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Mycodiversity Studies in Selected Ecosystems of Greece: 5
Uploaded — May 2011 [Link page — MYCOTAXON 115: 535] Expert reviewers: Giuseppe Venturella, Solomon P. Wasser Mycodiversity studies in selected ecosystems of Greece: 5. Basidiomycetes associated with woods dominated by Castanea sativa (Nafpactia Mts., central Greece) ELIAS POLEMIS1, DIMITRIS M. DIMOU1,3, LEONIDAS POUNTZAS4, DIMITRIS TZANOUDAKIS2 & GEORGIOS I. ZERVAKIS1* 1 [email protected], [email protected] Agricultural University of Athens, Lab. of General & Agricultural Microbiology Iera Odos 75, 11855 Athens, Greece 2 University of Patras, Dept. of Biology, Panepistimioupoli, 26500 Rion, Greece 3 Koritsas 10, 15343 Agia Paraskevi, Greece 4 Technological Educational Institute of Mesologgi, 30200 Mesologgi, Greece Abstract — Very scarce literature data are available on the macrofungi associated with sweet chestnut trees (Castanea sativa, Fagaceae). We report here the results of an inventory of basidiomycetes, which was undertaken in the region of Nafpactia Mts., central Greece. The investigated area, with woods dominated by C. sativa, was examined for the first time in respect to its mycodiversity. One hundred and four species belonging in 54 genera were recorded. Fifteen species (Conocybe pseudocrispa, Entoloma nitens, Lactarius glaucescens, Lichenomphalia velutina, Parasola schroeteri, Pholiotina coprophila, Russula alutacea, R. azurea, R. pseudoaeruginea, R. pungens, R. vitellina, Sarcodon glaucopus, Tomentella badia, T. fibrosa and Tubulicrinis sororius) are reported for the first time from Greece. In addition, 33 species constitute new habitats/hosts/substrates records. Key words — biodiversity, macromycete, Mediterranean, mushroom Introduction Castanea sativa Mill., Fagaceae (sweet chestnut) generally prefers north- facing slopes where the rainfall is greater than 600 mm, on moderately acid soils (pH 4.5–6.5) with a light texture. It covers ca. -
Influence of Tree Species on Richness and Diversity of Epigeous Fungal
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Archive Ouverte en Sciences de l'Information et de la Communication fungal ecology 4 (2011) 22e31 available at www.sciencedirect.com journal homepage: www.elsevier.com/locate/funeco Influence of tree species on richness and diversity of epigeous fungal communities in a French temperate forest stand Marc BUE´Ea,*, Jean-Paul MAURICEb, Bernd ZELLERc, Sitraka ANDRIANARISOAc, Jacques RANGERc,Re´gis COURTECUISSEd, Benoıˆt MARC¸AISa, Franc¸ois LE TACONa aINRA Nancy, UMR INRA/UHP 1136 Interactions Arbres/Microorganismes, 54280 Champenoux, France bGroupe Mycologique Vosgien, 18 bis, place des Cordeliers, 88300 Neufchaˆteau, France cINRA Nancy, UR 1138 Bioge´ochimie des Ecosyste`mes Forestiers, 54280 Champenoux, France dUniversite´ de Lille, Faculte´ de Pharmacie, F59006 Lille, France article info abstract Article history: Epigeous saprotrophic and ectomycorrhizal (ECM) fungal sporocarps were assessed during Received 30 September 2009 7 yr in a French temperate experimental forest site with six 30-year-old mono-specific Revision received 10 May 2010 plantations (four coniferous and two hardwood plantations) and one 150-year-old native Accepted 21 July 2010 mixed deciduous forest. A total of 331 fungal species were identified. Half of the fungal Available online 6 October 2010 species were ECM, but this proportion varied slightly by forest composition. The replace- Corresponding editor: Anne Pringle ment of the native forest by mono-specific plantations, including native species such as beech and oak, considerably altered the diversity of epigeous ECM and saprotrophic fungi. Keywords: Among the six mono-specific stands, fungal diversity was the highest in Nordmann fir and Conifer plantation Norway spruce plantations and the lowest in Corsican pine and Douglas fir plantations. -
