Dr. Fritsch's Permian Amphibians of Bohemia
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Early Tetrapod Relationships Revisited
Biol. Rev. (2003), 78, pp. 251–345. f Cambridge Philosophical Society 251 DOI: 10.1017/S1464793102006103 Printed in the United Kingdom Early tetrapod relationships revisited MARCELLO RUTA1*, MICHAEL I. COATES1 and DONALD L. J. QUICKE2 1 The Department of Organismal Biology and Anatomy, The University of Chicago, 1027 East 57th Street, Chicago, IL 60637-1508, USA ([email protected]; [email protected]) 2 Department of Biology, Imperial College at Silwood Park, Ascot, Berkshire SL57PY, UK and Department of Entomology, The Natural History Museum, Cromwell Road, London SW75BD, UK ([email protected]) (Received 29 November 2001; revised 28 August 2002; accepted 2 September 2002) ABSTRACT In an attempt to investigate differences between the most widely discussed hypotheses of early tetrapod relation- ships, we assembled a new data matrix including 90 taxa coded for 319 cranial and postcranial characters. We have incorporated, where possible, original observations of numerous taxa spread throughout the major tetrapod clades. A stem-based (total-group) definition of Tetrapoda is preferred over apomorphy- and node-based (crown-group) definitions. This definition is operational, since it is based on a formal character analysis. A PAUP* search using a recently implemented version of the parsimony ratchet method yields 64 shortest trees. Differ- ences between these trees concern: (1) the internal relationships of aı¨stopods, the three selected species of which form a trichotomy; (2) the internal relationships of embolomeres, with Archeria -
Physical and Environmental Drivers of Paleozoic Tetrapod Dispersal Across Pangaea
ARTICLE https://doi.org/10.1038/s41467-018-07623-x OPEN Physical and environmental drivers of Paleozoic tetrapod dispersal across Pangaea Neil Brocklehurst1,2, Emma M. Dunne3, Daniel D. Cashmore3 &Jӧrg Frӧbisch2,4 The Carboniferous and Permian were crucial intervals in the establishment of terrestrial ecosystems, which occurred alongside substantial environmental and climate changes throughout the globe, as well as the final assembly of the supercontinent of Pangaea. The fl 1234567890():,; in uence of these changes on tetrapod biogeography is highly contentious, with some authors suggesting a cosmopolitan fauna resulting from a lack of barriers, and some iden- tifying provincialism. Here we carry out a detailed historical biogeographic analysis of late Paleozoic tetrapods to study the patterns of dispersal and vicariance. A likelihood-based approach to infer ancestral areas is combined with stochastic mapping to assess rates of vicariance and dispersal. Both the late Carboniferous and the end-Guadalupian are char- acterised by a decrease in dispersal and a vicariance peak in amniotes and amphibians. The first of these shifts is attributed to orogenic activity, the second to increasing climate heterogeneity. 1 Department of Earth Sciences, University of Oxford, South Parks Road, Oxford OX1 3AN, UK. 2 Museum für Naturkunde, Leibniz-Institut für Evolutions- und Biodiversitätsforschung, Invalidenstraße 43, 10115 Berlin, Germany. 3 School of Geography, Earth and Environmental Sciences, University of Birmingham, Birmingham B15 2TT, UK. 4 Institut -
Bones, Molecules, and Crown- Tetrapod Origins
TTEC11 05/06/2003 11:47 AM Page 224 Chapter 11 Bones, molecules, and crown- tetrapod origins Marcello Ruta and Michael I. Coates ABSTRACT The timing of major events in the evolutionary history of early tetrapods is discussed in the light of a new cladistic analysis. The phylogenetic implications of this are com- pared with those of the most widely discussed, recent hypotheses of basal tetrapod interrelationships. Regardless of the sequence of cladogenetic events and positions of various Early Carboniferous taxa, these fossil-based analyses imply that the tetrapod crown-group had originated by the mid- to late Viséan. However, such estimates of the lissamphibian–amniote divergence fall short of the date implied by molecular studies. Uneven rates of molecular substitutions might be held responsible for