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Tannin Degradation by Phytopathogen's Tannase: a Plant's
Biocatalysis and Agricultural Biotechnology 21 (2019) 101342 Contents lists available at ScienceDirect Biocatalysis and Agricultural Biotechnology journal homepage: http://www.elsevier.com/locate/bab Tannin degradation by phytopathogen’s tannase: A Plant’s defense perspective Kanti Prakash Sharma Department of Biosciences, Mody University of Science and Technology, Lakshmangarh, Sikar, Rajasthan, 332311, India ARTICLE INFO ABSTRACT Keywords: Tannins are plant secondary metabolites and characterized as plant defensive molecules. They impose a barrier Tannin against phytopathogens invasion in plants and thus oppose diseases occurrence in them. Tannase is an enzyme Tannase known for its ability to degrade plant tannins. Important plant pathogens also possess tannase coding sequence in Plant defense their genome. Researches on tannase are till date focused on its applications in animal nutrition, in bioreme Pathogen diation and in food industries etc. The information about tannase role with respect to pathogen’s virulence is Virulence very scanty or almost nil in scientific literature. The presence of tannase in pathogen’s genome is an adaptive feature which may be a part of its strategy to overcome the negative effects of plants tannins. The present review summarizes important aspects of tannase and its possible role in disease causing ability of pathogens in plants. 1. Introduction hydrolyzable tannins (Zhang et al., 2001). In complex tannins, a cate chin or epicatechin unit is bound glycosidically to a gallotannin or an Tannins are universally present in plants and represent the fourth ellagitannin unit to yield catechin or epicatechin and gallic acid or most abundant group of secondary metabolites after cellulose, hemi ellagic acid upon hydrolysis. -
BARNES-DISSERTATION-2016.Pdf (1.557Mb)
ABSORPTION AND METABOLISM OF MANGO (MANGIFERA INDICA L.) GALLIC ACID AND GALLOYL GLYCOSIDES A Dissertation by RYAN CRISPEN BARNES Submitted to the Office of Graduate and Professional Studies of Texas A&M University in partial fulfillment of the requirements for the degree of DOCTOR OF PHILOSOPHY Chair of Committee, Stephen Talcott Co-Chair of Committee, Susanne Talcott Committee Members, Nancy Turner Arul Jayaraman Head of Department, Boon Chew December 2016 Major Subject: Food Science and Technology Copyright 2016 Ryan Barnes ABSTRACT The composition, absorption, metabolism, and excretion of gallic acid, monogalloyl glucose, and gallotannins in mango (Mangifera indica L.) pulp were investigated. Each galloyl derivative was hypothesized to have a different rate of absorption, and their concentrations were compared in the pulp of five mango varieties. The cultivar Ataulfo was found to have the highest concentration of monogalloyl glucose and gallotannins while the cultivar Kent had the lowest. Enzymatic hydrolysis of gallotannins with tannase led to the characterization of six digalloyl glucoses and five trigalloyl glucoses that have the potential to be formed in the colon following gallotannin consumption. The bioaccessibility of galloyl derivatives was evaluated in both homogenized mango pulp and 0.65 mm3 cubes following in vitro digestion conditions. Monogalloyl glucose was found to be bioaccessible in both homogenized and cubed mango pulp. However, cubed mango pulp had a significantly higher amount of gallotannins still bound to the fruit following digestion. Gallic acid bioaccessibility significantly increased following digestion in both homogenized and cubed mango pulp, likely from hydrolysis of gallotannins. Additionally, for the first time, the absorption of monogalloyl glucose and gallic acid was investigated in both Caco-2 monolayer transport models and a porcine pharmacokinetic model with no significant differences found in their absorption or ability to produce phase II metabolites. -