Chemical Elements in Ascomycetes and Basidiomycetes
Chemical elements in Ascomycetes and Basidiomycetes The reference mushrooms as instruments for investigating bioindication and biodiversity Roberto Cenci, Luigi Cocchi, Orlando Petrini, Fabrizio Sena, Carmine Siniscalco, Luciano Vescovi Editors: R. M. Cenci and F. Sena EUR 24415 EN 2011 1 The mission of the JRC-IES is to provide scientific-technical support to the European Union’s policies for the protection and sustainable development of the European and global environment. European Commission Joint Research Centre Institute for Environment and Sustainability Via E.Fermi, 2749 I-21027 Ispra (VA) Italy Legal Notice Neither the European Commission nor any person acting on behalf of the Commission is responsible for the use which might be made of this publication. Europe Direct is a service to help you find answers to your questions about the European Union Freephone number (*): 00 800 6 7 8 9 10 11 (*) Certain mobile telephone operators do not allow access to 00 800 numbers or these calls may be billed. A great deal of additional information on the European Union is available on the Internet. It can be accessed through the Europa server http://europa.eu/ JRC Catalogue number: LB-NA-24415-EN-C Editors: R. M. Cenci and F. Sena JRC65050 EUR 24415 EN ISBN 978-92-79-20395-4 ISSN 1018-5593 doi:10.2788/22228 Luxembourg: Publications Office of the European Union Translation: Dr. Luca Umidi © European Union, 2011 Reproduction is authorised provided the source is acknowledged Printed in Italy 2 Attached to this document is a CD containing: • A PDF copy of this document • Information regarding the soil and mushroom sampling site locations • Analytical data (ca, 300,000) on total samples of soils and mushrooms analysed (ca, 10,000) • The descriptive statistics for all genera and species analysed • Maps showing the distribution of concentrations of inorganic elements in mushrooms • Maps showing the distribution of concentrations of inorganic elements in soils 3 Contact information: Address: Roberto M. -
Phd. Thesis Sana Jabeen.Pdf
ECTOMYCORRHIZAL FUNGAL COMMUNITIES ASSOCIATED WITH HIMALAYAN CEDAR FROM PAKISTAN A dissertation submitted to the University of the Punjab in partial fulfillment of the requirements for the degree of DOCTOR OF PHILOSOPHY in BOTANY by SANA JABEEN DEPARTMENT OF BOTANY UNIVERSITY OF THE PUNJAB LAHORE, PAKISTAN JUNE 2016 TABLE OF CONTENTS CONTENTS PAGE NO. Summary i Dedication iii Acknowledgements iv CHAPTER 1 Introduction 1 CHAPTER 2 Literature review 5 Aims and objectives 11 CHAPTER 3 Materials and methods 12 3.1. Sampling site description 12 3.2. Sampling strategy 14 3.3. Sampling of sporocarps 14 3.4. Sampling and preservation of fruit bodies 14 3.5. Morphological studies of fruit bodies 14 3.6. Sampling of morphotypes 15 3.7. Soil sampling and analysis 15 3.8. Cleaning, morphotyping and storage of ectomycorrhizae 15 3.9. Morphological studies of ectomycorrhizae 16 3.10. Molecular studies 16 3.10.1. DNA extraction 16 3.10.2. Polymerase chain reaction (PCR) 17 3.10.3. Sequence assembly and data mining 18 3.10.4. Multiple alignments and phylogenetic analysis 18 3.11. Climatic data collection 19 3.12. Statistical analysis 19 CHAPTER 4 Results 22 4.1. Characterization of above ground ectomycorrhizal fungi 22 4.2. Identification of ectomycorrhizal host 184 4.3. Characterization of non ectomycorrhizal fruit bodies 186 4.4. Characterization of saprobic fungi found from fruit bodies 188 4.5. Characterization of below ground ectomycorrhizal fungi 189 4.6. Characterization of below ground non ectomycorrhizal fungi 193 4.7. Identification of host taxa from ectomycorrhizal morphotypes 195 4.8. -
