Trait Lability and Evolutionary Innovation
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Chinese Tallow Invasion in Maritime Forests: Understand Invasion Mechanism and Develop Ecologically-Based Management Lauren Susan Pile Clemson University
Clemson University TigerPrints All Dissertations Dissertations 12-2015 Chinese Tallow Invasion in Maritime Forests: Understand Invasion Mechanism and Develop Ecologically-Based Management Lauren Susan Pile Clemson University Follow this and additional works at: https://tigerprints.clemson.edu/all_dissertations Part of the Forest Sciences Commons Recommended Citation Pile, Lauren Susan, "Chinese Tallow Invasion in Maritime Forests: Understand Invasion Mechanism and Develop Ecologically-Based Management" (2015). All Dissertations. 1807. https://tigerprints.clemson.edu/all_dissertations/1807 This Dissertation is brought to you for free and open access by the Dissertations at TigerPrints. It has been accepted for inclusion in All Dissertations by an authorized administrator of TigerPrints. For more information, please contact [email protected]. CHINESE TALLOW INVASION IN MARITIME FORESTS: UNDERSTAND INVASION MECHANISM AND DEVELOP ECOLOGICALLY-BASED MANAGEMENT A Dissertation Presented to the Graduate School of Clemson University In Partial Fulfillment of the Requirements for the Degree Doctor of Philosophy Forest Resources by Lauren Susan Pile December 2015 Accepted by: G. Geoff Wang, Committee Chair William C. Bridges Jr. Patricia A. Layton Thomas A. Waldrop Joan L. Walker ABSTRACT Invasion by highly aggressive, non-native, invasive plants is a significant threat to management and conservation priorities as these plants can transform ecosystem functions and processes. In this study, I investigated the non-native, invasive tree, Chinese tallow -
South American Cacti in Time and Space: Studies on the Diversification of the Tribe Cereeae, with Particular Focus on Subtribe Trichocereinae (Cactaceae)
Zurich Open Repository and Archive University of Zurich Main Library Strickhofstrasse 39 CH-8057 Zurich www.zora.uzh.ch Year: 2013 South American Cacti in time and space: studies on the diversification of the tribe Cereeae, with particular focus on subtribe Trichocereinae (Cactaceae) Lendel, Anita Posted at the Zurich Open Repository and Archive, University of Zurich ZORA URL: https://doi.org/10.5167/uzh-93287 Dissertation Published Version Originally published at: Lendel, Anita. South American Cacti in time and space: studies on the diversification of the tribe Cereeae, with particular focus on subtribe Trichocereinae (Cactaceae). 2013, University of Zurich, Faculty of Science. South American Cacti in Time and Space: Studies on the Diversification of the Tribe Cereeae, with Particular Focus on Subtribe Trichocereinae (Cactaceae) _________________________________________________________________________________ Dissertation zur Erlangung der naturwissenschaftlichen Doktorwürde (Dr.sc.nat.) vorgelegt der Mathematisch-naturwissenschaftlichen Fakultät der Universität Zürich von Anita Lendel aus Kroatien Promotionskomitee: Prof. Dr. H. Peter Linder (Vorsitz) PD. Dr. Reto Nyffeler Prof. Dr. Elena Conti Zürich, 2013 Table of Contents Acknowledgments 1 Introduction 3 Chapter 1. Phylogenetics and taxonomy of the tribe Cereeae s.l., with particular focus 15 on the subtribe Trichocereinae (Cactaceae – Cactoideae) Chapter 2. Floral evolution in the South American tribe Cereeae s.l. (Cactaceae: 53 Cactoideae): Pollination syndromes in a comparative phylogenetic context Chapter 3. Contemporaneous and recent radiations of the world’s major succulent 86 plant lineages Chapter 4. Tackling the molecular dating paradox: underestimated pitfalls and best 121 strategies when fossils are scarce Outlook and Future Research 207 Curriculum Vitae 209 Summary 211 Zusammenfassung 213 Acknowledgments I really believe that no one can go through the process of doing a PhD and come out without being changed at a very profound level. -