the mismatch between molecular and morphological approaches, but the patchy quality of the fossil record also plays an important role. Morphology-based estimates of evolutionary chronology are highly sensitive to new fossil discoveries, the interpreta- tion and dating of such material, and the impact on tree topologies. Furthermore, the earliest and most primitive taxa are almost always known from very few fossil localities, with the result that these are likely to exert a disproportionate influence. Fossils and molecules should be treated as complementary approaches, rather than as conflicting and irreconcilable methods. Introduction Modern tetrapods have a long evolutionary history dating back to the Late Devonian. Their origins are rooted into a diverse, paraphyletic assemblage of lobe-finned bony fishes known as the ‘osteolepiforms’ (Cloutier and Ahlberg 1996; Janvier 1996; Ahlberg and Johanson 1998; Jeffery 2001; Johanson and Ahlberg 2001; Zhu and Schultze 2001). -
1 1 Appendix S1: Complete List of Characters And
1 1 Appendix S1: Complete list of characters and modifications to the data matrix of RC07, with 2 reports of new observations of specimens. 3 The names, the abbreviations and the order of all characters and their states are 4 unchanged from RC07 unless a change is explained. We renumbered the characters we did 5 not delete from 1 to 277, so the character numbers do not match those of RC07. However, 6 merged characters retain the abbreviations of all their components: PREMAX 1-2-3 (our 7 character 1) consists of the characters PREMAX 1, PREMAX 2 and PREMAX 3 of RC07, 8 while MAX 5/PAL 5 (our ch. 22) is assembled from MAX 5 and PAL 5 of RC07. We did not 9 add any characters, except for splitting state 1 of INT FEN 1 into the new state 1 of INT FEN 10 1 (ch. 84) and states 1 and 2 of the new character MED ROS 1 (ch. 85), undoing the merger 11 of PIN FOR 1 and PIN FOR 2 (ch. 91 and 92) and splitting state 0 of TEETH 3 into the new 12 state 0 of TEETH 3 (ch. 183) and the entire new character TEETH 10 (ch. 190). A few 13 characters have additional states or are recoded in other ways. Deleted characters are retained 14 here, together with the reasons why we deleted them and the changes we made to their scores. 15 All multistate characters mention in their names whether they are ordered, unordered, 16 or treated according to a stepmatrix. -
For Peer Review Only
Systematic Biology For peer review only. Do not cite. ForPhylogenetic Peer stability, Review tree shape, and Only character compatibility: a case study using early tetrapods Journal: Systematic Biology Manuscript ID USYB-2014-243.R1 Manuscript Type: Regular Manuscript Date Submitted by the Author: n/a Complete List of Authors: Bernardi, Massimo; MUSE - Museo delle Scienze, Geology and Palaeontology Angielczyk, Kenneth; Field Museum of Natural History, Integrative Research Center Mitchell, Jonathan; University of Michigan Ruta, Marcello; University of Lincoln, School of Life Sciences Character compatibility, Tree balance, Tree distance, Diversification shifts, Keywords: Tetrapods , Terrestrialization, Paleozoic, Mesozoic http://mc.manuscriptcentral.com/systbiol Page 1 of 85 Systematic Biology 1 Phylogenetic stability, tree shape, and character compatibility: a case study using early 2 tetrapods 3 For Peer Review Only 4 Massimo Bernardi 1,2 , Kenneth D. Angielczyk 3, Jonathan S. Mitchell 4, and Marcello Ruta 5 5 6 1 MuSe – Museo delle Scienze, Corso del Lavoro e della Scienza, 3, 38122 Trento, Italy. 7 2 School of Earth Sciences, University of Bristol, Wills Memorial Building, Queens Road, Bristol, 8 BS8 1RJ, United Kingdom. 9 3 Integrative Research Center, Field Museum of Natural History, 1400 South Lake Shore Drive, 10 Chicago, IL 60605-2496, USA. 11 4 Department of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, MI 12 48103, USA 13 5 School of Life Sciences, Joseph Banks Laboratories, University of Lincoln, Green Lane, 14 Lincoln LN6 7DL, United Kingdom. 15 16 * Corresponding author 17 Massimo Bernardi, MuSe – Museo delle Scienze, Corso del Lavoro e della Scienza, 3, 38122 18 Trento, Italy 19 Email: [email protected] 20 Phone: +39 0461 270344 http://mc.manuscriptcentral.com/systbiol Systematic Biology Page 2 of 85 21 Abstract 22 Phylogenetic tree shape varies as the evolutionary processes affecting a clade change over time. -
