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Reef Fish Biodiversity in the Florida Keys National Marine Sanctuary Megan E
University of South Florida Scholar Commons Graduate Theses and Dissertations Graduate School November 2017 Reef Fish Biodiversity in the Florida Keys National Marine Sanctuary Megan E. Hepner University of South Florida, [email protected] Follow this and additional works at: https://scholarcommons.usf.edu/etd Part of the Biology Commons, Ecology and Evolutionary Biology Commons, and the Other Oceanography and Atmospheric Sciences and Meteorology Commons Scholar Commons Citation Hepner, Megan E., "Reef Fish Biodiversity in the Florida Keys National Marine Sanctuary" (2017). Graduate Theses and Dissertations. https://scholarcommons.usf.edu/etd/7408 This Thesis is brought to you for free and open access by the Graduate School at Scholar Commons. It has been accepted for inclusion in Graduate Theses and Dissertations by an authorized administrator of Scholar Commons. For more information, please contact [email protected]. Reef Fish Biodiversity in the Florida Keys National Marine Sanctuary by Megan E. Hepner A thesis submitted in partial fulfillment of the requirements for the degree of Master of Science Marine Science with a concentration in Marine Resource Assessment College of Marine Science University of South Florida Major Professor: Frank Muller-Karger, Ph.D. Christopher Stallings, Ph.D. Steve Gittings, Ph.D. Date of Approval: October 31st, 2017 Keywords: Species richness, biodiversity, functional diversity, species traits Copyright © 2017, Megan E. Hepner ACKNOWLEDGMENTS I am indebted to my major advisor, Dr. Frank Muller-Karger, who provided opportunities for me to strengthen my skills as a researcher on research cruises, dive surveys, and in the laboratory, and as a communicator through oral and presentations at conferences, and for encouraging my participation as a full team member in various meetings of the Marine Biodiversity Observation Network (MBON) and other science meetings. -
Jarvis Island NWR Final
Jarvis Island National Wildlife Refuge Comprehensive Conservation Plan FINDING OF NO SIGNIFICANT IMPACT Jarvis Island National Wildlife Refuge Comprehensive Conservation Plan Unincorporated U.S. Territory, Central Pacific Ocean The U.S. Fish and Wildlife Service (Service) has completed the Comprehensive Conservation Plan (CCP) and Environmental Assessment (EA) for Jarvis Island National Wildlife Refuge (Refuge). The CCP will guide management of the Refuge for the next 15 years. The CCP and EA describe the Service’s preferred alternative for managing the Refuge and its effects on the human environment. Decision Following comprehensive review and analysis, the Service selected Alternative B in the draft EA for implementation because it is the alternative that best meets the following criteria: Achieves the mission of the National Wildlife Refuge System. Achieves the purposes of the Refuge. Will be able to achieve the vision and goals for the Refuge. Maintains and restores the ecological integrity of the habitats and plant and animal populations at the Refuge. Addresses the important issues identified during the scoping process. Addresses the legal mandates of the Service and the Refuge. Is consistent with the scientific principles of sound wildlife management. Can be implemented within the projected fiscal and logistical management constraints associated with the Refuge’s remote location. As described in detail in the CCP and EA, implementing the selected alternative will have no significant impacts on any of the natural or cultural resources identified in the CCP and EA. Public Review The planning process incorporated a variety of public involvement techniques in developing and reviewing the CCP. This included three planning updates, meetings with partners, and public review and comment on the planning documents. -