Snail and Slug Dissection Tutorial: Many Terrestrial Gastropods Cannot Be
IDENTIFICATION OF AGRICULTURALLY IMPORTANT MOLLUSCS TO THE U.S. AND OBSERVATIONS ON SELECT FLORIDA SPECIES By JODI WHITE-MCLEAN A DISSERTATION PRESENTED TO THE GRADUATE SCHOOL OF THE UNIVERSITY OF FLORIDA IN PARTIAL FULFILLMENT OF THE REQUIREMENTS FOR THE DEGREE OF DOCTOR OF PHILOSOPHY UNIVERSITY OF FLORIDA 2012 1 © 2012 Jodi White-McLean 2 To my wonderful husband Steve whose love and support helped me to complete this work. I also dedicate this work to my beautiful daughter Sidni who remains the sunshine in my life. 3 ACKNOWLEDGMENTS I would like to express my sincere gratitude to my committee chairman, Dr. John Capinera for his endless support and guidance. His invaluable effort to encourage critical thinking is greatly appreciated. I would also like to thank my supervisory committee (Dr. Amanda Hodges, Dr. Catharine Mannion, Dr. Gustav Paulay and John Slapcinsky) for their guidance in completing this work. I would like to thank Terrence Walters, Matthew Trice and Amanda Redford form the United States Department of Agriculture - Animal and Plant Health Inspection Service - Plant Protection and Quarantine (USDA-APHIS-PPQ) for providing me with financial and technical assistance. This degree would not have been possible without their help. I also would like to thank John Slapcinsky and the staff as the Florida Museum of Natural History for making their collections and services available and accessible. I also would like to thank Dr. Jennifer Gillett-Kaufman for her assistance in the collection of the fungi used in this dissertation. I am truly grateful for the time that both Dr. Gillett-Kaufman and Dr. -
From Cacti to Carnivores: Improved Phylotranscriptomic Sampling And
Article Type: Special Issue Article RESEARCH ARTICLE INVITED SPECIAL ARTICLE For the Special Issue: Using and Navigating the Plant Tree of Life Short Title: Walker et al.—Phylotranscriptomic analysis of Caryophyllales From cacti to carnivores: Improved phylotranscriptomic sampling and hierarchical homology inference provide further insight into the evolution of Caryophyllales Joseph F. Walker1,13, Ya Yang2, Tao Feng3, Alfonso Timoneda3, Jessica Mikenas4,5, Vera Hutchison4, Caroline Edwards4, Ning Wang1, Sonia Ahluwalia1, Julia Olivieri4,6, Nathanael Walker-Hale7, Lucas C. Majure8, Raúl Puente8, Gudrun Kadereit9,10, Maximilian Lauterbach9,10, Urs Eggli11, Hilda Flores-Olvera12, Helga Ochoterena12, Samuel F. Brockington3, Michael J. Moore,4 and Stephen A. Smith1,13 Manuscript received 13 October 2017; revision accepted 4 January 2018. 1 Department of Ecology & Evolutionary Biology, University of Michigan, 830 North University Avenue, Ann Arbor, MI 48109-1048 USA 2 Department of Plant and Microbial Biology, University of Minnesota-Twin Cities, 1445 Gortner Avenue, St. Paul, MN 55108 USA 3 Department of Plant Sciences, University of Cambridge, Cambridge CB2 3EA, UK 4 Department of Biology, Oberlin College, Science Center K111, 119 Woodland Street, Oberlin, OH 44074-1097 USA 5 Current address: USGS Canyonlands Research Station, Southwest Biological Science Center, 2290 S West Resource Blvd, Moab, UT 84532 USA 6 Institute of Computational and Mathematical Engineering (ICME), Stanford University, 475 Author Manuscript Via Ortega, Suite B060, Stanford, CA, 94305-4042 USA This is the author manuscript accepted for publication and has undergone full peer review but has not been through the copyediting, typesetting, pagination and proofreading process, which may lead to differences between this version and the Version of Record. -