Downloaded from EMBL [25]
BMC Microbiology BioMed Central Methodology article Open Access Fungal-specific PCR primers developed for analysis of the ITS region of environmental DNA extracts Kendall J Martin*1 and Paul T Rygiewicz2 Address: 1Dynamac Corporation, National Health and Environmental Effects Research Laboratory, Corvallis, OR USA and 2USEPA National Health and Environmental Effects Research Laboratory, Corvallis, OR, USA Email: Kendall J Martin* - [email protected]; Paul T Rygiewicz - [email protected] * Corresponding author Published: 18 May 2005 Received: 30 November 2004 Accepted: 18 May 2005 BMC Microbiology 2005, 5:28 doi:10.1186/1471-2180-5-28 This article is available from: http://www.biomedcentral.com/1471-2180/5/28 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. PCRprimersbasidiomycetesascomycetesInternal Transcribed Spacer (ITS)X/T rapid extraction method Abstract Background: The Internal Transcribed Spacer (ITS) regions of fungal ribosomal DNA (rDNA) are highly variable sequences of great importance in distinguishing fungal species by PCR analysis. Previously published PCR primers available for amplifying these sequences from environmental samples provide varying degrees of success at discriminating against plant DNA while maintaining a broad range of compatibility. Typically, it has been necessary to use multiple primer sets to accommodate the range of fungi under study, potentially creating artificial distinctions for fungal sequences that amplify with more than one primer set. Results: Numerous sequences for PCR primers were tested to develop PCR assays with a wide range of fungal compatibility and high discrimination from plant DNA. -
Mycology Praha
f I VO LUM E 52 I / I [ 1— 1 DECEMBER 1999 M y c o l o g y l CZECH SCIENTIFIC SOCIETY FOR MYCOLOGY PRAHA J\AYCn nI .O §r%u v J -< M ^/\YC/-\ ISSN 0009-°476 n | .O r%o v J -< Vol. 52, No. 1, December 1999 CZECH MYCOLOGY ! formerly Česká mykologie published quarterly by the Czech Scientific Society for Mycology EDITORIAL BOARD Editor-in-Cliief ; ZDENĚK POUZAR (Praha) ; Managing editor JAROSLAV KLÁN (Praha) j VLADIMÍR ANTONÍN (Brno) JIŘÍ KUNERT (Olomouc) ! OLGA FASSATIOVÁ (Praha) LUDMILA MARVANOVÁ (Brno) | ROSTISLAV FELLNER (Praha) PETR PIKÁLEK (Praha) ; ALEŠ LEBEDA (Olomouc) MIRKO SVRČEK (Praha) i Czech Mycology is an international scientific journal publishing papers in all aspects of 1 mycology. Publication in the journal is open to members of the Czech Scientific Society i for Mycology and non-members. | Contributions to: Czech Mycology, National Museum, Department of Mycology, Václavské 1 nám. 68, 115 79 Praha 1, Czech Republic. Phone: 02/24497259 or 96151284 j SUBSCRIPTION. Annual subscription is Kč 350,- (including postage). The annual sub scription for abroad is US $86,- or DM 136,- (including postage). The annual member ship fee of the Czech Scientific Society for Mycology (Kč 270,- or US $60,- for foreigners) includes the journal without any other additional payment. For subscriptions, address changes, payment and further information please contact The Czech Scientific Society for ! Mycology, P.O.Box 106, 11121 Praha 1, Czech Republic. This journal is indexed or abstracted in: i Biological Abstracts, Abstracts of Mycology, Chemical Abstracts, Excerpta Medica, Bib liography of Systematic Mycology, Index of Fungi, Review of Plant Pathology, Veterinary Bulletin, CAB Abstracts, Rewicw of Medical and Veterinary Mycology. -
