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Phylogenetic Analysis and Evolution
Pl. Syst. Evol. 261: 245–256 (2006) DOI 10.1007/s00606-006-0445-6 A duplication of gcyc predates divergence within tribe Coronanthereae (Gesneriaceae): Phylogenetic analysis and evolution J. F. Smith1, M. M. Funke1, and V. L. Woo2 1Department of Biology, Boise State University, Boise, Idaho USA 2School of Biological Sciences, Victoria University of Wellington, Wellington, New Zealand Received February 8, 2006; accepted March 10, 2006 Published online: September 19, 2006 Ó Springer-Verlag 2006 Abstract. Recent investigations in Gesneriaceae genes (Luo et al. 1996, Almeida et al. 1997, have indicated that the cycloidea homolog, gcyc, Reeves and Olmstead 1998). By studying remains functional at the DNA level and rates of mutant plants of Antirrhinum majus L. (snap- sequence divergence in this gene are not statistically dragon) that lack the wild type floral bilateral different across all taxa regardless of floral symme- symmetry, Luo et al. (1996, 1999) identified two cyc try. A duplication of g has been detected within loci that are essential for the development of Coronanthereae, a tribe that has phylogenetic bilaterally symmetrical flowers. These are cy- affinities to subfamily Gesnerioideae and includes two genera with radially symmetrical corollas. cloidea (cyc) and dichotoma (dich). Both genes Duplication of gcyc has been detected in all are essential for full bilateral symmetry in Coronanthereae except Sarmienta. All paralogs Antirrhinum but the role of cyc is more impor- appear functional at the DNA level. Likewise, tant and acts early in floral development. The there is no increased sequence divergence between developmental aspects of these flower symme- the two copies, nor between species with radially try genes in Antirrhinum have stimulated inter- symmetrical flowers to those with bilateral symme- est in the evolution of plant groups with both try. -
Wednesday Walk — Monga Forest Drive — 28 February 2018
Wednesday Walk — Monga Forest Drive — 28 February 2018 Monga National Park, Dasyurus and Waratah Roads and Penance Grove Circuit and Boardwalk Wednesday Walkers have been visiting Monga National Park for over 15 years since the establishment of the Park in 2001, as a result of the regional forests agreement. It still contains patches of old growth forest dominated by brown barrel, E. fastigata, messmate, E. obliqua, and manna gum, E. viminalis, as well as the ancient plumwood, Eucryphia moorei (Cunoniaceae, coachwoods), that is confined to wet gullies. Other parts of the park are regenerating from past logging that fed a timber mill at Monga. Access to the eastern part of the park on the escarpment is via the Corn Trail that is one of our favourite walks, because of its floriferous heathland understory. Further west a network of old logging trails dissect the park around the catchment of the Mongarlowe River. Our regular haunts here are the Dasyurus Road and picnic ground that leads to the Corn Trail Link across the river, the Waratah Road and Picnic Area, where a riverside track has been constructed to view the waratahs, and the Penance Grove loop track that provides a different access to the boardwalk through groves of massive tree ferns and a plumwood gully. Our first stop was the Dasyurus picnic ground for morning tea and a walk along the roadside. With each visit, the trees are getting taller and some must be getting to the 50m mark. I should borrow a clinometer to measure their true height. Three species dominate: messmate, E. -
Assessing Bird Species Richness Within Shade-Grown Coffee Farms in Chiapas, Mexico / Project ID: 0251711
Assessing Bird Species Richness within Shade-Grown Coffee Farms in Chiapas, Mexico / Project ID: 0251711 Daniel Camilo Thompson Poo, Daniela Valle León, Alberto Martínez Fernández and Jennifer Siobhan Lowry San Cristóbal de las Casas, Chiapas, México. C.P. 29200 / [email protected] 10 July, 2012. Revised December 2014 Assessing Bird Species Richness within Shade-Grown Coffee Farms in Chiapas, Mexico / ID: 0251711 Overall Aim The goal of this project was to identify mechanisms and conservation strategies across agro-forestry systems in the El Triunfo Biosphere Reserve in Chiapas, Mexico. In particular we analyzed key biodiversity, economic, and social components that impact land-use change and ecosystem services in coffee production areas, focusing on how to improve sustainable production and conservation of nature. 