Nummer 18/17 03 Mei 2017 Nummer 18/17 2 03 Mei 2017
Nummer 18/17 03 mei 2017 Nummer 18/17 2 03 mei 2017 Inleiding Introduction Hoofdblad Patent Bulletin Het Blad de Industriële Eigendom verschijnt The Patent Bulletin appears on the 3rd working op de derde werkdag van een week. Indien day of each week. If the Netherlands Patent Office Octrooicentrum Nederland op deze dag is is closed to the public on the above mentioned gesloten, wordt de verschijningsdag van het blad day, the date of issue of the Bulletin is the first verschoven naar de eerstvolgende werkdag, working day thereafter, on which the Office is waarop Octrooicentrum Nederland is geopend. Het open. Each issue of the Bulletin consists of 14 blad verschijnt alleen in elektronische vorm. Elk headings. nummer van het blad bestaat uit 14 rubrieken. Bijblad Official Journal Verschijnt vier keer per jaar (januari, april, juli, Appears four times a year (January, April, July, oktober) in elektronische vorm via www.rvo.nl/ October) in electronic form on the www.rvo.nl/ octrooien. Het Bijblad bevat officiële mededelingen octrooien. The Official Journal contains en andere wetenswaardigheden waarmee announcements and other things worth knowing Octrooicentrum Nederland en zijn klanten te for the benefit of the Netherlands Patent Office and maken hebben. its customers. Abonnementsprijzen per (kalender)jaar: Subscription rates per calendar year: Hoofdblad en Bijblad: verschijnt gratis Patent Bulletin and Official Journal: free of in elektronische vorm op de website van charge in electronic form on the website of the Octrooicentrum Nederland. -
Generate Metabolic Map Poster
Authors: Pallavi Subhraveti Ron Caspi Quang Ong Peter D Karp An online version of this diagram is available at BioCyc.org. Biosynthetic pathways are positioned in the left of the cytoplasm, degradative pathways on the right, and reactions not assigned to any pathway are in the far right of the cytoplasm. Transporters and membrane proteins are shown on the membrane. Ingrid Keseler Periplasmic (where appropriate) and extracellular reactions and proteins may also be shown. Pathways are colored according to their cellular function. Gcf_900114035Cyc: Amycolatopsis sacchari DSM 44468 Cellular Overview Connections between pathways are omitted for legibility. -
Enzymatic PET Degradation
GREEN AND SUSTAINABLE CHEMISTRY CHIMIA 2019, 73, No. 9 743 doi:10.2533/chimia.2019.743 Chimia 73 (2019) 743–749 © Swiss Chemical Society Enzymatic PET Degradation Athena Papadopoulou§, Katrin Hecht§, and Rebecca Buller* Abstract: Plastic, in the form of packaging material, disposables, clothing and other articles with a short lifespan, has become an indispensable part of our everyday life. The increased production and use of plastic, however, accelerates the accumulation of plastic waste and poses an increasing burden on the environment with negative effects on biodiversity and human health. PET, a common thermoplastic, is recycled in many countries via ther- mal, mechanical and chemical means. Recently, several enzymes have been identified capable of degrading this recalcitrant plastic, opening possibilities for the biological recycling of the omnipresent material. In this review, we analyze the current knowledge of enzymatic PET degradation and discuss advances in improving the involved enzymes via protein engineering. Looking forward, the use of plastic degrading enzymes may facilitate sustain- able plastic waste management and become an important tool for the realization of a circular plastic economy. Keywords: Biocatalysis · Biodegradation · Enzyme engineering · Plastic recycling · PET Dr. Athena Papadopoulou studied Biology 1. Introduction and received her BSc from the University Plastic has become an omnipresent material in our daily life of Ioannina. She completed her MSc in and, as a consequence, the plastic industry has become the seventh Chemistry with a focus on Chemical and most important industry in Europe, employing more than 1.5 mil- Biochemical Technologies. In 2013 she lion people with a turnover of 355 billion Euros in 2017.[1] Plastic moved to Biotechnology group at the production is cheap and the generated plastic items are durable University of Ioannina to pursue her PhD and versatile. -
