FDA-ARGOS Database Wanted Organism List (Jan 2019)
Bioterrorism Agents (√ - 5 or more genomes in database) *https://emergency.cdc.gov/agent/agentlist-category.asp)
• Category A ü Bacillus anthracis ü Francisella tularensis ü Yersenia pestis ü Zaire Ebolavirus *** Additional Organisms Needed *** o Ebolavirus (Bundibugyo, Taï Forest, Reston, Sudan) o Lassa mammarenavirus o Machupo mammarenavirus o Marburgvirus o Variola major virus
• Category B ü Burkholderia mallei ü Salmonella ü Shigella ü Venezuelan equine encephalitis *** Additional Organisms Needed *** o Brucella o Burkholderia pseudomallei o Chlamydia psittaci o Coxiella burnetii o Cryptosporidium parvum o Escherichia coli O157:H7 o Rickettsia prowazekii o Vibrio cholera o Eastern equine encephalitis o Western equine encephalitis
• Category C
*** Additional Organisms Needed *** o Nipah henipavirus o Hantaan orthohantavirus
Clinical/Near Neighbor Bacteria (√ - 5 or more genomes in database)
ü Acinetobacter baumannii ü Alcaligenes xylosoxidans ü Bordetella bronchioseptica ü Burkholderia cenocepacia, cepacia, gladioli, mallei, multivorans, thailandensis ü Campylobacter jejuni ü Chryseobacterium indologenes ü Citrobacter freundii, koseri ü Enterobacter aerogenes, cloacae ü Enterococcus avium, faecalis, faecium, gallinarum ü Escherichia coli ü Klebsiella oxytoca, pneumoniae ü Listeria monocytogenes ü Mycobacterium tuberculosis ü Neisseria meningitidis ü Pasteurella multocida ü Proteus mirabilis ü Providencia stuartii ü Pseudomonas aeruginosa, putida ü Rothia mucilaginosa ü Salmonella enterica ü Serratia marcescens ü Shigella flexneri, sonnei ü Staphylococcus aureus, hominis, lugdenensis, saprophyticus ü Stenotrophomonas maltophilia ü Streptococcus agalactiae, pyogenes ü Vibrio alginolyticus, harveyi, parahaemolyticus, vulnificus, enterocolitica ü Yersinia pseudotuberculosis *** Additional Organisms Needed *** o Acinetobacter lwoffi o Aerococcus viridans o Aeromonas caviae o Bacillus o Bacteroides distasonis o Bordetella pertussis o Burkholderia multocida, pseudomallei o Citrobacter amalonaticus, braakii o Clostridium clostridioforme, difficile o Corynebacterium jeikeium o Eikenella corrodens o Elizabethkingia meningoseptica o Enterococcus durans o Escherichia fergusonii o Gardnerella vaginalis o Granulicatella adiacens o Hafnia alvei o Helicobacter pylori o Klebsiella variicola o Micrococcus luteus o Moraxella catarrhalis o Morganella morganii o Neisseria gonorrhoeae o Pantoea agglomerans o Paracoccus yeei o Prevotella melaninogenica o Propionibacterium acnes o Proteus vulgaris o Pseudomonas fluorescens o Ralstonia paucula o Ralstonia pickettii o Raoultella ornithinolytica, planticola o Rhizobium radiobacter o Staphylococcus capitis, cohnii, epidermidis, haemolyticus, simulans, warneri o Streptococcus gordonii, intermedius, mitis, mutans, salivarius o Vibrio cholera, fluvialis, mimicus o Yersinia frederiksenii, intermedia
Clinical/ Near Neighbor Viruses (√ - 5 or more genomes in database) ü Chikungunya virus ü Dengue virus ü Ross River Valley virus ü West Nile virus ü Zika virus *** Additional Organisms Needed *** o Chapare virus o Crimean-Congo hemorrhagic fever virus o Eastern equine encephalitis virus o Guanarito virus o Hendra virus o Junin virus o Lujo virus o Middle East respiratory syndrome-related coronavirus o Monkeypox virus o Rift Valley Fever virus o Sabia Virus o Yellow Fever Virus