photocatalogues) can be found on the site managed by the British Phycological Society (http://www.brphycsoc.org/links.lasso). Abbas A, Godward MBE (1964) Cytology in relation to taxonomy in Chaetophorales. Journal of the Linnean Society, Botany 58: 499–597. Abbott J, Emsley F, Hick T, Stubbins J, Turner WB, West W (1886) Contributions to a fauna and flora of West Yorkshire: algae (exclusive of Diatomaceae). Transactions of the Leeds Naturalists' Club and Scientific Association 1: 69–78, pl.1. Acton E (1909) Coccomyxa subellipsoidea, a new member of the Palmellaceae. Annals of Botany 23: 537–573. Acton E (1916a) On the structure and origin of Cladophora-balls. New Phytologist 15: 1–10. Acton E (1916b) On a new penetrating alga. New Phytologist 15: 97–102. Acton E (1916c) Studies on the nuclear division in desmids. 1. Hyalotheca dissiliens (Smith) Bréb. Annals of Botany 30: 379–382. Adams J (1908) A synopsis of Irish algae, freshwater and marine. Proceedings of the Royal Irish Academy 27B: 11–60. Ahmadjian V (1967) A guide to the algae occurring as lichen symbionts: isolation, culture, cultural physiology and identification. Phycologia 6: 127–166 Allanson BR (1973) The fine structure of the periphyton of Chara sp. -
The Revised Classification of Eukaryotes
Published in Journal of Eukaryotic Microbiology 59, issue 5, 429-514, 2012 which should be used for any reference to this work 1 The Revised Classification of Eukaryotes SINA M. ADL,a,b ALASTAIR G. B. SIMPSON,b CHRISTOPHER E. LANE,c JULIUS LUKESˇ,d DAVID BASS,e SAMUEL S. BOWSER,f MATTHEW W. BROWN,g FABIEN BURKI,h MICAH DUNTHORN,i VLADIMIR HAMPL,j AARON HEISS,b MONA HOPPENRATH,k ENRIQUE LARA,l LINE LE GALL,m DENIS H. LYNN,n,1 HILARY MCMANUS,o EDWARD A. D. MITCHELL,l SHARON E. MOZLEY-STANRIDGE,p LAURA W. PARFREY,q JAN PAWLOWSKI,r SONJA RUECKERT,s LAURA SHADWICK,t CONRAD L. SCHOCH,u ALEXEY SMIRNOVv and FREDERICK W. SPIEGELt aDepartment of Soil Science, University of Saskatchewan, Saskatoon, SK, S7N 5A8, Canada, and bDepartment of Biology, Dalhousie University, Halifax, NS, B3H 4R2, Canada, and cDepartment of Biological Sciences, University of Rhode Island, Kingston, Rhode Island, 02881, USA, and dBiology Center and Faculty of Sciences, Institute of Parasitology, University of South Bohemia, Cˇeske´ Budeˇjovice, Czech Republic, and eZoology Department, Natural History Museum, London, SW7 5BD, United Kingdom, and fWadsworth Center, New York State Department of Health, Albany, New York, 12201, USA, and gDepartment of Biochemistry, Dalhousie University, Halifax, NS, B3H 4R2, Canada, and hDepartment of Botany, University of British Columbia, Vancouver, BC, V6T 1Z4, Canada, and iDepartment of Ecology, University of Kaiserslautern, 67663, Kaiserslautern, Germany, and jDepartment of Parasitology, Charles University, Prague, 128 43, Praha 2, Czech -
Adl S.M., Simpson A.G.B., Lane C.E., Lukeš J., Bass D., Bowser S.S
The Journal of Published by the International Society of Eukaryotic Microbiology Protistologists J. Eukaryot. Microbiol., 59(5), 2012 pp. 429–493 © 2012 The Author(s) Journal of Eukaryotic Microbiology © 2012 International Society of Protistologists DOI: 10.1111/j.1550-7408.2012.00644.x The Revised Classification of Eukaryotes SINA M. ADL,a,b ALASTAIR G. B. SIMPSON,b CHRISTOPHER E. LANE,c JULIUS LUKESˇ,d DAVID BASS,e SAMUEL S. BOWSER,f MATTHEW W. BROWN,g FABIEN BURKI,h MICAH DUNTHORN,i VLADIMIR HAMPL,j AARON HEISS,b MONA HOPPENRATH,k ENRIQUE LARA,l LINE LE GALL,m DENIS H. LYNN,n,1 HILARY