Generate Metabolic Map Poster
Authors: Zheng Zhao, Delft University of Technology Marcel A. van den Broek, Delft University of Technology S. Aljoscha Wahl, Delft University of Technology Wilbert H. Heijne, DSM Biotechnology Center Roel A. Bovenberg, DSM Biotechnology Center Joseph J. Heijnen, Delft University of Technology An online version of this diagram is available at BioCyc.org. Biosynthetic pathways are positioned in the left of the cytoplasm, degradative pathways on the right, and reactions not assigned to any pathway are in the far right of the cytoplasm. Transporters and membrane proteins are shown on the membrane. Marco A. van den Berg, DSM Biotechnology Center Peter J.T. Verheijen, Delft University of Technology Periplasmic (where appropriate) and extracellular reactions and proteins may also be shown. Pathways are colored according to their cellular function. PchrCyc: Penicillium rubens Wisconsin 54-1255 Cellular Overview Connections between pathways are omitted for legibility. Liang Wu, DSM Biotechnology Center Walter M. van Gulik, Delft University of Technology L-quinate phosphate a sugar a sugar a sugar a sugar multidrug multidrug a dicarboxylate phosphate a proteinogenic 2+ 2+ + met met nicotinate Mg Mg a cation a cation K + L-fucose L-fucose L-quinate L-quinate L-quinate ammonium UDP ammonium ammonium H O pro met amino acid a sugar a sugar a sugar a sugar a sugar a sugar a sugar a sugar a sugar a sugar a sugar K oxaloacetate L-carnitine L-carnitine L-carnitine 2 phosphate quinic acid brain-specific hypothetical hypothetical hypothetical hypothetical -
Generate Metabolic Map Poster
Authors: Pallavi Subhraveti Ron Caspi Peter Midford Peter D Karp An online version of this diagram is available at BioCyc.org. Biosynthetic pathways are positioned in the left of the cytoplasm, degradative pathways on the right, and reactions not assigned to any pathway are in the far right of the cytoplasm. Transporters and membrane proteins are shown on the membrane. Ingrid Keseler Periplasmic (where appropriate) and extracellular reactions and proteins may also be shown. Pathways are colored according to their cellular function. Gcf_000301935Cyc: Acinetobacter baumannii AB_2008-15-52 Cellular Overview Connections between pathways are omitted for legibility. -
(12) United States Patent (10) Patent No.: US 8,911,984 B2 Nakagawa Et Al
USOO891 1984B2 (12) United States Patent (10) Patent No.: US 8,911,984 B2 Nakagawa et al. (45) Date of Patent: Dec. 16, 2014 (54) TANNASE, GENE ENCODING SAME, AND Food Safety Commission, “Safety evaluation standard of additives PROCESS FOR PRODUCING SAME produced in use of genetically modified organisms' determined on Mar. 25, 2004, pp. 1-10. (71) Applicant: Amano Enzyme Inc., Nagoya (JP) Ascención et al., "A novel tannase from Aspergillus niger with (72) Inventors: Megumi Nakagawa, Kakamigahara B-glucosidase activity.” Microbiology, vol. 149, 2003, pp. 2941 2946. (JP): Naoki Matsumoto, Kakamigahara Batra et al., “Potential tannase producers from the genera Aspergillus (JP); Hidoshi Amano, Kakamigahara and Penicillium," Process Biochemistry, vol. 40, 2005, pp. 1553 (JP); Shotaro Yamaguchi, 1557. Kakamigahara (JP) Robert W.