(Temnospondyli), and the Evolution of Modern
THE LOWER PERMIAN DISSOROPHOID DOLESERPETON (TEMNOSPONDYLI), AND THE EVOLUTION OF MODERN AMPHIBIANS Trond Sigurdsen Department of Biology McGill University, Montreal November 2009 A thesis submitted to McGill University in partial fulfillment of the requirements of the degree of Doctor of Philosophy © Trond Sigurdsen 2009 1 ACKNOWLEDGMENTS I am deeply grateful to my supervisors Robert L. Carroll and David M. Green for their support, and for revising and correcting the drafts of the individual chapters. Without their guidance, encouragement, and enthusiasm this project would not have been possible. Hans Larsson has also provided invaluable help, comments, and suggestions. Special thanks go to John R. Bolt, who provided specimens and contributed to Chapters 1 and 3. I thank Farish Jenkins, Jason Anderson, and Eric Lombard for making additional specimens available. Robert Holmes, Jean-Claude Rage, and Zbyněk Roček have all provided helpful comments and observations. Finally, I would like to thank present and past members of the Paleolab at the Redpath Museum, Montreal, for helping out in various ways. Specifically, Thomas Alexander Dececchi, Nadia Fröbisch, Luke Harrison, Audrey Heppleston and Erin Maxwell have contributed helpful comments and technical insight. Funding was provided by NSERC, the Max Stern Recruitment Fellowship (McGill), the Delise Allison and Alma Mater student travel grants (McGill), and the Society of Vertebrate Paleontology Student Travel Grant. 2 CONTRIBUTIONS OF AUTHORS Chapters 1 and 3 were written in collaboration with Dr. John R. Bolt from the Field Museum of Chicago. The present author decided the general direction of these chapters, studied specimens, conducted the analyses, and wrote the final drafts. -
Of Modern Amphibians: a Commentary
The origin(s) of modern amphibians: a commentary. D. Marjanovic, Michel Laurin To cite this version: D. Marjanovic, Michel Laurin. The origin(s) of modern amphibians: a commentary.. Journal of Evolutionary Biology, Wiley, 2009, 36, pp.336-338. 10.1007/s11692-009-9065-8. hal-00549002 HAL Id: hal-00549002 https://hal.archives-ouvertes.fr/hal-00549002 Submitted on 7 May 2020 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. The origin(s) of modern amphibians: a commentary By David Marjanović1 and Michel Laurin1* 1Address: UMR CNRS 7207 “Centre de Recherches sur la Paléobiodiversité et les Paléoenvironnements”, Muséum National d’Histoire Naturelle, Département Histoire de la Terre, Bâtiment de Géologie, case postale 48, 57 rue Cuvier, F-75231 Paris cedex 05, France *Corresponding author tel/fax. (+33 1) 44 27 36 92 E-mail: [email protected] Number of words: 1884 Number of words in text section only: 1378 2 Anderson (2008) recently reviewed the controversial topic of extant amphibian origins, on which three (groups of) hypotheses exist at the moment. Anderson favors the “polyphyly hypothesis” (PH), which considers the extant amphibians to be polyphyletic with respect to many Paleozoic limbed vertebrates and was most recently supported by the analysis of Anderson et al. -
Application of Micro-Computed Tomography Towards
Application of micro-computed tomography towards a taxonomic and palaeobiological reassessment of Huxley and Wright’s (1867) tetrapods from the Jarrow Assemblage (Langsettian, Pennsylvanian), Co. Kilkenny, Ireland. Ph.D. Thesis 2020 Aodhán Ó Gogáin I declare that this thesis has not been submitted as an exercise for a degree at this or any other university and it is entirely my own work. I agree to deposit this thesis in the University’s open access institutional repository or allow the library to do so on my behalf, subject to Irish Copyright Legislation and Trinity College Library conditions of use and acknowledgement. Aodhán Ó Gogáin Signature i ii Summary. The Jarrow assemblage of Co. Kilkenny, Ireland preserves a diverse assortment of fish and tetrapods from the earliest Pennsylvanian (Langsettian). The Pennsylvanian