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Research xxx (2015) 1e4

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Cretaceous Research

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Discussion A densely feathered ornithomimid (Dinosauria: ) from the Upper Cretaceous Park Formation, Alberta, : A comment

Theagarten Lingham-Soliar

Environmental Sciences, Nelson Mandela Metropolitan University, Summerstrand, Port Elizabeth 6001, South Africa article info abstract

Article history: The presence of feathers in is questioned on poor evidence and a failure to observe sci- Received 25 November 2015 entific process and procedure. Accepted in revised form 4 December 2015 © 2016 Elsevier Ltd. All rights reserved. Available online xxx

Keywords: Ornithomimus Feathers Collagen fibres Biology Taphonomy

1. Introduction establishing rachidial widths of their alleged feathers (innumerable according to the authors reconstructions in figs. 3, 5, 6), the authors van der Reest et al. (2016) describe an Ornithomimus with have provided no statistical measurements. This is conflated by a alleged plumaceous feathers including reconstructions/in- vague reference to the ‘feather’ width range of between 0.2 and terpretations; most of latter will not be considered in any detail in 0.5 mm and to a solitary example “on the body of UALVP 52531 is this commentary for reasons that will become clear in my 0.4 mm laterally (their fig. 4b and c).”This leaves no option but to concluding remarks. I shall, however, examine independently, trust to the bar on their fig. 4 and to try to establish what they where possible, the paleontological evidence behind the authors mean by feathers in the context of width and structure, at least in interpretations. However, findings discussed in this study must not their fig. 4a. The sections in their figure 4b, c, which is considerably be interpreted as antagonistic to the idea of feathered but eroded, will not be considered in any depth because it is based on rather, as in any hypothesis, whether or not they are circumscribed one alleged rachis and on allegations of a “clearly branching by sufficient scientific rigour. ”, based on one v-shaped configuration and another in which the all-important point of origin of the alleged branch is 2. Discussion absent (hence an assumption). Reading between the lines, the authors' interpretation of van der Reest et al. state, “[t]he most common integumentary feathers is based on two criteria, feather rachides 0.2e0.5 mm wide structures are unambiguous feathers comprising filaments that and an internal system of filaments, both of which were at some range from 25 to 87 mm in length and 0.2e0.5 mm in width, pre- point organic. It is possible to see how this interpretation came served as dark carbonaceous imprints surrounding specific por- about (my Fig. 1a). However, to understand why this interpretation tions of the skeleton (Fig. 4).” Most are preserved as dark brown to is fundamentally flawed, first, we need to understand, crucially, the black carbonaceous traces.” Their figure 4, in particular Fig. 4a, is nature of the substrate upon which the integumental structures are indeed the only one in which one can make a reasonable and in- preserved. It is a coarse sandstone substrate that forms a craggy, dependent assessment of the alleged feathers. The dimensions they highly uneven surface (troughs separated by flats or crests), riddled give are a very good place to start. by cracks. Second, we need to know how and why filaments from Measurements may be reasonably interpreted as a defining the ornithomimid were preserved on this surface. The coarse principle of science. Notwithstanding the importance of sandstone substrate probably enabled rapid dehydration of the soft http://dx.doi.org/10.1016/j.cretres.2015.12.001 0195-6671/© 2016 Elsevier Ltd. All rights reserved.

Please cite this article in press as: Lingham-Soliar, T., A densely feathered ornithomimid (Dinosauria: Theropoda) from the Upper Cretaceous Dinosaur Park Formation, Alberta, Canada: A comment, Cretaceous Research (2015), http://dx.doi.org/10.1016/j.cretres.2015.12.001 2 T. Lingham-Soliar / Cretaceous Research xxx (2015) 1e4