Plants of Retention Ponds and Drainage Ditches
Plants of Retention Ponds and Drainage Ditches The Greater Daytona Beach Area Bethune-Cookman University Daytona Beach, FL AUTHORS, EDITORS, and CONTRIBUTORS Editor in Chief, Author, Photographer, Illustrator Hyun Jung Cho Authors and Editors Don Spence Raymond Jarrett B-CU Student Assistant Indira Prajapati Justin Dahl Copyright © 2015 by Hyun Jung Cho All rights reserved, including the right to reproduce this book in any form. Page I Plants of Retention Ponds and Drainage Ditches Plants of Retention Ponds and Drainage Ditches The Greater Daytona Beach Area ACKNOWLEDGMENTS Field Assistants: Joseph White, Ali Simpson, Jared Zurbruegg, Christopher Schlageter Plant ID Assistant: Daniel J. Young Maps: Ali Simpson All participants of the International speedway Survey Day event on Oct 5, 2013 Donation: Some members of the Paw Paw Chapter of Florida Native Plant Society The project was supported in part by funding from: Bethune-Cookman University Florida Exotic Pest Plant Council The views expressed herein do not necessarily reflect the views of any of the above organizations. Plants of Retention Ponds and Drainage Ditches Page II BIOSKETCHES OF AUTHORS and CONTRIBUTORS J. Cho is Professor of Integrated Environmental Sci- ence at Bethune-Cookman University. She is easily amazed by plants growing in ditches and loves her cat. She has Ph.D. in Conservation Biology and M.S. in Biology from the University of New Orleans, NOLA and B.S. in Biology from the Sung-shin Women’s Uni- versity, Seoul, Korea. Don Spence is a native of Daytona Beach and has lived in Central Florida most of his life. After high school he joined the U.S. -
Improved Transcriptome Sampling Pinpoints 26 Ancient and More Recent Polyploidy Events in Caryophyllales, Including Two Allopolyploidy Events
Article type : MS - Regular Manuscript Improved transcriptome sampling pinpoints 26 ancient and more recent polyploidy events in Caryophyllales, including two allopolyploidy events Ya Yang 1,4, Michael J. Moore2, Samuel F. Brockington3, Jessica Mikenas2, Julia Olivieri2, Joseph F. Walker1 and Stephen A. Smith1 1Department of Ecology & Evolutionary Biology, University of Michigan, 830 North University Avenue, Ann Arbor, MI 48109-1048, USA; 2Department of Biology, Oberlin College, 119 Woodland St, Oberlin, OH 44074-1097, USA; 3Department of Plant Sciences, University of Cambridge, Cambridge, CB2 3EA, UK; 4Current address: Department of Plant and Microbial Biology, University of Minnesota, Twin Cities. 1445 Gortner Avenue, St Paul, MN 55108, USA Authors for correspondence: Ya Yang Tel: +1 612 625 6292 Email: [email protected] Stephen A. Smith Tel: +1 734 764 7923 Email: [email protected] Received: 30 May 2017 Accepted: 9 AugustAuthor Manuscript 2017 This is the author manuscript accepted for publication and has undergone full peer review but has not been through the copyediting, typesetting, pagination and proofreading process, which may lead to differences between this version and the Version of Record. Please cite this article as doi: 10.1111/nph.14812 This article is protected by copyright. All rights reserved Summary • Studies of the macroevolutionary legacy of polyploidy are limited by an incomplete sampling of these events across the tree of life. To better locate and understand these events, we need comprehensive taxonomic sampling as well as homology inference methods that accurately reconstruct the frequency and location of gene duplications. • We assembled a dataset of transcriptomes and genomes from 169 species in Caryophyllales, of which 43 were newly generated for this study, representing one of the densest sampled genomic-scale datasets available. -
