Kimberley Marine Biota. Historical Data: fi Shes
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
Dedication Donald Perrin De Sylva
Dedication The Proceedings of the First International Symposium on Mangroves as Fish Habitat are dedicated to the memory of University of Miami Professors Samuel C. Snedaker and Donald Perrin de Sylva. Samuel C. Snedaker Donald Perrin de Sylva (1938–2005) (1929–2004) Professor Samuel Curry Snedaker Our longtime collaborator and dear passed away on March 21, 2005 in friend, University of Miami Professor Yakima, Washington, after an eminent Donald P. de Sylva, passed away in career on the faculty of the University Brooksville, Florida on January 28, of Florida and the University of Miami. 2004. Over the course of his diverse A world authority on mangrove eco- and productive career, he worked systems, he authored numerous books closely with mangrove expert and and publications on topics as diverse colleague Professor Samuel Snedaker as tropical ecology, global climate on relationships between mangrove change, and wetlands and fish communities. Don pollutants made major scientific contributions in marine to this area of research close to home organisms in south and sedi- Florida ments. One and as far of his most afield as enduring Southeast contributions Asia. He to marine sci- was the ences was the world’s publication leading authority on one of the most in 1974 of ecologically important inhabitants of “The ecology coastal mangrove habitats—the great of mangroves” (coauthored with Ariel barracuda. His 1963 book Systematics Lugo), a paper that set the high stan- and Life History of the Great Barracuda dard by which contemporary mangrove continues to be an essential reference ecology continues to be measured. for those interested in the taxonomy, Sam’s studies laid the scientific bases biology, and ecology of this species. -
Monophyly and Interrelationships of Snook and Barramundi (Centropomidae Sensu Greenwood) and five New Markers for fish Phylogenetics ⇑ Chenhong Li A, , Betancur-R
Molecular Phylogenetics and Evolution 60 (2011) 463–471 Contents lists available at ScienceDirect Molecular Phylogenetics and Evolution journal homepage: www.elsevier.com/locate/ympev Monophyly and interrelationships of Snook and Barramundi (Centropomidae sensu Greenwood) and five new markers for fish phylogenetics ⇑ Chenhong Li a, , Betancur-R. Ricardo b, Wm. Leo Smith c, Guillermo Ortí b a School of Biological Sciences, University of Nebraska, Lincoln, NE 68588-0118, USA b Department of Biological Sciences, The George Washington University, Washington, DC 200052, USA c The Field Museum, Department of Zoology, Fishes, 1400 South Lake Shore Drive, Chicago, IL 60605, USA article info abstract Article history: Centropomidae as defined by Greenwood (1976) is composed of three genera: Centropomus, Lates, and Received 24 January 2011 Psammoperca. But composition and monophyly of this family have been challenged in subsequent Revised 3 May 2011 morphological studies. In some classifications, Ambassis, Siniperca and Glaucosoma were added to the Accepted 5 May 2011 Centropomidae. In other studies, Lates + Psammoperca were excluded, restricting the family to Available online 12 May 2011 Centropomus. Recent analyses of DNA sequences did not solve the controversy, mainly due to limited taxonomic or character sampling. The present study is based on DNA sequence data from thirteen Keywords: genes (one mitochondrial and twelve nuclear markers) for 57 taxa, representative of all relevant Centropomidae species. Five of the nuclear markers are new for fish phylogenetic studies. The monophyly of Centrop- Lates Psammoperca omidae sensu Greenwood was supported by both maximum likelihood and Bayesian analyses of a Ambassidae concatenated data set (12,888 bp aligned). No support was found for previous morphological hypothe- Niphon spinosus ses suggesting that ambassids are closely allied to the Centropomidae. -
