CBBI Seminar Schedule 2011-2012

Total Page:16

File Type:pdf, Size:1020Kb

CBBI Seminar Schedule 2011-2012 Chemistry-Biochemistry-Biology Interface Seminar Schedule 2011-2012 (Thursdays, 2:00-3:00 pm) Date Moderator/ Speaker 1 Speaker 2 Refreshments September 2 CBBI Fall Social, 5:00 pm, Stepan lobby September 8 Michelle Favila & Career Paths: Postdoctoral Forum 4:00 pm Jordan Scott/ Francis Insaidoo (Columbia University) 131 DeBartolo Amanda Hummon (University of Notre Dame) Shaun Lee (University of Notre Dame) Peter O’Daniel (I.P. Callison) Pamela Tamez (University of Notre Dame) September 15 Mary Ann McDowell Bryan Smith (biochemistry, Smith) 184 NSH Mary Cloutier September 22 Patricia Clark/ Katherine Ward Richard Kurker (biochemistry, 184 NSH Joshua Lee (biochemistry, Stahelin) Dubois) October 6 Robert Stahelin/ Katherine Byrd (chemistry, Kerry Bauer (biochemistry, 184 NSH Cheng Ji Helquist) Hummon) October 27 Jed Fisher/ James Reilly, Indiana University 184 NSH Brandon Haines New Protein Analysis Methods and Their Application to Bacterial Proteomics November 10 Shahriar Mobashery/ Kevin Young, Department of Microbiology and Immunology, I84 NSH Michelle Favila University of Arkansas for Medical Sciences Twists and Turns: Penicillin Binding Proteins, Cell Division, and the Shape of E. coli November 24 No Meeting, Thanksgiving December 8 Michelle Favila/ Career Paths: Karen Deak, University of Notre Dame 184 NSH Richard Kurker No More Pipetting! December 22 No Meeting, Holiday Break January 5 January 12 Olaf Wiest/ Jill Bouchard (biochemistry, Brandon Haines (chemistry, Wiest) 184 NSH Kerry Bauer Peng) January 19 Shahriar Mobashery María del Mar Tavío Pérez, Department of Clinical Microbiology, 283 Galvin Universidad de las Palmas de Gran Canaria, Spain Microbe-Microbe Communication (Quorum Sensing) as Target for Antibacterial Chemotherapy February 2 Shaun Lee/ Emmanuel Adu-Gyamfi (biochemistry, Stahelin) 283 Galvin Jill Bouchard Investigation of Ebola Virus Assembly Using Fluorescence Dynamics - What I Learned From My Summer Internship February 9 Julia Philip & Bryan Research Internship Forum Galvin 283 Smith/ Katherine Michelle Favila, Julia Philip, Jordan Scott, Bryan Smith Byrd February 16 Jesus Izaguirre/ Major Gooyit (chemistry, Chang & Mobashery) Galvin 283 Jenny Starner Gelatinase Inhibition as a Therapeutic Approach for Treatment of Neurological Diseases February 23 Kyle Watson & Career Paths: Industry-Academia Forum 4:00 pm Marcus Arieno Mayland Chang, Jed Fisher, Garrett Moraski, Jeff Peng 123 NSH February 29 Shahriar Mobashery/ Julian Davies, University of British Columbia 4:00 pm Major Gooyit 283 Galvin March 1 Shahriar Mobashery/ Yu Chen, University of South Florida Galvin 283 Doug Rice March 15 Mayland Chang/ Career Paths: Zhiyang Zhao, Amgen Galvin 283 Roles of DMPK in Drug Discovery and Development March 29 Marv Miller & CBBI Faculty Meeting Mayland Chang April 12 Marv Miller & CBBI Fellowship Application Meeting Mayland Chang/ Katherine Ward April 26 Brad Smith/ Robert Bonomo, Case Western Reserve University May 16-17 CBBI Symposium, Gregory Petsko, Brandeis University Jordan May 24 Holly Goodson/ Cheng Ji, (chemistry, Miller) June 7 Career Paths: John Ogden, Roche June 21 July 5 July 19 July 26 CBBI Summer Undergraduate Research Program Presentations August 2 CBBI Summer Undergraduate Research Program Presentations August 16 Yearly Evaluation and Organizational Faculty Meeting .