Please cite this article in press as: Lingham-Soliar, T., A densely feathered ornithomimid (Dinosauria: Theropoda) from the Upper Cretaceous Dinosaur Park Formation, Alberta, Canada: A comment, Cretaceous Research (2015), http://dx.doi.org/10.1016/j.cretres.2015.12.001 T. Lingham-Soliar / Cretaceous Research xxx (2015) 1e4 3 tissue () soon after the animal's death thereby avoiding fibre i.e. the authors' make no effort to provide alternative scenarios that swelling in different stages of decay (it is impossible to tell whether might falsify their conclusions. The functional significance of stains or not these are part of larger bundles). Furthermore, the coarse- as opposed to knobs (as in modern and ) has grained sandstone substrate may have helped drain away en- not been explained. The parsimonious explanation is that these are zymes of decay and suppurating fluids that may speed up the pigment impressions from the decaying epidermis as seen in a processes of decay (Schweitzer, 2003; Lingham-Soliar and Glab, dolphin and (Lingham-Soliar and Plodowski 2010; 2010). We may presume that the fibres as a consequence have not Fig. 1c and 1gek resp.). In Psittacosaurus the pigment stains suffered severe microbial decay. (including on the ulna) take on a variety of shapes dependent on van der Reest et al. are, however, only half right with respect to the structures/partial structures in the overlying epidermis but if the integumentary structures. Here, Fig. 1b(SI Fig. 1, rectangle 1), one was to interpret them as marking the sites of the calami, they shows a cavity that is clearly part of the topography of the substrate are resoundingly more impressive than the muted stains in Orni- (also seen in a number of different parts of the section in SI Fig. 1) thomimus, perhaps facilitated by the high quality of soft tissue i.e. part of the inorganic sandstone substrate whereas they are preservation and highly pigmented nature of the Jehol's Psittaco- associated with ‘internal’ filaments (~50 mm diameter) that were saurus. However, they are also preserved on the ribs, scapula, etc. of originally organic, clearly falsifying the hypothesis of rachides. The Psittacosaurus, precluding in this case any possible misinterpreta- extreme filament contortions and ready ability to separate into tion of calami insertions points. individual strands are a clue to their chemistry. Figures 3, 5 and 6 (van der Reest et al., 2016) are extremely poor Unlike in some preservations, the filaments in the authors' fig. quality images from which the authors purport to distinguish 4a are fairly uniform in diameter (~50 mm). The fibres also show a feathers. While it is barely possible to discern some kind of fila- typical collagenous feature of beading, which is a feature of dehy- mentous structures in these figures, the poor quality makes no dration and crimping or slight contractions along the fibre length meaningful independent analysis possible. Thus it is impossible to when muscle tone in the tissue is lost (Lingham-Soliar, 2003; falsify the interpretive drawings by van der Reest et al. (2016). The Lingham-Soliar and Glab, 2010). The troughs (marked frequently only area that I have been able to enlarge meaningfully from these by being a sinkhole for pigment/carbon/iron-oxide; see Lingham- figures is in the authors' fig. 3, an area not included in their inter- Soliar and Plodowski, 2010) and ridges have acted to redirect the pretative drawing. It shows what appears to be a cross-fibre ar- collagen fibres. The latter are highly malleable when muscle tone is chitecture (SI fig. 2) of regularly oriented filaments that is lost and capable of following the shape of underlying structures as reminiscent of the dermis in many including Sino- the fibres are pressed down. It is possible to see how readily sauropteryx (Lingham-Soliar, 2011*, 2012). These closely adjoin the collagen fibres are separated and deflected from their original authors depicted more variously oriented ‘feathers’ from consid- geometrical crossed-fibre patterns in the skin of a decaying dol- erably more blurry parts of the photo. However, more general re- phin, where they follow the course of the ribs and in histological marks will be made in my conclusions below. preparations of shark skin (Lingham-Soliar, 2003, 2005; Fig. 1c, *It was shown that highly irregularly-shaped degraded material d resp.). Similar deflections or diversions are frequently seen in van in had no resemblance to phaeomelanosomes der Reest's fig. 4a, initiated by even the slightest obstacles (see SI for (once thought to be irrefutable evidence of feathers in the animal) details e.g. rectangular boxes) frequently with the filaments sepa- whatsoever and subsequently questioned by other workers rating into single strands emphasizing that whatever bonds that (Manning et al., 2013; Lindgren et al., 2015). exist between adjacent fibres, they are weak as e.g. in collagen b (Fig. 1d). They are in striking contrast to -, the toughest, 3. Conclusions natural fibre known with a limited degree of elasticity and con- fi ‘ ’ a structed of internal bres that are glued by a tough amorphous - The hypothesis of feathers in Ornithomimus lacks sufficient sci- keratin matrix (we have shown that it takes years of microbial entific rigour and depends wholly on confirmation. Mahoney degradation under ideal conditions to degrade and even then the (1977) drew attention to the fundamentally illogical nature of fi laments are arrow-straight (Lingham-Soliar et al., 2010; Fig. 1e, confirmatory bias, which we see amply demonstrated in van der fl F)). On the other hand where the substrate surface may be fairly at Reest et al. (2016), i.e. the tendency to emphasize and believe ex- fi (SI Fig. 1, curved bracket adjacent to arrow 1) a wide band of bres periences that support one's views and to ignore or discredit those ‘ ’ fl (~1.5 mm) can be seen without the channelling and de ections that do not. The definition of science is that it should be testable fi seen elsewhere. The lament characteristics and biomechanics and capable of being falsified (Popper, 1959) as opposed to ver- b fi have little factual resemblance to avian -keratin bres (Lingham- ificationist systems. Let us look at the authors findings in this Soliar et al., 2010; Lingham-Soliar and Murugan, 2013; Lingham- context: i) the authors state that the integumentary structures are Soliar, 2014, 2015). “unambiguous feathers” without feeling the need to consider why “ Next, the authors state, [t]he other and more complete adult [of they might not be or consider an alternative, collagen for example; Ornithomimus] has oblique carbonaceous markings on the ulna and ii) the authors give ‘feather ‘ widths of 0.2e0.5 mm without basic radius that are interpreted by Zelenitsky et al. (2012) as attachment statistics from any of the figures, thus lacking any significance, ” traces for the calami of pennaceous feathers with which they given the fundamental importance of such measurements; iii) concur, despite the absence of quill knobs. Given, that these are no despite the substrate surface being highly craggy and cracked (fig. more than stains without even a trace of depressions, both sets of 4a) the authors see no other explanation for the troughs than that fi authors' conclusions are untested and suffer from con rmatory bias they are feather rachides (0.2e0.5 mm wide); iv) their