Moeszia9-10.Pdf
Tartalom Tanulmányok • Original papers .............................................................................................. 3 Contents Pál-Fám Ferenc, Benedek Lajos: Kucsmagombák és papsapkagombák Székelyföldön. Előfordulás, fajleírások, makroszkópikus határozókulcs, élőhelyi jellemzés .................................... 3 Ferenc Pál-Fám, Lajos Benedek: Morels and Elfin Saddles in Székelyland, Transylvania. Occurrence, Species Description, Macroscopic Key, Habitat Characterisation ........................... 13 Pál-Fám Ferenc, Benedek Lajos: A Kárpát-medence kucsmagombái és papsapkagombái képekben .................................................................................................................................... 18 Ferenc Pál-Fám, Lajos Benedek: Pictures of Morels and Elfin Saddles from the Carpathian Basin ....................................................................................................................... 18 Szász Balázs: Újabb adatok Olthévíz és környéke nagygombáinak ismeretéhez .......................... 28 Balázs Szász: New Data on Macrofungi of Hoghiz Region (Transylvania, Romania) ................. 42 Pál-Fám Ferenc, Szász Balázs, Szilvásy Edit, Benedek Lajos: Adatok a Baróti- és Bodoki-hegység nagygombáinak ismeretéhez ............................................................................ 44 Ferenc Pál-Fám, Balázs Szász, Edit Szilvásy, Lajos Benedek: Contribution to the Knowledge of Macrofungi of Baróti- and Bodoki Mts., Székelyland, Transylvania ..................... 53 Pál-Fám -
Russula Albonigra
De Lange et al. IMA Fungus (2021) 12:20 https://doi.org/10.1186/s43008-021-00064-0 IMA Fungus RESEARCH Open Access Enlightening the black and white: species delimitation and UNITE species hypothesis testing in the Russula albonigra species complex Ruben De Lange1* , Slavomír Adamčík2 , Katarína Adamčíkova3 , Pieter Asselman1 , Jan Borovička4,5 , Lynn Delgat1,6 , Felix Hampe1 and Annemieke Verbeken1 ABSTRACT Russula albonigra is considered a well-known species, morphologically delimited by the context of the basidiomata blackening without intermediate reddening, and the menthol-cooling taste of the lamellae. It is supposed to have a broad ecological range and a large distribution area. A thorough molecular analysis based on four nuclear markers (ITS, LSU, RPB2 and TEF1-α) shows this traditional concept of R. albonigra s. lat. represents a species complex consisting of at least five European, three North American, and one Chinese species. Morphological study shows traditional characters used to delimit R. albonigra are not always reliable. Therefore, a new delimitation of the R. albonigra complex is proposed and a key to the described European species of R.subgen.Compactae is presented. A lectotype and an epitype are designated for R. albonigra and three new European species are described: R. ambusta, R. nigrifacta, and R. ustulata. Different thresholds of UNITE species hypotheses were tested against the taxonomic data. The distance threshold of 0.5% gives a perfect match to the phylogenetically defined species within the R. albonigra complex. Publicly available sequence data can contribute to species delimitation and increase our knowledge on ecology and distribution, but the pitfalls are short and low quality sequences. -
Plant Ecophysiology