A New Species of the Genus Pempheris (Teleostei: Pempherididae) from Rapa Lti, French Polynesia 1
Pacific Science (1998), vol. 52, no. 2: 154-160 © 1998 by University of Hawai'i Press. All rights reserved A New Species of the Genus Pempheris (Teleostei: Pempherididae) from Rapa lti, French Polynesia 1 RANDALL D. M00I2 ABSTRACT: Pempheris rapa Mooi, n. sp., is distinguished from congeners by the following combination of characters: scales strongly ctenoid and adherent; no gular scales; pelvic axillary scale absent; dorsal fin with six spines; in speci mens 35 mm SL or larger, gill-raker counts on first arch 11-13 + 26-29 = 37-42 (usually 38-40); lateral-line scales 72-84 (rarely fewer than 76); no anterior light organ; anal fin with 33-37 segmented rays. A second species of Pempheris of uncertain identification, but a member of the cycloid-scaled and keeled species complex that includes P. oualensis, was found among the collec tions of the new species. FISHES OF THE FAMILY Pempherididae, com- more than 27 segmented anal-fin rays (versus monly known as sweepers or bullseyes, are 27 or fewer). small to medium-sized fishes (usually < 200 Collections from the eastern Pacific ex- -mm--staiiQara-1Nl~th-rSt])-fourrd--on--rocky--treme-of--the-range -of--F-empheris- are-uncom- and coral reefs of the tropical and temperate mon. Specimens reported by Randall et al. Indo-Pacific and western Atlantic Oceans to (1990) from Rapa Iti (27° 36' S, 144° 20' W), depths of 100 m. Tominaga (1965) restricted the southernmost island of French Polynesia, the definition of the family to include two were suspected to be an undescribed species genera: Pempheris Cuvier, 1829 (over 30 by Randall and the late Yoshiaki Tominaga nominal species of which fewer than 20 are (J. -
ASFIS ISSCAAP Fish List February 2007 Sorted on Scientific Name
ASFIS ISSCAAP Fish List Sorted on Scientific Name February 2007 Scientific name English Name French name Spanish Name Code Abalistes stellaris (Bloch & Schneider 1801) Starry triggerfish AJS Abbottina rivularis (Basilewsky 1855) Chinese false gudgeon ABB Ablabys binotatus (Peters 1855) Redskinfish ABW Ablennes hians (Valenciennes 1846) Flat needlefish Orphie plate Agujón sable BAF Aborichthys elongatus Hora 1921 ABE Abralia andamanika Goodrich 1898 BLK Abralia veranyi (Rüppell 1844) Verany's enope squid Encornet de Verany Enoploluria de Verany BLJ Abraliopsis pfefferi (Verany 1837) Pfeffer's enope squid Encornet de Pfeffer Enoploluria de Pfeffer BJF Abramis brama (Linnaeus 1758) Freshwater bream Brème d'eau douce Brema común FBM Abramis spp Freshwater breams nei Brèmes d'eau douce nca Bremas nep FBR Abramites eques (Steindachner 1878) ABQ Abudefduf luridus (Cuvier 1830) Canary damsel AUU Abudefduf saxatilis (Linnaeus 1758) Sergeant-major ABU Abyssobrotula galatheae Nielsen 1977 OAG Abyssocottus elochini Taliev 1955 AEZ Abythites lepidogenys (Smith & Radcliffe 1913) AHD Acanella spp Branched bamboo coral KQL Acanthacaris caeca (A. Milne Edwards 1881) Atlantic deep-sea lobster Langoustine arganelle Cigala de fondo NTK Acanthacaris tenuimana Bate 1888 Prickly deep-sea lobster Langoustine spinuleuse Cigala raspa NHI Acanthalburnus microlepis (De Filippi 1861) Blackbrow bleak AHL Acanthaphritis barbata (Okamura & Kishida 1963) NHT Acantharchus pomotis (Baird 1855) Mud sunfish AKP Acanthaxius caespitosa (Squires 1979) Deepwater mud lobster Langouste -
Intertidal Wetlands of Port Curtis