Fig. 1. Collagen, b-keratin and pigment. (a) Detail of collagen fibres impressed upon part of the ‘craggy’ surface in van der Reest et al.'s (2016) fig. 4. (b) A section near the top edge showing crevices in the sandstone and collagen filaments. (c) Histological section of collagen fibre bundle from shark dermis showing a few fibres teased away as well as the beaded appearance (d) and inset of decaying dolphin (about 3 months) showing collagen fibres being reoriented along the ribs. (e) (f) b-keratin after several years of complete microbial degradation of the binding matrix, while still retaining the rigidity and compactness. (f) in other parts the matrix was only partly degraded to show to show how tightly bonded the fibres are. (gek) Pigment impressions. (g) humerus, radius, ulna, and ribs. (h) Ribs. (i) Radius and ulna. (j) Femur. (k) Left humerus. (l) Ichthyosaur soft tissue above neural spines showing numerous collagen fibres that had associated with others to form branch-like structures during the animal's taphonomic history.

Please cite this article in press as: Lingham-Soliar, T., A densely feathered ornithomimid (Dinosauria: Theropoda) from the Upper Cretaceous Dinosaur Park Formation, Alberta, Canada: A comment, Cretaceous Research (2015), http://dx.doi.org/10.1016/j.cretres.2015.12.001 4 T. Lingham-Soliar / Cretaceous Research xxx (2015) 1e4 interpretation of a solitary v-shaped structure as a branched feather Acknowledgements considers no other explanation e.g. taphonomy (see v-shaped fila- ments in ichthyosaur skin, Fig. 1l); v) the authors see no contra- The study is supported by National Research Foundation, South diction to their unambiguous feather hypothesis namely in the Africa. highly malleable nature of the filaments that mould themselves to extreme contours and curves, which is consistent with collagen but inconsistent with b-keratin, even during decay; vi) the authors see References no reason to explain how keratin filaments separate into single strands with such ease (see above and SI Fig. 3); vii) the authors fail Currie, P.J., Chen, P.-J., 2001. of Sinosauropteryx prima from Liaoning, e to explain the crimping of the filaments to produce ‘beads’ when northeastern . Canadian Journal of Earth Sciences 38, 1705 1727. Lindgren, J., Moyer, A., Schweitzer, M.H., et al., 2015. Interpreting -based tension is lost, which has consistently been associated with coloration through deep time: a critical review. Proceedings of the Royal So- collagen fibres. ciety, London B 282 (1813), 20150614. There is also, perhaps requiring the strongest criticism of all, a Lingham-Soliar, T., 2003. The dinosaurian origin of feathers: perspectives from dolphin (Cetacea) collagen fibres. Naturwissenschaften 90, 563e567. general breakdown in scientific protocol in the paper by van der Lingham-Soliar, T., 2005. Caudal fin in the white shark, Carcharodon carcharias Reest et al. (2016). With respect to their figures 3, 5 and 6 the au- (Lamnidae): a dynamic propeller for fast, efficient swimming. Journal of e thors produce interpretive drawings. On the other hand their Morphology 264, 233 252. http://dx.doi.org/10.1002/jmor.10328. Lingham-Soliar, T., 2011. The of the feather: Sinosauropteryx, a colourful respective photos are of such poor quality (lacking even a single . Journal of 152, 567e577. http://dx.doi.org/10.1007/s10336- detailed image), that it generally precludes an independent anal- 010-0620-y. ysis. The Council of Biology Editors (CBE), an authoritative profes- Lingham-Soliar, T., 2012. The evolution of the feather: Sinosauropteryx, life, death fi fi and preservation of an alleged . Journal of Ornithology 153, sional organization (in biology, at least) de ned a primary scienti c 699e711. http://dx.doi.org/10.1007/s10336-011-0787-x2013. publication as the first disclosure “containing sufficient [my itali- Lingham-Soliar, T., 2014. Feather structure, biomechanics and biomimetics: the zation] information to enable peers (1) to assess observations, (2) to incredible lightness of being. Journal of Ornithology 155, 323e336. http:// dx.doi.org/10.1007/s10336-013-1038-0. repeat experiments, and (3) to evaluate intellectual processes. Lingham-Soliar, T., 2015. The Integument Volume 2. Springer, There is no proviso for “the appeal to authority” that precludes Heidelberg. scientific assessment by peers. A paper is under review not an Lingham-Soliar, T., Bonser, R.H.C., Wesley-Smith, J., 