2 Assessing Bird Species Richness within Shade-Grown Coffee Farms in Chiapas, Mexico / ID: 0251711 Section 1 Summary The agroforestry systems with coffee at the Sierra Madre of Chiapas, as a part of the Mesoamerican Biological Corridor region, are important for bird species. Agroforestry ecosystems also represent sustainable livelihoods for indigenous groups on the region. Sustainable coffee farming system represents a less human impact on the ecosystem. However, not all coffee producers on the region produce on the same way. Not all the inhabitants are aware of the importance of birds, as a part of the great natural capital of la Sierra Madre, but they either are prepared for the climate change risks and impacts. In this sense, this project seeks to understand, generate and communicate information useful for coffee farmers and their families. The goal is to understand social and economic factors to maintain and increase agroforestry systems with sustainable coffee. -
Chile: a Journey to the End of the World in Search of Temperate Rainforest Giants
Eliot Barden Kew Diploma Course 53 July 2017 Chile: A Journey to the end of the world in search of Temperate Rainforest Giants Valdivian Rainforest at Alerce Andino Author May 2017 1 Eliot Barden Kew Diploma Course 53 July 2017 Table of Contents 1. Title Page 2. Contents 3. Table of Figures/Introduction 4. Introduction Continued 5. Introduction Continued 6. Aims 7. Aims Continued / Itinerary 8. Itinerary Continued / Objective / the Santiago Metropolitan Park 9. The Santiago Metropolitan Park Continued 10. The Santiago Metropolitan Park Continued 11. Jardín Botánico Chagual / Jardin Botanico Nacional, Viña del Mar 12. Jardin Botanico Nacional Viña del Mar Continued 13. Jardin Botanico Nacional Viña del Mar Continued 14. Jardin Botanico Nacional Viña del Mar Continued / La Campana National Park 15. La Campana National Park Continued / Huilo Huilo Biological Reserve Valdivian Temperate Rainforest 16. Huilo Huilo Biological Reserve Valdivian Temperate Rainforest Continued 17. Huilo Huilo Biological Reserve Valdivian Temperate Rainforest Continued 18. Huilo Huilo Biological Reserve Valdivian Temperate Rainforest Continued / Volcano Osorno 19. Volcano Osorno Continued / Vicente Perez Rosales National Park 20. Vicente Perez Rosales National Park Continued / Alerce Andino National Park 21. Alerce Andino National Park Continued 22. Francisco Coloane Marine Park 23. Francisco Coloane Marine Park Continued 24. Francisco Coloane Marine Park Continued / Outcomes 25. Expenditure / Thank you 2 Eliot Barden Kew Diploma Course 53 July 2017 Table of Figures Figure 1.) Valdivian Temperate Rainforest Alerce Andino [Photograph; Author] May (2017) Figure 2. Map of National parks of Chile Figure 3. Map of Chile Figure 4. Santiago Metropolitan Park [Photograph; Author] May (2017) Figure 5. -
Muelleria : an Australian Journal of Botany
Muelleria Volume 5 Number 1 March, 1982 NATIONAL HERBARIUM OF VICTORIA DEPARTMENT OF CROWN LANDS AND SURVEY Muelleria Volume 5, Number 1 March, 1982 CONTENTS Page A revision of the genus Templelonia R.Br. (Papilionaceae) — J. H. Ross 1 The nomenclature of some Australian lichens described as Lecanora and Placodium by Miiller-Argoviensis — R. W. Rogers 31 New Australian species of Nymphoides Seguier (Menyanthaceae) — Helen 1. Aston 35 Vegetation of East Gippsland — S. J. Forbes, N. G. Walsh and P. K. Gullan 53 A new Australian lichen: Cladonia sulcata — A. W. Archer 115 Editor: Helen 1. Aston Published by the National Herbarium of Victoria (MEL). Royal Botanic Gardens, South Yarra, Victoria 3141, Australia. D. M. Churchill, Director and Government Botanist. 43346/81 The date of publication of Volume 4, number 4, was 20 May 1981. A REVISION OF THE GENUS TEMPLETONIA R.Br. (PAPILIONACEAE) by J. H. Ross* ABSTRACT The endemic Australian genus Templetonia is revised. Eleven species are recognized and the uncertainty concerning the application of the name T. sulcata (Meissn.) Benth. is discussed. This discussion includes the selection ol a lectotype for Bossiaea rossii F. Muell., a possible synonym. Descriptions, a key to the identification of species, illustrations, and distribution maps are provided, together with notes on ecology and relationships. Two previous papers describing T. incana (.Muelleria 4: 247-249 (1980)) and T. negketa (loc. cit. 390-393 (1981)) should be used in conjunction with the present revision. INTRODUCTION Templetonia, a small genus of 1 1 species described by R. Brown in Ait. f Hort. , Kew. ed. 2, 4: 269 (1812), was named in honour of the Irish botanist John Templeton (1776-1825) ot Orange Grove, Belfast. -