-J., “Tannase from Aspergillus awamori: Purification, char (73) Assignee: Amano Enzyme Inc., Nagoya-shi (JP) acter-ization, and the elucidation of the role of tannins in low-ering in vitro protein digestibility of black beans.” Dissertation Abstract. (*) Notice: Subject to any disclaimer, the term of this International B, vol. 50, Bo.7, 1989, p. 2902-2902-B and a cover patent is extended or adjusted under 35 page. U.S.C. 154(b) by 0 days. Sharma et al., “Isolation, purification and properties of tannase from Aspergillus niger van Tieghem.” World Journal of Microbiol. & (21) Appl. No.: 14/088,862 Biotechnol., vol. 15, No. 6, 1999, pp. 673-677 and a cover page. (22) Filed: Nov. 25, 2013 Dhar et al., “Purification, Crystallisation and Physico-Chemical Properties of Tannase of Aspergillus niger," Leather Science, vol. 11, (65) Prior Publication Data No. -
The Use of Immobilized Enzymes in the Food Industry: a Review
C R C Critical Reviews in Food Science and Nutrition ISSN: 0099-0248 (Print) (Online) Journal homepage: http://www.tandfonline.com/loi/bfsn19 The use of immobilized enzymes in the food industry: A review Arun Kilara , Khem M. Shahani & Triveni P. Shukla To cite this article: Arun Kilara , Khem M. Shahani & Triveni P. Shukla (1979) The use of immobilized enzymes in the food industry: A review, C R C Critical Reviews in Food Science and Nutrition, 12:2, 161-198, DOI: 10.1080/10408397909527276 To link to this article: https://doi.org/10.1080/10408397909527276 Published online: 29 Sep 2009. Submit your article to this journal Article views: 73 View related articles Citing articles: 24 View citing articles Full Terms & Conditions of access and use can be found at http://www.tandfonline.com/action/journalInformation?journalCode=bfsn19 Download by: [Texas A&M University Libraries] Date: 09 January 2018, At: 11:05 December 1979 161 THE USE OF IMMOBILIZED ENZYMES IN THE FOOD INDUSTRY: A REVIEW* Authors: ArunKilara** Khem M. Shahani Department of Food Science and Technology University of Nebraska Lincoln, Nebraska Referee: Triveni P. Shukla Krause Milling Company Milwaukee, Wisconsin INTRODUCTION Enzymes are organic substances produced by living cells which catalyze physiologi- cally significant reactions. Enzymes often are defined as biocatalysts, and they possess greater catalytic activity than chemical catalysts. All known enzymes are protein in nature and are generally colloidal, thermolabile, have relatively high molecular weights, exhibit high degrees of stereochemical and substrate specificities, and can usu- ally be isolated from the living cell. There are a wide variety of enzymes which contrib- ute, in part, to the biological diversity observed in nature. -
Kopi Tahun 2004-2008 (355 Judul) Monika Mueller, Alois Jungbauer
Komoditas : Kopi Tahun 2004-2008 (355 judul) Monika Mueller, Alois Jungbauer, Culinary plants, herbs and spices - A rich source of PPAR[gamma] ligands, Food Chemistry, Volume 117, Issue 4, 15 December 2009, Pages 660- 667, ISSN 0308-8146, DOI: 10.1016/j.foodchem.2009.04.063. (http://www.sciencedirect.com/science/article/B6T6R-4W6XW2X- 7/2/9ed5cb42710e57aa0c24c45b5f583cfe) Abstract: Obesity and the related disorders, diabetes, hypertension and hyperlipidemia have reached epidemic proportions world-wide. The influence of 70 plants, herbs and spices on peroxisome proliferators-activated receptor (PPAR)[gamma] activation or antagonism, a drug target for metabolic syndrome, was investigated. Approximately 50 different plant extracts bound PPAR[gamma] in competitive ligand binding assay, including pomegranate, apple, clove, cinnamon, thyme, green coffee, bilberry and bay leaves. Five plant extracts transactivated PPAR[gamma] in chimeric GAL4-PPAR[gamma]-LBD system: nutmeg, licorice, black pepper, holy basil and sage. Interestingly, nearly all plant extracts antagonized rosiglitazone-mediated coactivator recruitment in time resolved fluorescence resonance energy transfer coactivator assay. The five transactivating extracts may function as selective PPAR[gamma] modulators (SPPAR[gamma]Ms), and the other extracts seem to be moderate antagonists or undetectable/weak