Plant Ecophysiology Michael Tausz Nancy Grulke Editors Trees in a Changing Environment Ecophysiology, Adaptation, and Future Survival Trees in a Changing Environment [email protected] Plant Ecophysiology Volume 9 Series Editors: Luit J. De Kok University of Groningen, The Netherlands Malcolm J. Hawkesford Rothamsted Research, United Kingdom Aims & Scope: The Springer Series in Plant Ecophysiology comprises a series of volumes that deals with the impact of biotic and abiotic factors on plant functioning and physiological adaptation to the environment. The aim of the Plant Ecophysiology series is to review and integrate the present knowledge on the impact of the environment on plant functioning and adaptation at various levels: from the molecular, biochemical and physiological to a whole plant level. This series is of interest to scientists who like to be informed of new developments and insights in plant ecophysiology, and can be used as advanced textbooks for biology students. The titles published in this series are listed at the end of this volume. [email protected] Trees in a Changing Environment Ecophysiology, Adaptation, and Future Survival Edited by Michael Tausz Forest and Ecosystem Science University of Melbourne Victoria Australia and Nancy Grulke Pacific NW Research Station WWETAC USDA Forest Service Prineville, Oregon, USA [email protected] Editors Michael Tausz Nancy Grulke Forest and Ecosystem Science Pacific NW Research Station WWETAC University of Melbourne USDA Forest Service Victoria Prineville, Oregon, USA Australia ISSN 1572-5561 ISSN 1572-5561 (electronic) ISBN 978-94-017-9099-4 ISBN 978-94-017-9100-7 (eBook) DOI 10.1007/978-94-017-9100-7 Springer Dordrecht Heidelberg New York London Library of Congress Control Number: 2014946587 © Springer Science+Business Media Dordrecht (outside the USA) 2014 Chapter 11 was created within the capacity of an US government employment. -
Ekim 2017 2.Cdr
Ekm(2017)8(2)76-84 Do :10.15318/Fungus.2017.36 04.02.2017 11.07.2017 Research Artcle Macrofungal Diversity of Yalova Province Hakan ALLI*1 , Selime Semra CANDAR1 , Ilgaz AKATA2 1Muğla Sıtkı Koçman University, Faculty of Science, Department of Biology, Kötekli, Muğla, Turkey 2Ankara University, Faculty of Science, Department of Biology, Tandoğan, Ankara, Turkey Abstract: Fungal samples were collected from different localities in the boundaries of Yalova province between 2010 and 2012. As a result of field and laboratory studies, 91 species within the 41 families and 14 orders were identified. 17 of them belong to the division Ascomycota and 74 to Basidiomycota. The species list is given with the informations on localities, habitats, collecting dates and collection numbers. Key words: Macrofungal diversity, Yalova, Marmara region, Turkey. Yalova İlinin Makrofungus Çeşitliliği Öz: Mantar örnekleri 2010 ve 2012 yılları arasında Yalova il sınırları içerisindeki farklı lokalitelerden toplanmıştır. Arazi ve laboratuar çalışmaları sonucunda, 14 ordo ve 41 familya içerisinde yer alan 91 tür tespit edilmiştir. Bunlardan 17'si Ascomycota, 74'ü ise Basidiomycota bölümüne aittir. Tür listesi, lokaliteler, habitatlar, toplama tarihleri ve koleksiyon numaraları ile ilgili bilgilerle birlikte verilmiştir. Anahtar kelimeler: Makrofungus çeşitliliği, Yalova, Marmara Bölgesi, Türkiye. Introduction Koçak, 2016; Doğan and Akata, 2015; Doğan Macrofungi are specific part of kingdom and Kurt, 2016; Dülger and Akata, 2016; Kaya et fungi that include the divisions Ascomycota and al., 2016; Sesli and Topçu Sesli, 2016, 2017; Basidiomycota with large and easily observed Sesli and Vizzini, 2017; Sesli et al., 2016; Öztürk fruiting bodies (Servi et al., 2010). Most of them C. -
<I>Russula</I> <I>Anthracina</I> and Its