Recommended publications
  • ASB M B Annual Meeting Highlights from the 2009
    2010 ANNUAL MEETING, APRIL 24-28. ANAHEIM AWAITS! hlights fr ig om H June 2009 t h e 2 0 0 9 A S B M B A n n u al Meeting American Society for Biochemistry and Molecular Biology ANNUAL REVIEWS A Nonprofit Scientific Publisher INSIGHTFUL ANNUAL REVIEW OF TABLE OF CONTENTS BIOCHEMISTRY Without a License, or Accidents Waiting to Happen, E. Peter Geiduschek RESEARCH IN • A Journey in the World of DNA Rings and Beyond, James C. Wang BIOCHEMISTRY Vol. 78 • JUlY 2009 • The Biochemistry of Disease: Desperately Seeking Syzygy, John W. Kozarich • Biosynthesis of Phosphonic and Phosphinic Acid Natural STARTS WITH Editor: Products, William W. Metcalf, Wilfred A. van der Donk • New Antivirals and Drug Resistance, Peter M. Colman • Multidrug Resistance in Bacteria, Roger D. Kornberg ANNUAL Hiroshi Nikaido • Conformational Pathology of the Serpins: Themes, REVIEWS Stanford University School Variations, and Therapeutic Strategies, Bibek Gooptu, David A. Lomas of Medicine • Getting a Grip on Prions: Oligomers, Amyloids, and Pathological Membrane Interactions, Byron Caughey, Gerald S. Baron, Bruce Chesebro, Annual Review of Martin Jeffrey • RING Domain E3 Ubiquitin Ligases, Raymond J. Deshaies, Biochemistry, in publication Claudio A.P. Joazeiro • Regulation and Cellular Roles of Ubiquitin- since 1932, sets the standard Specific Deubiquitinating Enzymes, Francisca E. Reyes-Turcu, Karen H. Ventii, Keith D. Wilkinson • Recognition and Processing of Ubiquitin- for review articles in biological Protein Conjugates by the Proteasome, Daniel Finley • Degradation of chemistry and molecular biology. Activated Protein Kinases by Ubiquitination, Zhimin Lu, Tony Hunter • The Since its inception, these volumes Role of Ubiquitin in the NFκB Regulatory Pathways, Brian Skaug, Xiaomo have served as an indispensable Jiang, Zhijian J.
    [Show full text]
  • Pages 459 To
    459 University Organization Board of Trustees The dean of the Heller School for Social study abroad, international students and Policy and Management oversees the scholars, and student enrichment services), academic activities of the school and its Hiatt Career Center, research and planning, Under Massachusetts law, the Board of work in such policy areas as children, and student life (including athletics, Trustees is the governing body of the youth, families, health, mental health, chaplaincy, community service, health university. There are four faculty substance abuse, disabilities, aging, social services, intercultural center, judicial representatives and three student change, and economic inequalities. orientation, psychological counseling, representatives to the board who participate residence life, and student activities). in board meetings and have votes on the The dean of the Brandeis International several committees. The president of the Business School oversees the academic, The senior vice president for university, the chair of the Fellows, the professional, and development activities communications administers and executes president of the Brandeis National of the university’s second professional critical university-wide internal and Committee, and the president of the school. Research areas of the school external communications, overseeing the Alumni Association serve ex officio. The include economic policy, finance, global communications emergency response plan board annually elects an alumni term entrepreneurship, international business, and directing all crisis communications. trustee who serves a four-year term with regional economics integration, and trade Further, she is responsible for an integrated full voting privileges. and exports. marketing communications program that highlights Brandeis’s research The President accomplishments, academic excellence, The president, the chief executive officer of The Faculty Senate social justice mission, and scholarly the university, is appointed by the Board of contributions to the Jewish community.
