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Table S3. Differential Expression in Gill Tissue from Arctic Charr (Salvelinus Alpinus) Family 12 After Transfer from Freshwater to Seawater

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Table S3. Differential Expression in Gill Tissue from Arctic Charr (Salvelinus Alpinus) Family 12 After Transfer from Freshwater to Seawater Table S3. Differential expression in gill tissue from Arctic charr (Salvelinus alpinus) family 12 after transfer from freshwater to seawater. AC gill Expression BLASTX alignment Count Contig ID P Log2(ER) Sequence description % ID E-Value Score 1 510543 < 1.0E-15 8.7 gi_12805155, AAH02035.1, Unknown (protein for MGC:5947) [Mus musculus] 100 1.35E-135 394 2 323017 < 1.0E-15 8.0 gi_213513042, NP_001134270.1, fucosyltransferase 9 [Salmo salar] >gi_209731992, ACI66865.1, 92 4.79E-42 161 Alpha-1,3-fucosyltransferase [Salmo salar] 3 499923 < 1.0E-15 7.9 gi_197631823, ACH70635.1, cytochrome c-like [Salmo salar] >gi_209738490, ACI70114.1, Cytochrome 98 8.02E-64 213 c [Salmo salar] >gi_221219870, ACM08596.1, Cytochrome c [Salmo salar] >gi_221220596, ACM08959.1, Cytochrome c [Salmo salar] >gi_225703780, ACO07736.1, Cytochrome c [Oncorhynchus mykiss] >gi_225705644, ACO08668.1, Cytochrome c [Oncorhynchus mykiss] >gi_303660333, ADM15993.1, Cytochrome c [Salmo salar] 4 99748 < 1.0E-15 7.6 gi_348545563, XP_003460249.1, PREDICTED: hypothetical protein LOC100708591 [Oreochromis 67 2.78E-157 479 niloticus] 5 41921 < 1.0E-15 6.7 gi_209737600, ACI69669.1, Caspase-14 precursor [Salmo salar] 75 1.48E-52 189 6 225544 < 1.0E-15 6.4 gi_83312446, YP_422710.1, Calphotin; microtubule-associated protein 4 [Magnetospirillum magneticum 70 7.52E-05 55 AMB-1] >gi_82947287, BAE52151.1, Calphotin; Microtubule-associated protein 4 [Magnetospirillum magneticum AMB-1] 7 151773 < 1.0E-15 6.3 gi_348517158, XP_003446102.1, PREDICTED: kallikrein-2-like [Oreochromis niloticus] 50 3.49E-28 118 8 293079 < 1.0E-15 6.3 gi_301607131, XP_002933173.1, PREDICTED: hypothetical protein LOC100488659 [Xenopus (Silurana) 56 4.17E-25 64 tropicalis] 9 604942 < 1.0E-15 6.2 gi_394933887, BAM29295.1, Zen 1 [Dermatophagoides farinae] 59 1.47E-09 67 10 511409 5.4E-05 6.2 gi_209734584, ACI68161.1, Caspase-14 precursor [Salmo salar] 76 7.37E-75 246 11 193909 1.4E-04 6.1 gi_209732928, ACI67333.1, NADH dehydrogenase 1 alpha subcomplex subunit 9, mitochondrial 98 1.37E-159 473 precursor [Salmo salar] >gi_223647086, ACN10301.1, NADH dehydrogenase 1 alpha subcomplex subunit 9, mitochondrial precursor [Salmo salar] >gi_223672959, ACN12661.1, NADH dehydrogenase 1 alpha subcomplex subunit 9, mitochondrial precursor [Salmo salar] 12 592962 3.8E-08 5.9 gi_6755574, NP_035544.1, antileukoproteinase precursor [Mus musculus] >gi_2829839, P97430.1, 100 4.05E-100 297 SLPI_MOUSE RecName: Full=Antileukoproteinase; Short=ALP; AltName: Full=Secretory leukocyte protease inhibitor; Flags: Precursor >gi_6606529, AAF19194.1, AF205374_1 secretory leukocyte protease inhibitor [Mus musculus] >gi_1763263, AAC53047.1, secretory leukocyte protease inhibitor [Mus musculus] >gi_1945383, AAC53140.1, secretory leukocyte protease inhibitor [Mus musculus] >gi_1945451, AAC53394.1, secretory leukoprotease inhibitor [Mus musculus] >gi_4100899, AAD09307.1, secretory leukoprotease inhibitor [Mus