Appendix E: Fish Species List
Appendix F. Fish Species List Common Name Scientific Name American shad Alosa sapidissima arrow goby Clevelandia ios barred surfperch Amphistichus argenteus bat ray Myliobatis californica bay goby Lepidogobius lepidus bay pipefish Syngnathus leptorhynchus bearded goby Tridentiger barbatus big skate Raja binoculata black perch Embiotoca jacksoni black rockfish Sebastes melanops bonehead sculpin Artedius notospilotus brown rockfish Sebastes auriculatus brown smoothhound Mustelus henlei cabezon Scorpaenichthys marmoratus California halibut Paralichthys californicus California lizardfish Synodus lucioceps California tonguefish Symphurus atricauda chameleon goby Tridentiger trigonocephalus cheekspot goby Ilypnus gilberti chinook salmon Oncorhynchus tshawytscha curlfin sole Pleuronichthys decurrens diamond turbot Hypsopsetta guttulata dwarf perch Micrometrus minimus English sole Pleuronectes vetulus green sturgeon* Acipenser medirostris inland silverside Menidia beryllina jacksmelt Atherinopsis californiensis leopard shark Triakis semifasciata lingcod Ophiodon elongatus longfin smelt Spirinchus thaleichthys night smelt Spirinchus starksi northern anchovy Engraulis mordax Pacific herring Clupea pallasi Pacific lamprey Lampetra tridentata Pacific pompano Peprilus simillimus Pacific sanddab Citharichthys sordidus Pacific sardine Sardinops sagax Pacific staghorn sculpin Leptocottus armatus Pacific tomcod Microgadus proximus pile perch Rhacochilus vacca F-1 plainfin midshipman Porichthys notatus rainwater killifish Lucania parva river lamprey Lampetra -
Satellite Monitoring of Coastal Marine Ecosystems a Case from the Dominican Republic
Satellite Monitoring of Coastal Marine Ecosystems: A Case from the Dominican Republic Item Type Report Authors Stoffle, Richard W.; Halmo, David Publisher University of Arizona Download date 04/10/2021 02:16:03 Link to Item http://hdl.handle.net/10150/272833 SATELLITE MONITORING OF COASTAL MARINE ECOSYSTEMS A CASE FROM THE DOMINICAN REPUBLIC Edited By Richard W. Stoffle David B. Halmo Submitted To CIESIN Consortium for International Earth Science Information Network Saginaw, Michigan Submitted From University of Arizona Environmental Research Institute of Michigan (ERIM) University of Michigan East Carolina University December, 1991 TABLE OF CONTENTS List of Tables vi List of Figures vii List of Viewgraphs viii Acknowledgments ix CHAPTER ONE EXECUTIVE SUMMARY 1 The Human Dimensions of Global Change 1 Global Change Research 3 Global Change Theory 4 Application of Global Change Information 4 CIESIN And Pilot Research 5 The Dominican Republic Pilot Project 5 The Site 5 The Research Team 7 Key Findings 7 CAPÍTULO UNO RESUMEN GENERAL 9 Las Dimensiones Humanas en el Cambio Global 9 La Investigación del Cambio Global 11 Teoría del Cambio Global 12 Aplicaciones de la Información del Cambio Global 13 CIESIN y la Investigación Piloto 13 El Proyecto Piloto en la República Dominicana 14 El Lugar 14 El Equipo de Investigación 15 Principales Resultados 15 CHAPTER TWO REMOTE SENSING APPLICATIONS IN THE COASTAL ZONE 17 Coastal Surveys with Remote Sensing 17 A Human Analogy 18 Remote Sensing Data 19 Aerial Photography 19 Landsat Data 20 GPS Data 22 Sonar -
Report on the Monitoring of Radionuclides in Fishery Products (March 2011 - January 2015)