MYCOTAXON ISSN (print) 0093-4666 (online) 2154-8889 © 2016. Mycotaxon, Ltd. January–March 2016—Volume 131, pp. 31–44 http://dx.doi.org/10.5248/131.31 First record of Russula anthracina and its ectomycorrhiza associated with Himalayan cedar from South Asia Sana Jabeen1*, Abdul Rehman Niazi2 & Abdul Nasir Khalid2 1Harvard University Herbaria, Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138, USA 2Department of Botany, University of the Punjab, Quaid-e-Azam Campus-54590, Lahore, Pakistan * Correspondence to: [email protected] Abstract — Russula anthracina and its ectomycorrhiza are identified on the basis of morphological characters and molecular analysis. The species is characterized by brittle and blackening basidiomata with pinkish lamellae. Ectomycorrhizal morphotypes are characterized by monopodial pinnate ramification and the presence of typical russuloid cystidia on outer mantle surface. Molecular phylogenetic analysis clustered the ITS sequences generated in this study with other R. anthracina sequences. This is the first report of R. anthracina from Pakistan and South Asia. Key words — Cedrus deodara, Russula sect. Compactae, Swat Introduction The genus Russula Pers. (Agaricomycetes, Russulales, Russulaceae) is represented by more than 750 species distributed worldwide (Kirk et al. 2008, Das et al. 2013, Arora & Nguyen 2014, Razaq et al. 2014, Dutta et al. 2015). From Pakistan, 26 species of Russula have been reported to date (Ahmad et al. 1997, Niazi et al. 2006, Niazi 2008, Razaq et al. 2014, Jabeen et al 2015). Russula species are important ecologically as ectomycorrhizal symbionts associated with many kinds of forest trees (Richardson 1970; Bills et al. 1986; Villeneuve et al. 1989, 1991; Gardes & Bruns 1996; Buyck et al. -
Covered = = from Public Databases (Fig
Persoonia 42, 2019: 127–185 ISSN (Online) 1878-9080 www.ingentaconnect.com/content/nhn/pimj RESEARCH ARTICLE https://doi.org/10.3767/persoonia.2019.42.06 A phylogenetic and taxonomic revision of sequestrate Russulaceae in Mediterranean and temperate Europe J.M. Vidal1*, P. Alvarado2*, M. Loizides3, G. Konstantinidis4, P. Chachuła5, P. Mleczko6, G. Moreno7, A. Vizzini8, M. Krakhmalnyi9, A. Paz10, J. Cabero11, V. Kaounas12, M. Slavova13, B. Moreno-Arroyo14, J. Llistosella15 Key words Abstract A comprehensive morphological and genetic study of type material and new collections of sequestrate Russulales species formerly belonging to the genera Arcangeliella, Elasmomyces, Gymnomyces, Hydnangium, angiocarpic Hymenogaster, Macowanites, Martellia, Secotium and Zelleromyces is here undertaken, for the purpose of providing Arcangeliella a complete taxonomical revision of sequestrate Russulaceae species in the Mediterranean and temperate regions Elasmomyces of Europe. As a result, seven distinct taxa in the genus Lactarius and 18 in the genus Russula are identified. Six Europe of them are new species: L. populicola, L. subgiennensis, R. bavarica, R. candidissima, R. hobartiae and R. medi Gymnomyces terraneensis, and seven represent new combinations: L. josserandii (≡ Zelleromyces josserandii), L. soehneri Lactarius (≡ Hydnangium soehneri), R. candida (≡ Hydnangium candidum), R. cerea (≡ Hydnangium cereum), R. messapica Macowanites var. messapicoides (≡ Macowanites messapicoides), R. meridionalis (≡ Zelleromyces meridionalis) and R. neuhoffii Martellia (≡ Hydnangium neuhoffii). Twenty-two of the 25 taxa are illustrated, while descriptions, microscopy images, as well pseudoangiocarpic as extensive information on the ecology, chorology and phylogeny for all taxa are provided. A key is further included taxonomy to facilitate their identification. Zelleromyces Article info Received: 2 July 2018; Accepted: 4 December 2018; Published: 5 April 2019.