A Vascular Plant Inventory of Jay B. Starkey Wilderness Park, Pasco County, Florida Emily Ferguson University of South Florida
University of South Florida Scholar Commons Graduate Theses and Dissertations Graduate School 10-29-2004 A Vascular Plant Inventory of Jay B. Starkey Wilderness Park, Pasco County, Florida Emily Ferguson University of South Florida Follow this and additional works at: https://scholarcommons.usf.edu/etd Part of the American Studies Commons Scholar Commons Citation Ferguson, Emily, "A Vascular Plant Inventory of Jay B. Starkey Wilderness Park, Pasco County, Florida" (2004). Graduate Theses and Dissertations. https://scholarcommons.usf.edu/etd/1030 This Thesis is brought to you for free and open access by the Graduate School at Scholar Commons. It has been accepted for inclusion in Graduate Theses and Dissertations by an authorized administrator of Scholar Commons. For more information, please contact [email protected]. A Vascular Plant Inventory of Jay B. Starkey Wilderness Park, Pasco County, Florida by Emily Ferguson A thesis submitted in partial fulfillment of the requirements for the degree of Master of Science Department of Biology College of Arts and Science University of South Florida Major Professor: Richard Wunderlin, Ph.D. Clinton Dawes, Ph. D. Frederick Essig, Ph.D. Date of Approval: October 29 (Friday), 2004 Keywords: floristic inventory, Jay B. Starkey Wilderness Park, natural communities © Copyright 2004, Emily Ferguson Table of Contents List of Tables ..................................................................................................................... iii List of Figures................................................................................................................... -
Redalyc.Flora En Playas Y Dunas Costeras De México
Acta Botánica Mexicana ISSN: 0187-7151 [email protected] Instituto de Ecología, A.C. México Espejel, Ileana; Jiménez-Orocio, Oscar; Castillo-Campos, Gonzalo; Garcillán, Pedro P.; Álvarez, Lucero; Castillo-Argüero, Silvia; Durán, Rafael; Ferrer, Merari; Infante-Mata, Dulce; Iriarte, Silvia; León de la Luz, José Luis; López-Rosas, Hugo; Medel Narváez, Alfonso; Monroy, Roberto; Moreno-Casasola, Patricia; Rebman, Jon P.; Rodríguez- Revelo, Natalia; Sánchez-Escalante, Jesús; Vanderplank, Sula Flora en playas y dunas costeras de México Acta Botánica Mexicana, núm. 121, octubre, 2017, pp. 39-81 Instituto de Ecología, A.C. Pátzcuaro, México Disponible en: http://www.redalyc.org/articulo.oa?id=57453196002 Cómo citar el artículo Número completo Sistema de Información Científica Más información del artículo Red de Revistas Científicas de América Latina, el Caribe, España y Portugal Página de la revista en redalyc.org Proyecto académico sin fines de lucro, desarrollado bajo la iniciativa de acceso abierto 121: 39-81 Octubre 2017 Artículo de investigación Flora en playas y dunas costeras de México Flora on beaches and coastal sand dunes of Mexico Ileana Espejel1,11 , Oscar Jiménez-Orocio1 , Gonzalo Castillo-Campos2 , Pedro P. Garcillán3 , Lucero Álvarez1 , Silvia Castillo-Argüero4 , Rafael Durán5 , Merari Ferrer5 , Dulce Infante-Mata6 , Silvia Iriarte4 , José Luis León de la Luz3 , Hugo López-Rosas7, 7a , Alfonso Medel Narváez3 , Roberto Monroy3 , Patricia Moreno-Casasola2 , Jon P. Rebman8 , Natalia Rodríguez-Revelo1 , Jesús Sánchez-Escalante9 , Sula Vanderplank10 1 Universidad Autónoma de Baja Califor- nia, Facultad de Ciencias, Apdo. postal RESUMEN: 1880, Ensenada, B. C., México. Antecedentes y Objetivos: Se presenta el primer listado florístico de las playas y dunas costeras de Méxi- 2 Instituto de Ecología, A.C., Carretera anti- gua a Coatepec 351, El Haya, 91070 Xa- co, actualizado y respaldado por ejemplares de herbario. -