Report on the Monitoring of Radionuclides in Fishery Products (March 2011 - January 2015) April 2015 Fisheries Agency of Japan 0 1 Table of Contents Overview…………………………………………………………………………………………………. 8 The Purpose of this Report………………………………………………………………………………9 Part One. Efforts to Guarantee the Safety of Fishery Products………………………………………..11 Chapter 1. Monitoring of Radioactive Materials in Food; Restrictions on Distribution and Other Countermeasures………...…………………………………………………………………11 1-1-1 Standard Limits for Radioactive Materials in Food………………………………………...……11 1-1-2 Methods of Testing for Radioactive Materials………………………………………...…………12 1-1-3 Inspections of Fishery Products for Radioactive Materials…………………………...…………14 1-1-4 Restrictions and Suspensions on Distribution and Shipping ……………………………………..18 1-1-5 Cancellation of Restrictions on Shipping and Distribution………………………………………20 Box 1 Calculation of the Limits for Human Consumption……..………………………………………23 Box 2 Survey of Radiation Dose from Radionuclides in Foods Calculation of the Limits…………….24 Box 3 Examples of Local Government Monitoring Plan………………………………...…………….25 Chapter 2. Results of Radioactive Cesium Inspections for Fishery Products…………………………26 1-2-1 Inspection Results for Nationwide Fishery Products in Japan (in total)…………………………26 1-2-2 Inspection Results for Fukushima Prefecture Fishery Products (all)…………………………….27 1-2-3 Inspection Results for Fishery Products (all) from Outside Fukushima Prefecture……………...30 1-2-4 Trends within Fish Species……………………………………………………………………….32 1-2-5 Inspection Results for Main Target Fish Species of Fishing and Farming by Fiscal Year……….42 1-2-6 Radioactive Material Concentrations within Fish within 20 km of the Fukushima Daiichi NPS.46 Box 4 Fukushima Fishing Trials………………………………...……………………………………...47 1-2-7 Screening Test by Prefectural and Municipal Governments……………………………………..48 Chapter 3. Inspection for Radionuclides Other Than Radioactive Cesium……………………………49 1-3-1 Inspections for Radioactive Strontium etc. -
Larvae of the Moorish Idol, Zanclus Cornutus, Including a Comparison with Other Larval Acanthuroids
BULLETIN OF MARINE SCIENCE. 40(3): 494-511. 1987 CORAL REEF PAPER LARVAE OF THE MOORISH IDOL, ZANCLUS CORNUTUS, INCLUDING A COMPARISON WITH OTHER LARVAL ACANTHUROIDS G. David Johnson and Betsy B. Washington ABSTRACT The larvae of Zane/us carnutus are described and illustrated based on one postflexion and several preflexion specimens. In addition to general morphology and pigmentation, bony ornamentation ofthe head bones and other osteological features are described in detail. Head bones and the associated ornamentation are illustrated for larval Zane/us, Siganus. Luvarus and Nasa. These and other aspects of the morphology of larval acanthuroids are compared and discussed within the context of a phylogenetic hypothesis proposed in other current work. Larval characters corroborate the monophyly of the Acanthuroidei and the phyletic sequence, Siganidae, Luvaridae, Zanc1idae, Acanthuridae. The Acanthuridae is represented by three distinct larval forms. The moorish idol, Zane/us cornutus (Linnaeus), Family Zanclidae, occurs in tropical waters of the Indo-Pacific and eastern Pacific. Like the closely related Acanthuridae, adult Zane/us are reef-associated fishes, but the young are spe- cialized for a relatively prolonged pelagic existence. The specialized pelagic pre- juvenile is termed the "acronurus" stage, and, at least in acanthurids, may reach a length of 60 mm or more before settling (Leis and Rennis, 1983). Strasburg (1962) briefly described 13.4 and 16.0-mm SL specimens ofthe monotypic Zan- e/us and illustrated the larger specimens. Eggs, preflexion larvae and small post- flexion larvae of Zane/us have not been described (Leis and Richards, 1984). The primary purposes of this paper are to describe a 9.S-mm SL postflexion larva of Zane/us and to compare its morphology to that of postflexion larvae of other acanthuroids in a phylogenetic context. -
Order GASTEROSTEIFORMES PEGASIDAE Eurypegasus Draconis