    [Show full text]
  • 2014-Program-For-Lecture-Gregory
    OKLAHOMA SCHOOL OF SCIENCE AND MATHEMATICS Oklahoma stands out among other states in our dedication to providing OSSM an outstanding science and mathematics education to its gifted students at a time when our nation falls behind other countries in these areas. Senator Penny Williams Distinguished Lecture Series With just 22 classes graduated, OSSM alumni/alumnae are already Presents bringing substantial benefits to our state as they complete their degrees and move into their professions. “How Parkinson’s Disease Starts and •••••••••••••••••••••••• How It Might Be Stopped” • Eighty-five percent of OSSM alumni are remaining in scientific, technology, By engineering, and mathematics (STEM) fields for their careers! 2014 Capra Scholar • Of OSSM graduates now employed (many are still in undergraduate and graduate school or completing residencies in medical school), more than 60% GreGory A. PetSko, D.PHIl. are employed in Oklahoma. The fields of study and careers most chosen by OSSM graduates are engineering Arthur J. Mahon Professor of Neurology and Neuroscience and • Director, Helen and Robert Appel Alzheimer’s Disease Research Institute Weill Cornell Medical College (aerospace, biomedical, chemical, civil, computer, electrical, mechanical, Adjunct Professor of Biomedical Engineering Cornell University petroleum); medicine, medical research, and other health sciences; and other fields including computer science, technology, education, scientific research, Gyula and Katica Tauber Professor of Biochemistry and Chemistry, Emeritus Brandeis University business, and law. Adjunct Professor of Neurology Harvard Medical School Many OSSM alums are employed in many of Oklahoma’s finest corporations, Past-President, American Society for Biochemistry and Molecular Biology • President, International Union of Biochemistry and Molecular Biology hospitals and technical firms such as AT&T, Artificial Lift Company, Baptist Hospital, Benham Companies, Boeing, Chesapeake Energy, C.
    [Show full text]
  • Biophysical Society 58Th Annual Meeting February 15–19, 2014 | San Francisco, California
    ABSTRACT DEADLINE: OCTOBER 1, 2013 | EARLY REGISTRATION DEADLINE: JANUARY 8, 2014 Biophysical Society 58th Annual Meeting FEBRUARY 15–19, 2014 | SAN FRANCISCO, CALIFORNIA BIOPHYSICS OF CELL DIVISION AND National Lecturer SPATIAL RELATIONSHIPS Workshops Susan Biggins, Fred Hutchinson Cancer Workshops will be held on Sunday and Carlos Bustamante Research Center, Co-Chair Tuesday evenings. University of California, Berkeley Wallace Marshall, University of California, San Francisco, Co-Chair POLARIZABLE FORCE FIELDS FROM Daniel Fletcher, University of California, BIOMOLECULAR SIMULATIONS A Journey Through Cellular Processes: Berkeley One Molecule at a Time Matthieu Piel, Curie Institute, France Benoit Roux, University of Chicago, Co-Chair Alexander Mackerell, University FORCE GENERATION IN CELL AND of Maryland, Co-Chair TISSUE NETWORKS Vijay Pande, Stanford University Michael Sheetz, Columbia University, MOLECULAR BASIS FOR REGULATION Teresa Head-Gordon, University Co-Chair Symposia 2+ of California, Berkeley OF CA CHANNELS Clare Waterman, NHLBI, Co-Chair Stephen Long, Memorial Sloan- Symposia will be held Sunday through Alexander Bershadsky, Weizmann Kettering Cancer Center, Co-Chair SINGLE MOLECULE DYNAMICS USING Wednesday. Institute of Science, Israel FRET/LRET Amy Lee, University of Iowa, Co-Chair Frank Jülicher, Max Planck Institute for the Achillefs Kapanidis, University of Annette Dolphin, University College Physics of Complex Systems, Germany FORCE SENSING IN MUSCLE London, United Kingdom Oxford, United Kingdom, Co-Chair Mathias Gautel,
    [Show full text]
  • Experimentally Demonstrated the Intrinsic Instability of the Fluorite-Type Zr Cation Network
    0246110 Rta(i) 1 1,2 l,4 1,6 1,l 2 22 Rta(i) Figure 2. Temperature dependence of Zr-FTfor pure orthorhombic zirconia Figure 3 Temperature dependence of Zr-0 shell in tetragonal zirconia solid solution Our study has experimentally demonstrated the intrinsic instability of the fluorite-type Zr cation network. Coherent scattering beween Conclusions central Zr ion and distant cations is weaker and vibration modes of the Zr-cation network are It is found that, for all of zirconia solid softer in tetragonal zirconia than in monoclmic, solutions studied, the dopant-oxygen distances are orthorhombic, or stabilized cubic zirconia. In si@icantly ddferent from the Zr-0 distances. addition, the outer foux oxygens in the 8-fold The dopant-cation distances, on the other hand, coordinated Zr-0 polyhedron are only loosely are usually very close to the Zr-Zr distance, solutions. A bonded and are subject to very large static and confirming the formation of solid dynamic distortions. This effect is illustrated by general structural picture for zirconia solid the expanded portion of the Fourier transform solutions is one that places the dopant cations shown in Figure 3. randomly on tbe Zr sites in the cation network, but with distorted and sometimes very different Dopant Structure dopant-oxygen polyhedra surrounding these dopants. In the case of Ge4+ doping and Y-Nb We have also successfully performed co-doping, short-rangecation ordering has been EXAFS experiments at the dopant absorption suggested from our EXAFS results. edges for doped zirconia solid solutions. Dopants Based on the above structural information studied include the Ce-,Nb-, and Y-K edges as and other EXAFS results obtained from NSLS, well as Ce-LIn edge.