2010. Selective biodegradation fi of keratin matrix in feather rachis reveals classic bioengineering. Proceedings of authors' knowledge or experience (even if greater) etc. Scienti c the Royal Society, London B 277, 1161e1168. http://dx.doi.org/10.1098/ papers are the way we communicate science and its persuasiveness rspb.2009.1980. must lie entirely in what is contained within the paper's pages Lingham-Soliar, T., Glab, J., 2010. Dehydration: a mechanism for the preservation of fi (figures and data). An independent assessment cannot be made of ne detail in fossilised soft tissue of ancient terrestrial animals. Palae- ogeography, Palaeoclimatology, Palaeoecology 291, 481e487. http://dx.doi.org/ van der Reest et al.'s interpretive drawings without adequate 10.1016/j.palaeo.2010.03.019. photos or, it becomes an “appeal to authority.” This kind of major Lingham-Soliar, T., Murugan, N., 2013. A new helical crossed-fiber structure of b- fl scientific failing goes back at least 15 years in this field e.g. when keratin in ight feathers and its biomechanical implications. PLoS One 8 (6), 1e12 e65849. Currie and Chen (2001) produced subjective inky outlines of Lingham-Soliar, T., Plodowski, G., 2010. The integument of Psittacosaurus from integumental structures that are meant to represent no less Liaoning Province, China: taphonomy, epidermal patterns and color of a cera- important structures than branched feathers. Most deserving of topsian dinosaur. Naturwissenschaften 97, 479e486. fi “ fi Mahoney, M.J., 1977. Publication prejudices: an experimental study of con rmatory censure, however, in that same study was, [u]nder magni cation, bias in the peer review system. Cognitive Therapy and Research 1 (2), 161e175. the margins of the larger structures arc darker along the edges but Manning, P.L., Edwards, N.P., Wogelius, R.A., et al., 2013. Synchrotron-based light medially, which suggests that they may have been hollow.” chemical imaging reveals plumage patterns in a 150 million year old early . Journal of Analytical Atomic Spectrometry 28 (7), 1024e1030. They did not produce the evidence though and yet their untested Popper, K.R., 1959. The Logic of Scientific Discovery. Basic Books, New York. comments stand to this day for one of the most crucial features of van der Reest, A.J., Wolfe, A.P., Currie, P.J., 2016. A densely feathered ornithomimid real feathers, hollowness. What was clearly needed was close-up (Dinosauria: Theropoda) from the Upper Cretaceous Dinosaur Park Formation, Alberta, Canada. Cretaceous Research 58 (2016), 108e117. microphotographic evidence so that an independent analysis of Schweitzer, M.H., 2003. Reviews and previews: the future of molecular biology. what the authors' claimed to see in their paper could be made by Palaeontologia Electronica 5 (2), 1e11. http://palaeo-electronica.org. peers. They are hearsay evidence and an “appeal to authority,” Zelenitsky, D.K., Therrien, F., Erickson, G.F., DeBuhr, C.L., Kobayashi, Y., Eberth, D.A., which is recorded here to emphasize how little has changed to the et al., 2012. Feathered non-avian dinosaurs from North America provide insight into wing origins. Science 338, 510e514. present day. van der Reest et al. (2016) demonstrate a spectacular failure to appreciate both the biological predictabilities of organic structures Appendix A. Supplementary data and the idiosyncrasies of taphonomy, confounded by a clear lack of fi attention to scienti c procedure. Their study does not bode well for Supplementary data related to this article can be found at http://dx.doi.org/10. similar claims on Ornithomimus by Zelenitsky et al. (2012). 1016/j.cretres.2015.12.001.

Please cite this article in press as: Lingham-Soliar, T., A densely feathered ornithomimid (Dinosauria: Theropoda) from the Upper Cretaceous Dinosaur Park Formation, Alberta, Canada: A comment, Cretaceous Research (2015), http://dx.doi.org/10.1016/j.cretres.2015.12.001 Cretaceous Research xxx (2016) 1e5

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Cretaceous Research

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Discussion Reply to comment on: “A densely feathered ornithomimid (Dinosauria: Theropoda) from the Upper Cretaceous Dinosaur Park Formation, Alberta, Canada”

* Aaron J. van der Reest , Alexander P. Wolfe, Philip J. Currie

Department of Biological Sciences, University of Alberta, Edmonton, AB T6G 2E9, Canada article info abstract