click for previous page 2262 Bony Fishes Order GASTEROSTEIFORMES PEGASIDAE Seamoths (seadragons) by T.W. Pietsch and W.A. Palsson iagnostic characters: Small fishes (to 18 cm total length); body depressed, completely encased in Dfused dermal plates; tail encircled by 8 to 14 laterally articulating, or fused, bony rings. Nasal bones elongate, fused, forming a rostrum; mouth inferior. Gill opening restricted to a small hole on dorsolat- eral surface behind head. Spinous dorsal fin absent; soft dorsal and anal fins each with 5 rays, placed posteriorly on body. Caudal fin with 8 unbranched rays. Pectoral fins large, wing-like, inserted horizon- tally, composed of 9 to 19 unbranched, soft or spinous-soft rays; pectoral-fin rays interconnected by broad, transparent membranes. Pelvic fins thoracic, tentacle-like,withI spine and 2 or 3 unbranched soft rays. Colour: in life highly variable, apparently capable of rapid colour change to match substrata; head and body light to dark brown, olive-brown, reddish brown, or almost black, with dorsal and lateral surfaces usually darker than ventral surface; dorsal and lateral body surface often with fine, dark brown reticulations or mottled lines, sometimes with irregular white or yellow blotches; tail rings often encircled with dark brown bands; pectoral fins with broad white outer margin and small brown spots forming irregular, longitudinal bands; unpaired fins with small brown spots in irregular rows. dorsal view lateral view Habitat, biology, and fisheries: Benthic, found on sand, gravel, shell-rubble, or muddy bottoms. Collected incidentally by seine, trawl, dredge, or shrimp nets; postlarvae have been taken at surface lights at night. -
The Genome of the Gulf Pipefish Enables Understanding of Evolutionary Innovations C
Small et al. Genome Biology (2016) 17:258 DOI 10.1186/s13059-016-1126-6 RESEARCH Open Access The genome of the Gulf pipefish enables understanding of evolutionary innovations C. M. Small1†, S. Bassham1†, J. Catchen1,2†, A. Amores3, A. M. Fuiten1, R. S. Brown1,4, A. G. Jones5 and W. A. Cresko1* Abstract Background: Evolutionary origins of derived morphologies ultimately stem from changes in protein structure, gene regulation, and gene content. A well-assembled, annotated reference genome is a central resource for pursuing these molecular phenomena underlying phenotypic evolution. We explored the genome of the Gulf pipefish (Syngnathus scovelli), which belongs to family Syngnathidae (pipefishes, seahorses, and seadragons). These fishes have dramatically derived bodies and a remarkable novelty among vertebrates, the male brood pouch. Results: We produce a reference genome, condensed into chromosomes, for the Gulf pipefish. Gene losses and other changes have occurred in pipefish hox and dlx clusters and in the tbx and pitx gene families, candidate mechanisms for the evolution of syngnathid traits, including an elongated axis and the loss of ribs, pelvic fins, and teeth. We measure gene expression changes in pregnant versus non-pregnant brood pouch tissue and characterize the genomic organization of duplicated metalloprotease genes (patristacins) recruited into the function of this novel structure. Phylogenetic inference using ultraconserved sequences provides an alternative hypothesis for the relationship between orders Syngnathiformes and Scombriformes. Comparisons of chromosome structure among percomorphs show that chromosome number in a pipefish ancestor became reduced via chromosomal fusions. Conclusions: The collected findings from this first syngnathid reference genome open a window into the genomic underpinnings of highly derived morphologies, demonstrating that de novo production of high quality and useful reference genomes is within reach of even small research groups. -
Reproductive Biology of Acanthurus Coeruleus (Bloch & Schneider, 1801) (Perciformes: Acanthuridae) in the North Coast of the State of Pernambuco, Brazil