    [Show full text]
  • Cell Biology in Sudan
    See discussions, stats, and author profiles for this publication at: https://www.researchgate.net/publication/290440842 Science on the Banks of the Nile: Cell Biology in Sudan Article · September 2014 READS 162 4 authors, including: Marmar A. El Siddig Adil Ali EL Hussein University of Khartoum University of Khartoum 40 PUBLICATIONS 25 CITATIONS 44 PUBLICATIONS 67 CITATIONS SEE PROFILE SEE PROFILE Sakina Yagi University of Khartoum 36 PUBLICATIONS 174 CITATIONS SEE PROFILE Available from: Marmar A. El Siddig Retrieved on: 17 May 2016 ASCB MARCH 2014 NEWSLETTER VOLUME 37, NUMBER 2 The ASCB in 2018 Page 3 ASCB Task Force to Explore Annual Meeting Reproducibility of Scientific Data Highlights The apparent irreproducibility of some published scientific Page 9 results is an issue of growing concern to industry and to the scientific community. It has begun to receive attention in the news media as well, and if one believes the popular press as MBoC Call for Papers much as 80% of scientific research cannot be reproduced. Is in Quantitative that really true? Does that apply to all research or just some Biology areas? These are just two of the questions a task force of the Page 36 ASCB’s Public Policy Committee (PPC) will attempt to answer as it conducts an in-depth analysis of the issue. If reports of widespread difficulty in reproducing published Inside research results are true, it is a problem that could threaten the scientific enterprise and undermine the authority of the COMPASS Outreach Awards 2 scientific community. In his charge to the task force, ASCB Executive Director’s Column 3 Executive Director Stefano Bertuzzi listed four potential causes for difficulties in reproducing results: DORA Panel Discussion 9 n A hyper-competitive culture that overemphasizes results BSCB Young Cell Biologist 10 n A bias in favor of positive results Young French Cell Biologists 11 Reproducibility, continued on p.17 Mark Winey Local Meeting Highlights 12 Nominate a Colleague for an ASCB Award! Deadline April 1.
    [Show full text]
  • IUBMB Newsletter Issue 2.Pdf
    IUBMB NEWS Issue 2 October 2016 President’s Message IUBMB aims to promote research and education in In This Issue Biochemistry and Molecular Biology. In this regard, over the President’s Message years we have channelled great efforts into the research aspects of our science. We now consider it timely to turn our Report on the 16th IUBMB attention to educational initiatives. Conference / Young To address this aim and in collaboration with FEBS, we are organising a conference on Education in Biochemistry and Molecular Biology, to be held in Scientists’ Program Rehovot (Israel) in September 2017. The conference seeks to provide a think-tank Tang Prize Foundation setting in which to draw up ideas to improve the current approach to teaching these subjects, and to generate a series of recommendations to be shared with Awardees / IUBMB Travel the educational community. In this regard, this conference will serve to propel the Fellowships changes that are required to bring education in biochemistry and molecular biology st at all levels into the 21 century. Another Way to Think About Another important aspect of education is to provide young scientists from Disease by Gregory Petsko developing countries the opportunity to attend international congresses and meetings. IUBMB is firmly committed to this endeavour and devotes significant Retrospective — financial resources to this end. Given that the number of applications from African countries is very low, I wish to encourage our young African colleagues to apply Osamu Hayaishi and benefit from IUBMB travel awards and Wood-Whelan fellowships. An Appreciation — IUBMB is also launching a new activity, namely Focused Meetings.