Article history: We confirm the presence of pigmented keratinized integumentary structures attributable to feathers in Received 29 December 2015 the Late Cretaceous Ornithomimus specimen UALVP 52531. We falsify the hypothesis that these features Received in revised form represent collagen fibers and address additional criticisms of our paper made by Lingham-Soliar (2016). 19 January 2016 © 2016 Elsevier Ltd. All rights reserved. Accepted in revised form 20 January 2016 Available online xxx

Keywords: Ornithomimus Cretaceous Feathers Collagen FTIR Dinosaur Park Formation

1. On measurement and scale both anonymous reviewers and the editorial office of Cretaceous Research. Moreover, this scale bar is consistent with, and enables We welcome the opportunity to address comments made by confirmation of, the filament dimensions reported in the text of van Lingham-Soliar (2016) on the integumentary structures associated der Reest et al. (2016). As can be seen in Figs. 1B and C, there are with UALVP 52531, a recently described Ornithomimus from the many more than a “solitary example” of the two filament pop- Late Cretaceous of Alberta, Canada (van der Reest et al., 2016). We ulations observed. There are numerous fine elements branching first address the issues of measurement and scale, stated bluntly by from more robust structures that are interpreted as feather rami Lingham-Soliar (2016) as “a vague reference to the ‘feather’ width and rachises, respectively. There is no evidence of feather barbule range of between 0.2e0.5 mm and to a solitary example on the preservation in UALVP 52531. As stated, the detailed analyses of the body of UALVP 52531 that is 0.4 mm” followed shortly thereafter by microstructure and chemistry of preserved integumentary features “This leaves no option but to trust the scale bar on their Fig. 4 and are forthcoming, but we can specify that these two filament pop- try to establish what they mean by feathers in the context of width ulations have dimensions of 49 ± 9 mm (range: 30e60 mm, n ¼ 79) and structure.” In no manner are our measurements or illustrated and 253 ± 66 mm (range: 110e450 mm, n ¼ 81). We thank Lingham- scale bars lacking in accuracy or precision. To make this point clear, Soliar (2016) for requesting this information and acknowledge our in Fig. 1 of this rebuttal Figs. 1AeC are reproduced from the original omission, but we emphasize that the data and illustrations pre- alongside the unedited photograph of the specimen in question sented by van der Reest et al. (2016) are correct, and that our with ruler in place (Fig. 1D). Simply stated, there is nothing interpretation of UALVP 52531 remains unchanged. remotely disingenuous or deceptive about this scale bar, or any of the others presented by van der Reest et al. (2016). Indeed, these 2. Feathers adorning UALV 52531 illustrations were deemed satisfactory, as initially submitted, to On page 109 of van der Reest et al. (2016) we wrote: “The most common integumentary structures are unambiguous feathers fi e * Corresponding author. comprising laments that range from 25 87 mm in length and E-mail address: [email protected] (A.J. van der Reest). 0.2e0.5 mm in width, preserved as dark carbonaceous imprints http://dx.doi.org/10.1016/j.cretres.2016.01.005 0195-6671/© 2016 Elsevier Ltd. All rights reserved.

Please cite this article in press as: van der Reest, A.J., et al., Reply to comment on: “A densely feathered ornithomimid (Dinosauria: Theropoda) from the Upper Cretaceous Dinosaur Park Formation, Alberta, Canada”, Cretaceous Research (2016), http://dx.doi.org/10.1016/ j.cretres.2016.01.005 2 A.J. van der Reest et al. / Cretaceous Research xxx (2016) 1e5

Fig. 1. Keratinous integument and collagen fibers. (AeC) Direct reproduction of Fig. 4 from van der Reest et al. (2016), with the following additions: measurements of coarse (rachises) and fine (rami) feather elements in (B) and (C), and shading of the fractured vertical margin of the specimen that was edited from the original (D) in order to restrict (A) to surfaces in focus. (D) The original unedited photograph that became Fig. 4A, where the ruler on left is the basis for the digital scale, identical as that in (A). The digital scale is slightly longer that the photographed ruler in order to compensate for specimen height. (E) Surface and fracture margin of one of the “dark carbonaceous imprints” from the ilium of UALVP 52531 observed with field-emission scanning electron microscopy (FE-SEM). The mm-scale bacilloid shapes are . (F) Comparable features, at the same scale as (E), from a rufous tail feather of Buteo jamaicensis (red-tailed ) digested brieflyin1MNa2S. In (G) and (H) are FE-SEM images of collagen fibers extracted from a Middle Pleistocene Mammuthus primigenius pelvis, ~600 ka in age, from the Yukon Territory and buried in frozen ground (Dominion Creek locality, Klondike gold fields, 63460N, 138320W). Each fiber has a diameter 15 mm, and is comprised of much finer (<1 mm) fibrils. The finest carbonaceous elements in UALVP 52531 measure 30 mm in diameter, but average 49 ± 9 mm, much wider than the coarsest collagen fibers, as shown by comparison of (B) and (C) to (G) and (H). (For interpretation of the references to color in this figure legend, the reader is referred to the web version of this article.)