MCMANUS,o EDWARD A. D. MITCHELL,l SHARON E. MOZLEY-STANRIDGE,p LAURA W. PARFREY,q JAN PAWLOWSKI,r SONJA RUECKERT,s LAURA SHADWICK,t CONRAD L. SCHOCH,u ALEXEY SMIRNOVv and FREDERICK W. SPIEGELt aDepartment of Soil Science, University of Saskatchewan, Saskatoon, SK, S7N 5A8, Canada, and bDepartment of Biology, Dalhousie University, Halifax, NS, B3H 4R2, Canada, and cDepartment of Biological Sciences, University of Rhode Island, Kingston, Rhode Island, 02881, USA, and dBiology Center and Faculty of Sciences, Institute of Parasitology, University of South Bohemia, Cˇeske´ Budeˇjovice, Czech Republic, and eZoology Department, Natural History Museum, London, SW7 5BD, United Kingdom, and fWadsworth Center, New York State Department of Health, Albany, New York, 12201, USA, and gDepartment of Biochemistry, Dalhousie University, Halifax, NS, B3H 4R2, Canada, and hDepartment of Botany, University of British Columbia, Vancouver, BC, V6T 1Z4, Canada, and iDepartment -
The Ecology of Phytoplankton
This page intentionally left blank Ecology of Phytoplankton Phytoplankton communities dominate the pelagic Board and as a tutor with the Field Studies Coun- ecosystems that cover 70% of the world’s surface cil. In 1970, he joined the staff at the Windermere area. In this marvellous new book Colin Reynolds Laboratory of the Freshwater Biological Association. deals with the adaptations, physiology and popula- He studied the phytoplankton of eutrophic meres, tion dynamics of the phytoplankton communities then on the renowned ‘Lund Tubes’, the large lim- of lakes and rivers, of seas and the great oceans. netic enclosures in Blelham Tarn, before turning his The book will serve both as a text and a major attention to the phytoplankton of rivers. During the work of reference, providing basic information on 1990s, working with Dr Tony Irish and, later, also Dr composition, morphology and physiology of the Alex Elliott, he helped to develop a family of models main phyletic groups represented in marine and based on, the dynamic responses of phytoplankton freshwater systems. In addition Reynolds reviews populations that are now widely used by managers. recent advances in community ecology, developing He has published two books, edited a dozen others an appreciation of assembly processes, coexistence and has published over 220 scientific papers as and competition, disturbance and diversity. Aimed well as about 150 reports for clients. He has primarily at students of the plankton, it develops given advanced courses in UK, Germany, Argentina, many concepts relevant to ecology in the widest Australia and Uruguay. He was the winner of the sense, and as such will appeal to a wide readership 1994 Limnetic Ecology Prize; he was awarded a cov- among students of ecology, limnology and oceanog- eted Naumann–Thienemann Medal of SIL and was raphy. -
STUDIES on the LIFE CYCLE of AKINETE FORMING CYANOBACTERIUM Cylindrospermopsis Raciborskii in the TEMPERATE REGION