    [Show full text]
  • FALL2015.Pdf
    Introducing… In Meso In Situ Serial Crystallography mitegen.com/imisx Easy Crystallizaon in LCP • Simple in situ X-ray Diffracon • Standard Goniometer Compable • Serial Crystallography Enabling • Advanced Dual-Sandwich Design Rethink what your LCP crystallizaon plate is capable of. EZ-Cut LCP LCP Tools Easy Access LCP Crystallizaon Plate Starter Kits, Syringes, Lipids & More Take your crystallizaon in LCP to the next level with MiTeGen’s new LCP line mitegen.com/lcp ACA - Structure Matters www.AmerCrystalAssn.org Table of Contents 2 President’s Column 2-4 News from Canada 4 From the Editor's Desk 5-6 Update on Structural Dynamics Chris Cahill 7 What's on the Cover ACA President 8-11 Poster Prizes in Philadelphia 12 Undergraduate Student Reception in Philadelphia Contributors to this Issue What's on the Cover 13-51 Philadelphia ACA Meeting Page 7 21 Index of Advertisers 53-54 2015 ACA Summer Course 56 What's New on the ACA History Website Spotlight on Stamps Juanma García-Ruiz Net RefleXions 15 Plenary Lecturer in Philadelphia 58-59 Puzzle Corner 59 YSSIG Activities 60-61 48th Erice International School of Crystallography 61-62 Updates from 2014-2015 AIP Science & Technology Fellows 62 CSD50 Symposium Daniel Rabinovich 64-65 News & Awards Spotlight on Stamps 65-66 Book Reviews 66-67 2015 Wisconsin Crystal-Growing Competition 68 Net RefleXions 69 CCDC Data Deposition Service Enhancement 70-71 ACA 2016 Denver Preview 72 Future Meetings Anastasiya Vinokur Net RefleXions Contributions to ACA RefleXions may be sent to either of the Editors: Please address matters pertaining to advertisements, membership Judith L.
    [Show full text]
  • Democritus Universtity of Thrace Department of Molecular Biology and Genetics Undergraduate Prospectus 2009-2010
    DEMOCRITUS UNIVERSTITY OF THRACE DEPARTMENT OF MOLECULAR BIOLOGY AND GENETICS UNDERGRADUATE PROSPECTUS 2009-2010 ALEXANDROUPOLIS ENTRY 2009 i Turkey Thessaloniki MBG Alexandroupolis Nea Chili Makri Department of Medicine MBG University Hospital Nea Chili ADDRESS Democritus University of Thrace Department of Molecular Biology and Genetics, 6th km Alexandroupolis-Makris University Campus, Dragana, GR. 68100 WEBSITE www.mbg.duth.gr INFORMATION Τel: (+30)25510/30610, 30612,30614 FAX: (+30) 25510/30613 The prospectus was organized by Dr C.Staneloudi and M.Grigoriou, Assistant Professor ii CONTENTS ACADEMIC DIARY 2009-2010………………………..…………………………………………………..v A Preface By The President…………………………………………………………………………………vi PART Ι: GENERAL INFORMATION.…………………………………………………………………...1 DEMOCRITUS UNIVERSITY OF THRACE (D.U.TH)………………………………………………....2 1. The University………………………………………………………………………………….....2 2. Administration………………………………………………………………………………….....3 THE DEPARTMENT OF MOLECULAR BIOLOGY AND GENETICS (M.B.G)……………………..4 1. The Department…………………………………………………………………………………...4 2. Administration and Teaching Staff…………………………………………………………….....5 3. Divisions………………………………………………………………..........................................6 4. Admission ………………………….....................................................................………………..7 PART ΙI: STUDYING IN M.B.G……………………………………………………………............……..8 1. Rules and Regulations of Exams and Evaluation……………………............................................9 2. Requirements for Graduation………………………………………..................…………………9
    [Show full text]
  • Program for the 36Th
    · University of Wisconsin, Madison, Wisconr~ d~ 36th National Organic Chemistry Symposium June 13 -17,1999 University of Wisconsin Madison, Wisconsin Table of Contents Program ........................................................................................................ ii Symposium Organizers and Divisional Officers ......................................... vi ACS Organic Division Graduate Fellows and Sponsors ............................ vii Roger Adams Award ............. __ ...................................................................... x Campus Map ................................................................................................ xi Memorial Union Floor Layout ................................................................... xii Lecture Abstracts Elias J. Corey .................................................................................... 1. Sheila De "Witt ..................................................................................... 7 Gregory Fu ...................................................................................... 15 Samuel Gellman ............................................................................... 20 Robert Grubbs ................................................................................. 25 Chaitan Kholsa ................................................................................ 32 Dieter Seebach ................................................................................. 36 Jeffrey Moore ..................................................................................