Cooperative Research Centre for Coastal Zone, Estuary & Waterway Management Technical Report 43 Intertidal wetlands of Port Curtis Ecological patterns and processes and their implications Rod M. Connolly, David R. Currie, Karen F. Danaher, Malcolm Dunning, Alistair Melzer, John R. Platten, Damon Shearer, Peter J. Stratford, Peter R. Teasdale, Maria Vandergragt June, 2006 Intertidal wetlands of Port Curtis: ecological patterns and processes, and their implications i Intertidal wetlands of Port Curtis: Ecological patterns and processes, and their implications Copyright © 2006: Cooperative Research Centre for Coastal Zone, Estuary and Waterway Management Written by: Rod M. Connolly David R. Currie Karen F. Danaher Malcolm Dunning Alistair Melzer John R. Platten Damon Shearer Peter J. Stratford Peter R. Teasdale Maria Vandergragt Published by the Cooperative Research Centre for Coastal Zone, Estuary and Waterway Management (Coastal CRC) Indooroopilly Sciences Centre 80 Meiers Road Indooroopilly Qld 4068 Australia www.coastal.crc.org.au The text of this publication may be copied and distributed for research and educational purposes with proper acknowledgment. Photos cannot be reproduced without permission of the copyright holder. Disclaimer: The information in this report was current at the time of publication. While the report was prepared with care by the authors, the Coastal CRC and its partner organisations accept no liability for any matters arising from its contents. National Library of Australia Cataloguing-in-Publication data Intertidal wetlands of Port Curtis: Ecological patterns and processes, and their implications QNRM06210 ISBN 1 921017 28 7 (print) ISBN 1 921017 29 5 (online) ii Intertidal wetlands of Port Curtis: ecological patterns and processes, and their implications Rod M. -
Pleistocene Diversification of the Pomacentrus Coelestis Species Complex (Pisces: Pomacentridae): Historical Biogeography and Species Boundaries
Pleistocene diversification of the Pomacentrus coelestis species complex (Pisces: Pomacentridae): historical biogeography and species boundaries Laurie Sorenson, Gerald R. Allen, Mark V. Erdmann, Chang-Feng Dai & Shang- Yin Vanson Liu Marine Biology International Journal on Life in Oceans and Coastal Waters ISSN 0025-3162 Mar Biol DOI 10.1007/s00227-014-2521-8 1 23 Your article is protected by copyright and all rights are held exclusively by Springer- Verlag Berlin Heidelberg. This e-offprint is for personal use only and shall not be self- archived in electronic repositories. If you wish to self-archive your article, please use the accepted manuscript version for posting on your own website. You may further deposit the accepted manuscript version in any repository, provided it is only made publicly available 12 months after official publication or later and provided acknowledgement is given to the original source of publication and a link is inserted to the published article on Springer's website. The link must be accompanied by the following text: "The final publication is available at link.springer.com”. 1 23 Author's personal copy Mar Biol DOI 10.1007/s00227-014-2521-8 ORIGINAL PAPER Pleistocene diversification of the Pomacentrus coelestis species complex (Pisces: Pomacentridae): historical biogeography and species boundaries Laurie Sorenson · Gerald R. Allen · Mark V. Erdmann · Chang‑Feng Dai · Shang‑Yin Vanson Liu Received: 2 April 2014 / Accepted: 8 August 2014 © Springer-Verlag Berlin Heidelberg 2014 Abstract Pleistocene eustatic changes in sea level are (P. micronesicus, P. auriventris, and P. coelestis) species often invoked to explain genetic divergence among marine groups, and subsequent isolation by Pleistocene sea-level organisms. -
The Etyfish Project © Christopher Scharpf and Kenneth J