Please cite this article in press as: van der Reest, A.J., et al., Reply to comment on: “A densely feathered ornithomimid (Dinosauria: Theropoda) from the Upper Cretaceous Dinosaur Park Formation, Alberta, Canada”, Cretaceous Research (2016), http://dx.doi.org/10.1016/ j.cretres.2016.01.005 A.J. van der Reest et al. / Cretaceous Research xxx (2016) 1e5 3 surrounding specific portions of the skeleton.” What we failed to between , in addition to representing the most abundant convey in this sentence, perhaps leading to some of the objections in bone (Asara et al., 2007). This level of conservedness has of Lingham-Soliar (2016), is that our claims are neither flippant nor been exploited before in drawing inferences from mammalian, unsubstantiated. Rather, this sentence and the associated images reptilian, and elasmobranch collagen that potentially bear on distil a large amount of hands-on research addressing UALVP 52531 integumentary structures of dinosaurs (Lingham-Soliar, 2003; (mainly by AvdR and APW), while simultaneously benefitting from Feduccia et al., 2005). Field-emission SEM of collagen fibers from one of us (PJC) having almost two decades of experience inter- mammoth (Figs. 1G, F) reveal structures of much smaller diameter preting theropod integumentary structures from localities with (<25 mm) than even the thinnest filaments preserved as carbona- exceptional preservation (e.g., Ji et al., 1998). When we began ceous structures on UALVP 52531. These dimensions overlap writing the manuscript (summer-autumn 2015), we had pre- collagen fibers from various extant , whereas homologous liminary inklings from field-emission scanning electron micro- structures extracted from hadrosaur bone are even finer scopy (FE-SEM) that the integument of UALVP 52531 was (Schweitzer et al., 2009). On the other hand, the diameter of consistent with pigmented keratin. The results were deemed collagen fibers does overlap with those of barbules from Late insufficient for inclusion in the paper at that time, although sub- Cretaceous bird and dinosaur feathers preserved in amber sequent work supports the interpretation of feathers, including (McKellar et al., 2011). However, barbules possess distinctive nodes extensive comparisons with modern avian material as well as and internodes that produce segmented structures, whereas ongoing chemical analyses using Fourier transform infrared spec- collagen fibers comprise bundles of slightly whorled fibrils that are troscopy (FTIR) and time of flight-secondary ion mass spectrometry considerably more flexible (Fig. 1G). In FTIR spectroscopy, the (ToF-SIMS). Much of the “dark carbonaceous material” surrounding mammoth collagen fibers resemble neither UALVP 52531 integu- the dorsal margin of UALVP 52531 has densely packed melano- ment nor avian feather or cuttlefish ink, most notably by the somes (melanin containing organelles) that are homologous to absence of carbonyl absorbance bands (Fig. 2). Summarily, we those observed in modern bird feathers (Figs. 1E, F). In both cases, remain unable to falsify the hypothesis that the integumentary the melanosomes are intimately associated with sheets of b-kera- structures in UALVP 52531 represent feathers, while effectively tin. While melanosomes from feather (American crow) dismissing collagen fibers as a candidate for any of the observations retain a distinct fabric with preferential long-axis orientation, those made by van der Reest et al. (2016). We also note that in one of our of UALVP 52531 appear randomly oriented, and are furthermore images reproduced by Lingham-Soliar (2016, Supplemental Fig. 2), more variable with respect to size and shape. Importantly, in marks created during preparation using pneumatic scribes have neither case is there any evidence of cellular division, which would been mistaken for primary structures. Had we been contacted with be expressed as medial constrictions and would signify a bacterial a request for detailed images of the region, it would have been origin for these structures. evident as to what these marks truly represented. Furthermore, a Compositionally, provisional FTIR spectra (Fig. 2) reveal that the simple comparison to the line drawing associated with the original integumentary structures in UALVP 52531 are highly overprinted figure clearly illustrates what is matrix and is not matrix. Had the with mineral phases, as expected for any geological sample. How- line drawing been consulted, it would have been clear that other ever, the material retains moderately strong expressions of the structures suggested as possible collagen are in fact the dorsal alkane CH doublet (2850 cm 1 and 2930 cm 1), which denotes margin of both ilia and the neural spine of the posterior sacral hydrocarbon side chains on the backbone, and thus con- vertebrae. These facts clearly illustrate the importance of request- firms the survival of parts of the material’s original organic chem- ing high resolution images (which may not always be published istry. The other organic bands that are strongly expressed in the due to file size, or page limitation) or to personally view specimens UALVP 52531 samples are those associated with carbonyl func- for confirmation of reported characters and structures. tional groups (C¼O) at 1400 cm 1 and 1580 cm 1, which confirm the presence of carboxylic acids. These peaks are also prominent in 4. Conclusion the FTIR spectra of black crow feathers and cuttlefish ink (Fig. 2CeD), and most likely relate to the presence of dihydrox- While we respect the spirit of exploration for alternative in- yindole carboxylic acid (DHICA), an essential building block of the terpretations (Lingham-Soliar 2016), collagen preservation is black pigment eumelanin. extremely rare in the Mesozoic record (Schweitzer et al., Through the combination of microscopic and spectroscopic 2007; Schweitzer, 2011), and almost certainly less common than analyses, the integumentary vestiges of UALVP 52531 can be the preservation of feather keratin (Norell and Xu, 2005), which confidently identified as melanosomes within a keratin matrix, itself is restricted to relatively few localities. In a general sense, the which bolsters the original interpretation of feather preservation preservation potential of keratin is higher than that of integum- on this specimen. Even in light of the stringent criteria presented by etary non-apatitic collagen because of the more hydrophobic Moyer et al. (2014),wefind no evidence that these structures character of cross-linkages involving non-polar amino acids in represent vestiges of extracellular bacterial biofilms. We surmise, keratin, which effectively exclude water at the cellular loci of ker- from the combination of what we knew at the time of writing and atin synthesis and maturation (Schweitzer, 2011). A similar what we know now, that the admittedly strong wording of “un- conclusion can be reached by comparing and collagens ambiguous feathers” in van der Reest et al. (2016) remains entirely from a materials science perspective (Meyers et al., 2008). How- appropriate with respect to the observations. ever, in the exceptional instances where intact dinosaur collagen has been recovered from multiple specimens entombed in rapidly- 3. Collagen matters deposited sandstone, the resulting sequences for collagens a1 type I and a2 type I obtained by mass spectrometry appear to confirm the Collagen fibers do not represent an adequate interpretation for monophyly of dinosaurs and birds (Schweitzer et al., 2009). The the integument of UALVP 52531. We extracted collagen fibers from exact same conclusion can be drawn from fossil feathers and Pleistocene mammoth pelvic bone by sequential decalcification, feather-like integumentary structures, bolstered by an additional gelatinization, and ultrafiltration, following the protocol of suite of anatomical synapomorphies discussed by van der Reest Beaumont et al. (2010). While mammoths and dinosaurs are clearly et al. (2016) among many other authors (e.g., Ostrom, 1976; not the same, collagens are remarkably conserved across and Wagner and Gauthier, 1999; Vargas and Fallon, 2005). While we