Temporal and Spatial Origin of Gesneriaceae in the New World Inferred from Plastid DNA Sequences
bs_bs_banner Botanical Journal of the Linnean Society, 2013, 171, 61–79. With 3 figures Temporal and spatial origin of Gesneriaceae in the New World inferred from plastid DNA sequences MATHIEU PERRET1*, ALAIN CHAUTEMS1, ANDRÉA ONOFRE DE ARAUJO2 and NICOLAS SALAMIN3,4 1Conservatoire et Jardin botaniques de la Ville de Genève, Ch. de l’Impératrice 1, CH-1292 Chambésy, Switzerland 2Centro de Ciências Naturais e Humanas, Universidade Federal do ABC, Rua Santa Adélia, 166, Bairro Bangu, Santo André, Brazil 3Department of Ecology and Evolution, University of Lausanne, CH-1015 Lausanne, Switzerland 4Swiss Institute of Bioinformatics, Quartier Sorge, CH-1015 Lausanne, Switzerland Received 15 December 2011; revised 3 July 2012; accepted for publication 18 August 2012 Gesneriaceae are represented in the New World (NW) by a major clade (c. 1000 species) currently recognized as subfamily Gesnerioideae. Radiation of this group occurred in all biomes of tropical America and was accompanied by extensive phenotypic and ecological diversification. Here we performed phylogenetic analyses using DNA sequences from three plastid loci to reconstruct the evolutionary history of Gesnerioideae and to investigate its relationship with other lineages of Gesneriaceae and Lamiales. Our molecular data confirm the inclusion of the South Pacific Coronanthereae and the Old World (OW) monotypic genus Titanotrichum in Gesnerioideae and the sister-group relationship of this subfamily to the rest of the OW Gesneriaceae. Calceolariaceae and the NW genera Peltanthera and Sanango appeared successively sister to Gesneriaceae, whereas Cubitanthus, which has been previously assigned to Gesneriaceae, is shown to be related to Linderniaceae. Based on molecular dating and biogeographical reconstruction analyses, we suggest that ancestors of Gesneriaceae originated in South America during the Late Cretaceous. -
Temperate and Tropical Podocarps: How Ecologically Alike Are They? David A
7 Temperate and Tropical Podocarps: How Ecologically Alike Are They? David A. Coomes and Peter J. Bellingham ABSTRACT. With few exceptions, podocarps are specialists of nutrient-poor soils within temperate and tropical rainforests. They are locally abundant in some tropical mountains, especially near the tree line, and in the lowland tropics most are confined to heathlands and impoverished habitats, although some can persist in forest understories. The ecology of tropical podocarps is not well understood, so here we draw on literature from temperate regions to help characterize their niches. Temperate podocarps are ef- fective at capturing and retaining nutrients at the expense of competitors. They are uni- versally slow growing, but this is not necessarily an encumbrance on poor soils because competition for light is relatively weak. Temperate podocarps are often outcompeted on richer soils because several factors stack against them: they are ill equipped to compete with angiosperms in the race to occupy canopy gaps, there may be few sites for their establishment on the forest floors, and continuous regeneration by podocarps is seldom found in the forest understory because their growth is severely hampered by shading. We suggest that competition excludes imbricate- leaved podocarps from most lowland tropi- cal forests, whereas broad- leaved species with anastomosing veins (Nageia and some Podocarpus) are so shade tolerant that they regenerate beneath closed canopies. INTRODUCTION In 1989, Bond revisited an old but unresolved question: why were coni- David A. Coomes, Forest Conservation and fers pushed out of the lowland tropics and mesic temperate regions by angio- Ecology Group, Department of Plant Sciences, sperms as they diversified and expanded in range during the Late Cretaceous? University of Cambridge, Cambridge CB2 3EA, UK. -
Towards Resolving Lamiales Relationships