Evolution of Portulacineae Marked by Gene Tree Conflict and Gene Family
bioRxiv preprint doi: https://doi.org/10.1101/294546; this version posted August 13, 2018. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 1 2 Evolution of Portulacineae marked by gene tree conflict and gene family expansion 3 associated with adaptation to harsh environments 4 5 Ning Wang1, Ya Yang2, Michael J. Moore3, Samuel F. Brockington4, Joseph F. Walker1, 6 Joseph W Brown5, Bin Liang1, Tao Feng4, Caroline Edwards3, Jessica Mikenas3, Julia Olivieri3, Vera 7 Hutchison3, Alfonso Timoneda4, Tommy Stoughton6, Raúl Puente7, Lucas C. Majure7,8, Urs Eggli9, 8 and Stephen A. Smith1 9 10 1Department of Ecology & Evolutionary Biology, University of Michigan, 830 North University Avenue, Ann 11 Arbor, MI 48109-1048, USA 12 2Department of Plant and Microbial Biology, University of Minnesota-Twin Cities. 1445 Gortner Avenue, St. 13 Paul, MN 55108 USA 14 3Department of Biology, Oberlin College, Science Center K111, 119 Woodland St., Oberlin, Ohio 44074 USA 15 4Department of Plant Sciences, University of Cambridge, Cambridge CB2 3EA, United Kingdom 16 5Department of Animal and Plant Sciences, University of Sheffield, Western Bank, Sheffield S10 2TN, United 17 Kingdom 18 6Center for the Environment, MSC 63, Plymouth State University, 17 High Street Plymouth, NH 03264 USA 19 7Department of Research, Conservation and Collections, Desert Botanical Garden, 1201 N. Galvin Pkwy, 20 Phoenix, AZ 85008 USA 21 8Florida Museum of Natural History, University of Florida, Gainesville, FL 32611 USA 22 9Sukkulenten-Sammlung Zürich, Mythenquai 88, CH-8002 Zürich, Switzerland 23 24 25 Corresponding authors: Ning Wang, Email: [email protected] 26 Stephen A. -
Systematics of Harrisia (Cactaceae) Alan R
University of South Florida Scholar Commons Graduate Theses and Dissertations Graduate School January 2012 Systematics of Harrisia (Cactaceae) Alan R. Franck University of South Florida, [email protected] Follow this and additional works at: http://scholarcommons.usf.edu/etd Part of the American Studies Commons, Molecular Biology Commons, Plant Sciences Commons, and the Systems Biology Commons Scholar Commons Citation Franck, Alan R., "Systematics of Harrisia (Cactaceae)" (2012). Graduate Theses and Dissertations. http://scholarcommons.usf.edu/etd/4044 This Dissertation is brought to you for free and open access by the Graduate School at Scholar Commons. It has been accepted for inclusion in Graduate Theses and Dissertations by an authorized administrator of Scholar Commons. For more information, please contact [email protected]. Systematics of Harrisia (Cactaceae) by Alan R. Franck A dissertation submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy Department of Cell Biology, Microbiology, and Molecular Biology College of Arts and Sciences University of South Florida Major Professor: James R. Garey, Ph.D. Bruce J. Cochrane, Ph.D. Diane Te Strake, M.A. Richard P. Wunderlin, Ph.D. Date of Approval: 8 June 2012 Keywords: biogeography, monograph, nomenclature, phylogeny, taxonomy Copyright © 2012, Alan R. Franck DEDICATION This work is dedicated to several supportive persons: Peggy L. Brandewie; Maurice Franck; Douglas D. Springer; Annette Franck; Thomas Brandewie; Andrew L. Franck and family; Melanie L. Chamberlain; Andrew Clark; Jeff Hobensack; Christopher Monday; Franck, Brown, Springer, Combs, Brandewie, and Chamberlain families; Kris Sutter and Shawn Moorman; Matt Weigel; J. J. Oakleaf; Gene Russell Rann and Dave Catalfino; and friends. -
(Portulacaceae) from Central Argentina: Morphology and Its Phylogenetic Position