was an important period in tetrapod evolution, during which many forms were evolving to occupy new ecological niches. This makes the Jarrow assemblage an important fossil site for investigating early tetrapod evolution and ecology as it preserves the earliest example of a coal swamp assemblage. But despite its importance, it is relatively poorly understood compared to later similar assemblages at Linton, Ohio, Nýřany, Czech Republic and Newsham, England. While fossils from all four assemblages are highly compressed, specimens from Jarrow stand out as being poorer in appearance. In unprepared specimens, the boundary between the body fossil and the matrix is difficult to make out. Even in manually prepared specimens this is the case. Additionally, many specimens have been degraded as a result of pyrite disease. The application of micro-computed tomography (µCT) has become the normal method for aiding in descriptive palaeontology. -
Angela Milner Keraterpeton.Pdf
Title A morphological revision of Keraterpeton, the earliest horned nectridean from the Pennsylvanian of England and Ireland. Authors Milner, Angela Date Submitted 2020-02-07 Earth and Environmental Science Transactions of the Royal Society of Edinburgh A morphological revision of the earliest horned nectridean from the Pennsylvanian of England and Ireland Earth and Environmental Science Transactions of the Royal Society of Journal: Edinburgh Manuscript ID Draft Manuscript Type: Early Vertebrate Evolution Date Submitted by the Author: n/a Complete List of Authors: Milner, Angela; The Natural History Museum, Earth Sceinces For<i>Keraterpeton</i>, Peer Review anatomy, evolution, functional morphology, Keywords: systematics Cambridge University Press Page 1 of 43 Earth and Environmental Science Transactions of the Royal Society of Edinburgh 1 A morphological revision of the earliest horned nectridean from the Pennsylvanian of England and Ireland Angela C. Milner Department of Earth Sciences The Natural History Museum Cromwell Road London SW7 5BD [email protected] Running head For Peer Review Keraterpeton from the Pennsylvanian of England and Ireland Cambridge University Press Earth and Environmental Science Transactions of the Royal Society of Edinburgh Page 2 of 43 2 ABSTRACT The aquatic diplocaulid nectridean Keraterpeton galvani, is the commonest taxon represented in the Jarrow Coal assemblage from Kilkenny, Ireland. The Jarrow locality has yielded the earliest known Carboniferous coal-swamp fauna in the fossil record and is therefore of importance in understanding the history and diversity of the diplocaulid clade. The morphology of Keraterpeton is described in detail with emphasis on newly observed anatomical features. A reconstruction of the palate includes the presence of interpterygoid vacuities andnew morphological details of the pterygoid, parasphenoid and basicranial region. -
The Permo-Carboniferous Red Beds of North America and Their Vertebrate Fauna
/\ ^^ aV f>/! ^f*: ^^ ">= ^^L Si'-**' ^ ^-* ' Wit *}v- <5!. ^ y- I « '-^^'^ I *>< ^m f"M A T ',vf --Ar j^. ^•^f^ i t^'-i'^^. ^ '.« Xll. ' , 'i -f-f*' .A .^e^ ^ jr' vy 'A .w. j! -< \' ^ V! \ '^ -^ 3<t^™dv.:,.:C*^7^ ;j. I THE GIFT OF .k.-^.c^-aqn.^.. IE li 7583 QE 841.033""'""'"""""-"'"'^ "''*''°"* "«" ''eds ^'' Mlimm™« of Nort 3 1924 003 880 832 Cornell University Library x^^/ The original of this book is in the Cornell University Library. There are no known copyright restrictions in the United States on the use of the text. http://www.archive.org/details/cu31924003880832 THE PERMO-CARBONIFEROUS RED BEDS OF NORTH AMERICA AND THEIR VERTEBRATE FAUNA By E. C. QASE Professor of Historical Geology and Paleontology in the University of Michigan WASHINGTON, D. C. PUBLISHED BY THE CARNEGIE INSTITUTION OF WASHINGTON 1915 (J'T e-v. ('AJ;NE(!IE institution of WASli]N(!TOX Publication No, 2ti7 Ccpies of thW B«ol» vvere fitst iwutd JUIm251915 PUESS OF J. U. LIPPINCOTT COMPANY I'lIILADELPHIA ——————— CONTENTS Introduction :^ Chapter I. Description of the Southern Portion of the Plains Province 5 The Texas Region c Location of the Beds 5 Stratigraphy of the Beds 6 Formation Names 7 The Wichita Formation 8 The Clear Fork Formation 28 The Double Mountain Formation 31 Occurrence of Fossil Vertebrates 32 Sections 33 Climatic Variations Recorded in the Permo-Carboniferous Beds of Texas 42 Evidence of Climatic Conditions in Wichita time 42 Evidence of Chmatic Conditions in Clear Fork time 45 Summary of Climatic Conditions 49 Stratigraphy of the Beds in Oklahoma 51 Stratigraphy of the Beds in Kansas 56 Extension of the Red Beds beyond the Limits of Vertebrate Fossils in the Southern Portion of the Plains Province 58 Evidence of a Barrier, or the Interruption of the Red Beds, in the Southwest 60 Chapter II. -