musculus] >gi_20306996, AAH28509.1, Secretory leukocyte peptidase inhibitor [Mus musculus] >gi_148674431, EDL06378.1, secretory leukocyte peptidase inhibitor, isoform CRA_a [Mus musculus] >gi_148674432, EDL06379.1, secretory leukocyte peptidase inhibitor, isoform CRA_a [Mus musculus] 13 41925 6.2E-05 5.9 gi_209737600, ACI69669.1, Caspase-14 precursor [Salmo salar] 76 1.21E-71 237 14 217197 2.3E-13 5.8 gi_83282445, XP_729774.1, hypothetical protein [Plasmodium yoelii yoelii 17XNL] >gi_23488517, 57 7.23E-13 74 EAA21339.1, hypothetical protein [Plasmodium yoelii yoelii] AC gill Expression BLASTX alignment Count Contig ID P Log2(ER) Sequence description % ID E-Value Score 15 413286 2.4E-11 5.7 gi_156352243, XP_001622673.1, predicted protein [Nematostella vectensis] >gi_156209261, 76 7.38E-09 63 EDO30573.1, predicted protein [Nematostella vectensis] 16 192325 3.8E-04 5.4 gi_410896384, XP_003961679.1, PREDICTED: splicing factor 3B subunit 1-like [Takifugu rubripes] 96 < 1.0E-180 2183 17 590957 1.9E-02 5.4 gi_402869608, XP_003898844.1, PREDICTED: immunoglobulin J chain isoform 1 [Papio anubis] 83 1.73E-56 142 18 563373 2.0E-05 5.4 gi_348525450, XP_003450235.1, PREDICTED: hypothetical protein LOC100694880 [Oreochromis 68 2.61E-52 198 niloticus] 19 522943 1.9E-05 5.4 gi_348500316, XP_003437719.1, PREDICTED: protein LSM14 homolog A-like [Oreochromis niloticus] 77 2.03E-131 424 20 201288 < 1.0E-15 5.4 gi_327287605, XP_003228519.1, PREDICTED: putative adenosylhomocysteinase 3-like [Anolis 97 5.22E-60 220 carolinensis] 21 684033 7.4E-04 5.3 gi_348531282, XP_003453139.1, PREDICTED: pecanex-like protein C14orf135 homolog [Oreochromis 82 < 1.0E-180 722 niloticus] 22 640643 4.8E-05 5.3 gi_229366190, ACQ58075.1, Kallikrein-8 precursor [Anoplopoma fimbria] 50 1.15E-26 89 23 547655 1.7E-02 5.2 gi_148725645, CAN87719.1, novel protein (zgc:91911) [Danio rerio] 98 2.74E-107 327 24 642187 8.1E-03 5.1 gi_410920215, XP_003973579.1, PREDICTED: cell division cycle-associated protein 7-like [Takifugu 70 2.25E-130 394 rubripes] 25 480417 2.5E-03 5.1 gi_357483895, XP_003612234.1, ATP synthase subunit a chloroplastic [Medicago truncatula] 78 5.52E-07 56 >gi_355513569, AES95192.1, ATP synthase subunit a chloroplastic [Medicago truncatula] 26 480420 5.7E-04 4.9 gi_390362987, XP_788663.3, PREDICTED: histamine H3 receptor-like [Strongylocentrotus purpuratus] 65 4.34E-06 54 27 50943 1.2E-02 4.9 gi_259089145, NP_001158610.1, deoxycytidine kinase [Oncorhynchus mykiss] >gi_225705244, 100 2.74E-88 278 ACO08468.1, Deoxycytidine kinase [Oncorhynchus mykiss] 28 60409 1.6E-03 4.9 gi_16549028, CAC82808.1, inducible nitric oxide synthase [Oncorhynchus mykiss] 98 < 1.0E-180 1453 29 89387 1.3E-13 4.9 gi_157278121, NP_001098159.1, transcription factor C-MYB [Oryzias latipes] >gi_40714443, 73 < 1.0E-180 669 BAD06940.1, transcription factor C-MYB [Oryzias latipes] 30 286882 2.9E-03 4.7 gi_260794874, XP_002592432.1, hypothetical protein BRAFLDRAFT_67299 [Branchiostoma floridae] 66 4.18E-04 53 >gi_229277651, EEN48443.1, hypothetical protein BRAFLDRAFT_67299 [Branchiostoma floridae] 31 561397 1.8E-02 4.7 gi_113678175, NP_001038335.1, uncharacterized protein LOC558619 precursor [Danio rerio] 45 5.50E-15 82 >gi_94732333, CAK11037.1, novel protein [Danio rerio] 32 354384 1.5E-06 4.6 gi_303227986, NP_001037801.3, chromosome transmission fidelity protein 8 homolog [Danio rerio] 89 8.39E-43 132 >gi_94733486, CAK04527.1, novel protein [Danio rerio] >gi_213624828, AAI71641.1, Si:ch211-218c6.5 protein [Danio rerio] 33 496824 6.0E-04 4.4 gi_85679686, ABC72122.1, myeloperoxidase [Siniperca chuatsi] 84 < 1.0E-180 1111 34 645707 2.3E-03 4.4 gi_189530913, XP_001339622.2, PREDICTED: hypothetical protein LOC799244 [Danio rerio] 83 < 1.0E-180 653 35 60206 8.2E-05 4.3 gi_225706360, ACO09026.1, Ubiquitin-conjugating enzyme E2 G1 [Osmerus mordax] 98 7.71E-104 332 36 677559 1.0E-02 4.2 gi_410896740, XP_003961857.1, PREDICTED: discoidin, CUB and LCCL domain-containing protein 2- 79 < 1.0E-180 870 like [Takifugu rubripes] AC gill Expression BLASTX alignment Count Contig ID P Log2(ER) Sequence description % ID E-Value Score 37 496803 9.2E-09 4.1 gi_224613258, ACN60208.1, Myeloperoxidase precursor [Salmo salar] 86 1.46E-168 511 38 707813 1.6E-03 4.1 gi_222527286, YP_002571757.1, laminin G, sub domain 2 [Chloroflexus sp. Y-400-fl] >gi_222451165, 40 1.52E-29 136 ACM55431.1, laminin G, sub domain 2 [Chloroflexus sp. Y-400-fl] 39 588379 2.5E-02 4.1 gi_212656619, ACJ36222.1, forkhead box P1b [Ctenopharyngodon idella] 89 < 1.0E-180 716 40 201196 < 1.0E-15 4.1 gi_209736498, ACI69118.1, Transmembrane and TPR repeat-containing protein 4 [Salmo salar] 77 1.21E-18 93 41 201257 < 1.0E-15 3.9 gi_355560983, EHH17669.1, hypothetical protein EGK_14124, partial [Macaca mulatta] 91 < 1.0E-180 586 42 524561 1.9E-02 3.9 gi_348506772, XP_003440931.1, PREDICTED: 2-oxoglutarate receptor 1-like [Oreochromis niloticus] 79 1.03E-119 365 43 586375 4.5E-03 3.8 gi_94732587, CAK05072.1, novel protein similar to vertebrate potassium inwardly-rectifying channel, 98 9.26E-83 263 subfamily J, member 3 (KCNJ3) [Danio rerio] 44 497949 3.2E-05 3.8 gi_348503347, XP_003439226.1, PREDICTED: enhancer of polycomb homolog 1-like [Oreochromis 71 3.34E-78 175 niloticus] 45 666299 5.2E-02 3.7 gi_225716736, ACO14214.1, HRAS-like suppressor 2 [Esox lucius] 55 1.90E-22 102 46 277922 3.8E-02 3.6 gi_225716830, ACO14261.1, CD209 antigen-like protein A [Esox lucius] 68 1.33E-34 136 47 90802 1.6E-06 3.4 gi_410903199, XP_003965081.1, PREDICTED: keratin, type I cytoskeletal 50 kDa-like [Takifugu 84 2.73E-81 195 rubripes] 48 151768 3.3E-02 3.4 gi_308210828, NP_001184098.1, kallikrein-4 precursor [Canis lupus familiaris] >gi_307827342, 47 2.41E-16 84 ADN94676.1, kallikrein-related peptidase 4 precursor [Canis lupus familiaris] 49 754898 9.5E-03 3.4 gi_255982777, CAP08938.1, fish virus induced TRIM protein [Oncorhynchus mykiss] 80 1.67E-116 364 50 617198 9.5E-05 3.3 gi_348517672, XP_003446357.1, PREDICTED: pumilio homolog 2 isoform 1 [Oreochromis niloticus] 91 < 1.0E-180 923 51 584736 3.3E-03 3.3 gi_213514156, NP_001134448.1, E3 ubiquitin-protein ligase RNF138 [Salmo salar] >gi_209733384, 83 6.07E-46 165 ACI67561.1, E3 ubiquitin-protein ligase RNF138 [Salmo salar] 52 316923 2.3E-10 3.2 gi_326677981, XP_002666131.2, PREDICTED: hypothetical protein LOC100331949 [Danio rerio] 57 5.12E-06 57 53 2452 1.6E-13 3.2 gi_292658798, NP_001167620.1, cytochrome P450, family 1, subfamily B, polypeptide 1 [Oncorhynchus 98 < 1.0E-180 1072 mykiss] >gi_290576814, ADD51159.1, cytochrome P450 family 1 subfamily B polypeptide 1 [Oncorhynchus mykiss] 54 338934 1.1E-12 3.1 gi_76153175, AAX24831.2,
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