Reproductive biology of Acanthurus coeruleus (Bloch & Schneider, 1801) (Perciformes: Acanthuridae) in the north coast of the State of Pernambuco, Brazil RAILMA MARIA VILANOVA QUEIROZ1, MARIANA GOMEZ DO RÊGO2, FABIO HISSA VIEIRA HAZIN1 & PAULO GUILHERME VASCONCELOS DE OLIVEIRA1 1 Universidade Federal Rural de Pernambuco, Departamento de Pesca e Aqüicultura, Av. Dom Manoel de Medeiros s/n, Dois Irmãos, 52171-900, Recife, Pernambuco, Brasil. 2 Universidade Federal Rural de Pernambuco, Departamento de Morfologia e Fisiologia Animal, Av. Dom Manoel de Medeiros s/n, Dois Irmãos, 52171-900, Recife, Pernambuco, Brasil. *Corresponding author: [email protected] Abstract. The objective of this work was to determine aspects of reproductive biology of Blue tang surgeonfish, Acanthurus coeruleus. 496 specimens were sampled, between January 2013 and December 2015, out of which, 235 were male and 261 were female. Sexual ratio did not significanlty differ among genders, and a ratio of 1.11 females per 1 male was found. Total length frequency distribution ranged from 14 to 41.7 cm with predominance of females in the 24-32 cm classes and of males in the 26- 32 cm classes. The estimated allometric coefficient (2.7695), suggests that the species presents negative allometric growth. According to the GSI and the gonads histological analysis, the reproductive period of the species occurs from June to January with periods of greater reproductive activity from August. The oocyte diameter-frequency distribution analysis revealed a multimodal distribution, confirming the evidence of multiple spawning and batch fecundity varied from 20000 to 55000 oocytes. Spawning frequency estimates, based on the hydrated oocytes (HO) method indicated that the species spawns once every 3.8 days, while the estimates based on the post-ovulatory follicle (POF) method indicated a spawning every 3.4 days, during a 6-month spawning season lasting from August to January. -
Reef Fishes of the Bird's Head Peninsula, West
Check List 5(3): 587–628, 2009. ISSN: 1809-127X LISTS OF SPECIES Reef fishes of the Bird’s Head Peninsula, West Papua, Indonesia Gerald R. Allen 1 Mark V. Erdmann 2 1 Department of Aquatic Zoology, Western Australian Museum. Locked Bag 49, Welshpool DC, Perth, Western Australia 6986. E-mail: [email protected] 2 Conservation International Indonesia Marine Program. Jl. Dr. Muwardi No. 17, Renon, Denpasar 80235 Indonesia. Abstract A checklist of shallow (to 60 m depth) reef fishes is provided for the Bird’s Head Peninsula region of West Papua, Indonesia. The area, which occupies the extreme western end of New Guinea, contains the world’s most diverse assemblage of coral reef fishes. The current checklist, which includes both historical records and recent survey results, includes 1,511 species in 451 genera and 111 families. Respective species totals for the three main coral reef areas – Raja Ampat Islands, Fakfak-Kaimana coast, and Cenderawasih Bay – are 1320, 995, and 877. In addition to its extraordinary species diversity, the region exhibits a remarkable level of endemism considering its relatively small area. A total of 26 species in 14 families are currently considered to be confined to the region. Introduction and finally a complex geologic past highlighted The region consisting of eastern Indonesia, East by shifting island arcs, oceanic plate collisions, Timor, Sabah, Philippines, Papua New Guinea, and widely fluctuating sea levels (Polhemus and the Solomon Islands is the global centre of 2007). reef fish diversity (Allen 2008). Approximately 2,460 species or 60 percent of the entire reef fish The Bird’s Head Peninsula and surrounding fauna of the Indo-West Pacific inhabits this waters has attracted the attention of naturalists and region, which is commonly referred to as the scientists ever since it was first visited by Coral Triangle (CT). -
“The Secret Lives of Seahorses” Exhibit Press Kit Click on Headings Below to Go Directly to a Specific Page of the Press Kit