PhD Thesis STUDIES ON THE LIFE CYCLE OF AKINETE FORMING CYANOBACTERIUM Cylindrospermopsis raciborskii IN THE TEMPERATE REGION A thesis approved by the Faculty of Environmental Sciences and Process Engineering at the Brandenburg University of Technology in Cottbus in partial fulfilment of the requirement for the award of the academic degree of PhD in Environmental and Resource management By Master of Science Emilienne Ingie Tingwey From: Douala-Wouri, Cameroon Supervisor: Prof . Dr. rer. nat. habil. Brigitte Nixdorf Supervisor: Prof . Thomas Raab Day of the oral examination: 20 th April 2009 In loving memory of my father Peter Fon Tingwey (10.12.1939-07.10.2001) ACKNOWLEDGEMENTS I would first like to acknowledge and immensely thank IPSWAT-International Postgraduate Studies in Water Technologies for materially and financially sponsoring my studies through out these three years period. To my supervisors special thanks, Professor Dr. rer. nat. Brigitte Nixdorf and Dr Jacqueline Rücker you gave me an opportunity to do this research in which I am really interested, and make this thesis possible in the Department of Fresh Water Conservation at the Brandenburg University of Technology, Cottbus. I sincerely can not help expressing how I should credit this thesis to their support and guidance whenever I dropped in their offices or sent an email, their encouragement and stimulation throughout the duration of my writing up. I am also very grateful to Ingo Henschke of the Chair of fresh water conservation, Bad Saarow for his enormous help with sampling collection and field experiments. In addition many thanks to Anette Tworeck of LBH, Freiburg for generating some of the data and Andrea Laundart who helped run the culture experiments. -
Revisions to the Classification, Nomenclature, and Diversity of Eukaryotes
PROF. SINA ADL (Orcid ID : 0000-0001-6324-6065) PROF. DAVID BASS (Orcid ID : 0000-0002-9883-7823) DR. CÉDRIC BERNEY (Orcid ID : 0000-0001-8689-9907) DR. PACO CÁRDENAS (Orcid ID : 0000-0003-4045-6718) DR. IVAN CEPICKA (Orcid ID : 0000-0002-4322-0754) DR. MICAH DUNTHORN (Orcid ID : 0000-0003-1376-4109) PROF. BENTE EDVARDSEN (Orcid ID : 0000-0002-6806-4807) DR. DENIS H. LYNN (Orcid ID : 0000-0002-1554-7792) DR. EDWARD A.D MITCHELL (Orcid ID : 0000-0003-0358-506X) PROF. JONG SOO PARK (Orcid ID : 0000-0001-6253-5199) DR. GUIFRÉ TORRUELLA (Orcid ID : 0000-0002-6534-4758) Article DR. VASILY V. ZLATOGURSKY (Orcid ID : 0000-0002-2688-3900) Article type : Original Article Corresponding author mail id: [email protected] Adl et al.---Classification of Eukaryotes Revisions to the Classification, Nomenclature, and Diversity of Eukaryotes Sina M. Adla, David Bassb,c, Christopher E. Laned, Julius Lukeše,f, Conrad L. Schochg, Alexey Smirnovh, Sabine Agathai, Cedric Berneyj, Matthew W. Brownk,l, Fabien Burkim, Paco Cárdenasn, Ivan Čepičkao, Ludmila Chistyakovap, Javier del Campoq, Micah Dunthornr,s, Bente Edvardsent, Yana Eglitu, Laure Guillouv, Vladimír Hamplw, Aaron A. Heissx, Mona Hoppenrathy, Timothy Y. Jamesz, Sergey Karpovh, Eunsoo Kimx, Martin Koliskoe, Alexander Kudryavtsevh,aa, Daniel J. G. Lahrab, Enrique Laraac,ad, Line Le Gallae, Denis H. Lynnaf,ag, David G. Mannah, Ramon Massana i Moleraq, Edward A. D. Mitchellac,ai , Christine Morrowaj, Jong Soo Parkak, Jan W. Pawlowskial, Martha J. Powellam, Daniel J. Richteran, Sonja Rueckertao, Lora Shadwickap, Satoshi Shimanoaq, Frederick W. Spiegelap, Guifré Torruella i Cortesar, Noha Youssefas, Vasily Zlatogurskyh,at, Qianqian Zhangau,av. -
Heterokontophyta (Ochrophyta)