Phytotaxa 332 (1): 041–050 ISSN 1179-3155 (print edition) http://www.mapress.com/j/pt/ PHYTOTAXA Copyright © 2017 Magnolia Press Article ISSN 1179-3163 (online edition) https://doi.org/10.11646/phytotaxa.332.1.4 Rediscovery of a halophytic endemic and rare species of Portulaca (Portulacaceae) from central Argentina: morphology and its phylogenetic position JUAN JOSE CANTERO1, 2*, GLORIA E. BARBOZA2, 3 & GILBERTO OCAMPO4 1Departamento Biología Agrícola, Facultad de Agronomía y Veterinaria, Universidad Nacional de Río Cuarto (UNRC), Ruta Nac. 36, Km. 601, 5804 Río Cuarto, Córdoba, Argentina; email: [email protected] 2Instituto Multidisciplinario de Biología Vegetal (IMBIV-CONICET)-Universidad Nacional de Córdoba (UNC), Av. Vélez Sársfield 299, CC 495, X5000HVA, Córdoba, Argentina. 3Facultad de Ciencias Químicas, UNC. Haya de la Torre y M. Allende s.n., Córdoba, Argentina. 4Departamento de Biología, Centro de Ciencias Básica, Universidad Autónoma de Aguascalientes, Avenida Universidad 940, Ciudad Universitaria, C.P. 20131, Aguascalientes, México. *Author for correspondence Abstract Portulaca ragonesei (Portulacaceae), an extreme halophyte species from Salina de Ambargasta (central Argentina), is here illustrated and re-described based on morphological evidence. In addition, molecular data shows that this endemic species is one of the earliest-divergent lineages of the Oleracea clade. This is a critically endangered species that can be morphologi- cally distinguished by its sprouting geophyte habit, the linear leaves, and the presence of a constriction at the apex of the pixidium where only one seed is found. Keywords: halophyte, phylogeny, Portulaca ragonesei, Salina de Ambargasta Introduction Portulaca Linnaeus (1753: 445) is the only genus belonging to Portulacaceae Juss. a monotypic family according to the molecular studies by Nyffeler & Eggli (2010), and Ocampo & Columbus (2012). -
Flora of St. George Island
PLANTS OF ST. GEORGE ISLAND STATE PARK FRANKLIN COUNTY, FLORIDA • FERNS AND FERN ALLIES Lycopodiella appressa (Chapm.) Cranfill. SOUTHERN CLUBMOSS Osmunda regalis L. ROYAL FERN Polypodium polypodioides (L.) Watt RESURRECTION FERN [Pleopeltis polyp.] Pteridium aquilinum BRACKEN Thelypteris palustris Schott var. haleana Fernald MARSH FERN Woodwardia virginica (L.) J. E. Smith VIRGINIA CHAIN-FERN • GYMNOSPERMS CUPRESSACEAE Juniperus virginiana L. var. silicicola (Small) Silba SOUTHERN RED CEDAR PINACEAE Pinus clausa (Chapm. ex Engelm.) Vasey ex Sarg. SAND PINE Pinus elliottii Engelm. SLASH PINE • ANGIOSPERMS: MONOCOTYLEDONS AGAVACEAE Yucca aloifolia L. SPANISH BAYONET ALISMATACEAE Sagittaria lancifolia L. BULLTONGUE ARROWHEAD ALLIACEAE Allium canadense L. WILD ONION ARECACEAE [PALMAE] Sabal palmetto (Walt.) Lodd. ex Schult. & Schult. CABBAGE PALM Serenoa repens (Bartr.) Small SAW-PALMETTO COMMELINACEAE Commelina diffusa Burm. f. COMMON DAYFLOWER Commelina erecta L. WHITEMOUTH DAYFLOWER Tradescantia ohiensis Raf. COMMON SPIDERWORT CYPERACEAE Bulbostylis ciliatifolia (Ell.) Fern. var. coarctata (Ell.) Kral Carex longii Mack. LONG’S SEDGE Cladium jamaicense Crantz SAWGRASS Cyperus compressus L. POORLAND FLAT-SEDGE Cyperus distinctus Steud. SWAMP FLAT-SEDGE Cyperus esculentus L. YELLOW NUT-GRASS, CHUFA Cyperus haspan L. SOFT-STEM FLAT-SEDGE Cyperus lecontei Torr. LECONTE’S FLAT-SEDGE Cyperus nashii Britt. in Small NASH’S FLAT-SEDGE Cyperus polystachyos Rottb. var. texensis (Torr.) Fern. MANYSPIKE FLAT-SEDGE Cyperus rotundus L. NUT-GRASS Cyperus surinamensis Rottb. TROPICAL FLAT-SEDGE Eleocharis baldwinii (Torr.) Chapm. ROADGRASS Eleocharis cellulosa Torr. GULG COAST SPIKE-RUSH Eleocharis geniculata (L.) R. & S. CANADA SPIKE-RUSH Eleocharis montevidensis Kunth SAND SPIKE-RUSH Fimbristylis caroliniana (Lam.) Fern. CAROLINA FIMBRY Fimbristylis castanea (Michx.) Vahl FRINGERUSH Fuirena scirpoidea Michx. UMBRELLA-SEDGE Psilocarya nitens (Vahl) Wood [= Rhynchospora nitens] BALD-RUSH Rhynchospora colorata (L.) L.Pfeiff.