Schäferhoff et al. BMC Evolutionary Biology 2010, 10:352 http://www.biomedcentral.com/1471-2148/10/352 RESEARCH ARTICLE Open Access Towards resolving Lamiales relationships: insights from rapidly evolving chloroplast sequences Bastian Schäferhoff1*, Andreas Fleischmann2, Eberhard Fischer3, Dirk C Albach4, Thomas Borsch5, Günther Heubl2, Kai F Müller1 Abstract Background: In the large angiosperm order Lamiales, a diverse array of highly specialized life strategies such as carnivory, parasitism, epiphytism, and desiccation tolerance occur, and some lineages possess drastically accelerated DNA substitutional rates or miniaturized genomes. However, understanding the evolution of these phenomena in the order, and clarifying borders of and relationships among lamialean families, has been hindered by largely unresolved trees in the past. Results: Our analysis of the rapidly evolving trnK/matK, trnL-F and rps16 chloroplast regions enabled us to infer more precise phylogenetic hypotheses for the Lamiales. Relationships among the nine first-branching families in the Lamiales tree are now resolved with very strong support. Subsequent to Plocospermataceae, a clade consisting of Carlemanniaceae plus Oleaceae branches, followed by Tetrachondraceae and a newly inferred clade composed of Gesneriaceae plus Calceolariaceae, which is also supported by morphological characters. Plantaginaceae (incl. Gratioleae) and Scrophulariaceae are well separated in the backbone grade; Lamiaceae and Verbenaceae appear in distant clades, while the recently described Linderniaceae are confirmed to be monophyletic and in an isolated position. Conclusions: Confidence about deep nodes of the Lamiales tree is an important step towards understanding the evolutionary diversification of a major clade of flowering plants. The degree of resolution obtained here now provides a first opportunity to discuss the evolution of morphological and biochemical traits in Lamiales. -
Plant Life of Western Australia
INTRODUCTION The characteristic features of the vegetation of Australia I. General Physiography At present the animals and plants of Australia are isolated from the rest of the world, except by way of the Torres Straits to New Guinea and southeast Asia. Even here adverse climatic conditions restrict or make it impossible for migration. Over a long period this isolation has meant that even what was common to the floras of the southern Asiatic Archipelago and Australia has become restricted to small areas. This resulted in an ever increasing divergence. As a consequence, Australia is a true island continent, with its own peculiar flora and fauna. As in southern Africa, Australia is largely an extensive plateau, although at a lower elevation. As in Africa too, the plateau increases gradually in height towards the east, culminating in a high ridge from which the land then drops steeply to a narrow coastal plain crossed by short rivers. On the west coast the plateau is only 00-00 m in height but there is usually an abrupt descent to the narrow coastal region. The plateau drops towards the center, and the major rivers flow into this depression. Fed from the high eastern margin of the plateau, these rivers run through low rainfall areas to the sea. While the tropical northern region is characterized by a wet summer and dry win- ter, the actual amount of rain is determined by additional factors. On the mountainous east coast the rainfall is high, while it diminishes with surprising rapidity towards the interior. Thus in New South Wales, the yearly rainfall at the edge of the plateau and the adjacent coast often reaches over 100 cm. -
This Thesis Has Been Submitted in Fulfilment of the Requirements for a Postgraduate Degree (E.G
This thesis has been submitted in fulfilment of the requirements for a postgraduate degree (e.g. PhD, MPhil, DClinPsychol) at the University of Edinburgh. Please note the following terms and conditions of use: This work is protected by copyright and other intellectual property rights, which are retained by the thesis author, unless otherwise stated. A copy can be downloaded for personal non-commercial research or study, without prior permission or charge. This thesis cannot be reproduced or quoted extensively from without first obtaining permission in writing from the author. The content must not be changed in any way or sold commercially in any format or medium without the formal permission of the author. When referring to this work, full bibliographic details including the author, title, awarding institution and date of the thesis must be given. Molecular Species Delimitation, Taxonomy and Biogeography of Sri Lankan Gesneriaceae Subhani Wathsala Ranasinghe Doctor of Philosophy The University of Edinburgh Royal Botanic Garden