Please cite this article in press as: van der Reest, A.J., et al., Reply to comment on: “A densely feathered ornithomimid (Dinosauria: Theropoda) from the Upper Cretaceous Dinosaur Park Formation, Alberta, Canada”, Cretaceous Research (2016), http://dx.doi.org/10.1016/ j.cretres.2016.01.005 4 A.J. van der Reest et al. / Cretaceous Research xxx (2016) 1e5

Fig. 2. Fourier transform infrared (FTIR) spectra. Absorbance spectra were collected from pulverized samples embedded in KBr using a Thermo Nicolet 8700 FTIR spectrometer. (AeB) Black carbonized integumentary structures from the ilium of UALVP 52531. (C) Rami from a black primary feather of Corvus brachyrhynchos (American crow). (D) Sepia officinalis (common cuttlefish) ink, a common standard for eumelanin. (E) Collagen fibers extracted from Pleistocene woolly mammoth (Mammuthus primigenius). Gray vertical lines indicate bands of interest discussed in the text. are sensitive to alternate hypotheses that postulate more distant inconsistent with such interpretations. Moreover, the extension of phylogenetic relationships between dinosaurs and birds (Feduccia Lingham-Soliar's (2016) critique of our work towards that of and Wild, 1993), and to the crucial role played by the diagnosis of Zelenitsky et al. (2012) is neither scientifically nor professionally integumentary structures in this debate (Jones et al., 2000; justified. UALVP 52531 supports wholly the earlier publication of Feduccia et al., 2005), the observations from UALVP 52531 remain feathered ornithomimids from the Dinosaur Park Formation, while