CARANGIFORMES (part 1) · 1 The ETYFish Project © Christopher Scharpf and Kenneth J. Lazara COMMENTS: v. 1.0 - 18 July 2020 Series CARANGARIA Order CARANGIFORMES (part 1 of 4) Suborder CENTROPOMOIDEI Family LATIDAE Giant Perches 3 genera · 14 species · Taxonomic note: nested within Centropomidae by some workers. Hypopterus Gill 1861 hypo-, ventral or below; pterus, fin, allusion not explained, presumably referring to anal fin, described as longer than dorsal fin Hypopterus macropterus (Günther 1859) macro-, long or large; ptera, fin, allusion not explained, presumably referring “very long” third spine of dorsal fin and/ or “long” anal fin Lates Cuvier 1828 from latès or latos, local name for L. niloticus since the “time of the ancients” (translation) Lates angustifrons Boulenger 1906 angustus, narrow; frons, front, face or brow, referring to “much narrower interorbital region” compared to the closely related L. microlepis Lates calcarifer (Bloch 1790) calcar, spur; fero, to bear, referring to four spines on operculum, “which resemble a spur” (translation) Lates japonicus Katayama & Taki 1984 Japanese, known only from the western North Pacific of Japan Lates lakdiva Pethiyagoda & Gill 2012 Lakdiva, Sinhalese name for island of Sri Lanka, only known area of occurrence Lates longispinis Worthington 1932 longus, long; spinis, spine, proposed as a subspecies of L. niloticus with a longer third spine of dorsal fin Lates macrophthalmus Worthington 1929 macro-, large; ophthalmus, referring to larger eye compared to L. niloticus Lates mariae Steindachner 1909 in honor of Maria Horn who, with her husband Adolf, explored German East-Africa (present-day Burundi and Tanzania), collecting specimens for the Vienna Museum, including type of this one Lates microlepis Boulenger 1898 micro-, small; lepis, scale, referring to smaller scales compared to L. -
Appendix F. AIMS Regional Shoals and Shelf
Appendix F. AIMS Regional Shoals and Shelf Assessment (Heyward et al. 2017) *ODMVEFT"EEFOEVN 3FHJPOBM#JPEJWFSTJUZ1BUUFSOTBOE$POOFDUJWJUZ"NPOHTUUIF 4VCNFSHFE4IPBMTBOE#BOLTJO3FMBUJPOUPUIF"SFBPG*OGMVFODF GSPNB)ZQPUIFUJDBM6ODPOUSPMMFE3FMFBTF BAROSSA ENVIRONMENTAL BASELINE STUDY 2015 AIMS FINAL REPORT SERINGAPATAM REEF BASELINE SURVEYS 2012-2013 Regional Shoals & Shelf Assessment 2015 Authors: Andrew Heyward, Ben Radford, Mike Cappo, Mary Wakeford, Rebecca Fisher, Jamie Colquhoun, Mark Case, Marcus Stowar, Karen Miller PRODUCED FOR ConocoPhillips Australia Pty Ltd Contract No. 251834.0-MSA-COMP-2.0 PERTH April 2017 Rev 1 BAROSSA ENVIRONMENTAL BASELINE STUDY 2015 AIMS FINAL REPORT SERINGAPATAM REEF BASELINE SURVEYS 2012-2013 Final: 30 March 2009 Australian Institute of Marine Science PMB No 3 Townsville MC Qld 4810 University of Western Australia Oceans Institute (M096) 35 Stirling Hwy Crawley WA 6009 PO Box 41775 Casuarina NT 0811 This report should be cited as: A Heyward et al. 2017; Barossa Environmental Baseline Study, Regional Shoals and Shelf Assessment 2015 Final Report. A report for ConocoPhillips Australia Exploration Pty Ltd by the Australian Institute of Marine Science, Perth 2017. 143pp Corresponding Author: Dr Andrew Heyward [email protected] © Copyright Australian Institute of Marine Science (AIMS) and ConocoPhillips Australia Pty Ltd. 2017 All rights are reserved and no part of this document may be reproduced, stored or copied in any form or by any means whatsoever except with the prior written permission of AIMS and COPA. Revision History Issue Rev 1 Apr 2017 Issue Rev 0 Oct 2016 Draft Rev B Sept 2016 Draft Rev A June 2016 Acknowledgments: This survey relied on the professionalism and support of RV Solander’s Master & crew. -
Phylogenomic Analysis of Carangimorph Fishes Reveals Flatfish Asymmetry Arose in a Blink of the Evolutionary Eye Richard C