Edinburgh 2017 Declaration I hereby declare that the work contained in this thesis is my own unless otherwise acknowledged and cited. This thesis has not in whole or in part been previously presented for any degree Subhani Wathsala Ranasinghe 24th January 2017. i Abstract The plant family Gesneriaceae is represented in Sri Lanka by six genera: Aeschynanthus, Epithema, Championia, Henckelia, Rhynchoglossum and Rhynchotechum, with 13 species (plus one subspecies/variety) of which ten are endemic including the monotypic genus Championia, according to the last revision in 1981. They are exclusively distributed in undisturbed habitats, and some have high ornamental value. The species are morphologically diverse, but face a problem of taxonomic delineation, which is further complicated by the presence of putative hybrids. -
Riqueza, Composición Florística Y Distribución De Las Epífitas Vasculares De La Reserva Ecológica “Sierra De Otontepec”, Veracruz
UNIVERSIDAD VERACRUZANA FACULTAD DE CIENCIAS BIOLÓGICAS Y AGROPECUARIAS Región Poza Rica Tuxpan MAESTRÍA EN CIENCIAS DEL AMBIENTE Riqueza, composición florística y distribución de las epífitas vasculares de la Reserva Ecológica “Sierra de Otontepec”, Veracruz Que para obtener el título de Maestra en Ciencias del Ambiente Presenta Biól. Elia Reyna Pérez Lugo Director de Tesis: Dr. José Luis Alanís Méndez Co-Director de Tesis: Dr. Thorsten Krömer Asesor de Tesis: Rodrigo de Andrade Kersten Tuxpan, Ver. Enero 2016 i i AGRADECIMIENTOS A la Facultad de Ciencias Biológicas y Agropecuarias Región Poza Rica Tuxpan, por darme la oportunidad de formar parte de sus alumnos de posgrado y a su cuerpo académico que participo en mi formación profesional. Al CONACyT por proporcionar el financiamiento para la ejecución de este proyecto. A la fundación Pedro y Elena, a la Asociación Regional de Silvicultores de la Sierra de Otontepec y al Dr. Jorge Luis Chagoya, quienes facilitaron mi estancia en la reserva durante el trabajo de campo. A los colaboradores del Herbario de CITRO; Dra. Amparo Acebey, Mtro. Cesar, Mtra. Daniela, quienes ayudaron en la identificación taxonómica de epífitas. A la Pontificia Universidad Católica de Paraná, por facilitar mi estancia académica en su institución. A la madre naturaleza, por permitirme la vida y por proporcionarme los medios para que realice mis sueños. A mi madre y mis hermanas que han sido una parte fundamental en el logro de mis metas, apoyándome económicamente y emocionalmente en todo momento. A todas las personas que han colaborado ya sea como asesores o revisores de este proyecto; Dr. Alanís, Dr. -
Palinotaxonomia De Espécies Brasileiras De Gesneriaceae, Com Ênfase Nas Ocorrentes No Estado De São Paulo
EDUARDO CUSTÓDIO GASPARINO Palinotaxonomia de espécies brasileiras de Gesneriaceae, com ênfase nas ocorrentes no Estado de São Paulo Tese apresentada ao Instituto de Botânica da Secretaria do Meio Ambiente, como parte dos requisitos exigidos para a obtenção do título de DOUTOR em BIODIVERSIDADE VEGETAL E MEIO AMBIENTE, na Área de Concentração de Plantas Vasculares em Análises Ambientais. SÃO PAULO 2008 EDUARDO CUSTÓDIO GASPARINO Palinotaxonomia de espécies brasileiras de Gesneriaceae, com ênfase nas ocorrentes no Estado de São Paulo Tese apresentada ao Instituto de Botânica da Secretaria do Meio Ambiente, como parte dos requisitos exigidos para a obtenção do título de DOUTOR em BIODIVERSIDADE VEGETAL E MEIO AMBIENTE, na Área de Concentração de Plantas Vasculares em Análises Ambientais. ORIENTADORA: DRA. MARIA AMÉLIA VITORINO DA CRUZ-BARROS CO-ORIENTADOR: DR. ALAIN CHAUTEMS Ficha Catalográfica elaborada pela Seção de Biblioteca do Instituto de Botânica Gasparino, Eduardo Custódio G249p Palinotaxonomia de espécies brasileiras de Gesneriaceae, com ênfase nas ocorrentes no Estado de São Paulo / Eduardo Custódio Gasparino -- São Paulo, 2008. 197 p.il. Tese (Doutorado) -- Instituto de Botânica da Secretaria de Estado do Meio Ambiente, 2008 Bibliografia. 1. Pólen. 2. Palinotaxonomia. 3. Gesneriaceae. I. Título CDU : 581.33 Alfa, Ômega... princípio e fim, sim Ele é... sim Ele é.... Lírio dos vales, estrela da manhã, para sempre cantarei o Seu amor!!! À Ele a glória, À Ele o louvor, à Ele o domínio... Ele é o Senhor Aos meus pais, Luzia Custódia Pereira Gasparino e Francisco Gasparino, dedico. À minha Orientadora Dra. Maria Amélia Obrigado por todos os ensinamentos, pela amizade, dedicação e pela orientação de todos estes anos e em especial nesta Tese.