Please cite this article in press as: van der Reest, A.J., et al., Reply to comment on: “A densely feathered ornithomimid (Dinosauria: Theropoda) from the Upper Cretaceous Dinosaur Park Formation, Alberta, Canada”, Cretaceous Research (2016), http://dx.doi.org/10.1016/ j.cretres.2016.01.005 A.J. van der Reest et al. / Cretaceous Research xxx (2016) 1e5 5 adding new dimensions to the quality of preservation that exists McKellar, R.C., Chatterton, B.D.E., Wolfe, A.P., Currie, P.J., 2011. A diverse assemblage within these remarkable sediments. of late cretaceous dinosaur and bird feathers from Canadian amber. Science 333, 1619e1622. Meyers, M.A., Chen, P.-Y., Lin, A.Y.-M., Seki, Y., 2008. Biological materials: structure Acknowledgments and mechanical properties. Progress in Materials Science 53, 1e206. Moyer, A.E., Zheng, W., Johnson, E.A., Lamanna, M.C., Li, D.Q., Lacovara, K.J., Schweitzer, M.H., 2014. Melanosomes or microbes: testing an alternative hy- Research was funded by the Natural Sciences and Engineering pothesis for the origin of microbodies in fossil feathers. Scientific Reports 4. Research Council of Canada (Discovery Awards to APW and PJC). http://dx.doi.org/10.1038/srep04233. Wayne Moffat (Department of Chemistry, University of Alberta) is Norell, M.A., Xu, X., 2005. Feathered dinosaurs. Annual Review of Earth and Plan- etary Sciences 33, 277e299. thanked for assistance with FTIR spectroscopy. Ostrom, J.H., 1976. and the . Biological Journal of the Linnean Society 8, 91e182. References van der Reest, A.J., Wolfe, A.P., Currie, P.J., 2016. A densely feathered ornithomimid (Dinosauria: Theropoda) from the Upper Cretaceous Dinosaur Park Formation, Alberta, Canada. Cretaceous Research 58, 108e117. Asara, J.M., Schweitzer, M.H., Freimark, L.M., Phillips, M., Cantley, L.C., 2007. Protein Schweitzer, M.H., 2011. Soft tissue preservation in terrestrial mesozoic vertebrates. sequences from mastodon and rex revealed by mass spectrom- Annual Review of Earth and Planetary Sciences 39, 187e216. etry. Science 316, 280e285. Schweitzer, M.H., Suo, Z., Avci, R., Asara, J.M., Allen, M.A., Arce, F.T., Horner, J.R., 2007. Beaumont, W., Beverly, R., Southon, J., Taylor, R.E., 2010. Bone preparation at the Analysis of soft tissue from Tyrannosaurus rex suggest the presence of protein. KCCAMS laboratory. Nuclear Instruments and Methods in Physics Research B Science 316, 277e280. 268, 906e909. Schweitzer, M.H., Zheng, W., , C.L., Avci, R., Suo, Z., Freimark, L.M., Lebleu, V.S., Feduccia, A., Wild, R., 1993. Birdlike characters in the Triassic Mega- Duncan, M.B., Vander Heiden, M.G., Neveu, J.M., Lane, W.S., 2009. Biomolecular lancosaurus. Naturwissenschaften 80, 564e566. characterization and protein sequences of the Campanian hadrosaur Feduccia, A., Lingham-Soliar, T., Hinchliffe, J.R., 2005. Do feathered dinosaurs exist? B. canadensis. Science 324, 626e631. Testing the hypothesis on neontological and paleontological evidence. Journal Vargas, A.O., Fallon, J.F., 2005. Birds have dinosaur wings: the molecular evidence. of Morphology 266, 125e166. Journal of Experimental Zoolology Part B Molecular and Developmental Evo- Ji, Q., Currie, P.J., Norell, M.A., Ji, S.-A., 1998. Two feathered dinosaurs from north- lution 304, 86e90. eastern China. Nature 393, 753e761. Wagner, G.P., Gauthier, J.A., 1999. 1,2,3 ¼ 2,3,4: a solution to the problem of the Jones, T.D., Ruben, J.A., Martin, L.D., Kurochkin, E.N., Feduccia, A., Maderson, P.F., of the digits in the avian hand. Proceedings of the National Academy Hillenius, W.J., Geist, N.R., Alifanov, V., 2000. Nonavian feathers in a late Triassic of Sciences USA 96, 5111e5116. archosaur. Science 288, 2202e2205. Zelenitsky, D.K., Therrien, F., Erickson, G.F., DeBuhr, C.L., Kobayashi, Y., Eberth, D.A., Lingham-Soliar, T., 2003. The dinosaurian origin of feathers: perspectives from Hadfield, F., 2012. Feathered non-avian dinosaurs from North America provide dolphin (Cetacea) collagen fibers. Naturwissenschaften 90, 563e567. insight into wing origins. Science 338, 510e514. Lingham-Soliar, T., 2016. A densely feathered ornithomimid (Dinosauria: Ther- opoda) from the Upper Cretaceous Dinosaur Park Formation, Alberta, Canada: a comment. Cretaceous Research 58 (in this issue).

Please cite this article in press as: van der Reest, A.J., et al., Reply to comment on: “A densely feathered ornithomimid (Dinosauria: Theropoda) from the Upper Cretaceous Dinosaur Park Formation, Alberta, Canada”, Cretaceous Research (2016), http://dx.doi.org/10.1016/ j.cretres.2016.01.005