    [Show full text]
  • Xin Sun 56 Gardener Street Apt 8, Allston, MA 02134 Phone: 781-296-7882 (Cell) Email: [email protected]
    Xin Sun 56 Gardener Street Apt 8, Allston, MA 02134 Phone: 781-296-7882 (Cell) Email: [email protected] EDUCATION Brandeis University, Waltham, MA, 2005 – 2011 Ph.D. in Biochemistry Advisor: Lizbeth Hedstrom University of California, Berkeley, Berkeley, CA, 2001 - 2005 B.A. in Molecular and Cell Biology, Division of Biochemistry and Molecular Biology RESEARCH SUMMARY Boston University, Boston, MA, 2011 – present Moenomycin A (MmA) is the prototypical phosphoglycolipid antibiotic produced by Streptomyces spp. and is the only known active site inhibitor of the peptidoglycan glycosyltransferases (PGT) , the bacterial cell wall sugar polymerases. A mechanistically intriguing methylation of an sp3-hybridized carbon occurs during MmA biosynthesis; this reaction is catalyzed by MoeK5, a cobalamin radical-SAM methyltransferase, but the mechanism is not understood. My work has focused on the expression, purification, and reconstitution of MoeK5 with its two complex metal cofactors, methylcobalamin and an iron-sulfur cluster. Furthermore, biochemical analysis of MmA production demonstrates that methylation occurs early in the MmA biosynthetic pathway. Using MmA biosynthetic enzymes, I have chemo-enzymatically synthesized the likely MoeK5 sugar-lipid substrate. I am currently poised to carry out a detailed mechanistic study of this elusive class of enzymes. Brandeis University, Waltham, MA, 2005 – 2011 Cryptosporidium parvum is a eukaryotic, disease causing human pathogen for which there are no vaccines or drugs available. Genomic analysis suggests the parasite is almost entirely dependent on salvage pathways for the synthesis of metabolites. In my research, I enzymatically characterized one of the parasite’s pyrimidine salvage enzymes, thymidine kinase, and assessed its role both as a potential drug target and in the activation of prodrugs.
    [Show full text]
  • Conference Program March 5-6, 2014
    Conference Program March 5-6, 2014 Hunter College Undergraduate Research Conference March 5-6, 2014 ________________________________________________ Welcome from the Provost p. 3 Conference Schedule p. 5 Conference Map p. 6 Social Networking p. 7 Keynote p. 8 Panel Tips from Faculty: Professionalism & Self-Presentation p. 10 Lunches Welcome & Lunch: Preparing for and Thriving in Graduate School p. 13 Career Lunch: What You Can Do with a Science Degree p. 15 Fairs Research Opportunities & Programs Fair p. 18 Graduate & Professional Schools Fair p. 19 Awards and Recognition p. 20 Acknowledgements p. 22 Please see Proceedings for list of posters and oral presentations ________________________________________________ 2 Welcome from Provost Rabinowitz As Hunter’s Provost and Vice President for Academic Affairs, I am delighted to welcome you to Hunter College’s second annual Undergraduate Research Conference. The conference is a celebration of Hunter’s undergraduates and the faculty who mentor their research, scholarship and creative endeavors. Over the last decade, an increasing number of public and private colleges and universities have expanded research opportunities for undergraduates - and for good reason. Faculty know all too well that classroom teaching is only part of what students need to succeed. Mentoring outside the classroom - especially mentoring provided as part of a collaboration to examine, create and share new knowledge or creative works - can make all the difference in helping undergraduates develop the skills and knowledge they need to succeed in college and beyond. Research experiences and one-on-one support, mentoring and advising from Hunter's exceptional faculty can have a transformative effect on students' professional and personal lives.
    [Show full text]