DNA Research, 2018, 25(5), 547–560 doi: 10.1093/dnares/dsy024 Advance Access Publication Date: 25 July 2018 Full Paper Full Paper The yellowtail (Seriola quinqueradiata) genome and transcriptome atlas of the digestive tract Motoshige Yasuike1,*, Yuki Iwasaki1,†, Issei Nishiki1, Yoji Nakamura1, Aiko Matsuura1, Kazunori Yoshida2,‡, Tsutomu Noda2, Tadashi Andoh3, and Atushi Fujiwara1,* 1Research Center for Bioinformatics and Biosciences, National Research Institute of Fisheries Science, Japan Fisheries Research and Education Agency, Yokohama, Kanagawa 236-8648, Japan, 2Goto Laboratory, Stock Enhancement and Aquaculture Division, Seikai National Fisheries Research Institute Japan Fisheries Research and Education Agency, Tamanoura-cho, Goto, Nagasaki 853-0508, Japan, and 3Stock Enhancement and Aquaculture Division, Seikai National Fisheries Research Institute, Japan Fisheries Research and Education Agency, Nagasaki 851-2213, Japan *To whom correspondence should be addressed. Tel. þ81 045 788 7640. Fax. þ81 045 788 7640. Email:
[email protected] (M.Y.); Tel. þ81 045 788 7691. Fax. þ81 045 788 7691. Email:
[email protected] (A.F.) †Present address: Center for Information Biology, National Institute of Genetics, 1111 Yata, Mishima, Shizuoka 411-8540, Japan. ‡Present address: Kamiura Laboratory, Research Center for Aquatic Breeding, National Research Institute of Aquaculture, Japan Fisheries Research and Education Agency, Tsuiura, Kamiura, Saiki, Oita 879-2602, Japan. Edited by Dr. Osamu Ohara Received 8 November 2017; Editorial decision 26 June 2018; Accepted 28 June 2018 Abstract Seriola quinqueradiata (yellowtail) is the most widely farmed and economically important fish in aquaculture in Japan. In this study, we used the genome of haploid yellowtail fish larvae for de novo assembly of whole-genome sequences, and built a high-quality draft genome for the yellowtail.