For Peer Review 2.3.2
Earth and Environmental Science Transactions of the Royal Society of Edinburgh The evolution of the tetrapod humerus: morphometrics, disparity, and evolutionary rates Earth and Environmental Science Transactions of the Royal Society of Journal: Edinburgh Manuscript ID TRE-2018-0013.R1 Manuscript Type: Early Vertebrate Evolution Date Submitted by the Author: 25-Jul-2018 Complete List of Authors: Ruta, Marcello; University of Lincoln, School of Life Sciences Krieger, Jonathan; Home address, 11A Wynford Road ForAngielczyk, Peer Kenneth; Review Field Museum of Natural History, Earth Sciences, Integrative Research Centre Wills, Matthew; University of Bath, The Milner Centre for Evolution, Department of Biology and Biochemistry amniotes, eigenshape analysis, evolutionary rate shifts, humeral Keywords: morphology, lepospondyls, lissamphibians, tetrapodomorphs Cambridge University Press Page 1 of 53 Earth and Environmental Science Transactions of the Royal Society of Edinburgh 1 The evolution of the tetrapod humerus: morphometrics, disparity, and evolutionary rates Marcello Ruta1,*, Jonathan Krieger2, Kenneth D. Angielczyk3 and Matthew A. Wills4 1 School of Life Sciences,For University Peer of Lincoln, Review Lincoln LN6 7DL, UK 2 11A Wynford Road, Poole BH14 8PG, UK 3 Earth Sciences, Integrative Research Center, Field Museum of Natural History, Chicago, Illinois 60605-2496, USA 4 The Milner Centre for Evolution, Department of Biology and Biochemistry, The University of Bath, Bath BA2 7AY, UK * Corresponding author Cambridge University Press Earth and Environmental Science Transactions of the Royal Society of Edinburgh Page 2 of 53 2 ABSTRACT: The present study explores the macroevolutionary dynamics of shape changes in the humeri of all major grades and clades of early tetrapods and their fish-like forerunners. -
Paleontology
A GUIDE EXHIBITION GALLE RIES of the department of GEOLOGY AND PALEONTOLOGY BRITISH MUSEUM (NATURAL HISTORY), CROMWELL ROAD, LONDON, S.W. PART II. FOSSIL REPTILES, FISHES, AND INVERTEBRATES. With 94 Ir,lustrations -and 1 1'i.aw 550 B.86.$ ,jiPRINTED J1Y ORDER OF THE TRUSTEES. 1890. '*•: Sixpence. Original from and digitized by National University of Singapore Libraries 3: ;t3flfe >: V ' ' -V, \ :.::v . ,'r • ' ' v .A V. : ffls&sSSXmM - -? r __—__ * PRESENTED ^f)c "^ixitsfccs OF THE BRITISH MUSEUM. JlteffiBS IVi iii.1 —7—^—v—r^—r* ■ mi .Vi -W '-v ' . V,;.vi;>:0".;W Vv-.; • ' , "/-/'/A...,-*-'. Original from and digitized by National University of Singapore Libraries Original from and digitized by National University of Singapore Libraries ' ■ '• * - ,-/<• ■/. - ■■ a , .. ' Original from and digitized by National University of Singapore Libraries A GUIDE TO THE EXHIBITION GALLERIES OF THE DEPARTMENT OF GEOLOGY AND PALAEONTOLOGY IN THE BRITISH MUSEUM (NATURAL HISTORY), * CROMWELL ROAD, LONDON, S.W. Fart II.—Fossil Reptiles, Fishes, and Invertebrates. FEINTED BY ORDER OF TEE TRUSTEES. 1890. Original from and digitized by National University of Singapore Libraries london: habbison and sons, peinters in ordinary to her majesty, st. martin's lane. Original from and digitized by National University of Singapore Libraries iii TABLE OF CONTENTS. (PART II.) pages Table of Contents iii, if List of Illustrations v-viii Preface ............ is Table of Stratified Rocks ......... x Introduction xi, xii CLASS 3.—REPTILIA .... 1-61 Order I. PteboSAHBIa (Winged Lizards) 1-4 „ II. Cbocodilia (Crocodiles) 4-8 „ III. Dinosaubia (Huge Lizards) 8-24 Sub-order 1. Satteopoda (Lizard-footed) .... 9 „ „ 2. Theeopoda (Beast-footed) ...