Harrington et al. BMC Evolutionary Biology (2016) 16:224 DOI 10.1186/s12862-016-0786-x RESEARCHARTICLE Open Access Phylogenomic analysis of carangimorph fishes reveals flatfish asymmetry arose in a blink of the evolutionary eye Richard C. Harrington1,2*, Brant C. Faircloth3, Ron I. Eytan4, W. Leo Smith5, Thomas J. Near2, Michael E. Alfaro6 and Matt Friedman1,7 Abstract Background: Flatfish cranial asymmetry represents one of the most remarkable morphological innovations among vertebrates, and has fueled vigorous debate on the manner and rate at which strikingly divergent phenotypes evolve. A surprising result of many recent molecular phylogenetic studies is the lack of support for flatfish monophyly, where increasingly larger DNA datasets of up to 23 loci have either yielded a weakly supported flatfish clade or indicated the group is polyphyletic. Lack of resolution for flatfish relationships has been attributed to analytical limitations for dealing with processes such as nucleotide non-stationarity and incomplete lineage sorting (ILS). We tackle this phylogenetic problem using a sequence dataset comprising more than 1,000 ultraconserved DNA element (UCE) loci covering 45 carangimorphs, the broader clade containing flatfishes and several other specialized lineages such as remoras, billfishes, and archerfishes. Results: We present a phylogeny based on UCE loci that unequivocally supports flatfish monophyly and a single origin of asymmetry. We document similar levels of discordance among UCE loci as in previous, smaller molecular datasets. However, relationships among flatfishes and carangimorphs recovered from multilocus concatenated and species tree analyses of our data are robust to the analytical framework applied and size of data matrix used. By integrating the UCE data with a rich fossil record, we find that the most distinctive carangimorph bodyplans arose rapidly during the Paleogene (66.0–23.03 Ma). -
Functional Niche Partitioning in Herbivorous Coral Reef Fishes
ResearchOnline@JCU This file is part of the following reference: Brandl, Simon Johannes (2016) Functional niche partitioning in herbivorous coral reef fishes. PhD thesis, James Cook University. Access to this file is available from: http://researchonline.jcu.edu.au/45253/ The author has certified to JCU that they have made a reasonable effort to gain permission and acknowledge the owner of any third party copyright material included in this document. If you believe that this is not the case, please contact [email protected] and quote http://researchonline.jcu.edu.au/45253/ Functional niche partitioning in herbivorous coral reef fishes Thesis submitted by: Simon Johannes Brandl January 2016 For the degree: Doctor of Philosophy College of Marine and Environmental Sciences ARC Centre of Excellence for Coral Reef Studies James Cook University i Acknowledgements I am deeply indebted to my supervisor, David Bellwood, whose invaluable intellectual and emotional support has been the cornerstone of my degree. His outstanding guidance, astute feedback, incredible generosity, and tremendous patience cannot be credited adequately within the scope of this acknowledgements section. Besides his supervisory contribution to my degree, I am grateful for the countless hours full of cheerful negotiations, curly remarks, philosophical debates, humorous chitchat, and priceless counselling. I also thank everybody who has helped me in the field: Jordan Casey, Christopher Goatley, Jennifer Hodge, James Kerry, Michael Kramer, Katia Nicolet, Justin Welsh, and the entire staff of Lizard Island Research Station. I am especially grateful for Christopher Mirbach’s help, commitment, and loyalty throughout many weeks of fieldwork. This thesis would have been impossible without his dedication and enthusiasm for marine fieldwork. -
