Development of Real-time PCR Screening Methods for the Detection of Bacterial Toxin DNA Christina Egan, Ph.D. Director, Biodefense Laboratory Wadsworth Center N New York State Dept. of Health Y S D O
[email protected] H Biodefense Wadsworth Center Laboratory New York State Department of Health Overview • Wadsworth Center Biodefense Laboratory • Utility of rtPCR as a rapid screening method • Staphylococcal enterotoxin rtPCR • Clostridium botulinum rtPCR • New and upcoming technology N Y S D O H Biodefense Wadsworth Center Laboratory New York State Department of Health Biodefense Laboratory Services Threats Training •Powders, letters, “All Hazards” •Laboratorians •Biohazard Detection System •First Responders Foods •Intentional/Unintentional Assay Development Animals •Emerging diseases •Novel technologies •Wild, domestic •Optimized methods •Outbreaks, investigations Patients Network Partnerships •Naturally occuring •LRN •Smallpox vs. Vaccination events •FERN N Y •Emerging Diseases (SARS, Flu) •ERLN, ECLRN S D •USPS, BDS O H Biodefense Wadsworth Center Laboratory New York State Department of Health rtPCR Assay Development • Follow standardized procedure in the laboratory, based on guidelines developed for clinical specimen testing • Distinct development and validation phase • Important to evaluate extraction and mastermix components of assay • Assays were designed with multiplexing capability in mind • Assays are validated as singleplex assays and evaluated to meet analytical criteria (sensitivity, N Y specificity, etc.) and then diagnostic