“The Secret Lives of Seahorses” Exhibit Press Kit Click on headings below to go directly to a specific page of the press kit. 1. Main Exhibit News Release 2. Exhibit Fact Sheet 3. Exhibit Gallery Tour 4. Exhibit Animals 5. Seahorse Conservation News Release NEWS RELEASE FOR IMMEDIATE RELEASE For information contact: March 23, 2009 Angela Hains: (831) 647-6804; [email protected] Karen Jeffries: (831) 644-7548; [email protected] Ken Peterson: (831) 648-4922; [email protected] DURING ITS SILVER ANNIVERSARY YEAR, AQUARIUM UNVEILS “THE SECRET LIVES OF SEAHORSES” ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ New special exhibition offers an intimate look at these fascinating, fragile fishes Seahorses have been celebrated in art, literature and mythology for centuries, so you’d think we know a lot about them. In “The Secret Lives of Seahorses,” the Monterey Bay Aquarium’s new special exhibition, you’ll discover that nothing could be further from the truth. Beginning April 6, more than 15 species of seahorses, sea dragons and pipefish will beckon visitors into the elusive world of these charismatic creatures. The Secret Lives of Seahorses highlights the varied habitats in which seahorses and their relatives live, and shares important stories about the threats they face in the wild. “Seahorses are wonderful ambassadors for ocean conservation because they live in the most endangered habitats in the world – coral reefs, sea grass beds and mangrove forests,” said Ava Ferguson, senior exhibit developer for The Secret Lives of Seahorses. “When you save a seahorse, you also save some of Earth’s most precious marine habitats.” Through wrought-iron gates, visitors will enter the first gallery, “Seahorses and Kin,” and meet the seahorse family: fishes that have fused jaws and bony plates in place of the scales normally associated with fish. -
Biota Colombiana Vol
Biota Colombiana Vol. 9 (2), 2008 Una publicación del / A publication of: Instituto Alexander von Humboldt En asocio con / In collaboration with: Instituto de Ciencias Naturales de la Universidad Nacional de Colombia Instituto de Investigaciones Marinas y Costeras - Invemar BIOTA COLOMBIANA Missouri Botanical Garden ISSN 0124-5376 Volumen 9 - Número 2, diciembre de 2008 Checklist of the Freshwater Fishes of Colombia • Listado de especies espinosas de Solanum L. (Leptostemonum, Solanaceae) • Anfibios y reptiles en el departamento del Valle del Cauca, Colombia • Peces del Oriente de Antioquia, Colombia • Una nueva especie de Liotyphlops Peters, 1881 (Serpentes, Scolecophidia, Anomalepidae) del sur de la Amazonia Colombiana • Checklist of the Freshwater Fishes of Colombia • Listado de LISTADOS TAXONÓMICOS / TAXONOMIC LIST especies espinosas de Solanum L. (Leptostemonum, Solanaceae) • Anfibios y reptiles en el departamento del Valle del Cauca, Colombia • Peces del Oriente de Antioquia, Colombia • Una nueva especie de Liotyphlops Peters, 1881 (Serpentes, Scolecophidia, Anomalepidae) del sur de la Amazonia Listados Nacionales / National Lists Colombiana • Checklist of the Freshwater Fishes of Colombia • Listado de especies espinosas de Solanum L. (Leptostemonum, Solanaceae) • Checklist of the Freshwater Fishes of Colombia – J. A. Maldonado-Ocampo, R. P. Vari & J. S. Usma......................143 Anfibios y reptiles en el departamento del Valle del Cauca, Colombia • Peces del Oriente de Antioquia, Colombia • Una nueva especie deLiotyphlops Peters, 1881 (Serpentes, Scolecophidia, Anomalepidae) del sur de la Amazonia Colombiana • Checklist of the Freshwater Fishes of Colombia • Listado de especies espinosas de Solanum L. (Leptostemonum, Solanaceae) – C. I. Orozco, Listado de especies espinosas de Solanum L. (Leptostemonum, Solanaceae) • Anfibios y reptiles en el departamento del Valle del Cauca, Colombia G.