SPPAR[gamma]Ms. As SPPAR[gamma]Ms improve insulin resistance without weight gain and PPAR[gamma] antagonists exert antiobesity action, a combination of these plants in diet could reduce obesity and the incidence of metabolic syndrome. Keywords: Obesity; PPAR[gamma]; Diabetes; Plants; SPPAR[gamma]Ms; PPAR[gamma]- antagonists R. Dittrich, C. Dragonas, D. Kannenkeril, I. Hoffmann, A. Mueller, M.W. Beckmann, M. Pischetsrieder, A diet rich in Maillard reaction products protects LDL against copper induced oxidation ex vivo, a human intervention trial, Food Research International, Volume 42, Issue 9, November 2009, Pages 1315-1322, ISSN 0963-9969, DOI: 10.1016/j.foodres.2009.04.007. -
12) United States Patent (10
US007635572B2 (12) UnitedO States Patent (10) Patent No.: US 7,635,572 B2 Zhou et al. (45) Date of Patent: Dec. 22, 2009 (54) METHODS FOR CONDUCTING ASSAYS FOR 5,506,121 A 4/1996 Skerra et al. ENZYME ACTIVITY ON PROTEIN 5,510,270 A 4/1996 Fodor et al. MICROARRAYS 5,512,492 A 4/1996 Herron et al. 5,516,635 A 5/1996 Ekins et al. (75) Inventors: Fang X. Zhou, New Haven, CT (US); 5,532,128 A 7/1996 Eggers Barry Schweitzer, Cheshire, CT (US) 5,538,897 A 7/1996 Yates, III et al. s s 5,541,070 A 7/1996 Kauvar (73) Assignee: Life Technologies Corporation, .. S.E. al Carlsbad, CA (US) 5,585,069 A 12/1996 Zanzucchi et al. 5,585,639 A 12/1996 Dorsel et al. (*) Notice: Subject to any disclaimer, the term of this 5,593,838 A 1/1997 Zanzucchi et al. patent is extended or adjusted under 35 5,605,662 A 2f1997 Heller et al. U.S.C. 154(b) by 0 days. 5,620,850 A 4/1997 Bamdad et al. 5,624,711 A 4/1997 Sundberg et al. (21) Appl. No.: 10/865,431 5,627,369 A 5/1997 Vestal et al. 5,629,213 A 5/1997 Kornguth et al. (22) Filed: Jun. 9, 2004 (Continued) (65) Prior Publication Data FOREIGN PATENT DOCUMENTS US 2005/O118665 A1 Jun. 2, 2005 EP 596421 10, 1993 EP 0619321 12/1994 (51) Int. Cl. EP O664452 7, 1995 CI2O 1/50 (2006.01) EP O818467 1, 1998 (52) U.S. -
ABSTRACT SHU, XIAOMEI. Pathogenesis and Host Response
ABSTRACT SHU, XIAOMEI. Pathogenesis and Host Response During Infection of Maize Kernels by Aspergillus flavus and Fusarium verticillioides. (Under the direction of Dr. Gary A. Payne.) Developing maize kernels are vulnerable to colonization by microbes. When colonization allows proliferation of the microbe at the expense of the host, disease occurs. The ascomycete fungal pathogens Aspergillus flavus and Fusarium verticillioides are capable of colonizing maize kernels, causing ear rots and contamination of the kernel with mycotoxins. These diseases lead to significant losses of crop yield and quality, and constitute a threat to food safety and human health. Thus, the significance of these diseases has prompted extensive research efforts to understand these plant-parasite interactions. However, pathogenesis and resistance mechanisms remain poorly characterized, hampering the development of effective control strategies. No commercial maize lines are completely resistant to these fungi. We applied an integrated approach consisting of histology, in situ gene expression and transcriptional profiling to better understand the nature of the interactions that occur between maize kernels and these fungi. Maize inbred line B73 was hand pollinated and inoculated with either A. flavus or F. verticillioides by wounding the kernel with a needle bearing conidia. Histological staining of the kernel sections revealed fungal mycelium in kernels adjacent to the inoculation site by 48 hours post inoculation (hpi), and in all tissues at 96 hpi. Compared with F. verticillioides, A. flavus more aggressively colonized kernel tissue and formed a unique biofilm-like structure around the scutellum. Transcriptome profiling using RNA-sequencing (RNA-seq) coupled with pathway analysis showed that these fungi were recognized by the kernel tissues prior to visible colonization.