• Ochrophytes are algae of diverse organization and include unicellular, colonial, filamentous and parenchematous thalli. • They are characterized by the presence of chlorophylls a and c in their plastids as well as xanthophylls (e.g. fucoxanthin) and other carotenoids that mask the chlorophylls (Table 2). • Due to the presence of these pigments, many ochrophytes have a yellowish-green, gold or brown appearance. • As storage products, they accumulate oils and Heterokontophyta chrysolaminarin (C) in cytoplasmic vesicles, but never starch. (Ochrophyta) • Cell walls contain cellulose, and in certain species they contain silica. • Cells possess one or more plastids, each with an envelope formed by two membranes of chloroplast and two membranes of chloroplast endoplasmic reticulum. • Thylacoids, in stacks of three, in most ochrophytes are Fig. Semidiagrammatic drawing of a light surrounded by a band of thylakoids, girdle lamella, just and electron microscopical view of the basic organization of a cell of the beneath the innermost plastid membrane. Chrysophyceae. (C) Chrysolaminarin • Ochrophytes have heterokont flagellated cells with two vesicle; (CE) chloroplast envelope; different flagella, an anterior tinsel (mastigonemes) and (CER) chloroplast endoplasmic reticulum; (CV) contractile vacuole; (E) posterior whiplash (smooth) flagellum (Fig. ). eyespot; (FS) flagellar swelling; (G) Golgi • In this group of algae, mastigonemes consist of three body; (H) hair of the anterior flagellum; parts, a basal, tubular and apical part formed by fibrils. (MB) muciferous body; (MR) microtubular root of flagellum; (N) nucleus. Chrysophyceae and related groups The following classes are commonly recognized in this division and will be discussed here: • Chrysophyceans (Golden-brown algae) are mostly unicellular 1. Chrysophyceae (golden-brown algae) flagellate organisms. -
Taxonomy and Phylogeny of Heliozoa. III. Actinophryids
Acta Protozool. (2001) 40: 3 - 25 Taxonomy and Phylogeny of Heliozoa. III. Actinophryids Kirill A. MIKRJUKOV1 and David J. PATTERSON2 1Department of Zoology and Comparative Anatomy of Invertebrates of Moscow State University, Moscow, Russia; 2School of Biological Sciences, University of Sydney, Sydney, Australia Summary. The diversity, relationships and classification of the actinophryid heliozoa (protists) are reviewed. Descriptions of two new species (Actinophrys salsuginosa and Ciliophrys azurina) are presented. The actinophryid heliozoa are revised to include six species: Actinophrys sol (Müller, 1773) Ehrenberg, 1830, A. pontica Valkanov, 1940, A. tauryanini Mikrjukov et Patterson, 2000, A. salsuginosa sp. n., Actinosphaerium eichhornii (Ehrenberg, 1840) Stein, 1857, and A. nucleofilum Barrett, 1958. Echinosphoerium /Echinosphaerium Hovasse, 1965 and Camptonema Schaudinn, 1894 are regarded as junior subjective synonyms of Actinosphaerium Stein, 1857. The relatedness between actinophryid heliozoa and pedinellid helioflagellates is discussed. The new species, Ciliophrys azurina, exhibiting characters (tapering axonemes and peripheral location of heterochromatin) previously only reported in the actinophryids. This allows a proposition for the sequence of character acquisition and a new group of stramenopiles - the actinodines - uniting pedinellids, ciliophryids and actinophryids. Key words: actinodines, Actinophryida, Actinophrys salsuginosa sp. n., Actinophrys tauryanini nom. nov., Actinosphaerium, Camptonema, Ciliophrys azurina sp. -
Ja Iitf 2005 Adl001.Pdf