A Protocol for Identifying Suitable Biomarkers to Assess Fish Health: a Systematic Review
RESEARCH ARTICLE A protocol for identifying suitable biomarkers to assess fish health: A systematic review Frederieke Kroon1☯*, Claire Streten2☯, Simon Harries2☯ 1 Australian Institute of Marine Science, Townsville, Queensland, Australia, 2 Australian Institute of Marine Science, Arafura Timor Research Facility, Brinkin, Northern Territory, Australia ☯ These authors contributed equally to this work. * [email protected] a1111111111 Abstract a1111111111 a1111111111 a1111111111 a1111111111 Background Biomarkers have been used extensively to provide the connection between external levels of contaminant exposure, internal levels of tissue contamination, and early adverse effects in organisms. OPEN ACCESS Citation: Kroon F, Streten C, Harries S (2017) A Objectives protocol for identifying suitable biomarkers to To present a three-step protocol for identifying suitable biomarkers to assess fish health in assess fish health: A systematic review. PLoS ONE 12(4): e0174762. https://doi.org/10.1371/journal. coastal and marine ecosystems, using Gladstone Harbour (Australia) as a case study. pone.0174762 Editor: James P. Meador, Northwest Fisheries Methods Science Center, UNITED STATES Prior to applying our protocol, clear working definitions for biomarkers were developed to Received: October 23, 2016 ensure consistency with the global literature on fish health assessment. First, contaminants Accepted: March 15, 2017 of concern were identified based on the presence of point and diffuse sources of pollution Published: April 12, 2017 and available monitoring data for the ecosystem of interest. Second, suitable fish species were identified using fisheries dependent and independent data, and prioritised based on Copyright: © 2017 Kroon et al. This is an open access article distributed under the terms of the potential pathways of exposure to the contaminants of concern. -
Family-Group Names in Recent Fishes 20 Sept. 2013
Family-group names of Recent fishes RICHARD VAN DER LAAN1,5, WILLIAM N. ESCHMEYER2 & RONALD FRICKE3,4 1Grasmeent 80, 1357JJ Almere, The Netherlands. E-mail: [email protected] 2Curator Emeritus, California Academy of Sciences, 55 Music Concourse Drive, San Francisco, CA 94118, USA. E-mail: [email protected] 3Im Ramstal 76, 97922 Lauda-Königshofen, Germany. E-mail: [email protected] 4Staatliches Museum für Naturkunde Stuttgart, Rosenstein 1, D-70191 Stuttgart, Germany [temporarily out of office] 5Corresponding author Class Myxini Order Myxiniformes Family Myxinidae Rafinesque 1815 Subfamily Myxininae Rafinesque 1815 Missinidi Rafinesque 1810b:49 [ref. 3595] (ordine) ? Myxine [published not in latinized form before 1900; not available, article 11.7.2] Myxinia Rafinesque 1815:94 [ref. 3584] (subfamily) Myxine [stem Myxin- confirmed by Gray 1851:147 [ref. 4939] and by Günther 1870:510 [ref. 1995]] Diporobranchia Latreille 1825:112 [ref. 31889] (family) ‘Gastrobranche’ [no stem of the type genus, not available, article 11.7.1.1] Gastrobranchini Bonaparte 1831:165, 189 [ref. 4978] (subfamily) Gastrobranchus Subfamily Eptatretinae Bonaparte 1850 Heptatremini Bonaparte 1850b [ref. 32551] (subfamily) Eptatretus [Heptatrema / Heptatremus inferred from the stem, article 11.7.1.1; name must be corected article 32.5.3; stem corrected to Eptatret- by Gill 1901:738 [ref. 9562] and by Jordan & Snyder 1901b:728 [ref. 9568], confirmed by Jordan 1923a:82 [ref. 2421], by Kamohara 1967:1 and by Sato in Masuda, Amaoka, Araga, Uyeno & Yoshino 1984:1 [ref. 6441]; family name sometimes seen as Heptotremidae or Heptatretidae] Bdellostomidae Gill 1872:25 [ref. 26254] (family) Bdellostoma [corrected to Bdellostomatidae by Jordan & Gilbert 1883:967 [ref.