J. Eukaryot. Microbiol., 52(5), 2005 pp. 399–451 r 2005 by the International Society of Protistologists DOI: 10.1111/j.1550-7408.2005.00053.x The New Higher Level Classification of Eukaryotes with Emphasis on the Taxonomy of Protists SINA M. ADL,a ALASTAIR G. B. SIMPSON,a MARK A. FARMER,b ROBERT A. ANDERSEN,c O. ROGER ANDERSON,d JOHN R. BARTA,e SAMUEL S. BOWSER,f GUY BRUGEROLLE,g ROBERT A. FENSOME,h SUZANNE FREDERICQ,i TIMOTHY Y. JAMES,j SERGEI KARPOV,k PAUL KUGRENS,1 JOHN KRUG,m CHRISTOPHER E. LANE,n LOUISE A. LEWIS,o JEAN LODGE,p DENIS H. LYNN,q DAVID G. MANN,r RICHARD M. MCCOURT,s LEONEL MENDOZA,t ØJVIND MOESTRUP,u SHARON E. MOZLEY-STANDRIDGE,v THOMAS A. NERAD,w CAROL A. SHEARER,x ALEXEY V. SMIRNOV,y FREDERICK W. SPIEGELz and MAX F. J. R. TAYLORaa aDepartment of Biology, Dalhousie University, Halifax, NS B3H 4J1, Canada, and bCenter for Ultrastructural Research, Department of Cellular Biology, University of Georgia, Athens, Georgia 30602, USA, and cBigelow Laboratory for Ocean Sciences, West Boothbay Harbor, ME 04575, USA, and dLamont-Dogherty Earth Observatory, Palisades, New York 10964, USA, and eDepartment of Pathobiology, Ontario Veterinary College, University of Guelph, Guelph, ON N1G 2W1, Canada, and fWadsworth Center, New York State Department of Health, Albany, New York 12201, USA, and gBiologie des Protistes, Universite´ Blaise Pascal de Clermont-Ferrand, F63177 Aubiere cedex, France, and hNatural Resources Canada, Geological Survey of Canada (Atlantic), Bedford Institute of Oceanography, PO Box 1006 Dartmouth, NS B2Y 4A2, Canada, and iDepartment of Biology, University of Louisiana at Lafayette, Lafayette, Louisiana 70504, USA, and jDepartment of Biology, Duke University, Durham, North Carolina 27708-0338, USA, and kBiological Faculty, Herzen State Pedagogical University of Russia, St. -
Anders-Wold---Master-Thesis.Pdf (11.66Mb)
Cultured microalgae from shallow water and intertidal soft sediments in the Red Sea, Saudi Arabia Anders Wold Master of Science Thesis Department of Biosciences Section for Aquatic Biology and Toxicology (AQUA) UNIVERSITY OF OSLO 18.06.2015 © Anders Wold Year: 2015 Title: Cultured microalgae from shallow water and intertidal soft sediments in the Red Sea, Saudi Arabia Author: Anders Wold http://www.duo.uio.no Printed: Reprosentralen, University of Oslo II Abstract The tropical Red Sea coast of Saudi Arabia is dominated by intertidal soft sediments, seagrass meadows and mangrove beaches. These habitats have been under high pressure for decades partly due to anthropogenic activity. The water of the Red Sea is characterised by its high temperature and salinity throughout the year. The microalgae is a group of organisms characterised by their small size, unicellular or colonial organisation and ability or secondarily lost ability to photosynthesise including closely related non-photosynthetic species. The photoautotrophic microalgae are responsible for approximately 45% of the World's primary production and thus play a major role in many ecosystems. It is estimated that more than 40,000 algal species (including macroalgae) have been described, but recent advances in high throughput sequencing suggest there is a vast unknown diversity yet to be discovered. Little is known about the microalgal species diversity associated with the tropical habitats of the west coast of Saudi Arabia. Eleven strains were isolated in the shallow waters and beaches of Saudi Arabia. They were studied morphologically with light microscopy, scanning electron microscopy and transmission electron microscopy and molecularly with phylogenetic trees inferred from 18S and partial 28S (D1/D2) rDNA. -
Presence, Abundance and Bacterivory of the Mixotrophic Algae Pseudopedinella (Dictyochophyceae) in Freshwater Environments
Vol. 76: 219–232, 2016 AQUATIC MICROBIAL ECOLOGY Published online February 22 doi: 10.3354/ame01780 Aquat Microb Ecol OPENPEN ACCESSCCESS Presence, abundance and bacterivory of the mixotrophic algae Pseudopedinella (Dictyochophyceae) in freshwater environments Marina Gerea1,*, Juan F. Saad2, Irina Izaguirre2, Claudia Queimaliños1, Josep M. Gasol3, Fernando Unrein4 1Laboratorio de Fotobiología, INIBIOMA, CONICET-Universidad Nacional del Comahue, Quintral 1250, (R8400FRD) Bariloche, Argentina 2Departamento de Ecología, Genética y Evolución, IEGEBA, UBA-CONICET, Ciudad Universitaria, (C1428EHA) Buenos Aires, Argentina 3Institut de Ciències del Mar, CSIC, Passeig Marítim de la Barceloneta, 37−49. 08003 Barcelona, Catalonia, Spain 4Laboratorio de Ecología y Fotobiología Acuática, IIB-INTECH, UNSAM-CONICET, Av. Intendente Marino km 8,200, (B7130IWA) Chascomús, Argentina ABSTRACT: The genus Pseudopedinella has been described as mixotrophic; however, ecological information about this algal stramenopile (Heterokonta) is unclear. We investigate the environ- mental conditions that determine the presence, abundance and bacterivory rates of this genus in freshwater systems. To this end we analyzed 54 water bodies with different limnological features distributed along a latitudinal and trophic gradient in northern Patagonia (Argentina) and the Antarctic Peninsula. In addition, 14 grazing experiments were carried out in order to estimate in- gestion rates and impact on the bacterioplankton. Our results indicate that this genus is exclu- sively found in oligotrophic environments, and that it develops well in a wide range of tempera- tures. Average cell-specific grazing rate was 2.83 bacteria cell–1 h–1, with a maximum value of 6.74 bacteria ml–1 h–1. Interestingly, grazing increased with prey abundance and decreased with in- creasing nutrient availability. -
7.5 X 11.5.Doubleline.P65
Cambridge University Press 0521605199 - The Ecology of Phytoplankton C. S. Reynolds Excerpt More information Chapter 1 Phytoplankton and are not necessarily contested. Thus, ‘plank- 1.1 Definitions and terminology ton’ excludes other suspensoids that are either non-living, such as clay particles and precipitated The correct place to begin any exposition of a chemicals, or are fragments or cadavers derived major component in biospheric functioning is from biogenic sources. Despite the existence of with precise definitions and crisp discrimination. the now largely redundant subdivision tychoplank- This should be a relatively simple exercise but for ton (see Box 1.1), ‘plankton’ normally comprises the need to satisfy a consensus of understand- those living organisms that are only fortuitously ing and usage. Particularly among the biological and temporarily present, imported from adjacent sciences, scientific knowledge is evolving rapidly habitats but which neither grew in this habitat and, as it does so, it often modifies and outgrows nor are suitably adapted to survive in the truly the constraints of the previously acceptable ter- open water, ostensibly independent of shore and minology. I recognised this problem for plank- bottom. Such locations support distinct suites of ton science in an earlier monograph (Reynolds, surface-adhering organisms with their own dis- 1984a). Since then, the difficulty has worsened tinctive survival adaptations. and it impinges on many sections of the present ‘Suspension’ has been more problematic, hav- book. The best means of dealing with it is to ing quite rigid physical qualifications of dens- accept the issue as a symptom of the good health ity and movement relative to water.